PDB_ID_chain stringlengths 6 10 | PDB_ID stringlengths 4 4 | Title stringlengths 4 230 | Mutation(s) stringclasses 2
values | Classification stringclasses 305
values | Deposit_date stringdate 1976-03-17 00:00:00 2026-01-20 00:00:00 | Release_date stringdate 1976-05-19 00:00:00 2026-02-25 00:00:00 | Method stringclasses 5
values | Resolution stringclasses 459
values | R_free stringclasses 227
values | R_work stringclasses 211
values | PMID stringlengths 4 8 | DOI stringlengths 4 68 | Model_index int64 0 76 | Asym_ID_type stringclasses 2
values | Ab_type stringclasses 30
values | H_subgroup stringclasses 8
values | L_subgroup stringclasses 19
values | H_chain_ID stringclasses 60
values | L_chain_ID stringclasses 58
values | H_fas_seq stringlengths 4 919 | L_fas_seq stringlengths 4 627 | H_filled_pdb_seq stringlengths 4 896 | L_filled_pdb_seq stringlengths 4 523 | H_mean_radius float64 0 79.7 | L_mean_radius float64 0 84.3 | H_fas_seq_len int64 0 919 | L_fas_seq_len int64 0 627 | H_pdb_seq_len int64 0 879 | L_pdb_seq_len int64 0 523 | H_filled_seq_len int64 0 896 | L_filled_seq_len int64 0 523 | HL_inf_res_num int64 0 175 | H_mol_name stringlengths 2 331 | L_mol_name stringlengths 2 151 | H_species stringclasses 68
values | L_species stringclasses 42
values | Ag_chain_ID(s) stringclasses 279
values | Ag_type(s) stringclasses 16
values | Ag_mol_name(s) stringlengths 2 390 | Ag_species stringclasses 743
values | Ab_ag_inf_res_num stringlengths 1 11 | CDR_inf_res_num stringclasses 444
values | CDR_inf_res_ratio stringlengths 1 19 | hl_label stringclasses 3
values | split stringclasses 1
value |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
8c9x_F | 8c9x | human alpha7 nicotinic receptor in complex with the c4 nanobody | no | membrane protein | 2023-01-23 | 2023-10-11 | electron microscopy | 2.3 | N.A. | N.A. | 37749098 | 10.1038/s41467-023-41734-4 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | AQVQLVESGGGLVQAGGSLKLSCAASGFTFAHYAMVWFRQAPGKEREFVAGISWSGASTYYASSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYVAAARFGVGVDDDYSYWGQGTQVTVSSAAEQKLISEEDLNGAAHHHHHHGS | N.A. | QVQLVESGGGLVQAGGSLKLSCAASGFTFAHYAMVWFRQAPGKEREFVAGISWSGASTYYASSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYVAAARFGVGVDDDYSYWGQGTQVTV | N.A. | 13.310658 | 0 | 147 | 0 | 120 | 0 | 120 | 0 | 0 | nanobody c4 | N.A. | vicugna pacos huacaya | N.A. | A;B | protein;protein | neuronal acetylcholine receptor subunit alpha-7;neuronal acetylcholine receptor subunit alpha-7 | homo sapiens;homo sapiens | 29;14 | 15;8 | 0.94;1.0 | H_only | train |
8c9x_J | 8c9x | human alpha7 nicotinic receptor in complex with the c4 nanobody | no | membrane protein | 2023-01-23 | 2023-10-11 | electron microscopy | 2.3 | N.A. | N.A. | 37749098 | 10.1038/s41467-023-41734-4 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | J | N.A. | AQVQLVESGGGLVQAGGSLKLSCAASGFTFAHYAMVWFRQAPGKEREFVAGISWSGASTYYASSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYVAAARFGVGVDDDYSYWGQGTQVTVSSAAEQKLISEEDLNGAAHHHHHHGS | N.A. | QVQLVESGGGLVQAGGSLKLSCAASGFTFAHYAMVWFRQAPGKEREFVAGISWSGASTYYASSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYVAAARFGVGVDDDYSYWGQGTQVTV | N.A. | 13.310643 | 0 | 147 | 0 | 120 | 0 | 120 | 0 | 0 | nanobody c4 | N.A. | vicugna pacos huacaya | N.A. | A;E | protein;protein | neuronal acetylcholine receptor subunit alpha-7;neuronal acetylcholine receptor subunit alpha-7 | homo sapiens;homo sapiens | 15;27 | 8;14 | 0.89;0.93 | H_only | train |
8c9x_G | 8c9x | human alpha7 nicotinic receptor in complex with the c4 nanobody | no | membrane protein | 2023-01-23 | 2023-10-11 | electron microscopy | 2.3 | N.A. | N.A. | 37749098 | 10.1038/s41467-023-41734-4 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | G | N.A. | AQVQLVESGGGLVQAGGSLKLSCAASGFTFAHYAMVWFRQAPGKEREFVAGISWSGASTYYASSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYVAAARFGVGVDDDYSYWGQGTQVTVSSAAEQKLISEEDLNGAAHHHHHHGS | N.A. | QVQLVESGGGLVQAGGSLKLSCAASGFTFAHYAMVWFRQAPGKEREFVAGISWSGASTYYASSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYVAAARFGVGVDDDYSYWGQGTQVTV | N.A. | 13.310663 | 0 | 147 | 0 | 120 | 0 | 120 | 0 | 0 | nanobody c4 | N.A. | vicugna pacos huacaya | N.A. | B;C | protein;protein | neuronal acetylcholine receptor subunit alpha-7;neuronal acetylcholine receptor subunit alpha-7 | homo sapiens;homo sapiens | 29;15 | 15;8 | 0.94;0.89 | H_only | train |
8c9x_H | 8c9x | human alpha7 nicotinic receptor in complex with the c4 nanobody | no | membrane protein | 2023-01-23 | 2023-10-11 | electron microscopy | 2.3 | N.A. | N.A. | 37749098 | 10.1038/s41467-023-41734-4 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | H | N.A. | AQVQLVESGGGLVQAGGSLKLSCAASGFTFAHYAMVWFRQAPGKEREFVAGISWSGASTYYASSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYVAAARFGVGVDDDYSYWGQGTQVTVSSAAEQKLISEEDLNGAAHHHHHHGS | N.A. | QVQLVESGGGLVQAGGSLKLSCAASGFTFAHYAMVWFRQAPGKEREFVAGISWSGASTYYASSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYVAAARFGVGVDDDYSYWGQGTQVTV | N.A. | 13.310637 | 0 | 147 | 0 | 120 | 0 | 120 | 0 | 0 | nanobody c4 | N.A. | vicugna pacos huacaya | N.A. | C;D | protein;protein | neuronal acetylcholine receptor subunit alpha-7;neuronal acetylcholine receptor subunit alpha-7 | homo sapiens;homo sapiens | 29;18 | 15;10 | 0.94;0.91 | H_only | train |
8c9x_I | 8c9x | human alpha7 nicotinic receptor in complex with the c4 nanobody | no | membrane protein | 2023-01-23 | 2023-10-11 | electron microscopy | 2.3 | N.A. | N.A. | 37749098 | 10.1038/s41467-023-41734-4 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | I | N.A. | AQVQLVESGGGLVQAGGSLKLSCAASGFTFAHYAMVWFRQAPGKEREFVAGISWSGASTYYASSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYVAAARFGVGVDDDYSYWGQGTQVTVSSAAEQKLISEEDLNGAAHHHHHHGS | N.A. | QVQLVESGGGLVQAGGSLKLSCAASGFTFAHYAMVWFRQAPGKEREFVAGISWSGASTYYASSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYVAAARFGVGVDDDYSYWGQGTQVTV | N.A. | 13.310638 | 0 | 147 | 0 | 120 | 0 | 120 | 0 | 0 | nanobody c4 | N.A. | vicugna pacos huacaya | N.A. | D;E | protein;protein | neuronal acetylcholine receptor subunit alpha-7;neuronal acetylcholine receptor subunit alpha-7 | homo sapiens;homo sapiens | 26;16 | 14;8 | 0.93;0.89 | H_only | train |
8caf_D_C | 8caf | n8c_fab3b in complex with nedd8-cul1(whb) | no | cell cycle | 2023-01-24 | 2023-09-13 | x-ray diffraction | 2.66 | 0.263 | 0.217 | 37653169 | 10.1038/s41589-023-01392-5 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | D | C | EVQLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVASISSSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARDPFGWAAHGVGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSYSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | EVQLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVASISSSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARDPFGWAAHGVGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVE | IQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSYSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 21.405432 | 22.770515 | 223 | 211 | 215 | 210 | 222 | 210 | 95 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | E;G | protein;protein | cullin-1;nedd8 | homo sapiens;homo sapiens | 41;15 | 20;7 | 0.87;1.0 | HL | train |
8caf_B_A | 8caf | n8c_fab3b in complex with nedd8-cul1(whb) | no | cell cycle | 2023-01-24 | 2023-09-13 | x-ray diffraction | 2.66 | 0.263 | 0.217 | 37653169 | 10.1038/s41589-023-01392-5 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | B | A | EVQLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVASISSSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARDPFGWAAHGVGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSYSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | EVQLVESGGGLVQPGGSLRLSCAASGFNFSSSSIHWVRQAPGKGLEWVASISSSYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARDPFGWAAHGVGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSYSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 20.79971 | 23.077751 | 223 | 211 | 216 | 211 | 223 | 211 | 96 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | H;F | protein;protein | cullin-1;nedd8 | homo sapiens;homo sapiens | 36;16 | 17;7 | 0.89;1.0 | HL | train |
8fxc_H_L | 8fxc | sars-cov-2 bq.1.1 spike rbd bound to the human ace2 ectodomain and the s309 neutralizing antibody fab fragment | no | viral protein/immune system | 2023-01-24 | 2023-10-04 | electron microscopy | 3.2 | N.A. | N.A. | 37648855 | 10.1038/s41586-023-06487-6 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | H | L | QVQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYMELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLAGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLH... | EIVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQHDTSLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYMELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTV | IVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQHDTSLTFGGGTKV | 13.974882 | 12.776258 | 457 | 214 | 124 | 103 | 124 | 103 | 38 | s309 heavy chain | s309 light chain | homo sapiens | homo sapiens | E | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 40 | 16 | 0.84 | HL | train |
8cau_F | 8cau | human alpha7 nicotinic receptor in complex with the c4 nanobody and nicotine | no | membrane protein | 2023-01-24 | 2023-10-11 | electron microscopy | 3.4 | N.A. | N.A. | 37749098 | 10.1038/s41467-023-41734-4 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | AQVQLVESGGGLVQAGGSLKLSCAASGFTFAHYAMVWFRQAPGKEREFVAGISWSGASTYYASSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYVAAARFGVGVDDDYSYWGQGTQVTVSSAAEQKLISEEDLNGAAHHHHHHGS | N.A. | AQVQLVESGGGLVQAGGSLKLSCAASGFTFAHYAMVWFRQAPGKEREFVAGISWSGASTYYASSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYVAAARFGVGVDDDYSYWGQGTQVTV | N.A. | 13.734417 | 0 | 147 | 0 | 121 | 0 | 121 | 0 | 0 | nanobody c4 | N.A. | vicugna pacos | N.A. | A;B | protein;protein | neuronal acetylcholine receptor subunit alpha-7;neuronal acetylcholine receptor subunit alpha-7 | homo sapiens;homo sapiens | 26;12 | 13;8 | 0.93;1.0 | H_only | train |
8cau_J | 8cau | human alpha7 nicotinic receptor in complex with the c4 nanobody and nicotine | no | membrane protein | 2023-01-24 | 2023-10-11 | electron microscopy | 3.4 | N.A. | N.A. | 37749098 | 10.1038/s41467-023-41734-4 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | J | N.A. | AQVQLVESGGGLVQAGGSLKLSCAASGFTFAHYAMVWFRQAPGKEREFVAGISWSGASTYYASSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYVAAARFGVGVDDDYSYWGQGTQVTVSSAAEQKLISEEDLNGAAHHHHHHGS | N.A. | AQVQLVESGGGLVQAGGSLKLSCAASGFTFAHYAMVWFRQAPGKEREFVAGISWSGASTYYASSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYVAAARFGVGVDDDYSYWGQGTQVTV | N.A. | 13.719996 | 0 | 147 | 0 | 121 | 0 | 121 | 0 | 0 | nanobody c4 | N.A. | vicugna pacos | N.A. | A;E | protein;protein | neuronal acetylcholine receptor subunit alpha-7;neuronal acetylcholine receptor subunit alpha-7 | homo sapiens;homo sapiens | 11;26 | 7;13 | 1.0;0.93 | H_only | train |
8cau_G | 8cau | human alpha7 nicotinic receptor in complex with the c4 nanobody and nicotine | no | membrane protein | 2023-01-24 | 2023-10-11 | electron microscopy | 3.4 | N.A. | N.A. | 37749098 | 10.1038/s41467-023-41734-4 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | G | N.A. | AQVQLVESGGGLVQAGGSLKLSCAASGFTFAHYAMVWFRQAPGKEREFVAGISWSGASTYYASSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYVAAARFGVGVDDDYSYWGQGTQVTVSSAAEQKLISEEDLNGAAHHHHHHGS | N.A. | AQVQLVESGGGLVQAGGSLKLSCAASGFTFAHYAMVWFRQAPGKEREFVAGISWSGASTYYASSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYVAAARFGVGVDDDYSYWGQGTQVTV | N.A. | 13.725865 | 0 | 147 | 0 | 121 | 0 | 121 | 0 | 0 | nanobody c4 | N.A. | vicugna pacos | N.A. | B;C | protein;protein | neuronal acetylcholine receptor subunit alpha-7;neuronal acetylcholine receptor subunit alpha-7 | homo sapiens;homo sapiens | 26;12 | 13;8 | 0.93;1.0 | H_only | train |
8cau_H | 8cau | human alpha7 nicotinic receptor in complex with the c4 nanobody and nicotine | no | membrane protein | 2023-01-24 | 2023-10-11 | electron microscopy | 3.4 | N.A. | N.A. | 37749098 | 10.1038/s41467-023-41734-4 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | H | N.A. | AQVQLVESGGGLVQAGGSLKLSCAASGFTFAHYAMVWFRQAPGKEREFVAGISWSGASTYYASSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYVAAARFGVGVDDDYSYWGQGTQVTVSSAAEQKLISEEDLNGAAHHHHHHGS | N.A. | AQVQLVESGGGLVQAGGSLKLSCAASGFTFAHYAMVWFRQAPGKEREFVAGISWSGASTYYASSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYVAAARFGVGVDDDYSYWGQGTQVTV | N.A. | 13.729319 | 0 | 147 | 0 | 121 | 0 | 121 | 0 | 0 | nanobody c4 | N.A. | vicugna pacos | N.A. | C;D | protein;protein | neuronal acetylcholine receptor subunit alpha-7;neuronal acetylcholine receptor subunit alpha-7 | homo sapiens;homo sapiens | 26;10 | 13;7 | 0.93;1.0 | H_only | train |
8cau_I | 8cau | human alpha7 nicotinic receptor in complex with the c4 nanobody and nicotine | no | membrane protein | 2023-01-24 | 2023-10-11 | electron microscopy | 3.4 | N.A. | N.A. | 37749098 | 10.1038/s41467-023-41734-4 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | I | N.A. | AQVQLVESGGGLVQAGGSLKLSCAASGFTFAHYAMVWFRQAPGKEREFVAGISWSGASTYYASSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYVAAARFGVGVDDDYSYWGQGTQVTVSSAAEQKLISEEDLNGAAHHHHHHGS | N.A. | AQVQLVESGGGLVQAGGSLKLSCAASGFTFAHYAMVWFRQAPGKEREFVAGISWSGASTYYASSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYVAAARFGVGVDDDYSYWGQGTQVTV | N.A. | 13.717917 | 0 | 147 | 0 | 121 | 0 | 121 | 0 | 0 | nanobody c4 | N.A. | vicugna pacos | N.A. | D;E | protein;protein | neuronal acetylcholine receptor subunit alpha-7;neuronal acetylcholine receptor subunit alpha-7 | homo sapiens;homo sapiens | 26;12 | 13;8 | 0.93;1.0 | H_only | train |
8fxj_H_L | 8fxj | crystal structure of fab460 | no | immune system | 2023-01-24 | 2023-10-11 | x-ray diffraction | 2 | 0.194 | 0.167 | 37940661 | 10.1038/s41467-023-42097-6 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | H | L | EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYFCTRSRGYFGNYYFDYWGQGTTLTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD | QIVLTQSPAVMSASPGERVTMTCSASSSVSYMYWYQQKPRSSPKPWIYLTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAATYYCQQWSSIPLTFGAGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECE | EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNTKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYFCTRSRGYFGNYYFDYWGQGTTLTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | QIVLTQSPAVMSASPGERVTMTCSASSSVSYMYWYQQKPRSSPKPWIYLTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAATYYCQQWSSIPLTFGAGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.262075 | 23.306921 | 225 | 214 | 224 | 212 | 224 | 212 | 105 | fab460, heavy chain | fab460, light chain | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8i5h_B_C | 8i5h | crystal structure of sars-cov-2 delta variant spike receptor-binding domain (rbd) in complex with ncv2sg48 fab | yes | viral protein/immune system | 2023-01-25 | 2023-04-19 | x-ray diffraction | 2.38 | 0.23 | 0.188 | 37041231 | 10.1038/s42003-023-04782-6 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | B | C | EVQLVESGGGLIQPGGSLRLSCAASGFIVSRNYMNWVRQAPGKGLEWVALIYSGGSTFYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDLVVYGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTGHHHHHH | AIQLTQSPSSLSASVGDRVTITCRASQGISSHLAWYQQKPGKAPKLLIFAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQHLNSNPPITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLIQPGGSLRLSCAASGFIVSRNYMNWVRQAPGKGLEWVALIYSGGSTFYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDLVVYGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | AIQLTQSPSSLSASVGDRVTITCRASQGISSHLAWYQQKPGKAPKLLIFAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQHLNSNPPITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 20.725004 | 23.323912 | 230 | 215 | 211 | 214 | 217 | 214 | 92 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 70 | 23 | 0.66 | HL | train |
8i5h_E_F | 8i5h | crystal structure of sars-cov-2 delta variant spike receptor-binding domain (rbd) in complex with ncv2sg48 fab | yes | viral protein/immune system | 2023-01-25 | 2023-04-19 | x-ray diffraction | 2.38 | 0.23 | 0.188 | 37041231 | 10.1038/s42003-023-04782-6 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | E | F | EVQLVESGGGLIQPGGSLRLSCAASGFIVSRNYMNWVRQAPGKGLEWVALIYSGGSTFYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDLVVYGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTGHHHHHH | AIQLTQSPSSLSASVGDRVTITCRASQGISSHLAWYQQKPGKAPKLLIFAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQHLNSNPPITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLIQPGGSLRLSCAASGFIVSRNYMNWVRQAPGKGLEWVALIYSGGSTFYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDLVVYGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | AIQLTQSPSSLSASVGDRVTITCRASQGISSHLAWYQQKPGKAPKLLIFAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQHLNSNPPITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.52874 | 22.726816 | 230 | 215 | 211 | 214 | 217 | 214 | 90 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | D | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 72 | 25 | 0.71 | HL | train |
8i5h_H_L | 8i5h | crystal structure of sars-cov-2 delta variant spike receptor-binding domain (rbd) in complex with ncv2sg48 fab | yes | viral protein/immune system | 2023-01-25 | 2023-04-19 | x-ray diffraction | 2.38 | 0.23 | 0.188 | 37041231 | 10.1038/s42003-023-04782-6 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EVQLVESGGGLIQPGGSLRLSCAASGFIVSRNYMNWVRQAPGKGLEWVALIYSGGSTFYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDLVVYGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTGHHHHHH | AIQLTQSPSSLSASVGDRVTITCRASQGISSHLAWYQQKPGKAPKLLIFAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQHLNSNPPITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLIQPGGSLRLSCAASGFIVSRNYMNWVRQAPGKGLEWVALIYSGGSTFYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDLVVYGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | AIQLTQSPSSLSASVGDRVTITCRASQGISSHLAWYQQKPGKAPKLLIFAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQHLNSNPPITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 20.567955 | 23.369497 | 230 | 215 | 213 | 214 | 217 | 214 | 92 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | R | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 71 | 24 | 0.69 | HL | train |
8i5i_H_L | 8i5i | crystal structure of sars-cov-2 delta variant spike receptor-binding domain (rbd) in complex with ncv2sg53 fab | yes | viral protein/immune system | 2023-01-25 | 2023-04-19 | x-ray diffraction | 3.06 | 0.372 | 0.228 | 37041231 | 10.1038/s42003-023-04782-6 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | QVQMVESGGGLVRPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWISYISSSGSSMNYADSVKGRFTISRDNAKNSLFLQMNSLRAEDTAVYYCAREFDLTKIIMVPPYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK | AIQLTQSPSSLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKVLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQLKSYPLTFGGGTKVEITRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQMVESGGGLVRPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWISYISSSGSSMNYADSVKGRFTISRDNAKNSLFLQMNSLRAEDTAVYYCAREFDLTKIIMVPPYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | AIQLTQSPSSLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKVLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQLKSYPLTFGGGTKVEITRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 20.73657 | 23.411333 | 227 | 214 | 218 | 213 | 223 | 213 | 98 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | R | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 45 | 21 | 0.84 | HL | train |
8fxv_B | 8fxv | crystal structure of human protgf-beta2 in complex with nb18 | yes | cytokine | 2023-01-25 | 2023-06-21 | x-ray diffraction | 2.2 | 0.249 | 0.227 | 37279271 | 10.1073/pnas.2304874120 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGYISNDDVMGWYRQAPGKEREFVAAISVGASTNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAQSEGGYWFGYWGQGTQVTVSSHHHHHH | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGYISNDDVMGWYRQAPGKEREFVAAISVGASTNYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAQSEGGYWFGYWGQGTQVTVS | N.A. | 13.453213 | 0 | 124 | 0 | 116 | 0 | 117 | 0 | 0 | nanobody clone 18 | N.A. | synthetic construct | N.A. | A | protein | transforming growth factor beta-2 proprotein | homo sapiens | 49 | 14 | 0.56 | H_only | train |
8cbd_E_F | 8cbd | sars-cov-2 delta-rbd complexed with ba.4/5-1 and ey6a fabs | yes | viral protein | 2023-01-25 | 2024-02-07 | x-ray diffraction | 3.52 | 0.266 | 0.218 | 38627386 | 10.1038/s41467-024-47393-3 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | E | F | EVQLVESGGGVVQPGRSLRLSCAASAFTFSSYDMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDGGKLWVYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTLALTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGVVQPGRSLRLSCAASAFTFSSYDMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDGGKLWVYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTLALTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 21.956747 | 22.653803 | 226 | 215 | 214 | 212 | 221 | 212 | 96 | ey6a heavy chain | ey6a light chain | homo sapiens | homo sapiens | R | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 53 | 21 | 0.78 | HL | train |
8cbd_H_L | 8cbd | sars-cov-2 delta-rbd complexed with ba.4/5-1 and ey6a fabs | yes | viral protein | 2023-01-25 | 2024-02-07 | x-ray diffraction | 3.52 | 0.266 | 0.218 | 38627386 | 10.1038/s41467-024-47393-3 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | H | L | QVQLQESGPGLVKPSETLSLTCTVSGGSISSSNYYWGWIRQPPGKGLEWIGSIYYSGSSYYSPSLKSRVTISVDTSKSQFSLKLSSVTAADTAVYYCASTLGATFYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | DIQLTQSPSSLSASVGDKVTITCRASQGISNSLAWYQQNPGKAPKLLLYTASTLESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYYDTWYTFGQGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQESGPGLVKPSETLSLTCTVSGGSISSSNYYWGWIRQPPGKGLEWIGSIYYSGSSYYSPSLKSRVTISVDTSKSQFSLKLSSVTAADTAVYYCASTLGATFYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | DIQLTQSPSSLSASVGDKVTITCRASQGISNSLAWYQQNPGKAPKLLLYTASTLESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYYDTWYTFGQGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.841436 | 22.318378 | 222 | 214 | 216 | 213 | 220 | 213 | 96 | ba.4/5-1 heavy chain | ba.4/5-1 light chain | homo sapiens | homo sapiens | R | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 67 | 23 | 0.7 | HL | train |
8cbd_A_B | 8cbd | sars-cov-2 delta-rbd complexed with ba.4/5-1 and ey6a fabs | yes | viral protein | 2023-01-25 | 2024-02-07 | x-ray diffraction | 3.52 | 0.266 | 0.218 | 38627386 | 10.1038/s41467-024-47393-3 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | A | B | QVQLQESGPGLVKPSETLSLTCTVSGGSISSSNYYWGWIRQPPGKGLEWIGSIYYSGSSYYSPSLKSRVTISVDTSKSQFSLKLSSVTAADTAVYYCASTLGATFYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | DIQLTQSPSSLSASVGDKVTITCRASQGISNSLAWYQQNPGKAPKLLLYTASTLESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYYDTWYTFGQGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQESGPGLVKPSETLSLTCTVSGGSISSSNYYWGWIRQPPGKGLEWIGSIYYSGSSYYSPSLKSRVTISVDTSKSQFSLKLSSVTAADTAVYYCASTLGATFYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | DIQLTQSPSSLSASVGDKVTITCRASQGISNSLAWYQQNPGKAPKLLLYTASTLESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYYDTWYTFGQGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.937742 | 22.298237 | 222 | 214 | 216 | 213 | 220 | 213 | 96 | ba.4/5-1 heavy chain | ba.4/5-1 light chain | homo sapiens | homo sapiens | X | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 64 | 23 | 0.74 | HL | train |
8cbd_J_K | 8cbd | sars-cov-2 delta-rbd complexed with ba.4/5-1 and ey6a fabs | yes | viral protein | 2023-01-25 | 2024-02-07 | x-ray diffraction | 3.52 | 0.266 | 0.218 | 38627386 | 10.1038/s41467-024-47393-3 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | J | K | EVQLVESGGGVVQPGRSLRLSCAASAFTFSSYDMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDGGKLWVYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTLALTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGVVQPGRSLRLSCAASAFTFSSYDMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDGGKLWVYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTLALTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 22.3177 | 22.755457 | 226 | 215 | 214 | 212 | 221 | 212 | 99 | ey6a heavy chain | ey6a light chain | homo sapiens | homo sapiens | X | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 54 | 21 | 0.78 | HL | train |
8cbd_C_D | 8cbd | sars-cov-2 delta-rbd complexed with ba.4/5-1 and ey6a fabs | yes | viral protein | 2023-01-25 | 2024-02-07 | x-ray diffraction | 3.52 | 0.266 | 0.218 | 38627386 | 10.1038/s41467-024-47393-3 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | C | D | QVQLQESGPGLVKPSETLSLTCTVSGGSISSSNYYWGWIRQPPGKGLEWIGSIYYSGSSYYSPSLKSRVTISVDTSKSQFSLKLSSVTAADTAVYYCASTLGATFYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | DIQLTQSPSSLSASVGDKVTITCRASQGISNSLAWYQQNPGKAPKLLLYTASTLESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYYDTWYTFGQGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQESGPGLVKPSETLSLTCTVSGGSISSSNYYWGWIRQPPGKGLEWIGSIYYSGSSYYSPSLKSRVTISVDTSKSQFSLKLSSVTAADTAVYYCASTLGATFYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | DIQLTQSPSSLSASVGDKVTITCRASQGISNSLAWYQQNPGKAPKLLLYTASTLESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYYDTWYTFGQGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.902052 | 22.241816 | 222 | 214 | 216 | 213 | 220 | 213 | 96 | ba.4/5-1 heavy chain | ba.4/5-1 light chain | homo sapiens | homo sapiens | Y | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 66 | 23 | 0.7 | HL | train |
8cbd_G_I | 8cbd | sars-cov-2 delta-rbd complexed with ba.4/5-1 and ey6a fabs | yes | viral protein | 2023-01-25 | 2024-02-07 | x-ray diffraction | 3.52 | 0.266 | 0.218 | 38627386 | 10.1038/s41467-024-47393-3 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | G | I | EVQLVESGGGVVQPGRSLRLSCAASAFTFSSYDMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDGGKLWVYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTLALTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGVVQPGRSLRLSCAASAFTFSSYDMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKDGGKLWVYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTLALTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 21.760746 | 22.398468 | 226 | 215 | 214 | 212 | 221 | 212 | 99 | ey6a heavy chain | ey6a light chain | homo sapiens | homo sapiens | Y | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 54 | 21 | 0.78 | HL | train |
8cbe_A_B | 8cbe | sars-cov-2 delta-rbd complexed with ba.4/5-2 and beta-49 fabs | yes | viral protein | 2023-01-25 | 2024-02-07 | x-ray diffraction | 3.16 | 0.266 | 0.226 | 38627386 | 10.1038/s41467-024-47393-3 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | A | B | EVQLVQSGAEVKKPGSSVKVSCKASGGTFSSSVISWVRQAPGQGLEWMGGIIPLFGSANYAQKFQGRVTITADESTSTAYMEMTSLRSEDTAVYYCAKVSQWALILFWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK | AIRMTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGTSPSWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVQSGAEVKKPGSSVKVSCKASGGTFSSSVISWVRQAPGQGLEWMGGIIPLFGSANYAQKFQGRVTITADESTSTAYMEMTSLRSEDTAVYYCAKVSQWALILFWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | AIRMTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGTSPSWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 21.67994 | 23.049604 | 223 | 216 | 216 | 216 | 219 | 216 | 103 | beta-49 heavy chain | beta-49 light chain | homo sapiens | homo sapiens | E | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 42 | 18 | 0.78 | HL | train |
8cbe_H_L | 8cbe | sars-cov-2 delta-rbd complexed with ba.4/5-2 and beta-49 fabs | yes | viral protein | 2023-01-25 | 2024-02-07 | x-ray diffraction | 3.16 | 0.266 | 0.226 | 38627386 | 10.1038/s41467-024-47393-3 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | H | L | EVQLVESGGGVVQPGRSLRLSCAASGFTLRSFGIHWVRQAPGKGLEWVAFISYDGSNQYYEDSVKGRFTISRDNSKNTVDLQMNSLSTEDTAVYWCAKDLLPLLALYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | DIVMTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYEASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAAYYCQQRSNFPFIFGPGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGVVQPGRSLRLSCAASGFTLRSFGIHWVRQAPGKGLEWVAFISYDGSNQYYEDSVKGRFTISRDNSKNTVDLQMNSLSTEDTAVYWCAKDLLPLLALYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | DIVMTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYEASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAAYYCQQRSNFPFIFGPGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.871033 | 22.79149 | 228 | 214 | 226 | 213 | 226 | 213 | 107 | ba.4/5-2 heavy chain | ba.4/5-2 light chain | homo sapiens | homo sapiens | E | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 53 | 20 | 0.77 | HL | train |
8cbf_A_B | 8cbf | sars-cov-2 delta-rbd complexed with omi-42 and beta-49 fabs | yes | viral protein | 2023-01-25 | 2024-02-07 | x-ray diffraction | 2.33 | 0.255 | 0.215 | 38627386 | 10.1038/s41467-024-47393-3 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | A | B | EVQLVQSGAEVKKPGSSVKVSCKASGGTFSSSVISWVRQAPGQGLEWMGGIIPLFGSANYAQKFQGRVTITADESTSTAYMEMTSLRSEDTAVYYCAKVSQWALILFWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK | AIRMTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGTSPSWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVQSGAEVKKPGSSVKVSCKASGGTFSSSVISWVRQAPGQGLEWMGGIIPLFGSANYAQKFQGRVTITADESTSTAYMEMTSLRSEDTAVYYCAKVSQWALILFWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | AIRMTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGTSPSWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.746658 | 22.625742 | 223 | 216 | 215 | 216 | 219 | 216 | 103 | beta-49 heavy chain | beta-49 light chain | homo sapiens | homo sapiens | E | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 46 | 17 | 0.71 | HL | train |
8cbf_H_L | 8cbf | sars-cov-2 delta-rbd complexed with omi-42 and beta-49 fabs | yes | viral protein | 2023-01-25 | 2024-02-07 | x-ray diffraction | 2.33 | 0.255 | 0.215 | 38627386 | 10.1038/s41467-024-47393-3 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV2 | H | L | EVQLLETGGGLVQPGRSLRLSCAASGFPFDDYAIHWVRLAPGKGLEWVSSISWDSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKGAFPGYSSGWYYGLDVWGQGATVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | QSVVTQPPSASGSLGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIFEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGNKGVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLLETGGGLVQPGRSLRLSCAASGFPFDDYAIHWVRLAPGKGLEWVSSISWDSGSIGYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAKGAFPGYSSGWYYGLDVWGQGATVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | SVVTQPPSASGSLGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIFEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGNKGVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTE | 20.60071 | 23.56918 | 230 | 215 | 220 | 212 | 226 | 212 | 91 | omi-42 heavy chain | omi-42 light chain | homo sapiens | homo sapiens | E | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 55 | 22 | 0.81 | HL | train |
8cby_H_L | 8cby | crystal structure of anti-cortisol fab in complex with cortisol | no | immune system | 2023-01-26 | 2023-05-10 | x-ray diffraction | 2.27 | 0.23 | 0.202 | 37100101 | 10.1016/j.jsb.2023.107966 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EVQLVESGGGLVKPGGSLKLSCAASGFAFGNYDMSWVRQTPEKRLEWVAFIGSGGGRIYYGDTMKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCTRHYNYYYSMDYWGQGTSVIVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCAAAHHHHHH | DIELTQSPAVMSAFPGEEVTMTCSASSSINYMHWYQQKPGTSPKRWIYDTSKLASGVPARFSGSGSGTSYSLTISSMEAEDAATYYCHQRSIFTFGSGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EVQLVESGGGLVKPGGSLKLSCAASGFAFGNYDMSWVRQTPEKRLEWVAFIGSGGGRIYYGDTMKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCTRHYNYYYSMDYWGQGTSVIVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | DIELTQSPAVMSAFPGEEVTMTCSASSSINYMHWYQQKPGTSPKRWIYDTSKLASGVPARFSGSGSGTSYSLTISSMEAEDAATYYCHQRSIFTFGSGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | 22.735353 | 23.038868 | 230 | 211 | 221 | 211 | 221 | 211 | 100 | anti-cortisol (17) fab (heavy chain) | anti-cortisol (17) fab (light chain) | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8cbz_H_L | 8cbz | crystal structure of anti-cortisol fab in complex with corticosterone | no | immune system | 2023-01-26 | 2023-05-10 | x-ray diffraction | 1.86 | 0.213 | 0.204 | 37100101 | 10.1016/j.jsb.2023.107966 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EVQLVESGGGLVKPGGSLKLSCAASGFAFGNYDMSWVRQTPEKRLEWVAFIGSGGGRIYYGDTMKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCTRHYNYYYSMDYWGQGTSVIVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCAAAHHHHHH | DIELTQSPAVMSAFPGEEVTMTCSASSSINYMHWYQQKPGTSPKRWIYDTSKLASGVPARFSGSGSGTSYSLTISSMEAEDAATYYCHQRSIFTFGSGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EVQLVESGGGLVKPGGSLKLSCAASGFAFGNYDMSWVRQTPEKRLEWVAFIGSGGGRIYYGDTMKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCTRHYNYYYSMDYWGQGTSVIVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | DIELTQSPAVMSAFPGEEVTMTCSASSSINYMHWYQQKPGTSPKRWIYDTSKLASGVPARFSGSGSGTSYSLTISSMEAEDAATYYCHQRSIFTFGSGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | 22.495054 | 22.828339 | 230 | 211 | 221 | 211 | 221 | 211 | 109 | anti-cortisol (17) fab (heavy chain) | anti-cortisol (17) fab (light chain) | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8cc0_H_L | 8cc0 | crystal structure of anti-cortisol fab in complex with cortisone | no | immune system | 2023-01-26 | 2023-05-10 | x-ray diffraction | 1.85 | 0.209 | 0.191 | 37100101 | 10.1016/j.jsb.2023.107966 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EVQLVESGGGLVKPGGSLKLSCAASGFAFGNYDMSWVRQTPEKRLEWVAFIGSGGGRIYYGDTMKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCTRHYNYYYSMDYWGQGTSVIVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCAAAHHHHHH | DIELTQSPAVMSAFPGEEVTMTCSASSSINYMHWYQQKPGTSPKRWIYDTSKLASGVPARFSGSGSGTSYSLTISSMEAEDAATYYCHQRSIFTFGSGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EVQLVESGGGLVKPGGSLKLSCAASGFAFGNYDMSWVRQTPEKRLEWVAFIGSGGGRIYYGDTMKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCTRHYNYYYSMDYWGQGTSVIVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | DIELTQSPAVMSAFPGEEVTMTCSASSSINYMHWYQQKPGTSPKRWIYDTSKLASGVPARFSGSGSGTSYSLTISSMEAEDAATYYCHQRSIFTFGSGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | 22.612692 | 22.93646 | 230 | 211 | 221 | 211 | 221 | 211 | 104 | anti-cortisol (17) fab (heavy chain) | anti-cortisol (17) fab (light chain) | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8cc1_H_L | 8cc1 | crystal structure of anti-cortisol fab in complex with prednisolone | no | immune system | 2023-01-26 | 2023-05-10 | x-ray diffraction | 2 | 0.23 | 0.195 | 37100101 | 10.1016/j.jsb.2023.107966 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EVQLVESGGGLVKPGGSLKLSCAASGFAFGNYDMSWVRQTPEKRLEWVAFIGSGGGRIYYGDTMKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCTRHYNYYYSMDYWGQGTSVIVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCAAAHHHHHH | DIELTQSPAVMSAFPGEEVTMTCSASSSINYMHWYQQKPGTSPKRWIYDTSKLASGVPARFSGSGSGTSYSLTISSMEAEDAATYYCHQRSIFTFGSGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EVQLVESGGGLVKPGGSLKLSCAASGFAFGNYDMSWVRQTPEKRLEWVAFIGSGGGRIYYGDTMKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCTRHYNYYYSMDYWGQGTSVIVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | DIELTQSPAVMSAFPGEEVTMTCSASSSINYMHWYQQKPGTSPKRWIYDTSKLASGVPARFSGSGSGTSYSLTISSMEAEDAATYYCHQRSIFTFGSGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | 22.705439 | 23.030539 | 230 | 211 | 221 | 211 | 221 | 211 | 104 | anti-cortisol (17) fab (heavy chain) | anti-cortisol (17) fab (light chain) | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8fzp_A_B | 8fzp | crystal structure of polyreactive 43g10 mouse fab | no | immune system | 2023-01-29 | 2023-10-18 | x-ray diffraction | 1.63 | 0.245 | 0.224 | 37804505 | 10.1016/j.celrep.2023.113190 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV4 | A | B | QVQLKQSGPGLVKPSQSLSLTCSVTGYSITSGFYWTWIRQFPGNKVEWMGYINYAGNNDYNPSLKDRISITRDTSKNQFFLKLNSVTSEDTATYYCTRGTGRIEYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | DIKMTQSPSSLAVSVGEKVSMSCKSSQSLLYSYNQKNYLAWYQQAPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISNVKTEDLAVYYCQQYHSHPLTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECSRGGLEVLAQ | VQLKQSGPGLVKPSQSLSLTCSVTGYSITSGFYWTWIRQFPGNKVEWMGYINYAGNNDYNPSLKDRISITRDTSKNQFFLKLNSVTSEDTATYYCTRGTGRIEYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | DIKMTQSPSSLAVSVGEKVSMSCKSSQSLLYSYNQKNYLAWYQQAPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISNVKTEDLAVYYCQQYHSHPLTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECSRGGLEVLAQ | 21.248974 | 25.082916 | 224 | 230 | 219 | 230 | 219 | 230 | 109 | 43g10 fab heavy chain | 43g10 fab light chain | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8cd0_C | 8cd0 | human heparan sulfate n-deacetylase-n-sulfotransferase 1 in complex with calcium, 3'-phosphoadenosine-5'-phosphosulfate, and nanobody nab7 (composite map and model) | no | carbohydrate | 2023-01-29 | 2024-02-07 | electron microscopy | 2.42 | N.A. | N.A. | 38351061 | 10.1038/s41467-024-45419-4 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | QVQLVESGGGSVQAGGSLRLSCAASGFNVDDYAIGWFRQSPGKEREGVSCIGGDGTTYYENSVKGRFTVSSDKRDNTVYLQMNNLRPEDTAIYFCAADRSKYCVGKYFSTPSQYDFWGRGTHVTVSSEPKTPKPQPAAGPGGQHHHHHHGAEQKLISEEDLS | N.A. | QVQLVESGGGSVQAGGSLRLSCAASGFNVDDYAIGWFRQSPGKEREGVSCIGGDGTTYYENSVKGRFTVSSDKRDNTVYLQMNNLRPEDTAIYFCAADRSKYCVGKYFSTPSQYDFWGRGTHVTV | N.A. | 13.330879 | 0 | 162 | 0 | 121 | 0 | 125 | 0 | 0 | nanobody nab7 | N.A. | lama glama | N.A. | A | protein | bifunctional heparan sulfate n-deacetylase/n-sulfotransferase 1 | homo sapiens | 38 | 13 | 0.76 | H_only | train |
8cdd_E_D | 8cdd | pfrh5-pfcyrpa-pfripr complex from plasmodium falciparum bound to antibody cy.003 | no | cell adhesion | 2023-01-30 | 2023-10-25 | electron microscopy | 3 | N.A. | N.A. | 38123677 | 10.1038/s41586-023-06856-1 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | E | D | AVTLDESGGGLQTPGGALSLVCKGSGFFSFSSYTMQWVRQAPGKGLEWVASISSGGGTNYGAAVKGRATISRDNGQSTLRLQLNNLRAEDTGTYYCAKHGVNGCDWSYSVGCVDAWGHGTEVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | ALTQPSSVSANPGETVKITCSGGSSSYYGWYQQKSPGSAPVTLIYNNQKRPSDIPSRFSGSKSGSTGTLTITGVQAEDEAVYFCGSRDNSGGIFGAGTTLTVLRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | VTLDESGGGLQTPGGALSLVCKGSGFFSFSSYTMQWVRQAPGKGLEWVASISSGGGTNYGAAVKGRATISRDNGQSTLRLQLNNLRAEDTGTYYCAKHGVNGCDWSYSVGCVDAWGHGTEVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | ALTQPSSVSANPGETVKITCSGGSSSYYGWYQQKSPGSAPVTLIYNNQKRPSDIPSRFSGSKSGSTGTLTITGVQAEDEAVYFCGSRDNSGGIFGAGTTLTVLRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 20.691187 | 22.031479 | 226 | 207 | 214 | 207 | 225 | 207 | 95 | cy.003 heavy chain | cy.003 light chain | gallus gallus | gallus gallus | B | protein | cysteine-rich protective antigen | plasmodium falciparum 3d7 | 45 | 22 | 0.81 | HL | train |
8cde_D_C | 8cde | pfcyrpa-pfripr complex from plasmodium falciparum bound to antibody cy.003 | no | cell adhesion | 2023-01-30 | 2023-10-25 | electron microscopy | 3.1 | N.A. | N.A. | 38123677 | 10.1038/s41586-023-06856-1 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV3 | D | C | AVTLDESGGGLQTPGGALSLVCKGSGFFSFSSYTMQWVRQAPGKGLEWVASISSGGGTNYGAAVKGRATISRDNGQSTLRLQLNNLRAEDTGTYYCAKHGVNGCDWSYSVGCVDAWGHGTEVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | ALTQPSSVSANPGETVKITCSGGSSSYYGWYQQKSPGSAPVTLIYNNQKRPSDIPSRFSGSKSGSTGTLTITGVQAEDEAVYFCGSRDNSGGIFGAGTTLTVLRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | VTLDESGGGLQTPGGALSLVCKGSGFFSFSSYTMQWVRQAPGKGLEWVASISSGGGTNYGAAVKGRATISRDNGQSTLRLQLNNLRAEDTGTYYCAKHGVNGCDWSYSVGCVDAWGHGTEVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | ALTQPSSVSANPGETVKITCSGGSSSYYGWYQQKSPGSAPVTLIYNNQKRPSDIPSRFSGSKSGSTGTLTITGVQAEDEAVYFCGSRDNSGGIFGAGTTLTVLRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 20.689257 | 22.203228 | 226 | 207 | 214 | 207 | 225 | 207 | 100 | cy.003 | cy.003 light chain | gallus gallus | gallus gallus | B | protein | cysteine-rich protective antigen | plasmodium falciparum 3d7 | 38 | 20 | 0.83 | HL | train |
8g05_E | 8g05 | cryo-em structure of an orphan gpcr-gi protein signaling complex | yes | membrane protein | 2023-01-31 | 2023-11-01 | electron microscopy | 3 | N.A. | N.A. | 37709767 | 10.1038/s41467-023-41201-0 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELLEENLYFQGASHHHHHHHH | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.294006 | 0 | 266 | 0 | 231 | 0 | 247 | 0 | 0 | scfv16 | N.A. | homo sapiens | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 34;21 | 21;7 | 0.91;0.7 | H_only | train |
8g0w_C | 8g0w | crystal structure of human norovirus gii.4 p domain in complex with nanobody m4 | no | viral protein | 2023-02-01 | 2023-10-04 | x-ray diffraction | 2.87 | 0.294 | 0.251 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | QVKLQQSGGGLVQPGGSLRLSCAASESTISINTLGWYRQAPGNQRELVATITTGGTTNYADSVKGRFTISRDNAKNTVYLQMNNLEPGDTAVYYCNLKRRDLQSRFGGYWGQGTQVTVSS | N.A. | QVKLQQSGGGLVQPGGSLRLSCAASESTISINTLGWYRQAPGNQRELVATITTGGTTNYADSVKGRFTISRDNAKNTVYLQMNNLEPGDTAVYYCNLKRRDLQSRFGGYWGQGTQVT | N.A. | 13.832592 | 0 | 120 | 0 | 117 | 0 | 117 | 0 | 0 | nanobody m4 | N.A. | lama glama | N.A. | A | protein | vp1 | norovirus | 33 | 13 | 0.93 | H_only | train |
8g0w_D | 8g0w | crystal structure of human norovirus gii.4 p domain in complex with nanobody m4 | no | viral protein | 2023-02-01 | 2023-10-04 | x-ray diffraction | 2.87 | 0.294 | 0.251 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | QVKLQQSGGGLVQPGGSLRLSCAASESTISINTLGWYRQAPGNQRELVATITTGGTTNYADSVKGRFTISRDNAKNTVYLQMNNLEPGDTAVYYCNLKRRDLQSRFGGYWGQGTQVTVSS | N.A. | QVKLQQSGGGLVQPGGSLRLSCAASESTISINTLGWYRQAPGNQRELVATITTGGTTNYADSVKGRFTISRDNAKNTVYLQMNNLEPGDTAVYYCNLKRRDLQSRFGGYWGQGT | N.A. | 13.815769 | 0 | 120 | 0 | 114 | 0 | 114 | 0 | 0 | nanobody m4 | N.A. | lama glama | N.A. | B | protein | vp1 | norovirus | 32 | 13 | 0.87 | H_only | train |
8g0w_G | 8g0w | crystal structure of human norovirus gii.4 p domain in complex with nanobody m4 | no | viral protein | 2023-02-01 | 2023-10-04 | x-ray diffraction | 2.87 | 0.294 | 0.251 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | G | N.A. | QVKLQQSGGGLVQPGGSLRLSCAASESTISINTLGWYRQAPGNQRELVATITTGGTTNYADSVKGRFTISRDNAKNTVYLQMNNLEPGDTAVYYCNLKRRDLQSRFGGYWGQGTQVTVSS | N.A. | QVKLQQSGGGLVQPGGSLRLSCAASESTISINTLGWYRQAPGNQRELVATITTGGTTNYADSVKGRFTISRDNAKNTVYLQMNNLEPGDTAVYYCNLKRRDLQSRFGGYWGQGTQVTV | N.A. | 13.87357 | 0 | 120 | 0 | 118 | 0 | 118 | 0 | 0 | nanobody m4 | N.A. | lama glama | N.A. | E | protein | vp1 | norovirus | 33 | 13 | 0.87 | H_only | train |
8g0w_H | 8g0w | crystal structure of human norovirus gii.4 p domain in complex with nanobody m4 | no | viral protein | 2023-02-01 | 2023-10-04 | x-ray diffraction | 2.87 | 0.294 | 0.251 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | H | N.A. | QVKLQQSGGGLVQPGGSLRLSCAASESTISINTLGWYRQAPGNQRELVATITTGGTTNYADSVKGRFTISRDNAKNTVYLQMNNLEPGDTAVYYCNLKRRDLQSRFGGYWGQGTQVTVSS | N.A. | QVKLQQSGGGLVQPGGSLRLSCAASESTISINTLGWYRQAPGNQRELVATITTGGTTNYADSVKGRFTISRDNAKNTVYLQMNNLEPGDTAVYYCNLKRRDLQSRFGGYWGQGTQ | N.A. | 13.848137 | 0 | 120 | 0 | 115 | 0 | 115 | 0 | 0 | nanobody m4 | N.A. | lama glama | N.A. | F | protein | vp1 | norovirus | 33 | 14 | 0.88 | H_only | train |
8ce4_F | 8ce4 | human alpha7 nicotinic receptor in complex with the e3 nanobody | no | membrane protein | 2023-02-01 | 2023-10-11 | electron microscopy | 2.7 | N.A. | N.A. | 37749098 | 10.1038/s41467-023-41734-4 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | AVQLQASGGGLVQAGDSLRLSCAASGGTFSHYAVGWFRQAPGKEREFVAAISWSGRSTSFANSVKGRFTISRDSAKNTAYLQMNNLKPEDTAVYCCAPARFGTGSAARDEYDDCGQGTQVTVSSAAAEQKLISEEDLNGAAHHHHHHGS | N.A. | AVQLQASGGGLVQAGDSLRLSCAASGGTFSHYAVGWFRQAPGKEREFVAAISWSGRSTSFANSVKGRFTISRDSAKNTAYLQMNNLKPEDTAVYCCAPARFGTGSAARDEYDDCGQGTQVTV | N.A. | 13.327745 | 0 | 149 | 0 | 122 | 0 | 122 | 0 | 0 | nanobody e3 | N.A. | vicugna pacos | N.A. | A;B | protein;protein | neuronal acetylcholine receptor subunit alpha-7;neuronal acetylcholine receptor subunit alpha-7 | homo sapiens;homo sapiens | 31;15 | 15;10 | 0.94;1.0 | H_only | train |
8ce4_J | 8ce4 | human alpha7 nicotinic receptor in complex with the e3 nanobody | no | membrane protein | 2023-02-01 | 2023-10-11 | electron microscopy | 2.7 | N.A. | N.A. | 37749098 | 10.1038/s41467-023-41734-4 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | J | N.A. | AVQLQASGGGLVQAGDSLRLSCAASGGTFSHYAVGWFRQAPGKEREFVAAISWSGRSTSFANSVKGRFTISRDSAKNTAYLQMNNLKPEDTAVYCCAPARFGTGSAARDEYDDCGQGTQVTVSSAAAEQKLISEEDLNGAAHHHHHHGS | N.A. | AVQLQASGGGLVQAGDSLRLSCAASGGTFSHYAVGWFRQAPGKEREFVAAISWSGRSTSFANSVKGRFTISRDSAKNTAYLQMNNLKPEDTAVYCCAPARFGTGSAARDEYDDCGQGTQVTV | N.A. | 13.321064 | 0 | 149 | 0 | 122 | 0 | 122 | 0 | 0 | nanobody e3 | N.A. | vicugna pacos | N.A. | A;E | protein;protein | neuronal acetylcholine receptor subunit alpha-7;neuronal acetylcholine receptor subunit alpha-7 | homo sapiens;homo sapiens | 15;31 | 10;15 | 1.0;0.94 | H_only | train |
8ce4_G | 8ce4 | human alpha7 nicotinic receptor in complex with the e3 nanobody | no | membrane protein | 2023-02-01 | 2023-10-11 | electron microscopy | 2.7 | N.A. | N.A. | 37749098 | 10.1038/s41467-023-41734-4 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | G | N.A. | AVQLQASGGGLVQAGDSLRLSCAASGGTFSHYAVGWFRQAPGKEREFVAAISWSGRSTSFANSVKGRFTISRDSAKNTAYLQMNNLKPEDTAVYCCAPARFGTGSAARDEYDDCGQGTQVTVSSAAAEQKLISEEDLNGAAHHHHHHGS | N.A. | AVQLQASGGGLVQAGDSLRLSCAASGGTFSHYAVGWFRQAPGKEREFVAAISWSGRSTSFANSVKGRFTISRDSAKNTAYLQMNNLKPEDTAVYCCAPARFGTGSAARDEYDDCGQGTQVTV | N.A. | 13.336225 | 0 | 149 | 0 | 122 | 0 | 122 | 0 | 0 | nanobody e3 | N.A. | vicugna pacos | N.A. | B;C | protein;protein | neuronal acetylcholine receptor subunit alpha-7;neuronal acetylcholine receptor subunit alpha-7 | homo sapiens;homo sapiens | 31;15 | 15;10 | 0.94;1.0 | H_only | train |
8ce4_H | 8ce4 | human alpha7 nicotinic receptor in complex with the e3 nanobody | no | membrane protein | 2023-02-01 | 2023-10-11 | electron microscopy | 2.7 | N.A. | N.A. | 37749098 | 10.1038/s41467-023-41734-4 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | H | N.A. | AVQLQASGGGLVQAGDSLRLSCAASGGTFSHYAVGWFRQAPGKEREFVAAISWSGRSTSFANSVKGRFTISRDSAKNTAYLQMNNLKPEDTAVYCCAPARFGTGSAARDEYDDCGQGTQVTVSSAAAEQKLISEEDLNGAAHHHHHHGS | N.A. | AVQLQASGGGLVQAGDSLRLSCAASGGTFSHYAVGWFRQAPGKEREFVAAISWSGRSTSFANSVKGRFTISRDSAKNTAYLQMNNLKPEDTAVYCCAPARFGTGSAARDEYDDCGQGTQVTV | N.A. | 13.331264 | 0 | 149 | 0 | 122 | 0 | 122 | 0 | 0 | nanobody e3 | N.A. | vicugna pacos | N.A. | C;D | protein;protein | neuronal acetylcholine receptor subunit alpha-7;neuronal acetylcholine receptor subunit alpha-7 | homo sapiens;homo sapiens | 32;14 | 15;9 | 0.94;1.0 | H_only | train |
8ce4_I | 8ce4 | human alpha7 nicotinic receptor in complex with the e3 nanobody | no | membrane protein | 2023-02-01 | 2023-10-11 | electron microscopy | 2.7 | N.A. | N.A. | 37749098 | 10.1038/s41467-023-41734-4 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | I | N.A. | AVQLQASGGGLVQAGDSLRLSCAASGGTFSHYAVGWFRQAPGKEREFVAAISWSGRSTSFANSVKGRFTISRDSAKNTAYLQMNNLKPEDTAVYCCAPARFGTGSAARDEYDDCGQGTQVTVSSAAAEQKLISEEDLNGAAHHHHHHGS | N.A. | AVQLQASGGGLVQAGDSLRLSCAASGGTFSHYAVGWFRQAPGKEREFVAAISWSGRSTSFANSVKGRFTISRDSAKNTAYLQMNNLKPEDTAVYCCAPARFGTGSAARDEYDDCGQGTQVTV | N.A. | 13.333527 | 0 | 149 | 0 | 122 | 0 | 122 | 0 | 0 | nanobody e3 | N.A. | vicugna pacos | N.A. | D;E | protein;protein | neuronal acetylcholine receptor subunit alpha-7;neuronal acetylcholine receptor subunit alpha-7 | homo sapiens;homo sapiens | 31;14 | 15;9 | 0.94;1.0 | H_only | train |
8g1c_A_B | 8g1c | crystal structure of polyreactive 3b03 human fab | no | immune system | 2023-02-01 | 2023-10-18 | x-ray diffraction | 1.63 | 0.236 | 0.202 | 37804505 | 10.1016/j.celrep.2023.113190 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | A | B | EVQLVESGGGLVQPGGSLRLSCSASGFTFSNYAMHWVRQAPGKGLEYVSAISGNGGNTYYADSVKGRFSISRDNSKNTLFLQMSSLKTEDTAVYYCVKGQFLEWYNWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQCDNWPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | EVQLVESGGGLVQPGGSLRLSCSASGFTFSNYAMHWVRQAPGKGLEYVSAISGNGGNTYYADSVKGRFSISRDNSKNTLFLQMSSLKTEDTAVYYCVKGQFLEWYNWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQCDNWPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 21.714773 | 22.421581 | 221 | 211 | 215 | 211 | 221 | 211 | 85 | heavy chain of monoreactive 3b03 human fab fragment | light chain of monoreactive 3b03 human fab fragment | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8g1c_C_D | 8g1c | crystal structure of polyreactive 3b03 human fab | no | immune system | 2023-02-01 | 2023-10-18 | x-ray diffraction | 1.63 | 0.236 | 0.202 | 37804505 | 10.1016/j.celrep.2023.113190 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | C | D | EVQLVESGGGLVQPGGSLRLSCSASGFTFSNYAMHWVRQAPGKGLEYVSAISGNGGNTYYADSVKGRFSISRDNSKNTLFLQMSSLKTEDTAVYYCVKGQFLEWYNWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQCDNWPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | EVQLVESGGGLVQPGGSLRLSCSASGFTFSNYAMHWVRQAPGKGLEYVSAISGNGGNTYYADSVKGRFSISRDNSKNTLFLQMSSLKTEDTAVYYCVKGQFLEWYNWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | EIVMTQSPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQCDNWPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFN | 20.8389 | 22.833672 | 221 | 211 | 213 | 210 | 221 | 210 | 83 | heavy chain of monoreactive 3b03 human fab fragment | light chain of monoreactive 3b03 human fab fragment | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8i7v_E | 8i7v | cryo-em structure of acipimox bound human hydroxy-carboxylic acid receptor 2 in complex with gi heterotrimer | no | membrane protein | 2023-02-02 | 2024-02-07 | electron microscopy | 2.77 | N.A. | N.A. | 37932263 | 10.1038/s41467-023-42764-8 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAALEVLFQ | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.32926 | 0 | 257 | 0 | 233 | 0 | 247 | 0 | 0 | scfv16 | N.A. | mus musculus | N.A. | B;C | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 33;27 | 20;11 | 0.87;0.79 | H_only | train |
8cge_A | 8cge | the crystal structure of a cobalt-bound scfv reveals a tetrameric polyhistidine motif (tetrhis) | no | metal binding protein | 2023-02-03 | 2023-08-09 | x-ray diffraction | 2.5 | 0.248 | 0.19 | 37507458 | 10.1038/s42004-023-00962-x | 0 | auth_asym_id | scFv | N.A. | N.A. | A | N.A. | MKLCILLAVVAFVGLSLGQVQLQQSDAELVKPGASVKISCKVSGYTFTDHTIHWMKQRPEQGLEWIGYNYPRDGSTKYNEKFKGKATLTADKSSSTAYMQLNSLTSEDSAVYFCAKGFITTVVPSAYWGQGTLVTVSAGGGGSGGGGSGGGGSGGGGSDVQITQSPSYLAASPGETITINCRASKSISKYLAWYQEKPGKTNKLLIYSGSTLQSGIPSRFSGSGSGTDFTLTISSLEPEDFAMYYCQQHNEYPWTFGGGTKLEIKLPETGHHHHHHWSHPQFEKGGGSGGGSGGGSWSHPQFEK | N.A. | QVQLQQSDAELVKPGASVKISCKVSGYTFTDHTIHWMKQRPEQGLEWIGYNYPRDGSTKYNEKFKGKATLTADKSSSTAYMQLNSLTSEDSAVYFCAKGFITTVVPSAYWGQGTLVTVSAGGGGSGGGGSGGGGSGGGGSDVQITQSPSYLAASPGETITINCRASKSISKYLAWYQEKPGKTNKLLIYSGSTLQSGIPSRFSGSGSGTDFTLTISSLEPEDFAMYYCQQHNEYPWTFGGGTKLEIKLPETGHHHHHHWSHPQ | N.A. | 19.37768 | 0 | 304 | 0 | 245 | 0 | 263 | 0 | 0 | single chain fv 2a2 | N.A. | synthetic construct | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
8cge_B | 8cge | the crystal structure of a cobalt-bound scfv reveals a tetrameric polyhistidine motif (tetrhis) | no | metal binding protein | 2023-02-03 | 2023-08-09 | x-ray diffraction | 2.5 | 0.248 | 0.19 | 37507458 | 10.1038/s42004-023-00962-x | 0 | auth_asym_id | scFv | N.A. | N.A. | B | N.A. | MKLCILLAVVAFVGLSLGQVQLQQSDAELVKPGASVKISCKVSGYTFTDHTIHWMKQRPEQGLEWIGYNYPRDGSTKYNEKFKGKATLTADKSSSTAYMQLNSLTSEDSAVYFCAKGFITTVVPSAYWGQGTLVTVSAGGGGSGGGGSGGGGSGGGGSDVQITQSPSYLAASPGETITINCRASKSISKYLAWYQEKPGKTNKLLIYSGSTLQSGIPSRFSGSGSGTDFTLTISSLEPEDFAMYYCQQHNEYPWTFGGGTKLEIKLPETGHHHHHHWSHPQFEKGGGSGGGSGGGSWSHPQFEK | N.A. | QVQLQQSDAELVKPGASVKISCKVSGYTFTDHTIHWMKQRPEQGLEWIGYNYPRDGSTKYNEKFKGKATLTADKSSSTAYMQLNSLTSEDSAVYFCAKGFITTVVPSAYWGQGTLVTVSAGGGGSGGGGSGGGGSGGGGSDVQITQSPSYLAASPGETITINCRASKSISKYLAWYQEKPGKTNKLLIYSGSTLQSGIPSRFSGSGSGTDFTLTISSLEPEDFAMYYCQQHNEYPWTFGGGTKLEIKLPETGHHHHHHWSHPQFEK | N.A. | 18.167637 | 0 | 304 | 0 | 246 | 0 | 266 | 0 | 0 | single chain fv 2a2 | N.A. | synthetic construct | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
8g2m_H_L | 8g2m | the tumor activated anti-ctla-4 monoclonal antibody xtx101 demonstrates tumor-growth inhibition and tumor-selective pharmacodynamics in mouse models of cancer | no | immune system | 2023-02-05 | 2024-02-14 | x-ray diffraction | 1.8 | 0.214 | 0.18 | 38164757 | 10.1136/jitc-2023-007785 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV6 | H | L | QVQLVQSGAEVKKPGSSVKVSCKASGYTFTNYFMNWVRQAPGQGLEWMGRVDPEQGRADYAEKFKKRVTITADKSTSTAYMELSSLRSEDTAVYYCARRAMDNYGFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSAGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKA | PDFQSVTPKEKVTITCSANGYMYWYQQKPDQSPKLWVHGTSNLASGVPSRFSGSGSGTDFTLTINSLEAEDAATYYCHHWSNTQWTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | QVQLVQSGAEVKKPGSSVKVSCKASGYTFTNYFMNWVRQAPGQGLEWMGRVDPEQGRADYAEKFKKRVTITADKSTSTAYMELSSLRSEDTAVYYCARRAMDNYGFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSAGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKA | PDFQSVTPKEKVTITCSANGYMYWYQQKPDQSPKLWVHGTSNLASGVPSRFSGSGSGTDFTLTINSLEAEDAATYYCHHWSNTQWTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 23.022778 | 22.833475 | 220 | 202 | 220 | 202 | 220 | 202 | 95 | heavy chain of humanized igg | light chain of humanized igg | mus musculus | mus musculus | F | peptide | masking peptide | peptide display vector fth1 | 25 | 13 | 0.81 | HL | train |
8i95_H | 8i95 | structure of ep54-c3ar-go complex | yes | signaling protein/immune system | 2023-02-06 | 2023-10-18 | electron microscopy | 2.88 | N.A. | N.A. | 37852260 | 10.1016/j.cell.2023.09.020 | 0 | auth_asym_id | scFv | N.A. | N.A. | H | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK | N.A. | 17.145636 | 0 | 248 | 0 | 231 | 0 | 248 | 0 | 0 | antibody fragment - scfv16 | N.A. | mus musculus | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(o) subunit alpha;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 27;23 | 17;9 | 0.94;0.82 | H_only | train |
8i97_H | 8i97 | structure of apo-c3ar-go complex (glacios) | yes | signaling protein/immune system | 2023-02-06 | 2023-10-18 | electron microscopy | 3.19 | N.A. | N.A. | 37852260 | 10.1016/j.cell.2023.09.020 | 0 | auth_asym_id | scFv | N.A. | N.A. | H | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.147186 | 0 | 248 | 0 | 233 | 0 | 247 | 0 | 0 | antibody fragment - scfv16 | N.A. | mus musculus | N.A. | B;A | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(o) subunit alpha | homo sapiens;homo sapiens | 23;29 | 9;17 | 0.75;0.85 | H_only | train |
8i9a_H | 8i9a | structure of ep54-c3ar-gq complex | no | signaling protein/immune system | 2023-02-06 | 2023-10-18 | electron microscopy | 3.57 | N.A. | N.A. | 37852260 | 10.1016/j.cell.2023.09.020 | 0 | auth_asym_id | scFv | N.A. | N.A. | H | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK | N.A. | 17.22873 | 0 | 248 | 0 | 231 | 0 | 248 | 0 | 0 | antibody fragment - scfv16 | N.A. | mus musculus | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(q) subunit alpha;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 31;23 | 20;8 | 0.87;0.73 | H_only | train |
8i9l_H | 8i9l | structure of c3a-c3ar-go complex (composite map) | yes | signaling protein/immune system | 2023-02-07 | 2023-10-18 | electron microscopy | 3.18 | N.A. | N.A. | 37852260 | 10.1016/j.cell.2023.09.020 | 0 | auth_asym_id | scFv | N.A. | N.A. | H | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK | N.A. | 17.155592 | 0 | 248 | 0 | 234 | 0 | 248 | 0 | 0 | antibody fragment - scfv16 | N.A. | mus musculus | N.A. | B;A | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(o) subunit alpha | homo sapiens;homo sapiens | 23;28 | 8;17 | 0.73;0.89 | H_only | train |
8i9s_H | 8i9s | structure of apo-c3ar-go complex (titan) | yes | signaling protein/immune system | 2023-02-07 | 2023-10-18 | electron microscopy | 3.26 | N.A. | N.A. | 37852260 | 10.1016/j.cell.2023.09.020 | 0 | auth_asym_id | scFv | N.A. | N.A. | H | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.517925 | 0 | 248 | 0 | 233 | 0 | 247 | 0 | 0 | antibody fragment - scfv16 | N.A. | mus musculus | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(o) subunit alpha;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 26;21 | 16;8 | 0.94;0.73 | H_only | train |
8che_H_L | 8che | tlt-1 binding fab of the bispecific antibody hmb-001 in complex with the tlt-1 stalk peptide | no | blood clotting | 2023-02-07 | 2023-12-27 | x-ray diffraction | 1.49 | 0.174 | 0.157 | 39196196 | 10.1038/s44161-023-00418-4 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV2 | H | L | EVQLVESGGGLVQPGGSLRLSCAASGFTFSRYWMTWVRQAPGKGLVWVGEINPDSSTINYAPSVKGRFTISRDNAKNTLYLQMNSLRAEDTAVYYCASGVFTSWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESK | DIVMTQTPLSSPVTLGQPASISCRSSQSLVHRQGNTYFHWLQQRPGQPPRLLIYKVSNRFSGVPDRFSGSGAGTDFTLKISRVEAEDVGVYYCSQSTHVPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSCNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFTFSRYWMTWVRQAPGKGLVWVGEINPDSSTINYAPSVKGRFTISRDNAKNTLYLQMNSLRAEDTAVYYCASGVFTSWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVES | DIVMTQTPLSSPVTLGQPASISCRSSQSLVHRQGNTYFHWLQQRPGQPPRLLIYKVSNRFSGVPDRFSGSGAGTDFTLKISRVEAEDVGVYYCSQSTHVPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSCNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 20.994358 | 23.607668 | 215 | 219 | 214 | 219 | 214 | 219 | 96 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | C | peptide | trem-like transcript 1 protein | homo sapiens | 42 | 21 | 0.75 | HL | train |
8che_A_B | 8che | tlt-1 binding fab of the bispecific antibody hmb-001 in complex with the tlt-1 stalk peptide | no | blood clotting | 2023-02-07 | 2023-12-27 | x-ray diffraction | 1.49 | 0.174 | 0.157 | 39196196 | 10.1038/s44161-023-00418-4 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV2 | A | B | EVQLVESGGGLVQPGGSLRLSCAASGFTFSRYWMTWVRQAPGKGLVWVGEINPDSSTINYAPSVKGRFTISRDNAKNTLYLQMNSLRAEDTAVYYCASGVFTSWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESK | DIVMTQTPLSSPVTLGQPASISCRSSQSLVHRQGNTYFHWLQQRPGQPPRLLIYKVSNRFSGVPDRFSGSGAGTDFTLKISRVEAEDVGVYYCSQSTHVPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSCNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFTFSRYWMTWVRQAPGKGLVWVGEINPDSSTINYAPSVKGRFTISRDNAKNTLYLQMNSLRAEDTAVYYCASGVFTSWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVES | DIVMTQTPLSSPVTLGQPASISCRSSQSLVHRQGNTYFHWLQQRPGQPPRLLIYKVSNRFSGVPDRFSGSGAGTDFTLKISRVEAEDVGVYYCSQSTHVPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSCNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 20.941713 | 23.580885 | 215 | 219 | 214 | 219 | 214 | 219 | 99 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | D | peptide | trem-like transcript 1 protein | homo sapiens | 40 | 20 | 0.77 | HL | train |
8ia6_A | 8ia6 | crystal structure of scfv antibody against phospholipase a2 of echis carinatus venom | no | immune system | 2023-02-07 | 2024-02-14 | x-ray diffraction | 2.75 | 0.264 | 0.232 | 38154407 | 10.1016/j.molimm.2023.12.006 | 0 | auth_asym_id | scFv | N.A. | N.A. | A | N.A. | AEVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSSISDNGQTTTYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKTPYLFDYWGQGTLVTVSSGGGGSGGGGSGGGGSTDIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYSASHLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHRRPPPTFGQGTKVEIKRAAALEHHHHHH | N.A. | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSSISDNGQTTTYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKTPYLFDYWGQGTLVTVSSGGGGSGGGGSGGGGSTDIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYSASHLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHRRPPPTFGQGTKVEI | N.A. | 17.250925 | 0 | 252 | 0 | 222 | 0 | 238 | 0 | 0 | scfv antibody | N.A. | homo sapiens | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
8ia6_B | 8ia6 | crystal structure of scfv antibody against phospholipase a2 of echis carinatus venom | no | immune system | 2023-02-07 | 2024-02-14 | x-ray diffraction | 2.75 | 0.264 | 0.232 | 38154407 | 10.1016/j.molimm.2023.12.006 | 0 | auth_asym_id | scFv | N.A. | N.A. | B | N.A. | AEVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSSISDNGQTTTYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKTPYLFDYWGQGTLVTVSSGGGGSGGGGSGGGGSTDIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYSASHLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHRRPPPTFGQGTKVEIKRAAALEHHHHHH | N.A. | EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSSISDNGQTTTYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKTPYLFDYWGQGTLVTVSSGGGGSGGGGSGGGGSTDIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYSASHLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHRRPPPTFGQGTKVEI | N.A. | 17.293606 | 0 | 252 | 0 | 222 | 0 | 238 | 0 | 0 | scfv antibody | N.A. | homo sapiens | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
8ia8_S | 8ia8 | cryo-em structure of c3ar-gi-scfv16 bound with e7 peptide | yes | immune system | 2023-02-08 | 2023-05-24 | electron microscopy | 2.86 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.627316 | 0 | 247 | 0 | 233 | 0 | 247 | 0 | 0 | scfv16 | N.A. | vicugna pacos | N.A. | C;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 33;23 | 20;9 | 0.95;0.75 | H_only | train |
8g3m_E_F | 8g3m | n2 neuraminidase of a/tanzania/205/2010 h3n2 in complex with 3 fni9 fab molecules | no | viral protein/immune system | 2023-02-08 | 2023-05-31 | electron microscopy | 3 | N.A. | N.A. | 37258672 | 10.1038/s41586-023-06136-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | E | F | QVHLVQSGAEVKEPGSSVTVSCKASGGSFNNQAISWVRQAPGQGLEWMGGIFPISGTPTSAQRFQGRVTFTADESTTTVYMDLSSLRSDDTAVYYCARAGSDYFNRDLGWENYYFASWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVMTQSPATLSLSSGERATLSCRASRSVSSNLAWYQQKPGQAPRLLIYDASTRATGFSARFAGSGSGTEFTLTISSLQSEDSAIYYCQQYNNWPPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVHLVQSGAEVKEPGSSVTVSCKASGGSFNNQAISWVRQAPGQGLEWMGGIFPISGTPTSAQRFQGRVTFTADESTTTVYMDLSSLRSDDTAVYYCARAGSDYFNRDLGWENYYFASWGQGTLVTVSSAS | EIVMTQSPATLSLSSGERATLSCRASRSVSSNLAWYQQKPGQAPRLLIYDASTRATGFSARFAGSGSGTEFTLTISSLQSEDSAIYYCQQYNNWPPWTFGQGTKVEIKRT | 14.739154 | 14.013342 | 231 | 215 | 130 | 110 | 130 | 110 | 40 | fni9 fab heavy chain | fni9 fab light chain | homo sapiens | homo sapiens | G | protein | neuraminidase | influenza a virus | 50 | 14 | 0.7 | HL | train |
8g3m_A_D | 8g3m | n2 neuraminidase of a/tanzania/205/2010 h3n2 in complex with 3 fni9 fab molecules | no | viral protein/immune system | 2023-02-08 | 2023-05-31 | electron microscopy | 3 | N.A. | N.A. | 37258672 | 10.1038/s41586-023-06136-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | A | D | QVHLVQSGAEVKEPGSSVTVSCKASGGSFNNQAISWVRQAPGQGLEWMGGIFPISGTPTSAQRFQGRVTFTADESTTTVYMDLSSLRSDDTAVYYCARAGSDYFNRDLGWENYYFASWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVMTQSPATLSLSSGERATLSCRASRSVSSNLAWYQQKPGQAPRLLIYDASTRATGFSARFAGSGSGTEFTLTISSLQSEDSAIYYCQQYNNWPPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVHLVQSGAEVKEPGSSVTVSCKASGGSFNNQAISWVRQAPGQGLEWMGGIFPISGTPTSAQRFQGRVTFTADESTTTVYMDLSSLRSDDTAVYYCARAGSDYFNRDLGWENYYFASWGQGTLVTVSSAS | EIVMTQSPATLSLSSGERATLSCRASRSVSSNLAWYQQKPGQAPRLLIYDASTRATGFSARFAGSGSGTEFTLTISSLQSEDSAIYYCQQYNNWPPWTFGQGTKVEIKRT | 14.744967 | 14.004895 | 231 | 215 | 130 | 110 | 130 | 110 | 40 | fni9 fab heavy chain | fni9 fab light chain | homo sapiens | homo sapiens | J | protein | neuraminidase | influenza a virus | 51 | 14 | 0.7 | HL | train |
8g3m_C_I | 8g3m | n2 neuraminidase of a/tanzania/205/2010 h3n2 in complex with 3 fni9 fab molecules | no | viral protein/immune system | 2023-02-08 | 2023-05-31 | electron microscopy | 3 | N.A. | N.A. | 37258672 | 10.1038/s41586-023-06136-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | C | I | QVHLVQSGAEVKEPGSSVTVSCKASGGSFNNQAISWVRQAPGQGLEWMGGIFPISGTPTSAQRFQGRVTFTADESTTTVYMDLSSLRSDDTAVYYCARAGSDYFNRDLGWENYYFASWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVMTQSPATLSLSSGERATLSCRASRSVSSNLAWYQQKPGQAPRLLIYDASTRATGFSARFAGSGSGTEFTLTISSLQSEDSAIYYCQQYNNWPPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVHLVQSGAEVKEPGSSVTVSCKASGGSFNNQAISWVRQAPGQGLEWMGGIFPISGTPTSAQRFQGRVTFTADESTTTVYMDLSSLRSDDTAVYYCARAGSDYFNRDLGWENYYFASWGQGTLVTVSSAS | EIVMTQSPATLSLSSGERATLSCRASRSVSSNLAWYQQKPGQAPRLLIYDASTRATGFSARFAGSGSGTEFTLTISSLQSEDSAIYYCQQYNNWPPWTFGQGTKVEIKRT | 14.737002 | 14.001665 | 231 | 215 | 130 | 110 | 130 | 110 | 39 | fni9 fab heavy chain | fni9 fab light chain | homo sapiens | homo sapiens | L | protein | neuraminidase | influenza a virus | 50 | 14 | 0.7 | HL | train |
8g3n_E_F | 8g3n | n2 neuraminidase of a/tanzania/205/2010 h3n2 in complex with 4 fni9 fab molecules | no | viral protein/immune system | 2023-02-08 | 2023-05-31 | electron microscopy | 2.9 | N.A. | N.A. | 37258672 | 10.1038/s41586-023-06136-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | E | F | QVHLVQSGAEVKEPGSSVTVSCKASGGSFNNQAISWVRQAPGQGLEWMGGIFPISGTPTSAQRFQGRVTFTADESTTTVYMDLSSLRSDDTAVYYCARAGSDYFNRDLGWENYYFASWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVMTQSPATLSLSSGERATLSCRASRSVSSNLAWYQQKPGQAPRLLIYDASTRATGFSARFAGSGSGTEFTLTISSLQSEDSAIYYCQQYNNWPPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVHLVQSGAEVKEPGSSVTVSCKASGGSFNNQAISWVRQAPGQGLEWMGGIFPISGTPTSAQRFQGRVTFTADESTTTVYMDLSSLRSDDTAVYYCARAGSDYFNRDLGWENYYFASWGQGTLVTVSSAS | EIVMTQSPATLSLSSGERATLSCRASRSVSSNLAWYQQKPGQAPRLLIYDASTRATGFSARFAGSGSGTEFTLTISSLQSEDSAIYYCQQYNNWPPWTFGQGTKVEIKRT | 14.737323 | 14.012033 | 231 | 215 | 130 | 110 | 130 | 110 | 40 | fni9 fab heavy chain | fni9 fab light chain | homo sapiens | homo sapiens | G | protein | neuraminidase | influenza a virus | 49 | 14 | 0.7 | HL | train |
8g3n_A_D | 8g3n | n2 neuraminidase of a/tanzania/205/2010 h3n2 in complex with 4 fni9 fab molecules | no | viral protein/immune system | 2023-02-08 | 2023-05-31 | electron microscopy | 2.9 | N.A. | N.A. | 37258672 | 10.1038/s41586-023-06136-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | A | D | QVHLVQSGAEVKEPGSSVTVSCKASGGSFNNQAISWVRQAPGQGLEWMGGIFPISGTPTSAQRFQGRVTFTADESTTTVYMDLSSLRSDDTAVYYCARAGSDYFNRDLGWENYYFASWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVMTQSPATLSLSSGERATLSCRASRSVSSNLAWYQQKPGQAPRLLIYDASTRATGFSARFAGSGSGTEFTLTISSLQSEDSAIYYCQQYNNWPPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVHLVQSGAEVKEPGSSVTVSCKASGGSFNNQAISWVRQAPGQGLEWMGGIFPISGTPTSAQRFQGRVTFTADESTTTVYMDLSSLRSDDTAVYYCARAGSDYFNRDLGWENYYFASWGQGTLVTVSSAS | EIVMTQSPATLSLSSGERATLSCRASRSVSSNLAWYQQKPGQAPRLLIYDASTRATGFSARFAGSGSGTEFTLTISSLQSEDSAIYYCQQYNNWPPWTFGQGTKVEIKRT | 14.732361 | 14.010821 | 231 | 215 | 130 | 110 | 130 | 110 | 40 | fni9 fab heavy chain | fni9 fab light chain | homo sapiens | homo sapiens | J | protein | neuraminidase | influenza a virus | 49 | 14 | 0.7 | HL | train |
8g3n_B_H | 8g3n | n2 neuraminidase of a/tanzania/205/2010 h3n2 in complex with 4 fni9 fab molecules | no | viral protein/immune system | 2023-02-08 | 2023-05-31 | electron microscopy | 2.9 | N.A. | N.A. | 37258672 | 10.1038/s41586-023-06136-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | B | H | QVHLVQSGAEVKEPGSSVTVSCKASGGSFNNQAISWVRQAPGQGLEWMGGIFPISGTPTSAQRFQGRVTFTADESTTTVYMDLSSLRSDDTAVYYCARAGSDYFNRDLGWENYYFASWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVMTQSPATLSLSSGERATLSCRASRSVSSNLAWYQQKPGQAPRLLIYDASTRATGFSARFAGSGSGTEFTLTISSLQSEDSAIYYCQQYNNWPPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVHLVQSGAEVKEPGSSVTVSCKASGGSFNNQAISWVRQAPGQGLEWMGGIFPISGTPTSAQRFQGRVTFTADESTTTVYMDLSSLRSDDTAVYYCARAGSDYFNRDLGWENYYFASWGQGTLVTVSSAS | EIVMTQSPATLSLSSGERATLSCRASRSVSSNLAWYQQKPGQAPRLLIYDASTRATGFSARFAGSGSGTEFTLTISSLQSEDSAIYYCQQYNNWPPWTFGQGTKVEIKRT | 14.73721 | 14.012017 | 231 | 215 | 130 | 110 | 130 | 110 | 40 | fni9 fab heavy chain | fni9 fab light chain | homo sapiens | homo sapiens | K | protein | neuraminidase | influenza a virus | 49 | 14 | 0.7 | HL | train |
8g3n_C_I | 8g3n | n2 neuraminidase of a/tanzania/205/2010 h3n2 in complex with 4 fni9 fab molecules | no | viral protein/immune system | 2023-02-08 | 2023-05-31 | electron microscopy | 2.9 | N.A. | N.A. | 37258672 | 10.1038/s41586-023-06136-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | C | I | QVHLVQSGAEVKEPGSSVTVSCKASGGSFNNQAISWVRQAPGQGLEWMGGIFPISGTPTSAQRFQGRVTFTADESTTTVYMDLSSLRSDDTAVYYCARAGSDYFNRDLGWENYYFASWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVMTQSPATLSLSSGERATLSCRASRSVSSNLAWYQQKPGQAPRLLIYDASTRATGFSARFAGSGSGTEFTLTISSLQSEDSAIYYCQQYNNWPPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVHLVQSGAEVKEPGSSVTVSCKASGGSFNNQAISWVRQAPGQGLEWMGGIFPISGTPTSAQRFQGRVTFTADESTTTVYMDLSSLRSDDTAVYYCARAGSDYFNRDLGWENYYFASWGQGTLVTVSSAS | EIVMTQSPATLSLSSGERATLSCRASRSVSSNLAWYQQKPGQAPRLLIYDASTRATGFSARFAGSGSGTEFTLTISSLQSEDSAIYYCQQYNNWPPWTFGQGTKVEIKRT | 14.737303 | 14.011985 | 231 | 215 | 130 | 110 | 130 | 110 | 40 | fni9 fab heavy chain | fni9 fab light chain | homo sapiens | homo sapiens | L | protein | neuraminidase | influenza a virus | 49 | 14 | 0.7 | HL | train |
8g3p_F_J | 8g3p | n2 neuraminidase of a/hong_kong/2671/2019 in complex with 4 fni9 fab molecules | no | viral protein/immune system | 2023-02-08 | 2023-05-31 | electron microscopy | 2.5 | N.A. | N.A. | 37258672 | 10.1038/s41586-023-06136-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | F | J | QVHLVQSGAEVKEPGSSVTVSCKASGGSFNNQAISWVRQAPGQGLEWMGGIFPISGTPTSAQRFQGRVTFTADESTTTVYMDLSSLRSDDTAVYYCARAGSDYFNRDLGWENYYFASWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVMTQSPATLSLSSGERATLSCRASRSVSSNLAWYQQKPGQAPRLLIYDASTRATGFSARFAGSGSGTEFTLTISSLQSEDSAIYYCQQYNNWPPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVHLVQSGAEVKEPGSSVTVSCKASGGSFNNQAISWVRQAPGQGLEWMGGIFPISGTPTSAQRFQGRVTFTADESTTTVYMDLSSLRSDDTAVYYCARAGSDYFNRDLGWENYYFASWGQGTLVTVSSAS | EIVMTQSPATLSLSSGERATLSCRASRSVSSNLAWYQQKPGQAPRLLIYDASTRATGFSARFAGSGSGTEFTLTISSLQSEDSAIYYCQQYNNWPPWTFGQGTKVEIKRT | 14.517942 | 13.800188 | 231 | 215 | 130 | 110 | 130 | 110 | 40 | fni9 fab heavy chain | fni9 fab light chain | homo sapiens | homo sapiens | A | protein | neuraminidase | influenza a virus | 53 | 17 | 0.81 | HL | train |
8g3p_C_I | 8g3p | n2 neuraminidase of a/hong_kong/2671/2019 in complex with 4 fni9 fab molecules | no | viral protein/immune system | 2023-02-08 | 2023-05-31 | electron microscopy | 2.5 | N.A. | N.A. | 37258672 | 10.1038/s41586-023-06136-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | C | I | QVHLVQSGAEVKEPGSSVTVSCKASGGSFNNQAISWVRQAPGQGLEWMGGIFPISGTPTSAQRFQGRVTFTADESTTTVYMDLSSLRSDDTAVYYCARAGSDYFNRDLGWENYYFASWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVMTQSPATLSLSSGERATLSCRASRSVSSNLAWYQQKPGQAPRLLIYDASTRATGFSARFAGSGSGTEFTLTISSLQSEDSAIYYCQQYNNWPPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVHLVQSGAEVKEPGSSVTVSCKASGGSFNNQAISWVRQAPGQGLEWMGGIFPISGTPTSAQRFQGRVTFTADESTTTVYMDLSSLRSDDTAVYYCARAGSDYFNRDLGWENYYFASWGQGTLVTVSSAS | EIVMTQSPATLSLSSGERATLSCRASRSVSSNLAWYQQKPGQAPRLLIYDASTRATGFSARFAGSGSGTEFTLTISSLQSEDSAIYYCQQYNNWPPWTFGQGTKVEIKRT | 14.517258 | 13.800266 | 231 | 215 | 130 | 110 | 130 | 110 | 40 | fni9 fab heavy chain | fni9 fab light chain | homo sapiens | homo sapiens | B | protein | neuraminidase | influenza a virus | 53 | 17 | 0.81 | HL | train |
8g3p_G_K | 8g3p | n2 neuraminidase of a/hong_kong/2671/2019 in complex with 4 fni9 fab molecules | no | viral protein/immune system | 2023-02-08 | 2023-05-31 | electron microscopy | 2.5 | N.A. | N.A. | 37258672 | 10.1038/s41586-023-06136-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | G | K | QVHLVQSGAEVKEPGSSVTVSCKASGGSFNNQAISWVRQAPGQGLEWMGGIFPISGTPTSAQRFQGRVTFTADESTTTVYMDLSSLRSDDTAVYYCARAGSDYFNRDLGWENYYFASWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVMTQSPATLSLSSGERATLSCRASRSVSSNLAWYQQKPGQAPRLLIYDASTRATGFSARFAGSGSGTEFTLTISSLQSEDSAIYYCQQYNNWPPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVHLVQSGAEVKEPGSSVTVSCKASGGSFNNQAISWVRQAPGQGLEWMGGIFPISGTPTSAQRFQGRVTFTADESTTTVYMDLSSLRSDDTAVYYCARAGSDYFNRDLGWENYYFASWGQGTLVTVSSAS | EIVMTQSPATLSLSSGERATLSCRASRSVSSNLAWYQQKPGQAPRLLIYDASTRATGFSARFAGSGSGTEFTLTISSLQSEDSAIYYCQQYNNWPPWTFGQGTKVEIKRT | 14.51779 | 13.800408 | 231 | 215 | 130 | 110 | 130 | 110 | 41 | fni9 fab heavy chain | fni9 fab light chain | homo sapiens | homo sapiens | D | protein | neuraminidase | influenza a virus | 52 | 16 | 0.8 | HL | train |
8g3p_H_L | 8g3p | n2 neuraminidase of a/hong_kong/2671/2019 in complex with 4 fni9 fab molecules | no | viral protein/immune system | 2023-02-08 | 2023-05-31 | electron microscopy | 2.5 | N.A. | N.A. | 37258672 | 10.1038/s41586-023-06136-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | H | L | QVHLVQSGAEVKEPGSSVTVSCKASGGSFNNQAISWVRQAPGQGLEWMGGIFPISGTPTSAQRFQGRVTFTADESTTTVYMDLSSLRSDDTAVYYCARAGSDYFNRDLGWENYYFASWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVMTQSPATLSLSSGERATLSCRASRSVSSNLAWYQQKPGQAPRLLIYDASTRATGFSARFAGSGSGTEFTLTISSLQSEDSAIYYCQQYNNWPPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVHLVQSGAEVKEPGSSVTVSCKASGGSFNNQAISWVRQAPGQGLEWMGGIFPISGTPTSAQRFQGRVTFTADESTTTVYMDLSSLRSDDTAVYYCARAGSDYFNRDLGWENYYFASWGQGTLVTVSSAS | EIVMTQSPATLSLSSGERATLSCRASRSVSSNLAWYQQKPGQAPRLLIYDASTRATGFSARFAGSGSGTEFTLTISSLQSEDSAIYYCQQYNNWPPWTFGQGTKVEIKRT | 14.520989 | 13.800825 | 231 | 215 | 130 | 110 | 130 | 110 | 41 | fni9 fab heavy chain | fni9 fab light chain | homo sapiens | homo sapiens | E | protein | neuraminidase | influenza a virus | 52 | 16 | 0.8 | HL | train |
8g3q_I_D | 8g3q | n2 neuraminidase of a/tanzania/205/2010 h3n2 in complex with 3 fni17 fab molecules | no | viral protein/immune system | 2023-02-08 | 2023-05-31 | electron microscopy | 2.3 | N.A. | N.A. | 37258672 | 10.1038/s41586-023-06136-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | I | D | QVQLVQSGAEVKRPGSSVKVSCKPSGGTFSNNVISWVRQAPGQGLEWMGGIIPTSGIANYAQKFQGRVAIIADKSTSTVYMALSSLRSEDSAVYFCARARSDYFNRDLGWEDYYFENWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | EIVMTQSPATLSVSPGERATLSCRASQSVGSSLVWYQQKPGQAPRLLIYGASTRATGVPARFSGSGSGTEFTLTISSLQSEDFAVYYCQHYNNWPPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVQSGAEVKRPGSSVKVSCKPSGGTFSNNVISWVRQAPGQGLEWMGGIIPTSGIANYAQKFQGRVAIIADKSTSTVYMALSSLRSEDSAVYFCARARSDYFNRDLGWEDYYFENWGQGTLVTVSSAS | IVMTQSPATLSVSPGERATLSCRASQSVGSSLVWYQQKPGQAPRLLIYGASTRATGVPARFSGSGSGTEFTLTISSLQSEDFAVYYCQHYNNWPPWTFGQGTKVEIKRT | 14.353367 | 13.474004 | 231 | 215 | 129 | 109 | 129 | 109 | 45 | fni17 fab heavy chain | fni17 fab light chain | homo sapiens | homo sapiens | E | protein | neuraminidase | influenza a virus | 58 | 15 | 0.71 | HL | train |
8g3q_A_L | 8g3q | n2 neuraminidase of a/tanzania/205/2010 h3n2 in complex with 3 fni17 fab molecules | no | viral protein/immune system | 2023-02-08 | 2023-05-31 | electron microscopy | 2.3 | N.A. | N.A. | 37258672 | 10.1038/s41586-023-06136-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | A | L | QVQLVQSGAEVKRPGSSVKVSCKPSGGTFSNNVISWVRQAPGQGLEWMGGIIPTSGIANYAQKFQGRVAIIADKSTSTVYMALSSLRSEDSAVYFCARARSDYFNRDLGWEDYYFENWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | EIVMTQSPATLSVSPGERATLSCRASQSVGSSLVWYQQKPGQAPRLLIYGASTRATGVPARFSGSGSGTEFTLTISSLQSEDFAVYYCQHYNNWPPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVQSGAEVKRPGSSVKVSCKPSGGTFSNNVISWVRQAPGQGLEWMGGIIPTSGIANYAQKFQGRVAIIADKSTSTVYMALSSLRSEDSAVYFCARARSDYFNRDLGWEDYYFENWGQGTLVTVSSAS | IVMTQSPATLSVSPGERATLSCRASQSVGSSLVWYQQKPGQAPRLLIYGASTRATGVPARFSGSGSGTEFTLTISSLQSEDFAVYYCQHYNNWPPWTFGQGTKVEIKRT | 14.341587 | 13.476479 | 231 | 215 | 129 | 109 | 129 | 109 | 45 | fni17 fab heavy chain | fni17 fab light chain | homo sapiens | homo sapiens | F | protein | neuraminidase | influenza a virus | 58 | 15 | 0.71 | HL | train |
8g3q_C_B | 8g3q | n2 neuraminidase of a/tanzania/205/2010 h3n2 in complex with 3 fni17 fab molecules | no | viral protein/immune system | 2023-02-08 | 2023-05-31 | electron microscopy | 2.3 | N.A. | N.A. | 37258672 | 10.1038/s41586-023-06136-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | C | B | QVQLVQSGAEVKRPGSSVKVSCKPSGGTFSNNVISWVRQAPGQGLEWMGGIIPTSGIANYAQKFQGRVAIIADKSTSTVYMALSSLRSEDSAVYFCARARSDYFNRDLGWEDYYFENWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | EIVMTQSPATLSVSPGERATLSCRASQSVGSSLVWYQQKPGQAPRLLIYGASTRATGVPARFSGSGSGTEFTLTISSLQSEDFAVYYCQHYNNWPPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVQSGAEVKRPGSSVKVSCKPSGGTFSNNVISWVRQAPGQGLEWMGGIIPTSGIANYAQKFQGRVAIIADKSTSTVYMALSSLRSEDSAVYFCARARSDYFNRDLGWEDYYFENWGQGTLVTVSSAS | IVMTQSPATLSVSPGERATLSCRASQSVGSSLVWYQQKPGQAPRLLIYGASTRATGVPARFSGSGSGTEFTLTISSLQSEDFAVYYCQHYNNWPPWTFGQGTKVEIKRT | 14.338466 | 13.470821 | 231 | 215 | 129 | 109 | 129 | 109 | 46 | fni17 fab heavy chain | fni17 fab light chain | homo sapiens | homo sapiens | G | protein | neuraminidase | influenza a virus | 56 | 15 | 0.71 | HL | train |
8g3v_A_L | 8g3v | n2 neuraminidase of a/hong_kong/2671/2019 in complex with 4 fni19 fab molecules | no | viral protein/immune system | 2023-02-08 | 2023-05-31 | electron microscopy | 2.2 | N.A. | N.A. | 37258672 | 10.1038/s41586-023-06136-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | A | L | QVQLVQSGAEVKRPGSSVRVSCKASEGTFNKYTLTWVRQAPGQGLEWMGGIIPISGIANYAQKFQGRVAITADESTTTAYMELSSLRSEDSAVYYCATAVSDYFNRDLGWEDYYFPFWGQGTLVTVASASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | EIVMTQSPATLSVSPGARATLFCRASRSVSDNLAWYQQKPGQAPRLLIFGASTRATGVPARFSGSGSGTQFTLTISSLQSEDFAVYYCQHYNIWPPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVQSGAEVKRPGSSVRVSCKASEGTFNKYTLTWVRQAPGQGLEWMGGIIPISGIANYAQKFQGRVAITADESTTTAYMELSSLRSEDSAVYYCATAVSDYFNRDLGWEDYYFPFWGQGTLVTVASA | EIVMTQSPATLSVSPGARATLFCRASRSVSDNLAWYQQKPGQAPRLLIFGASTRATGVPARFSGSGSGTQFTLTISSLQSEDFAVYYCQHYNIWPPWTFGQGTKVEIKR | 14.46207 | 13.500442 | 231 | 215 | 128 | 109 | 128 | 109 | 39 | fni19 fab heavy chain | fni19 fab light chain | homo sapiens | homo sapiens | G | protein | neuraminidase | influenza a virus | 53 | 13 | 0.68 | HL | train |
8g3v_B_M | 8g3v | n2 neuraminidase of a/hong_kong/2671/2019 in complex with 4 fni19 fab molecules | no | viral protein/immune system | 2023-02-08 | 2023-05-31 | electron microscopy | 2.2 | N.A. | N.A. | 37258672 | 10.1038/s41586-023-06136-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | B | M | QVQLVQSGAEVKRPGSSVRVSCKASEGTFNKYTLTWVRQAPGQGLEWMGGIIPISGIANYAQKFQGRVAITADESTTTAYMELSSLRSEDSAVYYCATAVSDYFNRDLGWEDYYFPFWGQGTLVTVASASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | EIVMTQSPATLSVSPGARATLFCRASRSVSDNLAWYQQKPGQAPRLLIFGASTRATGVPARFSGSGSGTQFTLTISSLQSEDFAVYYCQHYNIWPPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVQSGAEVKRPGSSVRVSCKASEGTFNKYTLTWVRQAPGQGLEWMGGIIPISGIANYAQKFQGRVAITADESTTTAYMELSSLRSEDSAVYYCATAVSDYFNRDLGWEDYYFPFWGQGTLVTVASA | EIVMTQSPATLSVSPGARATLFCRASRSVSDNLAWYQQKPGQAPRLLIFGASTRATGVPARFSGSGSGTQFTLTISSLQSEDFAVYYCQHYNIWPPWTFGQGTKVEIKR | 14.461926 | 13.500406 | 231 | 215 | 128 | 109 | 128 | 109 | 39 | fni19 fab heavy chain | fni19 fab light chain | homo sapiens | homo sapiens | H | protein | neuraminidase | influenza a virus | 53 | 13 | 0.68 | HL | train |
8g3v_C_N | 8g3v | n2 neuraminidase of a/hong_kong/2671/2019 in complex with 4 fni19 fab molecules | no | viral protein/immune system | 2023-02-08 | 2023-05-31 | electron microscopy | 2.2 | N.A. | N.A. | 37258672 | 10.1038/s41586-023-06136-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | C | N | QVQLVQSGAEVKRPGSSVRVSCKASEGTFNKYTLTWVRQAPGQGLEWMGGIIPISGIANYAQKFQGRVAITADESTTTAYMELSSLRSEDSAVYYCATAVSDYFNRDLGWEDYYFPFWGQGTLVTVASASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | EIVMTQSPATLSVSPGARATLFCRASRSVSDNLAWYQQKPGQAPRLLIFGASTRATGVPARFSGSGSGTQFTLTISSLQSEDFAVYYCQHYNIWPPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVQSGAEVKRPGSSVRVSCKASEGTFNKYTLTWVRQAPGQGLEWMGGIIPISGIANYAQKFQGRVAITADESTTTAYMELSSLRSEDSAVYYCATAVSDYFNRDLGWEDYYFPFWGQGTLVTVASA | EIVMTQSPATLSVSPGARATLFCRASRSVSDNLAWYQQKPGQAPRLLIFGASTRATGVPARFSGSGSGTQFTLTISSLQSEDFAVYYCQHYNIWPPWTFGQGTKVEIKR | 14.461774 | 13.500454 | 231 | 215 | 128 | 109 | 128 | 109 | 39 | fni19 fab heavy chain | fni19 fab light chain | homo sapiens | homo sapiens | I | protein | neuraminidase | influenza a virus | 52 | 12 | 0.67 | HL | train |
8g3v_D_O | 8g3v | n2 neuraminidase of a/hong_kong/2671/2019 in complex with 4 fni19 fab molecules | no | viral protein/immune system | 2023-02-08 | 2023-05-31 | electron microscopy | 2.2 | N.A. | N.A. | 37258672 | 10.1038/s41586-023-06136-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | D | O | QVQLVQSGAEVKRPGSSVRVSCKASEGTFNKYTLTWVRQAPGQGLEWMGGIIPISGIANYAQKFQGRVAITADESTTTAYMELSSLRSEDSAVYYCATAVSDYFNRDLGWEDYYFPFWGQGTLVTVASASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | EIVMTQSPATLSVSPGARATLFCRASRSVSDNLAWYQQKPGQAPRLLIFGASTRATGVPARFSGSGSGTQFTLTISSLQSEDFAVYYCQHYNIWPPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVQSGAEVKRPGSSVRVSCKASEGTFNKYTLTWVRQAPGQGLEWMGGIIPISGIANYAQKFQGRVAITADESTTTAYMELSSLRSEDSAVYYCATAVSDYFNRDLGWEDYYFPFWGQGTLVTVASA | EIVMTQSPATLSVSPGARATLFCRASRSVSDNLAWYQQKPGQAPRLLIFGASTRATGVPARFSGSGSGTQFTLTISSLQSEDFAVYYCQHYNIWPPWTFGQGTKVEIKR | 14.461715 | 13.501646 | 231 | 215 | 128 | 109 | 128 | 109 | 39 | fni19 fab heavy chain | fni19 fab light chain | homo sapiens | homo sapiens | J | protein | neuraminidase | influenza a virus | 53 | 13 | 0.68 | HL | train |
8g3z_G_I | 8g3z | neuraminidase of b/massachusetts/02/2012 (yamagata) in complex with 4 fni17 fab molecules | no | viral protein/immune system | 2023-02-08 | 2023-05-31 | electron microscopy | 2.3 | N.A. | N.A. | 37258672 | 10.1038/s41586-023-06136-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | G | I | QVQLVQSGAEVKRPGSSVKVSCKPSGGTFSNNVISWVRQAPGQGLEWMGGIIPTSGIANYAQKFQGRVAIIADKSTSTVYMALSSLRSEDSAVYFCARARSDYFNRDLGWEDYYFENWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | EIVMTQSPATLSVSPGERATLSCRASQSVGSSLVWYQQKPGQAPRLLIYGASTRATGVPARFSGSGSGTEFTLTISSLQSEDFAVYYCQHYNNWPPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVQSGAEVKRPGSSVKVSCKPSGGTFSNNVISWVRQAPGQGLEWMGGIIPTSGIANYAQKFQGRVAIIADKSTSTVYMALSSLRSEDSAVYFCARARSDYFNRDLGWEDYYFENWGQGTLVTVSSAS | IVMTQSPATLSVSPGERATLSCRASQSVGSSLVWYQQKPGQAPRLLIYGASTRATGVPARFSGSGSGTEFTLTISSLQSEDFAVYYCQHYNNWPPWTFGQGTKVEIKRT | 14.479443 | 13.598889 | 231 | 215 | 129 | 109 | 129 | 109 | 47 | fni17 fab heavy chain | fni17 fab light chain | homo sapiens | homo sapiens | A | protein | neuraminidase | influenza b virus | 57 | 16 | 0.73 | HL | train |
8g3z_J_K | 8g3z | neuraminidase of b/massachusetts/02/2012 (yamagata) in complex with 4 fni17 fab molecules | no | viral protein/immune system | 2023-02-08 | 2023-05-31 | electron microscopy | 2.3 | N.A. | N.A. | 37258672 | 10.1038/s41586-023-06136-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | J | K | QVQLVQSGAEVKRPGSSVKVSCKPSGGTFSNNVISWVRQAPGQGLEWMGGIIPTSGIANYAQKFQGRVAIIADKSTSTVYMALSSLRSEDSAVYFCARARSDYFNRDLGWEDYYFENWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | EIVMTQSPATLSVSPGERATLSCRASQSVGSSLVWYQQKPGQAPRLLIYGASTRATGVPARFSGSGSGTEFTLTISSLQSEDFAVYYCQHYNNWPPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVQSGAEVKRPGSSVKVSCKPSGGTFSNNVISWVRQAPGQGLEWMGGIIPTSGIANYAQKFQGRVAIIADKSTSTVYMALSSLRSEDSAVYFCARARSDYFNRDLGWEDYYFENWGQGTLVTVSSAS | IVMTQSPATLSVSPGERATLSCRASQSVGSSLVWYQQKPGQAPRLLIYGASTRATGVPARFSGSGSGTEFTLTISSLQSEDFAVYYCQHYNNWPPWTFGQGTKVEIKRT | 14.485939 | 13.608986 | 231 | 215 | 129 | 109 | 129 | 109 | 46 | fni17 fab heavy chain | fni17 fab light chain | homo sapiens | homo sapiens | B | protein | neuraminidase | influenza b virus | 58 | 16 | 0.73 | HL | train |
8g3z_H_L | 8g3z | neuraminidase of b/massachusetts/02/2012 (yamagata) in complex with 4 fni17 fab molecules | no | viral protein/immune system | 2023-02-08 | 2023-05-31 | electron microscopy | 2.3 | N.A. | N.A. | 37258672 | 10.1038/s41586-023-06136-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | H | L | QVQLVQSGAEVKRPGSSVKVSCKPSGGTFSNNVISWVRQAPGQGLEWMGGIIPTSGIANYAQKFQGRVAIIADKSTSTVYMALSSLRSEDSAVYFCARARSDYFNRDLGWEDYYFENWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | EIVMTQSPATLSVSPGERATLSCRASQSVGSSLVWYQQKPGQAPRLLIYGASTRATGVPARFSGSGSGTEFTLTISSLQSEDFAVYYCQHYNNWPPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVQSGAEVKRPGSSVKVSCKPSGGTFSNNVISWVRQAPGQGLEWMGGIIPTSGIANYAQKFQGRVAIIADKSTSTVYMALSSLRSEDSAVYFCARARSDYFNRDLGWEDYYFENWGQGTLVTVSSAS | IVMTQSPATLSVSPGERATLSCRASQSVGSSLVWYQQKPGQAPRLLIYGASTRATGVPARFSGSGSGTEFTLTISSLQSEDFAVYYCQHYNNWPPWTFGQGTKVEIKRT | 14.480382 | 13.607398 | 231 | 215 | 129 | 109 | 129 | 109 | 44 | fni17 fab heavy chain | fni17 fab light chain | homo sapiens | homo sapiens | C | protein | neuraminidase | influenza b virus | 58 | 16 | 0.76 | HL | train |
8g3z_E_F | 8g3z | neuraminidase of b/massachusetts/02/2012 (yamagata) in complex with 4 fni17 fab molecules | no | viral protein/immune system | 2023-02-08 | 2023-05-31 | electron microscopy | 2.3 | N.A. | N.A. | 37258672 | 10.1038/s41586-023-06136-y | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | E | F | QVQLVQSGAEVKRPGSSVKVSCKPSGGTFSNNVISWVRQAPGQGLEWMGGIIPTSGIANYAQKFQGRVAIIADKSTSTVYMALSSLRSEDSAVYFCARARSDYFNRDLGWEDYYFENWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | EIVMTQSPATLSVSPGERATLSCRASQSVGSSLVWYQQKPGQAPRLLIYGASTRATGVPARFSGSGSGTEFTLTISSLQSEDFAVYYCQHYNNWPPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVQSGAEVKRPGSSVKVSCKPSGGTFSNNVISWVRQAPGQGLEWMGGIIPTSGIANYAQKFQGRVAIIADKSTSTVYMALSSLRSEDSAVYFCARARSDYFNRDLGWEDYYFENWGQGTLVTVSSAS | IVMTQSPATLSVSPGERATLSCRASQSVGSSLVWYQQKPGQAPRLLIYGASTRATGVPARFSGSGSGTEFTLTISSLQSEDFAVYYCQHYNNWPPWTFGQGTKVEIKRT | 14.480828 | 13.609376 | 231 | 215 | 129 | 109 | 129 | 109 | 42 | fni17 fab heavy chain | fni17 fab light chain | homo sapiens | homo sapiens | D | protein | neuraminidase | influenza b virus | 56 | 16 | 0.76 | HL | train |
8ci1_F | 8ci1 | human alpha7 nicotinic receptor in complex with the e3 nanobody and nicotine | no | membrane protein | 2023-02-08 | 2023-10-11 | electron microscopy | 2.8 | N.A. | N.A. | 37749098 | 10.1038/s41467-023-41734-4 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | AVQLQASGGGLVQAGDSLRLSCAASGGTFSHYAVGWFRQAPGKEREFVAAISWSGRSTSFANSVKGRFTISRDSAKNTAYLQMNNLKPEDTAVYCCAPARFGTGSAARDEYDDCGQGTQVTVSSAAAEQKLISEEDLNGAAHHHHHHGS | N.A. | AVQLQASGGGLVQAGDSLRLSCAASGGTFSHYAVGWFRQAPGKEREFVAAISWSGRSTSFANSVKGRFTISRDSAKNTAYLQMNNLKPEDTAVYCCAPARFGTGSAARDEYDDCGQGTQVTVSS | N.A. | 13.784741 | 0 | 149 | 0 | 124 | 0 | 124 | 0 | 0 | nanobody e3 | N.A. | homo sapiens | N.A. | A;B | protein;protein | neuronal acetylcholine receptor subunit alpha-7;neuronal acetylcholine receptor subunit alpha-7 | homo sapiens;homo sapiens | 26;12 | 13;7 | 1.0;1.0 | H_only | train |
8ci1_J | 8ci1 | human alpha7 nicotinic receptor in complex with the e3 nanobody and nicotine | no | membrane protein | 2023-02-08 | 2023-10-11 | electron microscopy | 2.8 | N.A. | N.A. | 37749098 | 10.1038/s41467-023-41734-4 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | J | N.A. | AVQLQASGGGLVQAGDSLRLSCAASGGTFSHYAVGWFRQAPGKEREFVAAISWSGRSTSFANSVKGRFTISRDSAKNTAYLQMNNLKPEDTAVYCCAPARFGTGSAARDEYDDCGQGTQVTVSSAAAEQKLISEEDLNGAAHHHHHHGS | N.A. | AVQLQASGGGLVQAGDSLRLSCAASGGTFSHYAVGWFRQAPGKEREFVAAISWSGRSTSFANSVKGRFTISRDSAKNTAYLQMNNLKPEDTAVYCCAPARFGTGSAARDEYDDCGQGTQVTVSS | N.A. | 13.784777 | 0 | 149 | 0 | 124 | 0 | 124 | 0 | 0 | nanobody e3 | N.A. | homo sapiens | N.A. | A;E | protein;protein | neuronal acetylcholine receptor subunit alpha-7;neuronal acetylcholine receptor subunit alpha-7 | homo sapiens;homo sapiens | 12;26 | 7;13 | 1.0;1.0 | H_only | train |
8ci1_G | 8ci1 | human alpha7 nicotinic receptor in complex with the e3 nanobody and nicotine | no | membrane protein | 2023-02-08 | 2023-10-11 | electron microscopy | 2.8 | N.A. | N.A. | 37749098 | 10.1038/s41467-023-41734-4 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | G | N.A. | AVQLQASGGGLVQAGDSLRLSCAASGGTFSHYAVGWFRQAPGKEREFVAAISWSGRSTSFANSVKGRFTISRDSAKNTAYLQMNNLKPEDTAVYCCAPARFGTGSAARDEYDDCGQGTQVTVSSAAAEQKLISEEDLNGAAHHHHHHGS | N.A. | AVQLQASGGGLVQAGDSLRLSCAASGGTFSHYAVGWFRQAPGKEREFVAAISWSGRSTSFANSVKGRFTISRDSAKNTAYLQMNNLKPEDTAVYCCAPARFGTGSAARDEYDDCGQGTQVTVSS | N.A. | 13.784742 | 0 | 149 | 0 | 124 | 0 | 124 | 0 | 0 | nanobody e3 | N.A. | homo sapiens | N.A. | B;C | protein;protein | neuronal acetylcholine receptor subunit alpha-7;neuronal acetylcholine receptor subunit alpha-7 | homo sapiens;homo sapiens | 26;12 | 13;7 | 1.0;1.0 | H_only | train |
8ci1_H | 8ci1 | human alpha7 nicotinic receptor in complex with the e3 nanobody and nicotine | no | membrane protein | 2023-02-08 | 2023-10-11 | electron microscopy | 2.8 | N.A. | N.A. | 37749098 | 10.1038/s41467-023-41734-4 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | H | N.A. | AVQLQASGGGLVQAGDSLRLSCAASGGTFSHYAVGWFRQAPGKEREFVAAISWSGRSTSFANSVKGRFTISRDSAKNTAYLQMNNLKPEDTAVYCCAPARFGTGSAARDEYDDCGQGTQVTVSSAAAEQKLISEEDLNGAAHHHHHHGS | N.A. | AVQLQASGGGLVQAGDSLRLSCAASGGTFSHYAVGWFRQAPGKEREFVAAISWSGRSTSFANSVKGRFTISRDSAKNTAYLQMNNLKPEDTAVYCCAPARFGTGSAARDEYDDCGQGTQVTVSS | N.A. | 13.784765 | 0 | 149 | 0 | 124 | 0 | 124 | 0 | 0 | nanobody e3 | N.A. | homo sapiens | N.A. | C;D | protein;protein | neuronal acetylcholine receptor subunit alpha-7;neuronal acetylcholine receptor subunit alpha-7 | homo sapiens;homo sapiens | 26;12 | 13;7 | 1.0;1.0 | H_only | train |
8ci1_I | 8ci1 | human alpha7 nicotinic receptor in complex with the e3 nanobody and nicotine | no | membrane protein | 2023-02-08 | 2023-10-11 | electron microscopy | 2.8 | N.A. | N.A. | 37749098 | 10.1038/s41467-023-41734-4 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | I | N.A. | AVQLQASGGGLVQAGDSLRLSCAASGGTFSHYAVGWFRQAPGKEREFVAAISWSGRSTSFANSVKGRFTISRDSAKNTAYLQMNNLKPEDTAVYCCAPARFGTGSAARDEYDDCGQGTQVTVSSAAAEQKLISEEDLNGAAHHHHHHGS | N.A. | AVQLQASGGGLVQAGDSLRLSCAASGGTFSHYAVGWFRQAPGKEREFVAAISWSGRSTSFANSVKGRFTISRDSAKNTAYLQMNNLKPEDTAVYCCAPARFGTGSAARDEYDDCGQGTQVTVSS | N.A. | 13.78476 | 0 | 149 | 0 | 124 | 0 | 124 | 0 | 0 | nanobody e3 | N.A. | homo sapiens | N.A. | D;E | protein;protein | neuronal acetylcholine receptor subunit alpha-7;neuronal acetylcholine receptor subunit alpha-7 | homo sapiens;homo sapiens | 26;12 | 13;7 | 1.0;1.0 | H_only | train |
8ci2_F | 8ci2 | human alpha7 nicotinic receptor in complex with the c4 nanobody under sub-saturating conditions | no | membrane protein | 2023-02-08 | 2023-10-11 | electron microscopy | 4.4 | N.A. | N.A. | 37749098 | 10.1038/s41467-023-41734-4 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | AQVQLVESGGGLVQAGGSLKLSCAASGFTFAHYAMVWFRQAPGKEREFVAGISWSGASTYYASSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYVAAARFGVGVDDDYSYWGQGTQVTVSSAAEQKLISEEDLNGAAHHHHHHGS | N.A. | AQVQLVESGGGLVQAGGSLKLSCAASGFTFAHYAMVWFRQAPGKEREFVAGISWSGASTYYASSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYVAAARFGVGVDDDYSYWGQGTQVTV | N.A. | 13.937505 | 0 | 147 | 0 | 121 | 0 | 121 | 0 | 0 | nanobody c4 | N.A. | vicugna pacos | N.A. | A;B | protein;protein | neuronal acetylcholine receptor subunit alpha-7;neuronal acetylcholine receptor subunit alpha-7 | homo sapiens;homo sapiens | 25;16 | 12;11 | 0.92;1.0 | H_only | train |
8ci2_G | 8ci2 | human alpha7 nicotinic receptor in complex with the c4 nanobody under sub-saturating conditions | no | membrane protein | 2023-02-08 | 2023-10-11 | electron microscopy | 4.4 | N.A. | N.A. | 37749098 | 10.1038/s41467-023-41734-4 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | G | N.A. | AQVQLVESGGGLVQAGGSLKLSCAASGFTFAHYAMVWFRQAPGKEREFVAGISWSGASTYYASSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYVAAARFGVGVDDDYSYWGQGTQVTVSSAAEQKLISEEDLNGAAHHHHHHGS | N.A. | AQVQLVESGGGLVQAGGSLKLSCAASGFTFAHYAMVWFRQAPGKEREFVAGISWSGASTYYASSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYVAAARFGVGVDDDYSYWGQGTQVTV | N.A. | 13.925158 | 0 | 147 | 0 | 121 | 0 | 121 | 0 | 0 | nanobody c4 | N.A. | vicugna pacos | N.A. | B;C | protein;protein | neuronal acetylcholine receptor subunit alpha-7;neuronal acetylcholine receptor subunit alpha-7 | homo sapiens;homo sapiens | 23;13 | 11;9 | 1.0;1.0 | H_only | train |
8ci2_I | 8ci2 | human alpha7 nicotinic receptor in complex with the c4 nanobody under sub-saturating conditions | no | membrane protein | 2023-02-08 | 2023-10-11 | electron microscopy | 4.4 | N.A. | N.A. | 37749098 | 10.1038/s41467-023-41734-4 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | I | N.A. | AQVQLVESGGGLVQAGGSLKLSCAASGFTFAHYAMVWFRQAPGKEREFVAGISWSGASTYYASSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYVAAARFGVGVDDDYSYWGQGTQVTVSSAAEQKLISEEDLNGAAHHHHHHGS | N.A. | AQVQLVESGGGLVQAGGSLKLSCAASGFTFAHYAMVWFRQAPGKEREFVAGISWSGASTYYASSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYVAAARFGVGVDDDYSYWGQGTQVTV | N.A. | 13.861791 | 0 | 147 | 0 | 121 | 0 | 121 | 0 | 0 | nanobody c4 | N.A. | vicugna pacos | N.A. | D;E | protein;protein | neuronal acetylcholine receptor subunit alpha-7;neuronal acetylcholine receptor subunit alpha-7 | homo sapiens;homo sapiens | 27;14 | 14;9 | 0.93;1.0 | H_only | train |
8ia7_E | 8ia7 | structural insights into human brain gut peptide cholecystokinin receptors | no | neuropeptide | 2023-02-08 | 2023-12-06 | electron microscopy | 3.1 | N.A. | N.A. | 35672283 | 10.1038/s41421-022-00420-3 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKGSLEVLFQGPAAAHHHHHHHH | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.53915 | 0 | 269 | 0 | 231 | 0 | 246 | 0 | 0 | scfv16 | N.A. | mus musculus | N.A. | B;A | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(q) subunit alpha | homo sapiens;homo sapiens | 19;28 | 8;18 | 0.89;1.0 | H_only | train |
8chs_D | 8chs | human heparan sulfate n-deacetylase-n-sulfotransferase 1 in complex with calcium, 3'-phosphoadenosine-5'-phosphosulfate and nanobody nab13 (composite map and model). | no | carbohydrate | 2023-02-08 | 2024-02-21 | electron microscopy | 3.15 | N.A. | N.A. | 38351061 | 10.1038/s41467-024-45419-4 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | QVQLVESGGGSVQAGGSLRLSCAASGFNVDDYAIGWFRQSPGKEREGVSCIGGDGTTYYENSVKGRFTVSSDKRDNTVYLQMNNLRPEDTAIYFCAADRSKYCVGKYFSTPSQYDFWGRGTHVTVSSEPKTPKPQPAAGPGGQHHHHHHGAEQKLISEEDLS | N.A. | QVQLVESGGGSVQAGGSLRLSCAASGFNVDDYAIGWFRQSPGKEREGVSCIGGDGTTYYENSVKGRFTVSSDKRDNTVYLQMNNLRPEDTAIYFCAADRSKYCVGKYFSTPSQYDFWGRGTHVTV | N.A. | 13.056995 | 0 | 162 | 0 | 102 | 0 | 125 | 0 | 0 | nanobody nab13 - all ca rigid fit model derived from nanobody nab7 | N.A. | lama glama | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
8cif_H_L | 8cif | bovine naive ultralong antibody abd08 collected at 293k | no | immune system | 2023-02-09 | 2023-05-24 | x-ray diffraction | 2.2 | 0.228 | 0.177 | 37199504 | 10.1107/S2052252523003810 | 0 | auth_asym_id | VH+:FabL | IGHV4 | IGLV2 | H | L | MGILPSPGMPALLSLVSLLSVLLMGCVAQVQLRESGPSLVKPSQTLSLTCTASGSSLSDEAVGWVRQAPGKSLEWLGSIDTGGNTGYNPNLKTRLSITKDNSKSQVSLSMSSVTPEDSATYFCATVHQETHQTCPDGYNSGDDCGRGNWDCGTLDCWRCDWGGFCRASTDYRSVTATYTYEWYIDTWGQGLLVTVSSASTTAPKVYPLSSCCGDKSSSTVTLGCLVSSYMPEPVTVTWNSGALKSGVHTFPAVLQSSGLYSLSSMVTVPGSTSGTQTFTCNVAHPASSTKVDKAVDPRCGKHHHHHH | MGILPSPGMPALLSLVSLLSVLLMGCVAQGVLTQPSSVSGSLGQRVSITCSGSSSNVGRGYVSWYQMTPGSAPRTLIYGDTNRASGVPDRFSASRSGNTATLTISSLQAEDEADYFCASAEGSSSNAVFGSGTTLTVLGQPKSPPSVTLFPPSTEELNGNKATLVCLISDFYPGSVTVVWKADGSTITRNVETTRASKQSNSKYAASSYLSLTSSDWKSKGSYSCEVTHEGSTVTKTVKPSECS | AQVQLRESGPSLVKPSQTLSLTCTASGSSLSDEAVGWVRQAPGKSLEWLGSIDTGGNTGYNPNLKTRLSITKDNSKSQVSLSMSSVTPEDSATYFCATVHQETHQTCPDGYNSGDDCGRGNWDCGTLDCWRCDWGGFCRASTDYRSVTATYTYEWYIDTWGQGLLVTVSSASTTAPKVYPLSSCCGDKSSSTVTLGCLVSSYMPEPVTVTWNSGALKSGVHTFPAVLQSSGLYSLSSMVTVPGSTSGTQTFTCNVAHPASSTKVDKAVDPRC | GVLTQPSSVSGSLGQRVSITCSGSSSNVGRGYVSWYQMTPGSAPRTLIYGDTNRASGVPDRFSASRSGNTATLTISSLQAEDEADYFCASAEGSSSNAVFGSGTTLTVLGQPKSPPSVTLFPPSTEELNGNKATLVCLISDFYPGSVTVVWKADGSTITRNVETTRASKQSNSKYAASSYLSLTSSDWKSKGSYSCEVTHEGSTVTKTVKPSECS | 26.694345 | 23.8508 | 307 | 244 | 255 | 215 | 272 | 215 | 106 | heavy chain | light chain | bos taurus | bos taurus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8ib1_B_A | 8ib1 | structure of the lah31 fab bound to an influenza virus ha epitope peptide | no | antiviral protein | 2023-02-09 | 2023-07-26 | x-ray diffraction | 1.95 | 0.225 | 0.185 | 37556494 | 10.1371/journal.ppat.1011554 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV2 | B | A | MDAMKRGLCCVLLLCGAVFVSPSASQVQLEQSGAEVKKPGSSVKVSCKASGPMFSRSAFSWVRQAPGQGLEWMGRIIPTVDLKNYAQKFQGRVTFTADKSTATSYMELRSLKSEDTAVYYCARMGSGSSYYGMDVWGLGTTVTVSSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKGSSLEVLFQGPLGHHHHHH | MDAMKRGLCCVLLLCGAVFVSPSASDIVMTQSPLSLPVIPGEPASISCRSSQSLLQSNGNNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLTISRVEAEDVGVYYCLQARQSSVLTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLEQSGAEVKKPGSSVKVSCKASGPMFSRSAFSWVRQAPGQGLEWMGRIIPTVDLKNYAQKFQGRVTFTADKSTATSYMELRSLKSEDTAVYYCARMGSGSSYYGMDVWGLGTTVTVSSGASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | DIVMTQSPLSLPVIPGEPASISCRSSQSLLQSNGNNYLDWYLQKPGQSPQLLIYLGSNRASGVPDRFSGSGSGTDFTLTISRVEAEDVGVYYCLQARQSSVLTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 20.534191 | 23.42635 | 271 | 245 | 216 | 218 | 221 | 218 | 96 | lah31 fab heavy chain | lah31 fab light chain | homo sapiens | homo sapiens | C | peptide | hemagglutinin ha2 chain | influenza a virus | 33 | 20 | 0.83 | HL | train |
8cii_A_B | 8cii | delta-rbd complex with ba.2-07 fab, sars1-34 fab and c1 nanobody | no | virus | 2023-02-09 | 2024-02-21 | electron microscopy | 2.7 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | A | B | EVQLVQSGAEVKEPGSSVKVSCKASGGSFSTSGISWVRQAPGQGLEWMGVIIPIQGTGNYAQKFQGRVTITADESTTTVYMELSSLRSDDTALYYCARDQHIYDSSGHGGLWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | AIRMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKVLIYGASSLHSGVPSRFSGSGSGTDFTLTISRLQPEDFATYYCQQSHSSPRSFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVQSGAEVKEPGSSVKVSCKASGGSFSTSGISWVRQAPGQGLEWMGVIIPIQGTGNYAQKFQGRVTITADESTTTVYMELSSLRSDDTALYYCARDQHIYDSSGHGGLWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | AIRMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKVLIYGASSLHSGVPSRFSGSGSGTDFTLTISRLQPEDFATYYCQQSHSSPRSFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 22.92916 | 22.872551 | 231 | 214 | 221 | 211 | 227 | 211 | 98 | ba.2-07 fab heavy chain | ba.2-07 fab light chain | homo sapiens | homo sapiens | E | protein | spike protein s2' | homo sapiens | 44 | 20 | 0.8 | HL | train |
8cii_C | 8cii | delta-rbd complex with ba.2-07 fab, sars1-34 fab and c1 nanobody | no | virus | 2023-02-09 | 2024-02-21 | electron microscopy | 2.7 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | QVQLVESGGGLVQPGGSLRLSCAASGFTNDFYSIAWFRQAPGKEREGVSWLSVSDNTPTYVDSVKDRFTISRHNANNTVYLQMNMLKPEDTAIYYCAAGRFAGRDTWPSSYDYWGQGTQVTVSSKHHHHHH | N.A. | VQLVESGGGLVQPGGSLRLSCAASGFTNDFYSIAWFRQAPGKEREGVSWLSVSDNTPTYVDSVKDRFTISRHNANNTVYLQMNMLKPEDTAIYYCAAGRFAGRDTWPSSYDYWGQGTQVTVSS | N.A. | 13.638133 | 0 | 131 | 0 | 123 | 0 | 123 | 0 | 0 | c1 nanobody | N.A. | lama glama | N.A. | E | protein | spike protein s2' | homo sapiens | 40 | 15 | 0.94 | H_only | train |
8cii_H_L | 8cii | delta-rbd complex with ba.2-07 fab, sars1-34 fab and c1 nanobody | no | virus | 2023-02-09 | 2024-02-21 | electron microscopy | 2.7 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | H | L | QVQLVESGPGLVKPSETLSLTCTVSGDSVTSYHWSWIRQPPGKGLEWIGYIYYSGFTTYNPSLKSRVTMSLDTSKNQFSLRLSSVTAADTAVYYCVRLLSGSLYWNHWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | AIQLTQSPSTLSASVGDRVTITCRASQSIDNWLAWYQQKPGKAPKLLIYDGSSLQSGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSLFLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVESGPGLVKPSETLSLTCTVSGDSVTSYHWSWIRQPPGKGLEWIGYIYYSGFTTYNPSLKSRVTMSLDTSKNQFSLRLSSVTAADTAVYYCVRLLSGSLYWNHWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | AIQLTQSPSTLSASVGDRVTITCRASQSIDNWLAWYQQKPGKAPKLLIYDGSSLQSGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYNSLFLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 22.914558 | 22.654253 | 227 | 214 | 217 | 211 | 223 | 211 | 98 | sars1-34 fab heavy chain | sars1-34 fab light chain | homo sapiens | homo sapiens | E | protein | spike protein s2' | homo sapiens | 30 | 13 | 0.87 | HL | train |
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