PDB_ID_chain stringlengths 6 10 | PDB_ID stringlengths 4 4 | Title stringlengths 4 230 | Mutation(s) stringclasses 2
values | Classification stringclasses 305
values | Deposit_date stringdate 1976-03-17 00:00:00 2026-01-20 00:00:00 | Release_date stringdate 1976-05-19 00:00:00 2026-02-25 00:00:00 | Method stringclasses 5
values | Resolution stringclasses 459
values | R_free stringclasses 227
values | R_work stringclasses 211
values | PMID stringlengths 4 8 | DOI stringlengths 4 68 | Model_index int64 0 76 | Asym_ID_type stringclasses 2
values | Ab_type stringclasses 30
values | H_subgroup stringclasses 8
values | L_subgroup stringclasses 19
values | H_chain_ID stringclasses 60
values | L_chain_ID stringclasses 58
values | H_fas_seq stringlengths 4 919 | L_fas_seq stringlengths 4 627 | H_filled_pdb_seq stringlengths 4 896 | L_filled_pdb_seq stringlengths 4 523 | H_mean_radius float64 0 79.7 | L_mean_radius float64 0 84.3 | H_fas_seq_len int64 0 919 | L_fas_seq_len int64 0 627 | H_pdb_seq_len int64 0 879 | L_pdb_seq_len int64 0 523 | H_filled_seq_len int64 0 896 | L_filled_seq_len int64 0 523 | HL_inf_res_num int64 0 175 | H_mol_name stringlengths 2 331 | L_mol_name stringlengths 2 151 | H_species stringclasses 68
values | L_species stringclasses 42
values | Ag_chain_ID(s) stringclasses 279
values | Ag_type(s) stringclasses 16
values | Ag_mol_name(s) stringlengths 2 390 | Ag_species stringclasses 743
values | Ab_ag_inf_res_num stringlengths 1 11 | CDR_inf_res_num stringclasses 444
values | CDR_inf_res_ratio stringlengths 1 19 | hl_label stringclasses 3
values | split stringclasses 1
value |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
8gau_H_L | 8gau | structure of human nds.1 fab and 1g01 fab in complex with influenza virus neuraminidase from a/indiana/10/2011 (h3n2v) | no | viral protein/immune system | 2023-02-23 | 2024-02-28 | electron microscopy | 3.6 | N.A. | N.A. | 38430907 | 10.1016/j.immuni.2024.02.003 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | H | L | QVQLRQWGAGLLKPSETLSLTCDVYGGSFNFYFWTWIRQPPGKGLEWLGEITHSGSATYIPSLKSRVTLSVDTSKGQFSLKLTSVNVADTAVYYCAGLPIDYDTVHLGYYPMDVWGQGTPVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK | DIQMTQSPSSLSASVGDRVTITCRASQGIRNYLAWYQQKPGKVPKLLIYGASTLQSGVPSRFSGSGSGTDFSLTISSLQPEDIATYFCQEYNNAPRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLRQWGAGLLKPSETLSLTCDVYGGSFNFYFWTWIRQPPGKGLEWLGEITHSGSATYIPSLKSRVTLSVDTSKGQFSLKLTSVNVADTAVYYCAGLPIDYDTVHLGYYPMDVWGQGTPVTVSS | QMTQSPSSLSASVGDRVTITCRASQGIRNYLAWYQQKPGKVPKLLIYGASTLQSGVPSRFSGSGSGTDFSLTISSLQPEDIATYFCQEYNNAPRTFGQGTKVEIK | 15.050552 | 13.373676 | 230 | 214 | 125 | 105 | 125 | 105 | 38 | fab nds.1, heavy chain | fab nds.1, light chain | homo sapiens | homo sapiens | A | protein | vasodilator-stimulated phosphoprotein, neuraminidase chimera | homo sapiens | 52 | 13 | 0.68 | HL | train |
8gau_M_N | 8gau | structure of human nds.1 fab and 1g01 fab in complex with influenza virus neuraminidase from a/indiana/10/2011 (h3n2v) | no | viral protein/immune system | 2023-02-23 | 2024-02-28 | electron microscopy | 3.6 | N.A. | N.A. | 38430907 | 10.1016/j.immuni.2024.02.003 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | M | N | DEVQLVESGGRALRPGGSLRLSCAASGFKFDDYAMSWVRQVPGKGLEFVSGLNWNGDITAYTDSVKGRFTVSRDNAKNSLYLHINSPKPEDTALYYCARTSSWGDYTRGPEPKITWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCHHHHHH | DDIQLTQSPSFLSASVGDRITITCRASQGIDGYLAWYQQRPGKAPNLLIYAASLLQSGVPSRFSGSGYGTEFTLTISSLQPEDFATYYCQHLDSYPLFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVESGGRALRPGGSLRLSCAASGFKFDDYAMSWVRQVPGKGLEFVSGLNWNGDITAYTDSVKGRFTVSRDNAKNSLYLHINSPKPEDTALYYCARTSSWGDYTRGPEPKITWYFDLWGRGTLVTV | DIQLTQSPSFLSASVGDRITITCRASQGIDGYLAWYQQRPGKAPNLLIYAASLLQSGVPSRFSGSGYGTEFTLTISSLQPEDFATYYCQHLDSYPLFTFGPGTKVDIK | 15.132158 | 13.760962 | 240 | 216 | 127 | 108 | 127 | 108 | 49 | fab 1g01, heavy chain | fab 1g01, light chain | homo sapiens | homo sapiens | A | protein | vasodilator-stimulated phosphoprotein, neuraminidase chimera | homo sapiens | 50 | 18 | 0.9 | HL | train |
8gav_H_L | 8gav | structure of human nds.3 fab in complex with influenza virus neuraminidase from a/darwin/09/2021 (h3n2) | no | viral protein/immune system | 2023-02-23 | 2024-02-28 | electron microscopy | 2.7 | N.A. | N.A. | 38430907 | 10.1016/j.immuni.2024.02.003 | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV2 | H | L | EVQLVESGGGLVKPGGSLRLSCAASGFTFSDYSMTWIRQIPGKGLEWLSYTTSSGRPIFYADSVKGRFTMSRDNAKMSVYLQMNSLRDADSAVYYCARGDPHYIWGTYLDSWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK | QSALTQPPSASGSPGQSVTISCTGTTSDFGDHNYVSWYQQRPGEAPKLIIYDVSKRPSGVPDRFSGSKSGNTASLTVSRLQADDEANYYCSSIEGSNTLLFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGGGLVKPGGSLRLSCAASGFTFSDYSMTWIRQIPGKGLEWLSYTTSSGRPIFYADSVKGRFTMSRDNAKMSVYLQMNSLRDADSAVYYCARGDPHYIWGTYLDSWGPGTLVTVSS | SALTQPPSASGSPGQSVTISCTGTTSDFGDHNYVSWYQQRPGEAPKLIIYDVSKRPSGVPDRFSGSKSGNTASLTVSRLQADDEANYYCSSIEGSNTLLFGGGTKLT | 14.138592 | 13.461792 | 227 | 216 | 122 | 107 | 122 | 107 | 40 | fab nds.3, heavy chain | fab nds.3, light chain | homo sapiens | homo sapiens | A | protein | neuraminidase | influenza a virus | 55 | 23 | 0.85 | HL | train |
8gb5_B_C | 8gb5 | crystal structure of sars-cov-2 receptor binding domain in complex with neutralizing antibody 25f9 | no | immune system | 2023-02-24 | 2023-05-24 | x-ray diffraction | 3.35 | 0.32 | 0.275 | 37163615 | 10.1126/scitranslmed.adg7404 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV1 | B | C | EVQLVESGGGLVQPGGSLRLSCSASGFRFSDYWINWVRQAPGKGLEWVGFIKTKADFGTPAYAESVKGRFSISRDDSKNTVYLQMNSLKTEDTAVYYCTRDRGILEWLIIEAGWFDVWGPGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | QSVLTQPPSASGAPGQRVTISCTGSSSNIGAGHYVSWYQQLPGTAPKLLIHENDKRPSGVSDRFSGSRSGASASLTITGLQSGDEADYYCSVWDRSLNTLFGGGTRVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGGGLVQPGGSLRLSCSASGFRFSDYWINWVRQAPGKGLEWVGFIKTKADFGTPAYAESVKGRFSISRDDSKNTVYLQMNSLKTEDTAVYYCTRDRGILEWLIIEAGWFDVWGPGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | SVLTQPPSASGAPGQRVTISCTGSSSNIGAGHYVSWYQQLPGTAPKLLIHENDKRPSGVSDRFSGSRSGASASLTITGLQSGDEADYYCSVWDRSLNTLFGGGTRVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC | 25.61276 | 20.511406 | 231 | 216 | 227 | 214 | 231 | 214 | 105 | 25f9 heavy chain | 25f9 light chain | macaca mulatta | macaca mulatta | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 47 | 20 | 0.95 | HL | train |
8gb5_F_E | 8gb5 | crystal structure of sars-cov-2 receptor binding domain in complex with neutralizing antibody 25f9 | no | immune system | 2023-02-24 | 2023-05-24 | x-ray diffraction | 3.35 | 0.32 | 0.275 | 37163615 | 10.1126/scitranslmed.adg7404 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV1 | F | E | EVQLVESGGGLVQPGGSLRLSCSASGFRFSDYWINWVRQAPGKGLEWVGFIKTKADFGTPAYAESVKGRFSISRDDSKNTVYLQMNSLKTEDTAVYYCTRDRGILEWLIIEAGWFDVWGPGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | QSVLTQPPSASGAPGQRVTISCTGSSSNIGAGHYVSWYQQLPGTAPKLLIHENDKRPSGVSDRFSGSRSGASASLTITGLQSGDEADYYCSVWDRSLNTLFGGGTRVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGGGLVQPGGSLRLSCSASGFRFSDYWINWVRQAPGKGLEWVGFIKTKADFGTPAYAESVKGRFSISRDDSKNTVYLQMNSLKTEDTAVYYCTRDRGILEWLIIEAGWFDVWGPGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS | QSVLTQPPSASGAPGQRVTISCTGSSSNIGAGHYVSWYQQLPGTAPKLLIHENDKRPSGVSDRFSGSRSGASASLTITGLQSGDEADYYCSVWDRSLNTLFGGGTRVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 25.517195 | 20.355972 | 231 | 216 | 227 | 213 | 230 | 213 | 101 | 25f9 heavy chain | 25f9 light chain | macaca mulatta | macaca mulatta | D | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 47 | 20 | 0.95 | HL | train |
8gb5_I_H | 8gb5 | crystal structure of sars-cov-2 receptor binding domain in complex with neutralizing antibody 25f9 | no | immune system | 2023-02-24 | 2023-05-24 | x-ray diffraction | 3.35 | 0.32 | 0.275 | 37163615 | 10.1126/scitranslmed.adg7404 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV1 | I | H | EVQLVESGGGLVQPGGSLRLSCSASGFRFSDYWINWVRQAPGKGLEWVGFIKTKADFGTPAYAESVKGRFSISRDDSKNTVYLQMNSLKTEDTAVYYCTRDRGILEWLIIEAGWFDVWGPGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | QSVLTQPPSASGAPGQRVTISCTGSSSNIGAGHYVSWYQQLPGTAPKLLIHENDKRPSGVSDRFSGSRSGASASLTITGLQSGDEADYYCSVWDRSLNTLFGGGTRVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGGGLVQPGGSLRLSCSASGFRFSDYWINWVRQAPGKGLEWVGFIKTKADFGTPAYAESVKGRFSISRDDSKNTVYLQMNSLKTEDTAVYYCTRDRGILEWLIIEAGWFDVWGPGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | SVLTQPPSASGAPGQRVTISCTGSSSNIGAGHYVSWYQQLPGTAPKLLIHENDKRPSGVSDRFSGSRSGASASLTITGLQSGDEADYYCSVWDRSLNTLFGGGTRVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC | 25.56176 | 20.514507 | 231 | 216 | 227 | 214 | 231 | 214 | 100 | 25f9 heavy chain | 25f9 light chain | macaca mulatta | macaca mulatta | G | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 46 | 20 | 0.95 | HL | train |
8gb5_L_K | 8gb5 | crystal structure of sars-cov-2 receptor binding domain in complex with neutralizing antibody 25f9 | no | immune system | 2023-02-24 | 2023-05-24 | x-ray diffraction | 3.35 | 0.32 | 0.275 | 37163615 | 10.1126/scitranslmed.adg7404 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV1 | L | K | EVQLVESGGGLVQPGGSLRLSCSASGFRFSDYWINWVRQAPGKGLEWVGFIKTKADFGTPAYAESVKGRFSISRDDSKNTVYLQMNSLKTEDTAVYYCTRDRGILEWLIIEAGWFDVWGPGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | QSVLTQPPSASGAPGQRVTISCTGSSSNIGAGHYVSWYQQLPGTAPKLLIHENDKRPSGVSDRFSGSRSGASASLTITGLQSGDEADYYCSVWDRSLNTLFGGGTRVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGGGLVQPGGSLRLSCSASGFRFSDYWINWVRQAPGKGLEWVGFIKTKADFGTPAYAESVKGRFSISRDDSKNTVYLQMNSLKTEDTAVYYCTRDRGILEWLIIEAGWFDVWGPGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | SVLTQPPSASGAPGQRVTISCTGSSSNIGAGHYVSWYQQLPGTAPKLLIHENDKRPSGVSDRFSGSRSGASASLTITGLQSGDEADYYCSVWDRSLNTLFGGGTRVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTE | 25.696255 | 20.445288 | 231 | 216 | 228 | 213 | 231 | 213 | 100 | 25f9 heavy chain | 25f9 light chain | macaca mulatta | macaca mulatta | J | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 48 | 20 | 0.95 | HL | train |
8gb6_H_L | 8gb6 | crystal structure of sars-cov-2 receptor binding domain in complex with neutralizing antibody 21b6 | no | immune system | 2023-02-24 | 2023-05-24 | x-ray diffraction | 1.75 | 0.221 | 0.182 | 37163615 | 10.1126/scitranslmed.adg7404 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EVRLVESGGGLVQPGGSLRLSCAASGFTFSDYYISWVRQAPGRGPEWVGFIRNVLYRGTTEYAPSVKGRFIISRDDSRAIASLQMNGLKADDTAVYYCALGASGTDRDWFDVWGPGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQMTQSPSSLSASVGDTVTITCRASQDISNSLAWYQQKPGKAPKALIYYASNLESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHNNYPFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVRLVESGGGLVQPGGSLRLSCAASGFTFSDYYISWVRQAPGRGPEWVGFIRNVLYRGTTEYAPSVKGRFIISRDDSRAIASLQMNGLKADDTAVYYCALGASGTDRDWFDVWGPGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQMTQSPSSLSASVGDTVTITCRASQDISNSLAWYQQKPGKAPKALIYYASNLESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQHNNYPFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 21.34966 | 23.403845 | 226 | 214 | 226 | 213 | 226 | 213 | 108 | 21b6 heavy chain | 21b6 light chain | macaca mulatta | macaca mulatta | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 50 | 21 | 0.81 | HL | train |
8gb7_H_L | 8gb7 | crystal structure of sars-cov-2 receptor binding domain in complex with neutralizing antibody 20a7 | no | immune system | 2023-02-24 | 2023-05-24 | x-ray diffraction | 2.57 | 0.245 | 0.204 | 37163615 | 10.1126/scitranslmed.adg7404 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | H | L | DVQLVESGGGLVKPGGSLRLSCVASGFTFSNSEMHWVRQAPGKGLEWVSVISESGETTHYADSVKGRFTISRDNANNLLLLQMNSLRADDTAVYYCTRYNWNNRVYALDSWGQGVVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPATLSLSPGEGASLSCRASQTVIGSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISSLEPEDFAVYYCQQYGNWPLTFGPGTRLDIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | DVQLVESGGGLVKPGGSLRLSCVASGFTFSNSEMHWVRQAPGKGLEWVSVISESGETTHYADSVKGRFTISRDNANNLLLLQMNSLRADDTAVYYCTRYNWNNRVYALDSWGQGVVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | EIVLTQSPATLSLSPGEGASLSCRASQTVIGSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISSLEPEDFAVYYCQQYGNWPLTFGPGTRLDIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 22.42081 | 22.309072 | 224 | 214 | 215 | 211 | 222 | 211 | 92 | 20a7 heavy chain | 20a7 light chain | macaca mulatta | macaca mulatta | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 41 | 18 | 0.86 | HL | train |
8iiu_A | 8iiu | anti-vegf nanobody | no | antitumor protein | 2023-02-24 | 2023-12-27 | x-ray diffraction | 1.27 | 0.187 | 0.167 | 38023710 | 10.1002/btm2.10523 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | A | N.A. | MDVQLVESGGGLVQPGGSLRLSCAASGRTFSSYSMGWFRQAPGKEREFVVAISKGGYKYDAVSLEGRFTISRDNAKNTVYLQINSLRPEDTAVYYCASSRAYGSSRLRLADTYEYWGQGTLVTVSS | N.A. | LVESGGGLVQPGGSLRLSCAASGRTFSSYSMGWFRQAPGKEREFVVAISKGGYKYDAVSLEGRFTISRDNAKNTVYLQINSLRPEDTAVYYCASSRAYGSSRLRLADTYEYWGQGTLVTVSS | N.A. | 13.614221 | 0 | 126 | 0 | 122 | 0 | 122 | 0 | 0 | anti-vegf nanobody | N.A. | homo sapiens | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
8iiu_B | 8iiu | anti-vegf nanobody | no | antitumor protein | 2023-02-24 | 2023-12-27 | x-ray diffraction | 1.27 | 0.187 | 0.167 | 38023710 | 10.1002/btm2.10523 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | MDVQLVESGGGLVQPGGSLRLSCAASGRTFSSYSMGWFRQAPGKEREFVVAISKGGYKYDAVSLEGRFTISRDNAKNTVYLQINSLRPEDTAVYYCASSRAYGSSRLRLADTYEYWGQGTLVTVSS | N.A. | VQLVESGGGLVQPGGSLRLSCAASGRTFSSYSMGWFRQAPGKEREFVVAISKGGYKYDAVSLEGRFTISRDNAKNTVYLQINSLRPEDTAVYYCASSRAYGSSRLRLADTYEYWGQGTLVTVSS | N.A. | 13.623798 | 0 | 126 | 0 | 124 | 0 | 124 | 0 | 0 | anti-vegf nanobody | N.A. | homo sapiens | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
8ija_S | 8ija | cryo-em structure of human hcar2-gi complex with niacin | yes | membrane protein | 2023-02-26 | 2024-01-03 | electron microscopy | 2.69 | N.A. | N.A. | 38012147 | 10.1038/s41421-023-00610-7 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.266209 | 0 | 248 | 0 | 233 | 0 | 248 | 0 | 0 | scfv16 | N.A. | homo sapiens | N.A. | C;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 33;27 | 18;11 | 0.86;0.79 | H_only | train |
8ijd_S | 8ijd | cryo-em structure of human hcar2-gi complex with mk-6892 | yes | membrane protein | 2023-02-27 | 2024-01-03 | electron microscopy | 3.25 | N.A. | N.A. | 38012147 | 10.1038/s41421-023-00610-7 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.361391 | 0 | 248 | 0 | 233 | 0 | 248 | 0 | 0 | scfv16 | N.A. | homo sapiens | N.A. | B;C | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(i) subunit alpha-1 | homo sapiens;homo sapiens | 27;32 | 11;18 | 0.79;0.9 | H_only | train |
8gbw_H_L | 8gbw | crystal structure of pc39-23d, an anti-hiv broadly neutralizing antibody | no | immune system | 2023-02-28 | 2023-06-07 | x-ray diffraction | 1.5 | 0.201 | 0.182 | 37384622 | 10.1371/journal.ppat.1011416 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV3 | H | L | QVQLKQWGAGLVKPSETLSLTCTVHGDTLSDYSWNWGVSRSDYYWSWIRQPPGKGLEWIGEINRSGSTQYHPSLKSRVKIVIEVSKNQFSLELSSVTAADTAVYYCARGRRSRQWIGDLPPGNHGLDVWGQGIPVSVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD | VHEIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQHKPGQAPRLLISDVYRRATGVPDRFSASGSGTDFTLTISRLEPEDFAVYYCQQYGISSPFNFGQGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLKQWGAGLVKPSETLSLTCTVHGDTLSDYSWNWGVSRSDYYWSWIRQPPGKGLEWIGEINRSGSTQYHPSLKSRVKIVIEVSKNQFSLELSSVTAADTAVYYCARGRRSRQWIGDLPPGNHGLDVWGQGIPVSVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS | VHEIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQHKPGQAPRLLISDVYRRATGVPDRFSASGSGTDFTLTISRLEPEDFAVYYCQQYGISSPFNFGQGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 24.276098 | 22.574646 | 243 | 218 | 240 | 217 | 240 | 217 | 111 | pc39-23d fab heavy chain | pc39-23d fab light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8gbx_H_L | 8gbx | crystal structure of pc39-50i, an anti-hiv broadly neutralizing antibody | no | immune system | 2023-02-28 | 2023-06-07 | x-ray diffraction | 2.7 | 0.243 | 0.212 | 37384622 | 10.1371/journal.ppat.1011416 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV3 | H | L | QVQLQQWGAGLLKPSETLSVTCAIYGDSLSDYSWKWGVSRDDYYWTWIRQSPGKRLEWIGEINRGGNTKYNPSLSSRVKMSIDASKNQFSLRMRSVTDTDTGIYYCARGRRSRQWIGDLPPGNQGLDVWGQGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD | VHEIVLTQSPVTLSLSPGERATLSCRASQSVSSSYLAWYQHKPGQAPRLLISDVYRRASGVPDRFSGSGSGTEFTLTISRLEPEDFAIYYCQQYGSSPPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQQWGAGLLKPSETLSVTCAIYGDSLSDYSWKWGVSRDDYYWTWIRQSPGKRLEWIGEINRGGNTKYNPSLSSRVKMSIDASKNQFSLRMRSVTDTDTGIYYCARGRRSRQWIGDLPPGNQGLDVWGQGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | VHEIVLTQSPVTLSLSPGERATLSCRASQSVSSSYLAWYQHKPGQAPRLLISDVYRRASGVPDRFSGSGSGTEFTLTISRLEPEDFAIYYCQQYGSSPPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 24.032833 | 23.136917 | 243 | 218 | 242 | 218 | 242 | 218 | 122 | pc39-50i fab heavy chain | pc39-50i fab light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8gby_H_L | 8gby | crystal structure of pc39-50e, an anti-hiv broadly neutralizing antibody | no | immune system | 2023-02-28 | 2023-06-07 | x-ray diffraction | 2.35 | 0.269 | 0.236 | 37384622 | 10.1371/journal.ppat.1011416 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV3 | H | L | QVQLKQWGAGLLKPSETLSLTCAIYGESFTGSWNDQLWNWIRQPPGKGLEWIGEINHSGDIKYASSLKSRATVSADRSKNQFSLKLRSVSGADTATYYCARGRRAVRWWAVEPPANYGFDVWSQGTPVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD | VHEIVLTQSPGTLSLSPGEKATLSCRASQSIASTYLAWYQQKPGQAPRLLLHQGYNRATGIPDRFSGSGSGTVYTLTISGLEPDDFAVYYCQHLGTSPPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLKQWGAGLLKPSETLSLTCAIYGESFTGSWNDQLWNWIRQPPGKGLEWIGEINHSGDIKYASSLKSRATVSADRSKNQFSLKLRSVSGADTATYYCARGRRAVRWWAVEPPANYGFDVWSQGTPVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | VHEIVLTQSPGTLSLSPGEKATLSCRASQSIASTYLAWYQQKPGQAPRLLLHQGYNRATGIPDRFSGSGSGTVYTLTISGLEPDDFAVYYCQHLGTSPPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 23.456112 | 22.60226 | 236 | 218 | 223 | 217 | 233 | 217 | 103 | pc39-50e fab heavy chain | pc39-50e fab light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8gbz_H_L | 8gbz | crystal structure of pc39-55c, an anti-hiv broadly neutralizing antibody | no | immune system | 2023-02-28 | 2023-06-07 | x-ray diffraction | 1.97 | 0.265 | 0.219 | 37384622 | 10.1371/journal.ppat.1011416 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV3 | H | L | QVQLKQWGAGLLKPSETLSLTCAIYGESFTGSWNDQLWNWIRQPPGKGLEWIGEINHNGDINYASSLKSRATVSADRSKNQFSLRLRSVSDADTATYYCARGRRAIQWWAVEPPANYGFDVWSQGTPVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD | EIVLTQSPGTLSLSPGEKATLSCRASQTIASTYLAWYQQKPGQPPRLLLHKGYNRATGIPDRFSGSGSGTVYTLTISGLEPDDFAFYYCQHLGTSPPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLKQWGAGLLKPSETLSLTCAIYGESFTGSWNDQLWNWIRQPPGKGLEWIGEINHNGDINYASSLKSRATVSADRSKNQFSLRLRSVSDADTATYYCARGRRAIQWWAVEPPANYGFDVWSQGTPVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS | IVLTQSPGTLSLSPGEKATLSCRASQTIASTYLAWYQQKPGQPPRLLLHKGYNRATGIPDRFSGSGSGTVYTLTISGLEPDDFAFYYCQHLGTSPPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 23.168161 | 22.605654 | 236 | 216 | 223 | 215 | 234 | 215 | 105 | pc39-55c fab heavy chain | pc39-55c fab light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8gc0_H_L | 8gc0 | crystal structure of pc39-50l, an anti-hiv broadly neutralizing antibody | no | immune system | 2023-02-28 | 2023-06-07 | x-ray diffraction | 2.43 | 0.252 | 0.211 | 37384622 | 10.1371/journal.ppat.1011416 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV3 | H | L | QVQLQQWGAGLLNSSETLSLTCAIYGESFTGSWNDQLWNWIRQPPGKGLEWIGEIDHSENRRYQPSLKGRVTISVDRSKNQISLKMRAVSVADTAVYYCVRGRRATQWWAVEPPANYGFDVWGQGTPVSVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD | EIVLTQSPGTLSLSPGDRATLSCRASQTIASTYVAWYQQKPGQAPRLLLHQGYNRATGVPDRFSGSGSGTAYSLTISSLEPDDFAVYYCQHFGTSPPYSFGQGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQQWGAGLLNSSETLSLTCAIYGESFTGSWNDQLWNWIRQPPGKGLEWIGEIDHSENRRYQPSLKGRVTISVDRSKNQISLKMRAVSVADTAVYYCVRGRRATQWWAVEPPANYGFDVWGQGTPVSVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | IVLTQSPGTLSLSPGDRATLSCRASQTIASTYVAWYQQKPGQAPRLLLHQGYNRATGVPDRFSGSGSGTAYSLTISSLEPDDFAVYYCQHFGTSPPYSFGQGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 23.924711 | 22.101303 | 236 | 216 | 235 | 215 | 235 | 215 | 110 | pc39-50l fab heavy chain | pc39-50l fab light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8gc1_H_L | 8gc1 | crystal structure of the unmutated common ancestor (uca) of the pc39-1 anti-hiv broadly neutralizing antibody lineage | no | immune system | 2023-02-28 | 2023-06-07 | x-ray diffraction | 3.19 | 0.298 | 0.271 | 37384622 | 10.1371/journal.ppat.1011416 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV3 | H | L | QVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGRRSVTWFGDLPPGNYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQQWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARGRRSVTWFGDLPPGNYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.039423 | 22.852844 | 232 | 216 | 208 | 215 | 229 | 215 | 92 | pc39-1 uca fab heavy chain | pc39-1 uca fab light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8ijs_A | 8ijs | anti-vegf nanobody mutant | no | antitumor protein-immune system | 2023-02-28 | 2023-12-27 | x-ray diffraction | 1.75 | 0.22 | 0.201 | 38023710 | 10.1002/btm2.10523 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | A | N.A. | MDVQLVESGGGLVNPGGSLRLSCAASGRTFSSYSMGWFRQAPGKEREFVVAISKGGYKYDAVSLEGRFTISRDNAKNTVYLQINSLRPEDTAVYYCASSRAYGSSRLRLADTYEYWGQGTLVTVSS | N.A. | QLVESGGGLVNPGGSLRLSCAASGRTFSSYSMGWFRQAPGKEREFVVAISKGGYKYDAVSLEGRFTISRDNAKNTVYLQINSLRPEDTAVYYCASSRAYGSSRLRLADTYEYWGQGTLVTVSS | N.A. | 13.344005 | 0 | 126 | 0 | 117 | 0 | 123 | 0 | 0 | anti-vegf nanobody | N.A. | homo sapiens | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
8ijz_A | 8ijz | anti-vegf mutant | no | antitumor protein-immune system | 2023-02-28 | 2023-12-27 | electron crystallography | 2.1 | 0.299 | 0.196 | 38023710 | 10.1002/btm2.10523 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | A | N.A. | MDVQLVESGGGLVQPGGSLRLSCAASGRTFSSYSMGWFRQAPGKAREFVVAISKGGYKYDAVSLEGRFTISRDNAKNTVYLQINSLRPEDTAVYYCASSRAYGSSRLRLADTYEYWGQGTLVTVSS | N.A. | QLVESGGGLVQPGGSLRLSCAASGRTFSSYSMGWFRQAPGKAREFVVAISKGGYKYDAVSLEGRFTISRDNAKNTVYLQINSLRPEDTAVYYCASSRAYGSSRLRLADTYEYWGQGTLVTVSS | N.A. | 13.568842 | 0 | 126 | 0 | 123 | 0 | 123 | 0 | 0 | anti-vegf nanobody | N.A. | homo sapiens | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
8coe_B | 8coe | complement c5 in complex with the lcp0195 nanobody | no | immune system | 2023-02-28 | 2024-01-03 | x-ray diffraction | 4.2 | 0.269 | 0.248 | 38142486 | 10.1016/j.molimm.2023.12.004 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGRAFSDYAMAWFRQAPGQEREFVAGIGWSGGDTLYADSVRGRFTNSRDNSKNTLYLQMNSLRAEDTAVYYCAARQGQYIYSSMRSDSYDYWGQGTLVTVSSHHHHHH | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGRAFSDYAMAWFRQAPGQEREFVAGIGWSGGDTLYADSVRGRFTNSRDNSKNTLYLQMNSLRAEDTAVYYCAARQGQYIYSSMRSDSYDYWGQGTLVTV | N.A. | 13.61897 | 0 | 132 | 0 | 124 | 0 | 124 | 0 | 0 | lcp0195 | N.A. | lama glama | N.A. | C | protein | complement c5 beta chain | homo sapiens | 53 | 17 | 0.85 | H_only | train |
8il3_B_A | 8il3 | cryo-em structure of cd38 in complex with ftl004 | no | hydrolase | 2023-03-01 | 2023-03-29 | electron microscopy | 3.86 | N.A. | N.A. | 36581954 | 10.1186/s13045-022-01395-0 | 0 | auth_asym_id | FabH:FabL | IGHV7 | IGKV7 | B | A | QVQLVQSGSELKKPGASVKVSCKASGYTFTDYNVHWIRQAPGQGLEWIGYFYPRNGATHYNQKFTGRAVLSADTSVSTAYLQISSLKAEDTAVYFCARGETPGTFPYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK | DIVLTQSPASLAVSPGQRATITCRASESVDNFGITFMHWYQQKPGQPPKLLIYRASNLESGVPARFSGSGSRTDFTLTINPVEANDTANYYCQQSSKDPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGSELKKPGASVKVSCKASGYTFTDYNVHWIRQAPGQGLEWIGYFYPRNGATHYNQKFTGRAVLSADTSVSTAYLQISSLKAEDTAVYFCARGETPGTFPYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK | DIVLTQSPASLAVSPGQRATITCRASESVDNFGITFMHWYQQKPGQPPKLLIYRASNLESGVPARFSGSGSRTDFTLTINPVEANDTANYYCQQSSKDPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 21.504692 | 24.237127 | 215 | 218 | 215 | 218 | 215 | 218 | 95 | heavy chain | light chain | homo sapiens | homo sapiens | C | protein | adp-ribosyl cyclase/cyclic adp-ribose hydrolase 1 | homo sapiens | 31 | 15 | 0.83 | HL | train |
8gcm_E | 8gcm | cryo-em structure of the prostaglandin e receptor ep4 coupled to g protein | no | membrane protein | 2023-03-02 | 2024-01-03 | electron microscopy | 3.5 | N.A. | N.A. | 37478163 | 10.1073/pnas.2216329120 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKGS | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.670692 | 0 | 250 | 0 | 231 | 0 | 246 | 0 | 0 | scfv16 | N.A. | homo sapiens | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 30;19 | 16;6 | 0.84;0.75 | H_only | train |
8gd9_N | 8gd9 | cryo-em structure of the prostaglandin e2 receptor 4 coupled to g protein | no | signaling protein | 2023-03-03 | 2024-01-10 | electron microscopy | 3.2 | N.A. | N.A. | 37478163 | 10.1073/pnas.2216329120 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVS | N.A. | 13.812254 | 0 | 128 | 0 | 127 | 0 | 127 | 0 | 0 | nb35 | N.A. | lama glama | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 45;30 | 15;11 | 0.65;0.69 | H_only | train |
8gda_N | 8gda | cryo-em structure of the prostaglandin e2 receptor 4 coupled to g protein | no | signaling protein | 2023-03-03 | 2024-01-10 | electron microscopy | 3.3 | N.A. | N.A. | 37478163 | 10.1073/pnas.2216329120 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 13.967293 | 0 | 128 | 0 | 128 | 0 | 128 | 0 | 0 | nb35 | N.A. | lama glama | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 46;31 | 15;11 | 0.6;0.73 | H_only | train |
8ilx_C | 8ilx | mcherry-lam3 complex | yes | fluorescent protein/immune system | 2023-03-05 | 2023-06-21 | x-ray diffraction | 3.29 | 0.312 | 0.264 | 37108116 | 10.3390/ijms24086952 | 0 | auth_asym_id | VH | IGHV3 | N.A. | C | N.A. | GSAQVQLVQSGGGLVQAGGSLRLSCAASGRTFSDIAVGWFRQTPGKEREFVAAISWSGLIINYGDSVEDRFTISRDNAKSAVYLQMNSLKPEDTAVYYCAARIGMNYYYAREIEYPYWGQGTQVTVSKCY | N.A. | QVQLVQSGGGLVQAGGSLRLSCAASGRTFSDIAVGWFRQTPGKEREFVAAISWSGLIINYGDSVEDRFTISRDNAKSAVYLQMNSLKPEDTAVYYCAARIGMNYYYAREIEYPYWGQGTQVTV | N.A. | 13.427176 | 0 | 130 | 0 | 122 | 0 | 123 | 0 | 0 | lam3 | N.A. | camelus bactrianus | N.A. | A | protein | mcherry fluorescent protein | anaplasma marginale | 35 | 13 | 0.87 | H_only | train |
8ilx_D | 8ilx | mcherry-lam3 complex | yes | fluorescent protein/immune system | 2023-03-05 | 2023-06-21 | x-ray diffraction | 3.29 | 0.312 | 0.264 | 37108116 | 10.3390/ijms24086952 | 0 | auth_asym_id | VH | IGHV3 | N.A. | D | N.A. | GSAQVQLVQSGGGLVQAGGSLRLSCAASGRTFSDIAVGWFRQTPGKEREFVAAISWSGLIINYGDSVEDRFTISRDNAKSAVYLQMNSLKPEDTAVYYCAARIGMNYYYAREIEYPYWGQGTQVTVSKCY | N.A. | QVQLVQSGGGLVQAGGSLRLSCAASGRTFSDIAVGWFRQTPGKEREFVAAISWSGLIINYGDSVEDRFTISRDNAKSAVYLQMNSLKPEDTAVYYCAARIGMNYYYAREIEYPYWGQGTQVTV | N.A. | 13.527228 | 0 | 130 | 0 | 122 | 0 | 123 | 0 | 0 | lam3 | N.A. | camelus bactrianus | N.A. | B | protein | mcherry fluorescent protein | anaplasma marginale | 35 | 13 | 0.87 | H_only | train |
8im0_B | 8im0 | mcherry-lam8 complex | yes | fluorescent protein/immune system | 2023-03-05 | 2023-06-21 | x-ray diffraction | 1.31 | 0.19 | 0.178 | 37108116 | 10.3390/ijms24086952 | 0 | auth_asym_id | VH | IGHV3 | N.A. | B | N.A. | GSAQVQLVESGGGLVQAGGSLRLSCAVSGRPFSEYNLGWFRQAPGKEREFVARIRSSGTTVYTDSVKGRFSASRDNAKNMGYLQLNSLEPEDTAVYYCAMSRVDTDSPAFYDYWGQGTQVTVSTPRS | N.A. | AQVQLVESGGGLVQAGGSLRLSCAVSGRPFSEYNLGWFRQAPGKEREFVARIRSSGTTVYTDSVKGRFSASRDNAKNMGYLQLNSLEPEDTAVYYCAMSRVDTDSPAFYDYWGQGTQVTVSTPR | N.A. | 14.026751 | 0 | 127 | 0 | 124 | 0 | 124 | 0 | 0 | lam8 | N.A. | camelus bactrianus | N.A. | A | protein | mcherry fluorescent protein | anaplasma marginale | 40 | 17 | 0.81 | H_only | train |
8im1_B | 8im1 | mcherry-lam1 complex | yes | fluorescent protein/immune system | 2023-03-05 | 2023-06-21 | x-ray diffraction | 2.05 | 0.235 | 0.204 | 37108116 | 10.3390/ijms24086952 | 0 | auth_asym_id | VH | IGHV3 | N.A. | B | N.A. | GSAQVQLVESGGGLVQAGDSLRLSCAASGRTFENYAMGWFRQAPGKEREFVGAVSWGGGRTYYADNVKGRFTISRDNAKKNTVYLQMNSLKPEDTAVYYCAAKSVLTIATMRVPDEYNYWGQGTQVTVS | N.A. | QVQLVESGGGLVQAGDSLRLSCAASGRTFENYAMGWFRQAPGKEREFVGAVSWGGGRTYYADNVKGRFTISRDNAKKNTVYLQMNSLKPEDTAVYYCAAKSVLTIATMRVPDEYNYWGQGTQVTVS | N.A. | 13.740432 | 0 | 129 | 0 | 126 | 0 | 126 | 0 | 0 | lam1 | N.A. | camelus bactrianus | N.A. | A | protein | mcherry fluorescent protein | anaplasma marginale | 37 | 16 | 0.89 | H_only | train |
8im1_D | 8im1 | mcherry-lam1 complex | yes | fluorescent protein/immune system | 2023-03-05 | 2023-06-21 | x-ray diffraction | 2.05 | 0.235 | 0.204 | 37108116 | 10.3390/ijms24086952 | 0 | auth_asym_id | VH | IGHV3 | N.A. | D | N.A. | GSAQVQLVESGGGLVQAGDSLRLSCAASGRTFENYAMGWFRQAPGKEREFVGAVSWGGGRTYYADNVKGRFTISRDNAKKNTVYLQMNSLKPEDTAVYYCAAKSVLTIATMRVPDEYNYWGQGTQVTVS | N.A. | VQLVESGGGLVQAGDSLRLSCAASGRTFENYAMGWFRQAPGKEREFVGAVSWGGGRTYYADNVKGRFTISRDNAKKNTVYLQMNSLKPEDTAVYYCAAKSVLTIATMRVPDEYNYWGQGTQVTVS | N.A. | 13.72252 | 0 | 129 | 0 | 125 | 0 | 125 | 0 | 0 | lam1 | N.A. | camelus bactrianus | N.A. | C | protein | mcherry fluorescent protein | anaplasma marginale | 31 | 13 | 0.93 | H_only | train |
8im1_H | 8im1 | mcherry-lam1 complex | yes | fluorescent protein/immune system | 2023-03-05 | 2023-06-21 | x-ray diffraction | 2.05 | 0.235 | 0.204 | 37108116 | 10.3390/ijms24086952 | 0 | auth_asym_id | VH | IGHV3 | N.A. | H | N.A. | GSAQVQLVESGGGLVQAGDSLRLSCAASGRTFENYAMGWFRQAPGKEREFVGAVSWGGGRTYYADNVKGRFTISRDNAKKNTVYLQMNSLKPEDTAVYYCAAKSVLTIATMRVPDEYNYWGQGTQVTVS | N.A. | QVQLVESGGGLVQAGDSLRLSCAASGRTFENYAMGWFRQAPGKEREFVGAVSWGGGRTYYADNVKGRFTISRDNAKKNTVYLQMNSLKPEDTAVYYCAAKSVLTIATMRVPDEYNYWGQGTQVTVS | N.A. | 13.782692 | 0 | 129 | 0 | 126 | 0 | 126 | 0 | 0 | lam1 | N.A. | camelus bactrianus | N.A. | C;G | protein;protein | mcherry fluorescent protein;mcherry fluorescent protein | anaplasma marginale;anaplasma marginale | 22;33 | 5;15 | 0.42;0.94 | H_only | train |
8im1_F | 8im1 | mcherry-lam1 complex | yes | fluorescent protein/immune system | 2023-03-05 | 2023-06-21 | x-ray diffraction | 2.05 | 0.235 | 0.204 | 37108116 | 10.3390/ijms24086952 | 0 | auth_asym_id | VH | IGHV3 | N.A. | F | N.A. | GSAQVQLVESGGGLVQAGDSLRLSCAASGRTFENYAMGWFRQAPGKEREFVGAVSWGGGRTYYADNVKGRFTISRDNAKKNTVYLQMNSLKPEDTAVYYCAAKSVLTIATMRVPDEYNYWGQGTQVTVS | N.A. | VQLVESGGGLVQAGDSLRLSCAASGRTFENYAMGWFRQAPGKEREFVGAVSWGGGRTYYADNVKGRFTISRDNAKKNTVYLQMNSLKPEDTAVYYCAAKSVLTIATMRVPDEYNYWGQGTQVTVS | N.A. | 13.441422 | 0 | 129 | 0 | 120 | 0 | 125 | 0 | 0 | lam1 | N.A. | camelus bactrianus | N.A. | E | protein | mcherry fluorescent protein | anaplasma marginale | 33 | 14 | 0.93 | H_only | train |
8gdr_H_J | 8gdr | sars-cov2 s protein structure in complex with neutralizing monoclonal antibody 002-s21b10 | no | viral protein | 2023-03-06 | 2024-03-13 | electron microscopy | 3.6 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV2 | IGLV2 | H | J | QITLKESGPTLVKSTQTLTLTCTFSGFSLSTYGVGVGWIRQPPGKALEWLALIYWDDDKRYTPSLKSRLTITKDTSKNQVVLTMTNMDPLDTATYYCAQHTVPTIFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | QSALTQPASVSGSPEQSITISCSGTSRDIGGYNYVAWYQHHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNMASLTISGLQAEDKADYYCTSYTTGSTVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QITLKESGPTLVKSTQTLTLTCTFSGFSLSTYGVGVGWIRQPPGKALEWLALIYWDDDKRYTPSLKSRLTITKDTSKNQVVLTMTNMDPLDTATYYCAQHTVPTIFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | QSALTQPASVSGSPEQSITISCSGTSRDIGGYNYVAWYQHHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNMASLTISGLQAEDKADYYCTSYTTGSTVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | 24.666977 | 21.405891 | 224 | 216 | 224 | 216 | 224 | 216 | 52 | monoclonal antibody 002-s21b10 heavy chain variable domain | monoclonal antibody 002-s21b10 light chain variable domain | homo sapiens | homo sapiens | E | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 38 | 17 | 0.85 | HL | train |
8gdr_C_D | 8gdr | sars-cov2 s protein structure in complex with neutralizing monoclonal antibody 002-s21b10 | no | viral protein | 2023-03-06 | 2024-03-13 | electron microscopy | 3.6 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV2 | IGLV2 | C | D | QITLKESGPTLVKSTQTLTLTCTFSGFSLSTYGVGVGWIRQPPGKALEWLALIYWDDDKRYTPSLKSRLTITKDTSKNQVVLTMTNMDPLDTATYYCAQHTVPTIFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | QSALTQPASVSGSPEQSITISCSGTSRDIGGYNYVAWYQHHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNMASLTISGLQAEDKADYYCTSYTTGSTVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QITLKESGPTLVKSTQTLTLTCTFSGFSLSTYGVGVGWIRQPPGKALEWLALIYWDDDKRYTPSLKSRLTITKDTSKNQVVLTMTNMDPLDTATYYCAQHTVPTIFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | QSALTQPASVSGSPEQSITISCSGTSRDIGGYNYVAWYQHHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNMASLTISGLQAEDKADYYCTSYTTGSTVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | 24.24457 | 21.048342 | 224 | 216 | 224 | 216 | 224 | 216 | 100 | monoclonal antibody 002-s21b10 heavy chain variable domain | monoclonal antibody 002-s21b10 light chain variable domain | homo sapiens | homo sapiens | E;F | protein;protein | spike glycoprotein;spike glycoprotein | severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2 | 17;39 | 5;18 | 0.56;0.82 | HL | train |
8gf2_C_D | 8gf2 | crystal structure of sars-cov-2 receptor binding domain in complex with antibodies ecr3022.20 and cc12.3 | no | immune system/viral protein | 2023-03-07 | 2023-08-23 | x-ray diffraction | 2.85 | 0.252 | 0.209 | 37582161 | 10.1126/scisignal.abk3516 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | C | D | QVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSKSTLYLQMNSLRVEDTAVYYCARDFGDFYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS | QVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSKSTLYLQMNSLRVEDTAVYYCARDFGDFYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 21.158619 | 23.05424 | 220 | 215 | 213 | 211 | 218 | 211 | 93 | cc12.3 fab heavy chain | cc12.3 fab light chain | homo sapiens | homo sapiens | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 57 | 20 | 0.77 | HL | train |
8gf2_H_L | 8gf2 | crystal structure of sars-cov-2 receptor binding domain in complex with antibodies ecr3022.20 and cc12.3 | no | immune system/viral protein | 2023-03-07 | 2023-08-23 | x-ray diffraction | 2.85 | 0.252 | 0.209 | 37582161 | 10.1126/scisignal.abk3516 | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGKV4 | H | L | QMQLVQSGTEVKKPGESLKISCKGSGYGFIWYWIGWVRQMPGKGLEWMGIIYPGDGETRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCAGGGGISTPMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQLTQSPDSLAVSLGERATINCKSSQSVLWSSINKNYLAWYQQKPGQPPKLLIYWASTPESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYKTPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS | QMQLVQSGTEVKKPGESLKISCKGSGYGFIWYWIGWVRQMPGKGLEWMGIIYPGDGETRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCAGGGGISTPMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | DIQLTQSPDSLAVSLGERATINCKSSQSVLWSSINKNYLAWYQQKPGQPPKLLIYWASTPESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYKTPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS | 22.33891 | 23.828596 | 222 | 221 | 218 | 221 | 221 | 221 | 107 | ecr3022.20 fab heavy chain | ecr3022.20 fab light chain | homo sapiens | homo sapiens | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 56 | 24 | 0.83 | HL | train |
8gf2_E_F | 8gf2 | crystal structure of sars-cov-2 receptor binding domain in complex with antibodies ecr3022.20 and cc12.3 | no | immune system/viral protein | 2023-03-07 | 2023-08-23 | x-ray diffraction | 2.85 | 0.252 | 0.209 | 37582161 | 10.1126/scisignal.abk3516 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | E | F | QVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSKSTLYLQMNSLRVEDTAVYYCARDFGDFYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS | QVQLVESGGGLIQPGGSLRLSCAASGFTVSSNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSKSTLYLQMNSLRVEDTAVYYCARDFGDFYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPRTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 21.586576 | 23.095457 | 220 | 215 | 220 | 213 | 220 | 213 | 99 | cc12.3 fab heavy chain | cc12.3 fab light chain | homo sapiens | homo sapiens | B | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 58 | 23 | 0.82 | HL | train |
8gf2_X_Y | 8gf2 | crystal structure of sars-cov-2 receptor binding domain in complex with antibodies ecr3022.20 and cc12.3 | no | immune system/viral protein | 2023-03-07 | 2023-08-23 | x-ray diffraction | 2.85 | 0.252 | 0.209 | 37582161 | 10.1126/scisignal.abk3516 | 0 | auth_asym_id | FabH:FabL | IGHV5 | IGKV4 | X | Y | QMQLVQSGTEVKKPGESLKISCKGSGYGFIWYWIGWVRQMPGKGLEWMGIIYPGDGETRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCAGGGGISTPMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQLTQSPDSLAVSLGERATINCKSSQSVLWSSINKNYLAWYQQKPGQPPKLLIYWASTPESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYKTPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS | QMQLVQSGTEVKKPGESLKISCKGSGYGFIWYWIGWVRQMPGKGLEWMGIIYPGDGETRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCAGGGGISTPMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQLTQSPDSLAVSLGERATINCKSSQSVLWSSINKNYLAWYQQKPGQPPKLLIYWASTPESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYKTPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.40298 | 23.623262 | 222 | 221 | 217 | 220 | 222 | 220 | 109 | ecr3022.20 fab heavy chain | ecr3022.20 fab light chain | homo sapiens | homo sapiens | B | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 55 | 23 | 0.79 | HL | train |
8cr9_A_B | 8cr9 | cryo-em structure of pcrv/fab(30-b8) | no | antimicrobial protein | 2023-03-08 | 2023-11-22 | electron microscopy | 4.2 | N.A. | N.A. | 37918395 | 10.1016/j.cell.2023.10.002 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | A | B | EGQLLESGGGLAQPGGSLRLSCTASGFTFSKNAMNWVRQAPGKRLEWVAGIIGNGSDTYYADSVKGRFTISRDNSKNTVSLQMNSLRAEDSAIYYCAKDRHPWRWLQLFDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | DIQLTQSPSTVSASLGDRVTITCRASQDIGSWLAWYQQKPGKAPKLLIYKASNVESGVPSRFSGSESGTEFTLTISSLQPDDVATYFCQYYNSYSHATVTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EGQLLESGGGLAQPGGSLRLSCTASGFTFSKNAMNWVRQAPGKRLEWVAGIIGNGSDTYYADSVKGRFTISRDNSKNTVSLQMNSLRAEDSAIYYCAKDRHPWRWLQLFDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | DIQLTQSPSTVSASLGDRVTITCRASQDIGSWLAWYQQKPGKAPKLLIYKASNVESGVPSRFSGSESGTEFTLTISSLQPDDVATYFCQYYNSYSHATVTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 22.734741 | 23.279432 | 222 | 217 | 222 | 217 | 222 | 217 | 95 | heavy chain | light chain | homo sapiens | homo sapiens | C | protein | maltose/maltodextrin-binding periplasmic protein,type iii secretion protein pcrv | pseudomonas aeruginosa | 31 | 8 | 0.62 | HL | train |
8crb_A_B | 8crb | cryo-em structure of pcrv/fab(11-e5) | no | antimicrobial protein | 2023-03-08 | 2023-11-22 | electron microscopy | 4.6 | N.A. | N.A. | 37918395 | 10.1016/j.cell.2023.10.002 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV1 | A | B | EVQLLESGGGLVQPGGSLRLSCAASGFSFSSYAMSWVRQAPGKGLEWVSAISGSGGITYYGDSAKGRFTISRDNSKNTLYLEMSSLRADDTAVYYCAQERYCDSGSCYERDPVFEYWGQGTRVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | QSVLTQPPSASGAPGQRVTISCSGSNSNIGTYFVYWYQQLPGTAPKVLIYRNDQRPSGVPDRISGSKSGTSASLAISGLRSEDEADYYCASWDASLRGYVFGPGTKVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLLESGGGLVQPGGSLRLSCAASGFSFSSYAMSWVRQAPGKGLEWVSAISGSGGITYYGDSAKGRFTISRDNSKNTLYLEMSSLRADDTAVYYCAQERYCDSGSCYERDPVFEYWGQGTRVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | QSVLTQPPSASGAPGQRVTISCSGSNSNIGTYFVYWYQQLPGTAPKVLIYRNDQRPSGVPDRISGSKSGTSASLAISGLRSEDEADYYCASWDASLRGYVFGPGTKVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | 24.8252 | 22.372852 | 227 | 216 | 227 | 216 | 227 | 216 | 86 | heavy chain | light chain | homo sapiens | homo sapiens | C | protein | maltose/maltodextrin-binding periplasmic protein,type iii secretion protein pcrv | pseudomonas aeruginosa | 30 | 16 | 0.89 | HL | train |
8gh4_H_L | 8gh4 | complex of adam 10 disentegrin cysteine rich domains with human monoclonal antibody | no | immune system | 2023-03-09 | 2023-08-30 | x-ray diffraction | 3.8 | 0.311 | 0.288 | 36917886 | 10.1016/j.biopha.2023.114494 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | QVQLVESGGGLVKPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDFYDSKIFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKT | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDVGVYYCMEGLKTPFTFGPGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVESGGGLVKPGGSLRLSCAASGFTFSDYYMSWIRQAPGKGLEWVSYISSSGSTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDFYDSKIFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDVGVYYCMEGLKTPFTFGPGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 21.512075 | 23.494959 | 225 | 214 | 224 | 214 | 224 | 214 | 89 | antibody heavy chain | antibody light chain | homo sapiens | homo sapiens | E | protein | disintegrin and metalloproteinase domain-containing protein 10 | bos taurus | 43 | 21 | 0.91 | HL | train |
8odx_H_L | 8odx | interleukin 12 receptor subunit beta-1 fn domains in complex with antagonistic fab4 fragment and vhh. | no | cytokine | 2023-03-09 | 2024-02-07 | x-ray diffraction | 4.4 | 0.311 | 0.28 | 38287195 | 10.1038/s41594-023-01190-6 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | MGWSCIILFLVATATGVHSQVQLVESGGGVVQPGRSLRLSCAASGFTFTSYGMSWVRQAPGKGLEWVAGISYDASDTEYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARSPDYIIDYGFDYWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCGHHHHHH | MGVKVLFALICIAVAEAAIQMTQSPSSLSASVGDRVTITCRASQGISSDLAWYQQKPGKAPKLLIYDASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYWWYPFTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVESGGGVVQPGRSLRLSCAASGFTFTSYGMSWVRQAPGKGLEWVAGISYDASDTEYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARSPDYIIDYGFDYWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | IQMTQSPSSLSASVGDRVTITCRASQGISSDLAWYQQKPGKAPKLLIYDASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQYWWYPFTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.777506 | 22.660378 | 250 | 231 | 220 | 212 | 220 | 212 | 88 | fab4 heavy chain | fab4 light chain | homo sapiens x mus musculus hybrid cell line | homo sapiens x mus musculus hybrid cell line | A | protein | interleukin-12 receptor subunit beta-1 | homo sapiens | 48 | 25 | 0.93 | HL | train |
8odx_K | 8odx | interleukin 12 receptor subunit beta-1 fn domains in complex with antagonistic fab4 fragment and vhh. | no | cytokine | 2023-03-09 | 2024-02-07 | x-ray diffraction | 4.4 | 0.311 | 0.28 | 38287195 | 10.1038/s41594-023-01190-6 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | K | N.A. | MGKYLLPTAAAGLLLLAAQPAMAHHHHHHSSGLVPRGSHMSDEVDGQVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVSS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS | N.A. | 13.645088 | 0 | 167 | 0 | 120 | 0 | 120 | 0 | 0 | anti kappa light chain vhh | N.A. | lama glama | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
8ghp_H_L | 8ghp | gucy2c-ecd bound to anti-gucy2c-scfv antibody | no | protein binding | 2023-03-10 | 2023-08-30 | x-ray diffraction | 3.52 | 0.282 | 0.274 | 37591971 | 10.1038/s41598-023-40467-0 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMHWVRQAPGKGLEWIGEIKPSNELTNVHEKFKDRFTISVDKAKNSAYLQMNSLRAEDTAVYYCTRTITTTEGYWFFDVWGQGTLVTVSS | DIQLTQSPSSLSASVGDRVTITCRASESVDYYGSSLLQWYQQKPGKAPKLLIYAASKLASGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQTRKAYTFGQGTKLEIKTGSENLYFQ | EVQLVESGGGLVQPGGSLRLSCAASGFTFSSYWMHWVRQAPGKGLEWIGEIKPSNELTNVHEKFKDRFTISVDKAKNSAYLQMNSLRAEDTAVYYCTRTITTTEGYWFFDVWGQGTLVTVS | DIQLTQSPSSLSASVGDRVTITCRASESVDYYGSSLLQWYQQKPGKAPKLLIYAASKLASGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQTRKAYTFGQGTKLEIKTGSENLYFQ | 14.15586 | 14.210175 | 122 | 119 | 121 | 119 | 121 | 119 | 43 | anti-gucy2c-scfv antibody heavy chain | anti-gucy2c-scfv antibody light chain | homo sapiens | homo sapiens | A | protein | guanylyl cyclase c | homo sapiens | 34 | 19 | 0.95 | HL | train |
8ghk_M_N | 8ghk | cryoem structure of influenza a virus a/melbourner/1/1946 (h1n1) hemagglutinin bound to gs10-x6-be4 fab | no | viral protein/immune system | 2023-03-10 | 2024-06-26 | electron microscopy | 3.47 | N.A. | N.A. | 38810648 | 10.1016/j.str.2024.05.001 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | M | N | MVLGLKWVFFVVLYQGVHCEVQLVESGGGLVQPKGSLKLSCATSGFTFNTFDMHWVRQAPGKDLEWVARIRTKGNSYATYYAASVKDRITISRDDSQSMLYLEMNSLRSEDTAMYYCVREGGHYYGYYFDFWGQGTTLTVSS | MSSAQFLGLLLLCFQGTRCEIQMTQTTSSLSASLGDRVTISCRASQDIYNYLNWYQQQPDGAVKLLIYYTSKLHSGVPSRFSGSGSGTDYSLTITNLEQEDIATYFCQQGYTLPYTFGGGTKLEIK | EVQLVESGGGLVQPKGSLKLSCATSGFTFNTFDMHWVRQAPGKDLEWVARIRTKGNSYATYYAASVKDRITISRDDSQSMLYLEMNSLRSEDTAMYYCVREGGHYYGYYFDFWGQGTTLTV | IQMTQTTSSLSASLGDRVTISCRASQDIYNYLNWYQQQPDGAVKLLIYYTSKLHSGVPSRFSGSGSGTDYSLTITNLEQEDIATYFCQQGYTLPYTFGGGTKL | 14.246669 | 13.374335 | 142 | 126 | 121 | 103 | 121 | 103 | 46 | gs10-x6-be4 fab heavy chain | gs10-x6-be4 fab light chain | homo sapiens | homo sapiens | B | protein | hemagglutinin | influenza a virus | 39 | 15 | 0.79 | HL | train |
8ghk_H_L | 8ghk | cryoem structure of influenza a virus a/melbourner/1/1946 (h1n1) hemagglutinin bound to gs10-x6-be4 fab | no | viral protein/immune system | 2023-03-10 | 2024-06-26 | electron microscopy | 3.47 | N.A. | N.A. | 38810648 | 10.1016/j.str.2024.05.001 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | MVLGLKWVFFVVLYQGVHCEVQLVESGGGLVQPKGSLKLSCATSGFTFNTFDMHWVRQAPGKDLEWVARIRTKGNSYATYYAASVKDRITISRDDSQSMLYLEMNSLRSEDTAMYYCVREGGHYYGYYFDFWGQGTTLTVSS | MSSAQFLGLLLLCFQGTRCEIQMTQTTSSLSASLGDRVTISCRASQDIYNYLNWYQQQPDGAVKLLIYYTSKLHSGVPSRFSGSGSGTDYSLTITNLEQEDIATYFCQQGYTLPYTFGGGTKLEIK | EVQLVESGGGLVQPKGSLKLSCATSGFTFNTFDMHWVRQAPGKDLEWVARIRTKGNSYATYYAASVKDRITISRDDSQSMLYLEMNSLRSEDTAMYYCVREGGHYYGYYFDFWGQGTTLTVS | IQMTQTTSSLSASLGDRVTISCRASQDIYNYLNWYQQQPDGAVKLLIYYTSKLHSGVPSRFSGSGSGTDYSLTITNLEQEDIATYFCQQGYTLPYTFGGGTKL | 14.36767 | 13.320434 | 142 | 126 | 122 | 103 | 122 | 103 | 42 | gs10-x6-be4 fab heavy chain | gs10-x6-be4 fab light chain | homo sapiens | homo sapiens | C | protein | hemagglutinin | influenza a virus | 32 | 10 | 0.83 | HL | train |
8ghv_S | 8ghv | cannabinoid receptor 1-g protein complex | no | membrane protein | 2023-03-12 | 2023-05-24 | electron microscopy | 2.8 | N.A. | N.A. | 37160876 | 10.1038/s41467-023-37864-4 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAHHHHHHHH | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.97878 | 0 | 259 | 0 | 232 | 0 | 246 | 0 | 0 | scfv16 | N.A. | mus musculus | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 29;21 | 18;9 | 1.0;0.82 | H_only | train |
8gje_H_L | 8gje | hiv-1 env subtype c cza97.12 sosip.664 in complex with 3bnc117 fab | yes | viral protein/immune system | 2023-03-15 | 2023-10-18 | electron microscopy | 3.4 | N.A. | N.A. | 37903160 | 10.1371/journal.ppat.1011601 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | H | L | QVQLLQSGAAVTKPGASVRVSCEASGYNIRDYFIHWWRQAPGQGLQWVGWINPKTGQPNNPRQFQGRVSLTRHASWDFDTYSFYMDLKALRSDDTAVYFCARQRSDYWDFDVWGSGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQMTQSPSSLSASVGDTVTITCQANGYLNWYQQRRGKAPKLLIYDGSKLERGVPSRFSGRRWGQEYNLTINNLQPEDIATYFCQVYEFVVPGTRLDLKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLLQSGAAVTKPGASVRVSCEASGYNIRDYFIHWWRQAPGQGLQWVGWINPKTGQPNNPRQFQGRVSLTRHASWDFDTYSFYMDLKALRSDDTAVYFCARQRSDYWDFDVWGSGTQVTV | DIQMTQSPSSLSASVGDTVTITCQANGYLNWYQQRRGKAPKLLIYDGSKLERGVPSRFSGRRWGQEYNLTINNLQPEDIATYFCQVYEFVVPGTRLDL | 14.138021 | 13.05775 | 226 | 206 | 121 | 98 | 121 | 98 | 40 | 3bnc117 fab heavy chain | 3bnc117 kappa light chain | homo sapiens | homo sapiens | A | protein | cza97.12 sosip.664 envelope glycoprotein gp120 | human immunodeficiency virus 1 | 63 | 13 | 0.5 | HL | train |
8gje_G_J | 8gje | hiv-1 env subtype c cza97.12 sosip.664 in complex with 3bnc117 fab | yes | viral protein/immune system | 2023-03-15 | 2023-10-18 | electron microscopy | 3.4 | N.A. | N.A. | 37903160 | 10.1371/journal.ppat.1011601 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | G | J | QVQLLQSGAAVTKPGASVRVSCEASGYNIRDYFIHWWRQAPGQGLQWVGWINPKTGQPNNPRQFQGRVSLTRHASWDFDTYSFYMDLKALRSDDTAVYFCARQRSDYWDFDVWGSGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQMTQSPSSLSASVGDTVTITCQANGYLNWYQQRRGKAPKLLIYDGSKLERGVPSRFSGRRWGQEYNLTINNLQPEDIATYFCQVYEFVVPGTRLDLKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLLQSGAAVTKPGASVRVSCEASGYNIRDYFIHWWRQAPGQGLQWVGWINPKTGQPNNPRQFQGRVSLTRHASWDFDTYSFYMDLKALRSDDTAVYFCARQRSDYWDFDVWGSGTQVTV | DIQMTQSPSSLSASVGDTVTITCQANGYLNWYQQRRGKAPKLLIYDGSKLERGVPSRFSGRRWGQEYNLTINNLQPEDIATYFCQVYEFVVPGTRLDL | 14.138015 | 13.057752 | 226 | 206 | 121 | 98 | 121 | 98 | 40 | 3bnc117 fab heavy chain | 3bnc117 kappa light chain | homo sapiens | homo sapiens | C | protein | cza97.12 sosip.664 envelope glycoprotein gp120 | human immunodeficiency virus 1 | 63 | 13 | 0.5 | HL | train |
8gje_I_K | 8gje | hiv-1 env subtype c cza97.12 sosip.664 in complex with 3bnc117 fab | yes | viral protein/immune system | 2023-03-15 | 2023-10-18 | electron microscopy | 3.4 | N.A. | N.A. | 37903160 | 10.1371/journal.ppat.1011601 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | I | K | QVQLLQSGAAVTKPGASVRVSCEASGYNIRDYFIHWWRQAPGQGLQWVGWINPKTGQPNNPRQFQGRVSLTRHASWDFDTYSFYMDLKALRSDDTAVYFCARQRSDYWDFDVWGSGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQMTQSPSSLSASVGDTVTITCQANGYLNWYQQRRGKAPKLLIYDGSKLERGVPSRFSGRRWGQEYNLTINNLQPEDIATYFCQVYEFVVPGTRLDLKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLLQSGAAVTKPGASVRVSCEASGYNIRDYFIHWWRQAPGQGLQWVGWINPKTGQPNNPRQFQGRVSLTRHASWDFDTYSFYMDLKALRSDDTAVYFCARQRSDYWDFDVWGSGTQVTV | DIQMTQSPSSLSASVGDTVTITCQANGYLNWYQQRRGKAPKLLIYDGSKLERGVPSRFSGRRWGQEYNLTINNLQPEDIATYFCQVYEFVVPGTRLDL | 14.138015 | 13.05775 | 226 | 206 | 121 | 98 | 121 | 98 | 40 | 3bnc117 fab heavy chain | 3bnc117 kappa light chain | homo sapiens | homo sapiens | D | protein | cza97.12 sosip.664 envelope glycoprotein gp120 | human immunodeficiency virus 1 | 63 | 13 | 0.5 | HL | train |
8iq6_N | 8iq6 | cryo-em structure of latanoprost-bound prostaglandin-f2-alpha receptor-minigq-nb35 complex | no | membrane protein | 2023-03-15 | 2024-01-31 | electron microscopy | 3.4 | N.A. | N.A. | 38065938 | 10.1038/s41467-023-43922-8 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTPFCFDVTSTTYAYRGQGTQVTVSSHHHHHH | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTPFCFDVTSTTYAYRGQGTQVTV | N.A. | 13.007679 | 0 | 134 | 0 | 114 | 0 | 126 | 0 | 0 | nanobody 35 | N.A. | vicugna pacos | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 38;32 | 11;11 | 0.58;0.73 | H_only | train |
8gjm_D_E | 8gjm | 17b10 fab in complex with full-length sars-cov-2 spike g614 trimer | no | viral protein | 2023-03-16 | 2023-04-05 | electron microscopy | 2.8 | N.A. | N.A. | 36916782 | 10.1002/jmv.28673 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | D | E | MGWSWIFLFLLSGTAGVLSEVQLQQSGPELVKPGASVRISCKTSGYTFTEYSMFWVKQSHGQSLEWIGGINPNDDSTTYKQNFKGKATLTVDKSSSTAFMELRSLTSEDSAVYYCTRDRYDGRVVDFWGQGTTLTVSS | MRVPAHVFGFLLLWFPGTRCDIQMTQSPSSLSASLGERVSLICRASQEISGYLSWLQQKPDGTIKRLIYAASTLDSGVPKRFSGSRSGSEYSLTISSPESEDFADYYCLQYASYPWTFGGGTKLEIK | EVQLQQSGPELVKPGASVRISCKTSGYTFTEYSMFWVKQSHGQSLEWIGGINPNDDSTTYKQNFKGKATLTVDKSSSTAFMELRSLTSEDSAVYYCTRDRYDGRVVDFWGQGTTLTVSS | IQMTQSPSSLSASLGERVSLICRASQEISGYLSWLQQKPDGTIKRLIYAASTLDSGVPKRFSGSRSGSEYSLTISSPESEDFADYYCLQYASYPWTFGGGTKLEIK | 14.01769 | 13.300805 | 138 | 127 | 119 | 106 | 119 | 106 | 38 | heavy chain of 17b10 fab | light chain of 17b10 fab | mus musculus | mus musculus | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 35 | 17 | 0.81 | HL | train |
8gjn_A_B | 8gjn | 17b10 fab in complex with up-rbd of sars-cov-2 spike g614 trimer | no | viral protein | 2023-03-16 | 2023-04-05 | electron microscopy | 3.6 | N.A. | N.A. | 36916782 | 10.1002/jmv.28673 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | A | B | MGWSWIFLFLLSGTAGVLSEVQLQQSGPELVKPGASVRISCKTSGYTFTEYSMFWVKQSHGQSLEWIGGINPNDDSTTYKQNFKGKATLTVDKSSSTAFMELRSLTSEDSAVYYCTRDRYDGRVVDFWGQGTTLTVSS | MRVPAHVFGFLLLWFPGTRCDIQMTQSPSSLSASLGERVSLICRASQEISGYLSWLQQKPDGTIKRLIYAASTLDSGVPKRFSGSRSGSEYSLTISSPESEDFADYYCLQYASYPWTFGGGTKLEIK | EVQLQQSGPELVKPGASVRISCKTSGYTFTEYSMFWVKQSHGQSLEWIGGINPNDDSTTYKQNFKGKATLTVDKSSSTAFMELRSLTSEDSAVYYCTRDRYDGRVVDFWGQGTTLTVSS | IQMTQSPSSLSASLGERVSLICRASQEISGYLSWLQQKPDGTIKRLIYAASTLDSGVPKRFSGSRSGSEYSLTISSPESEDFADYYCLQYASYPWTFGGGTKLEIK | 14.029953 | 13.352749 | 138 | 127 | 119 | 106 | 119 | 106 | 44 | heavy chain of 17b10 fab | light chain of 17b10 fab | mus musculus | mus musculus | C | protein | spike protein s2' | severe acute respiratory syndrome coronavirus 2 | 36 | 17 | 0.81 | HL | train |
8iqp_H_L | 8iqp | crystal structure of anti-peg antibody m9 fv-clasp fragment with peg (co-crystallization with peg3350) | no | immune system | 2023-03-17 | 2024-03-20 | x-ray diffraction | 1.76 | 0.246 | 0.205 | 39921032 | 10.1016/j.jconrel.2025.02.001 | 0 | auth_asym_id | VH+:VL+ | IGHV3 | IGKV2 | H | L | MSKIKGHHHHHHGGMEVQLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTPEKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYCASAYDGSYYFDYWGQGTTVTVCSGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQSKRQPILDAIEAK | MSKIKGHHHHHHGGMDVLMTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPWTFGGGTKLEIKRGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQCKRQPILDAIEAK | MEVQLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTPEKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYCASAYDGSYYFDYWGQGTTVTVCSGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQSKRQPILDAIEAK | MDVLMTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPWTFGGGTKLEIKRGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQCKRQPILDAIEAK | 20.980143 | 20.086384 | 185 | 179 | 171 | 165 | 171 | 165 | 109 | m9 vh-sarah | m9 vl-sarah | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8iqp_h_l | 8iqp | crystal structure of anti-peg antibody m9 fv-clasp fragment with peg (co-crystallization with peg3350) | no | immune system | 2023-03-17 | 2024-03-20 | x-ray diffraction | 1.76 | 0.246 | 0.205 | 39921032 | 10.1016/j.jconrel.2025.02.001 | 0 | auth_asym_id | VH+:VL+ | IGHV3 | IGKV2 | h | l | MSKIKGHHHHHHGGMEVQLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTPEKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYCASAYDGSYYFDYWGQGTTVTVCSGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQSKRQPILDAIEAK | MSKIKGHHHHHHGGMDVLMTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPWTFGGGTKLEIKRGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQCKRQPILDAIEAK | MEVQLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTPEKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYCASAYDGSYYFDYWGQGTTVTVCSGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQSKRQPILDAIEAK | MDVLMTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPWTFGGGTKLEIKRGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQCKRQPILDAIE | 21.171347 | 19.746408 | 185 | 179 | 171 | 163 | 171 | 163 | 106 | m9 vh-sarah | m9 vl-sarah | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8iqq_H_L | 8iqq | crystal structure of anti-peg antibody m9 fv-clasp fragment with peg (co-crystallization with peg2000mme) | no | immune system | 2023-03-17 | 2024-03-20 | x-ray diffraction | 2.02 | 0.243 | 0.199 | 39921032 | 10.1016/j.jconrel.2025.02.001 | 0 | auth_asym_id | VH+:VL+ | IGHV3 | IGKV2 | H | L | MSKIKGHHHHHHGGMEVQLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTPEKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYCASAYDGSYYFDYWGQGTTVTVCSGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQSKRQPILDAIEAK | MSKIKGHHHHHHGGMDVLMTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPWTFGGGTKLEIKRGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQCKRQPILDAIEAK | MEVQLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTPEKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYCASAYDGSYYFDYWGQGTTVTVCSGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQSKRQPILDAIEAK | MDVLMTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPWTFGGGTKLEIKRGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQCKRQPILDAIEAK | 21.045662 | 20.27292 | 185 | 179 | 171 | 165 | 171 | 165 | 107 | m9 vh-sarah | m9 vl-sarah | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8iqq_h_l | 8iqq | crystal structure of anti-peg antibody m9 fv-clasp fragment with peg (co-crystallization with peg2000mme) | no | immune system | 2023-03-17 | 2024-03-20 | x-ray diffraction | 2.02 | 0.243 | 0.199 | 39921032 | 10.1016/j.jconrel.2025.02.001 | 0 | auth_asym_id | VH+:VL+ | IGHV3 | IGKV2 | h | l | MSKIKGHHHHHHGGMEVQLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTPEKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYCASAYDGSYYFDYWGQGTTVTVCSGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQSKRQPILDAIEAK | MSKIKGHHHHHHGGMDVLMTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPWTFGGGTKLEIKRGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQCKRQPILDAIEAK | MEVQLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTPEKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYCASAYDGSYYFDYWGQGTTVTVCSGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQSKRQPILDAIEAK | MDVLMTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPWTFGGGTKLEIKRGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQCKRQPILDAIEAK | 21.08275 | 20.196419 | 185 | 179 | 171 | 165 | 171 | 165 | 108 | m9 vh-sarah | m9 vl-sarah | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8iqr_H_L | 8iqr | crystal structure of anti-peg antibody m9 fv-clasp fragment with peg (co-crystallization with peg550dme) | no | immune system | 2023-03-17 | 2024-03-20 | x-ray diffraction | 2.35 | 0.292 | 0.235 | 39921032 | 10.1016/j.jconrel.2025.02.001 | 0 | auth_asym_id | VH+:VL+ | IGHV3 | IGKV2 | H | L | MSKIKGHHHHHHGGMEVQLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTPEKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYCASAYDGSYYFDYWGQGTTVTVCSGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQSKRQPILDAIEAK | MSKIKGHHHHHHGGMDVLMTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPWTFGGGTKLEIKRGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQCKRQPILDAIEAK | EVQLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTPEKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYCASAYDGSYYFDYWGQGTTVTVCSGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQSKRQPILDAIEAK | MDVLMTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPWTFGGGTKLEIKRGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQCKRQPILDAIEAK | 21.143612 | 20.307722 | 185 | 179 | 167 | 165 | 170 | 165 | 115 | m9 vh-sarah | m9 vl-sarah | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8iqr_h_l | 8iqr | crystal structure of anti-peg antibody m9 fv-clasp fragment with peg (co-crystallization with peg550dme) | no | immune system | 2023-03-17 | 2024-03-20 | x-ray diffraction | 2.35 | 0.292 | 0.235 | 39921032 | 10.1016/j.jconrel.2025.02.001 | 0 | auth_asym_id | VH+:VL+ | IGHV3 | IGKV2 | h | l | MSKIKGHHHHHHGGMEVQLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTPEKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYCASAYDGSYYFDYWGQGTTVTVCSGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQSKRQPILDAIEAK | MSKIKGHHHHHHGGMDVLMTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPWTFGGGTKLEIKRGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQCKRQPILDAIEAK | MEVQLVESGGGLVKPGGSLKLSCAASGFTFSSYAMSWVRQTPEKRLEWVATISSGGSYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAMYYCASAYDGSYYFDYWGQGTTVTVCSGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQSKRQPILDAIEAK | MDVLMTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPWTFGGGTKLEIKRGSDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQCKRQPILDAIEA | 20.999142 | 19.936445 | 185 | 179 | 165 | 164 | 171 | 164 | 106 | m9 vh-sarah | m9 vl-sarah | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8irt_E | 8irt | dopamine receptor d3r-gi-rotigotine complex | yes | membrane protein | 2023-03-19 | 2023-06-07 | electron microscopy | 2.7 | N.A. | N.A. | 37221270 | 10.1038/s41422-023-00808-0 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.082743 | 0 | 248 | 0 | 232 | 0 | 246 | 0 | 0 | scfv16 | N.A. | mus musculus | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 38;25 | 23;10 | 0.92;0.77 | H_only | train |
8irr_N | 8irr | dopamine receptor d1r-gs-rotigotine complex | no | membrane protein | 2023-03-19 | 2023-06-21 | electron microscopy | 3.2 | N.A. | N.A. | 37221270 | 10.1038/s41422-023-00808-0 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHH | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 13.759933 | 0 | 135 | 0 | 128 | 0 | 128 | 0 | 0 | nanoboy 35 | N.A. | lama glama | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 52;30 | 17;11 | 0.63;0.79 | H_only | train |
8iru_E | 8iru | dopamine receptor d4r-gi-rotigotine complex | no | membrane protein | 2023-03-19 | 2023-06-21 | electron microscopy | 3.2 | N.A. | N.A. | 37221270 | 10.1038/s41422-023-00808-0 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.24349 | 0 | 248 | 0 | 231 | 0 | 246 | 0 | 0 | scfv16 | N.A. | mus musculus | N.A. | B;A | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(i) subunit alpha-1 | homo sapiens;homo sapiens | 24;33 | 9;23 | 0.82;0.96 | H_only | train |
8gkj_A_B | 8gkj | crystal structure of the murine muc16 specific antibody ar9.6 | no | immune system | 2023-03-19 | 2024-03-20 | x-ray diffraction | 1.9 | 0.219 | 0.182 | 38394685 | 10.1158/1535-7163.MCT-23-0868 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV7 | A | B | EVQLVESGGGLVQPGGSRKLSCAASGFTFSTFGMHWVRQAPEKGLEWVAYISSGSSTIYYGDTLQGRFIISRDNPKNTLFLQMTSLRSEDTAMYYCARSGYDYDPIYYALDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGSHHHHHH | DIVLTQSPASLAVSLGQRATISCRASESVDNYGISFMNWFQQKPGHPPKLLIYGASNQGSGVPARFSGSGSGTDFSLNIHPMEEDDAAMYFCQQTKEVPWTFGGGTKVEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | VQLVESGGGLVQPGGSRKLSCAASGFTFSTFGMHWVRQAPEKGLEWVAYISSGSSTIYYGDTLQGRFIISRDNPKNTLFLQMTSLRSEDTAMYYCARSGYDYDPIYYALDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRD | DIVLTQSPASLAVSLGQRATISCRASESVDNYGISFMNWFQQKPGHPPKLLIYGASNQGSGVPARFSGSGSGTDFSLNIHPMEEDDAAMYFCQQTKEVPWTFGGGTKVEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | 22.179224 | 23.412148 | 233 | 218 | 223 | 218 | 223 | 218 | 117 | muc16 antibody ar9.6 heavy chain | muc16 antibody ar9.6 light chain | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8gkj_C_D | 8gkj | crystal structure of the murine muc16 specific antibody ar9.6 | no | immune system | 2023-03-19 | 2024-03-20 | x-ray diffraction | 1.9 | 0.219 | 0.182 | 38394685 | 10.1158/1535-7163.MCT-23-0868 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV7 | C | D | EVQLVESGGGLVQPGGSRKLSCAASGFTFSTFGMHWVRQAPEKGLEWVAYISSGSSTIYYGDTLQGRFIISRDNPKNTLFLQMTSLRSEDTAMYYCARSGYDYDPIYYALDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGSHHHHHH | DIVLTQSPASLAVSLGQRATISCRASESVDNYGISFMNWFQQKPGHPPKLLIYGASNQGSGVPARFSGSGSGTDFSLNIHPMEEDDAAMYFCQQTKEVPWTFGGGTKVEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EVQLVESGGGLVQPGGSRKLSCAASGFTFSTFGMHWVRQAPEKGLEWVAYISSGSSTIYYGDTLQGRFIISRDNPKNTLFLQMTSLRSEDTAMYYCARSGYDYDPIYYALDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVP | DIVLTQSPASLAVSLGQRATISCRASESVDNYGISFMNWFQQKPGHPPKLLIYGASNQGSGVPARFSGSGSGTDFSLNIHPMEEDDAAMYFCQQTKEVPWTFGGGTKVEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE | 21.598042 | 23.366447 | 233 | 218 | 218 | 217 | 222 | 217 | 100 | muc16 antibody ar9.6 heavy chain | muc16 antibody ar9.6 light chain | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8gkk_H_L | 8gkk | crystal structure of the humanized muc16 specific antibody huar9.6 | no | immune system | 2023-03-19 | 2024-03-20 | x-ray diffraction | 1.75 | 0.192 | 0.167 | 38394685 | 10.1158/1535-7163.MCT-23-0868 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | H | L | EVQLVESGGGLVQPGGSLRLSCAASGFTFSTFGMHWVRQAPGKGLEWVAYISSGSSTIYYGDTLQGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARSGYDYDPIYYALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPASC | EIVLTQSPATLSVSPGERATLSCRASESVDNYGISFMNWYQQKPGQAPRLLIYGASNQGSGIPARFSGSGSGTDFTLTISSLEPEDAAVYYCQQTKEVPWTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFTFSTFGMHWVRQAPGKGLEWVAYISSGSSTIYYGDTLQGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARSGYDYDPIYYALDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPA | EIVLTQSPATLSVSPGERATLSCRASESVDNYGISFMNWYQQKPGQAPRLLIYGASNQGSGIPARFSGSGSGTDFTLTISSLEPEDAAVYYCQQTKEVPWTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 20.96145 | 23.344421 | 226 | 218 | 219 | 215 | 224 | 215 | 102 | muc16 antibody ar9.6 heavy chain | muc16 antibody ar9.6 light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8gkl_H_L | 8gkl | crystal structure of the humanized muc16 specific antibody huar9.6 | no | immune system | 2023-03-19 | 2024-03-20 | x-ray diffraction | 2.6 | 0.269 | 0.215 | 38394685 | 10.1158/1535-7163.MCT-23-0868 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV7 | H | L | EVQLVESGGGLVQPGGSRKLSCAASGFTFSTFGMHWVRQAPEKGLEWVAYISSGSSTIYYGDTLQGRFIISRDNPKNTLFLQMTSLRSEDTAMYYCARSGYDYDPIYYALDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGSHHHHHH | DIVLTQSPASLAVSLGQRATISCRASESVDNYGISFMNWFQQKPGHPPKLLIYGASNQGSGVPARFSGSGSGTDFSLNIHPMEEDDAAMYFCQQTKEVPWTFGGGTKVEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | VQLVESGGGLVQPGGSRKLSCAASGFTFSTFGMHWVRQAPEKGLEWVAYISSGSSTIYYGDTLQGRFIISRDNPKNTLFLQMTSLRSEDTAMYYCARSGYDYDPIYYALDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR | DIVLTQSPASLAVSLGQRATISCRASESVDNYGISFMNWFQQKPGHPPKLLIYGASNQGSGVPARFSGSGSGTDFSLNIHPMEEDDAAMYFCQQTKEVPWTFGGGTKVEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN | 20.631172 | 23.430357 | 233 | 218 | 213 | 214 | 222 | 216 | 100 | muc16 antibody ar9.6 fab heavy chain | muc16 antibody ar9.6 fab light chain | mus musculus | mus musculus | E | protein | mucin-16 | homo sapiens | 43 | 20 | 0.83 | HL | train |
8itf_N | 8itf | cryo-em structure of the dmcha-bound mtaar9-gs complex | no | membrane protein | 2023-03-22 | 2023-05-31 | electron microscopy | 3.46 | N.A. | N.A. | 37225986 | 10.1038/s41586-023-06106-4 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVS | N.A. | 14.025835 | 0 | 128 | 0 | 127 | 0 | 127 | 0 | 0 | nanobody-35 | N.A. | synthetic construct | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 36;29 | 12;11 | 0.63;0.73 | H_only | train |
8itf_S | 8itf | cryo-em structure of the dmcha-bound mtaar9-gs complex | no | membrane protein | 2023-03-22 | 2023-05-31 | electron microscopy | 3.46 | N.A. | N.A. | 37225986 | 10.1038/s41586-023-06106-4 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFAVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKL | N.A. | 17.798584 | 0 | 285 | 0 | 228 | 0 | 245 | 0 | 0 | scfv16 | N.A. | synthetic construct | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 27;19 | 17;9 | 1.0;0.82 | H_only | train |
8itl_N | 8itl | cryo-em structure of gipr splice variant 1 (sv1) in complex with gs protein | yes | structural protein | 2023-03-22 | 2023-10-18 | electron microscopy | 3.23 | N.A. | N.A. | 37792509 | 10.1073/pnas.2306145120 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVS | N.A. | 13.759949 | 0 | 128 | 0 | 127 | 0 | 127 | 0 | 0 | nanobody-35 | N.A. | synthetic construct | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | bos taurus;rattus norvegicus | 50;32 | 15;11 | 0.56;0.65 | H_only | train |
8itm_N | 8itm | cryo-em structure of gipr splice variant 2 (sv2) in complex with gs protein | yes | structural protein | 2023-03-22 | 2023-10-18 | electron microscopy | 3.13 | N.A. | N.A. | 37792509 | 10.1073/pnas.2306145120 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVS | N.A. | 13.796535 | 0 | 128 | 0 | 127 | 0 | 127 | 0 | 0 | nanobody-35 | N.A. | synthetic construct | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | bos taurus;rattus norvegicus | 50;34 | 13;12 | 0.52;0.67 | H_only | train |
8oi2_B | 8oi2 | crystal structure of alb1 megabody in complex with human serum albumin | no | immune system | 2023-03-22 | 2024-04-03 | x-ray diffraction | 3.3 | 0.277 | 0.226 | 38152025 | 10.1002/pro.4887 | 0 | auth_asym_id | VH+ | IGHV3 | N.A. | B | N.A. | QVQLVESGGGLVQTKTTTSVIDTTNDAQNLLTQAQTIVNTLKDYCPILIAKSSSSNGGTNNANTPSWQTAGGGKNSCATFGAEFSAASDMINNAQKIVQETQQLSANQPKNITQPHNLNLNSPSSLTALAQKMLKNAQSQAEILKLANQVESDFNKLSSGHLKDYIGKCDASAISSANMTMQNQKNNWGNGCAGVEETQSLLKTSAADFNNQTPQINQAQNLANTLIQELGNNTYEQLSRLLTNDNGTNSKTSAQAINQAVNNLNERAKTLAGGTTNSPAYQATLLALRSVLGLWNSMGYAVICGGYTKSPGENNQKDFH... | N.A. | QVQLVESGGGLVQTKTTTSVIDTTNDAQNLLTQAQTIVNTLKDYCPILIAKSSSSNGGTNNANTPSWQTAGGGKNSCATFGAEFSAASDMINNAQKIVQETQQLSANQPKNITQPHNLNLNSPSSLTALAQKMLKNAQSQAEILKLANQVESDFNKLSSGHLKDYIGKCDASAISSANMTMQNQKNNWGNGCAGVEETQSLLKTSAADFNNQTPQINQAQNLANTLIQELGNNTYEQLSRLLTNDNGTNSKTSAQAINQAVNNLNERAKTLAGGTTNSPAYQATLLALRSVLGLWNSMGYAVICGGYTKSPGENNQKDFH... | N.A. | 31.157387 | 0 | 512 | 0 | 466 | 0 | 507 | 0 | 0 | alb1 megabody | N.A. | helicobacter pylori g27 | N.A. | A | protein | albumin | homo sapiens | 38 | 15 | 0.65 | H_only | train |
8itu_E_D | 8itu | sars-cov-2 omicron ba.1 spike glycoprotein in complex with rabbit monoclonal antibody 1h1 igg. | yes | viral protein/immune system | 2023-03-23 | 2023-04-12 | electron microscopy | 3.68 | N.A. | N.A. | 37012333 | 10.1038/s42003-023-04759-5 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | E | D | QSLEESGGDLVKPGASLTLTCTASGFSFSSGYDMCWVRQAPGKGLEWIACIGTGSSGNIYYASWAKGRFTISKTSSTTVTLQMTSLTAADTATYFCARDDADYAGPDYFNLWGPGTLVTVSS | DIVMTQTPASVSEPVGGTVTIKCQASESISNWLAWYQQKPGQPPKLLIYAAFTLASGVPSRFKGSGSGTQFTLTINGVECADAATYYCQQTYSSRDVDNVFGGGTEVVVKG | QSLEESGGDLVKPGASLTLTCTASGFSFSSGYDMCWVRQAPGKGLEWIACIGTGSSGNIYYASWAKGRFTISKTSSTTVTLQMTSLTAADTATYFCARDDADYAGPDYFNLWGPGTLVTVSS | DIVMTQTPASVSEPVGGTVTIKCQASESISNWLAWYQQKPGQPPKLLIYAAFTLASGVPSRFKGSGSGTQFTLTINGVECADAATYYCQQTYSSRDVDNVFGGGTEVVVKG | 13.535725 | 13.547834 | 122 | 111 | 122 | 111 | 122 | 111 | 48 | 1h1 heavy chain | 1h1 light chain | oryctolagus cuniculus | oryctolagus cuniculus | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 45 | 14 | 0.61 | HL | train |
8itu_G_F | 8itu | sars-cov-2 omicron ba.1 spike glycoprotein in complex with rabbit monoclonal antibody 1h1 igg. | yes | viral protein/immune system | 2023-03-23 | 2023-04-12 | electron microscopy | 3.68 | N.A. | N.A. | 37012333 | 10.1038/s42003-023-04759-5 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | G | F | QSLEESGGDLVKPGASLTLTCTASGFSFSSGYDMCWVRQAPGKGLEWIACIGTGSSGNIYYASWAKGRFTISKTSSTTVTLQMTSLTAADTATYFCARDDADYAGPDYFNLWGPGTLVTVSS | DIVMTQTPASVSEPVGGTVTIKCQASESISNWLAWYQQKPGQPPKLLIYAAFTLASGVPSRFKGSGSGTQFTLTINGVECADAATYYCQQTYSSRDVDNVFGGGTEVVVKG | QSLEESGGDLVKPGASLTLTCTASGFSFSSGYDMCWVRQAPGKGLEWIACIGTGSSGNIYYASWAKGRFTISKTSSTTVTLQMTSLTAADTATYFCARDDADYAGPDYFNLWGPGTLVTVSS | DIVMTQTPASVSEPVGGTVTIKCQASESISNWLAWYQQKPGQPPKLLIYAAFTLASGVPSRFKGSGSGTQFTLTINGVECADAATYYCQQTYSSRDVDNVFGGGTEVVVKG | 13.601182 | 13.463576 | 122 | 111 | 122 | 111 | 122 | 111 | 49 | 1h1 heavy chain | 1h1 light chain | oryctolagus cuniculus | oryctolagus cuniculus | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 49 | 15 | 0.62 | HL | train |
8itu_I_H | 8itu | sars-cov-2 omicron ba.1 spike glycoprotein in complex with rabbit monoclonal antibody 1h1 igg. | yes | viral protein/immune system | 2023-03-23 | 2023-04-12 | electron microscopy | 3.68 | N.A. | N.A. | 37012333 | 10.1038/s42003-023-04759-5 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | I | H | QSLEESGGDLVKPGASLTLTCTASGFSFSSGYDMCWVRQAPGKGLEWIACIGTGSSGNIYYASWAKGRFTISKTSSTTVTLQMTSLTAADTATYFCARDDADYAGPDYFNLWGPGTLVTVSS | DIVMTQTPASVSEPVGGTVTIKCQASESISNWLAWYQQKPGQPPKLLIYAAFTLASGVPSRFKGSGSGTQFTLTINGVECADAATYYCQQTYSSRDVDNVFGGGTEVVVKG | QSLEESGGDLVKPGASLTLTCTASGFSFSSGYDMCWVRQAPGKGLEWIACIGTGSSGNIYYASWAKGRFTISKTSSTTVTLQMTSLTAADTATYFCARDDADYAGPDYFNLWGPGTLVTVSS | DIVMTQTPASVSEPVGGTVTIKCQASESISNWLAWYQQKPGQPPKLLIYAAFTLASGVPSRFKGSGSGTQFTLTINGVECADAATYYCQQTYSSRDVDNVFGGGTEVVVKG | 13.597541 | 13.459914 | 122 | 111 | 122 | 111 | 122 | 111 | 47 | 1h1 heavy chain | 1h1 light chain | oryctolagus cuniculus | oryctolagus cuniculus | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 49 | 17 | 0.68 | HL | train |
8ojs_B_A | 8ojs | crystal structure of the human igd fab - structure fab1 | no | immune system | 2023-03-24 | 2023-06-14 | x-ray diffraction | 2.75 | 0.256 | 0.216 | 37267832 | 10.1016/j.molimm.2023.05.006 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGLV1 | B | A | QVQLVQSGAEVRNPGASVKVSCKASGYTFTSYAIHWVRQAPGHRLEWVGRINTDNGNTKYSQKFHGRVALSRDTSASTTYMDLSSLNSEDTAVYYCARAFYYSSGVMFDSWGQGALVTVSSAPTKAPDVFPIISGCRHPKDNSPVVLACLITGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWRQGEYKCVVQHTASKSKKEIFRWPESPKA | QSALTQPPSVSGAPGQRVSISCTGGSSNFGAGYDVHWYQQLPATAPKLLIYGNNNRPSGVPDRFSGSKSGTSASLAITGLQAEDEGDYFCQSFDTSLSGWIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | VQLVQSGAEVRNPGASVKVSCKASGYTFTSYAIHWVRQAPGHRLEWVGRINTDNGNTKYSQKFHGRVALSRDTSASTTYMDLSSLNSEDTAVYYCARAFYYSSGVMFDSWGQGALVTVSSAPTKAPDVFPIISGCRHPKDNSPVVLACLITGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWRQGEYKCVVQHTASKSKKEIFRWPESP | SALTQPPSVSGAPGQRVSISCTGGSSNFGAGYDVHWYQQLPATAPKLLIYGNNNRPSGVPDRFSGSKSGTSASLAITGLQAEDEGDYFCQSFDTSLSGWIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC | 25.181831 | 20.656366 | 227 | 217 | 222 | 215 | 224 | 215 | 108 | human igd fab heavy chain | human igd fab light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8ojs_H_L | 8ojs | crystal structure of the human igd fab - structure fab1 | no | immune system | 2023-03-24 | 2023-06-14 | x-ray diffraction | 2.75 | 0.256 | 0.216 | 37267832 | 10.1016/j.molimm.2023.05.006 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGLV1 | H | L | QVQLVQSGAEVRNPGASVKVSCKASGYTFTSYAIHWVRQAPGHRLEWVGRINTDNGNTKYSQKFHGRVALSRDTSASTTYMDLSSLNSEDTAVYYCARAFYYSSGVMFDSWGQGALVTVSSAPTKAPDVFPIISGCRHPKDNSPVVLACLITGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWRQGEYKCVVQHTASKSKKEIFRWPESPKA | QSALTQPPSVSGAPGQRVSISCTGGSSNFGAGYDVHWYQQLPATAPKLLIYGNNNRPSGVPDRFSGSKSGTSASLAITGLQAEDEGDYFCQSFDTSLSGWIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | VQLVQSGAEVRNPGASVKVSCKASGYTFTSYAIHWVRQAPGHRLEWVGRINTDNGNTKYSQKFHGRVALSRDTSASTTYMDLSSLNSEDTAVYYCARAFYYSSGVMFDSWGQGALVTVSSAPTKAPDVFPIISGCRHPKDNSPVVLACLITGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWRQGEYKCVVQHTASKSKKEIFRWPESP | SALTQPPSVSGAPGQRVSISCTGGSSNFGAGYDVHWYQQLPATAPKLLIYGNNNRPSGVPDRFSGSKSGTSASLAITGLQAEDEGDYFCQSFDTSLSGWIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC | 23.111374 | 24.314005 | 227 | 217 | 222 | 215 | 224 | 215 | 109 | human igd fab heavy chain | human igd fab light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8ojt_H_L | 8ojt | crystal structure of the human igd fab - structure fab2 | no | immune system | 2023-03-24 | 2023-06-14 | x-ray diffraction | 1.55 | 0.198 | 0.161 | 37267832 | 10.1016/j.molimm.2023.05.006 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGLV1 | H | L | QVQLVQSGAEVRNPGASVKVSCKASGYTFTSYAIHWVRQAPGHRLEWVGRINTDNGNTKYSQKFHGRVALSRDTSASTTYMDLSSLNSEDTAVYYCARAFYYSSGVMFDSWGQGALVTVSSAPTKAPDVFPIISGCRHPKDNSPVVLACLITGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWRQGEYKCVVQHTASKSKKEIFRWPESPKA | QSALTQPPSVSGAPGQRVSISCTGGSSNFGAGYDVHWYQQLPATAPKLLIYGNNNRPSGVPDRFSGSKSGTSASLAITGLQAEDEGDYFCQSFDTSLSGWIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | VQLVQSGAEVRNPGASVKVSCKASGYTFTSYAIHWVRQAPGHRLEWVGRINTDNGNTKYSQKFHGRVALSRDTSASTTYMDLSSLNSEDTAVYYCARAFYYSSGVMFDSWGQGALVTVSSAPTKAPDVFPIISGCRHPKDNSPVVLACLITGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWRQGEYKCVVQHTASKSKKEIFRWPESP | SALTQPPSVSGAPGQRVSISCTGGSSNFGAGYDVHWYQQLPATAPKLLIYGNNNRPSGVPDRFSGSKSGTSASLAITGLQAEDEGDYFCQSFDTSLSGWIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | 21.954998 | 23.997763 | 227 | 217 | 224 | 216 | 224 | 216 | 112 | human igd fab heavy chain | human igd fab light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8oju_H_L | 8oju | crystal structure of the human igd fab - structure fab3 | no | immune system | 2023-03-24 | 2023-06-14 | x-ray diffraction | 1.45 | 0.189 | 0.157 | 37267832 | 10.1016/j.molimm.2023.05.006 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGLV1 | H | L | QVQLVQSGAEVRNPGASVKVSCKASGYTFTSYAIHWVRQAPGHRLEWVGRINTDNGNTKYSQKFHGRVALSRDTSASTTYMDLSSLNSEDTAVYYCARAFYYSSGVMFDSWGQGALVTVSSAPTKAPDVFPIISGCRHPKDNSPVVLACLITGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWRQGEYKCVVQHTASKSKKEIFRWPESPKA | QSALTQPPSVSGAPGQRVSISCTGGSSNFGAGYDVHWYQQLPATAPKLLIYGNNNRPSGVPDRFSGSKSGTSASLAITGLQAEDEGDYFCQSFDTSLSGWIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | VQLVQSGAEVRNPGASVKVSCKASGYTFTSYAIHWVRQAPGHRLEWVGRINTDNGNTKYSQKFHGRVALSRDTSASTTYMDLSSLNSEDTAVYYCARAFYYSSGVMFDSWGQGALVTVSSAPTKAPDVFPIISGCRHPKDNSPVVLACLITGYHPTSVTVTWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWRQGEYKCVVQHTASKSKKEIFRWPESP | SALTQPPSVSGAPGQRVSISCTGGSSNFGAGYDVHWYQQLPATAPKLLIYGNNNRPSGVPDRFSGSKSGTSASLAITGLQAEDEGDYFCQSFDTSLSGWIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | 21.85126 | 24.216805 | 227 | 217 | 222 | 216 | 224 | 216 | 109 | human igd fab heavy chain | human igd fab light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
8iuk_E | 8iuk | cryo-em structure of the pgf2-alpha-bound human ptgfr-gq complex | no | membrane protein | 2023-03-24 | 2023-07-12 | electron microscopy | 2.67 | N.A. | N.A. | 37160891 | 10.1038/s41467-023-38411-x | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.563982 | 0 | 247 | 0 | 230 | 0 | 247 | 0 | 0 | antibody fragment scfv16 | N.A. | mus musculus | N.A. | A;B | protein;protein | g subunit alpha (q);guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 30;24 | 19;8 | 1.0;0.73 | H_only | train |
8iuk_N | 8iuk | cryo-em structure of the pgf2-alpha-bound human ptgfr-gq complex | no | membrane protein | 2023-03-24 | 2023-07-12 | electron microscopy | 2.67 | N.A. | N.A. | 37160891 | 10.1038/s41467-023-38411-x | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MKYLLPTAAAGLLLLAAQPAMAQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 14.022107 | 0 | 150 | 0 | 128 | 0 | 128 | 0 | 0 | nanobody nb35 | N.A. | lama glama | N.A. | A;B | protein;protein | g subunit alpha (q);guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 42;32 | 13;9 | 0.62;0.64 | H_only | train |
8iul_E | 8iul | cryo-em structure of the latanoprost-bound human ptgfr-gq complex | no | membrane protein | 2023-03-24 | 2023-07-12 | electron microscopy | 2.78 | N.A. | N.A. | 37160891 | 10.1038/s41467-023-38411-x | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.382202 | 0 | 247 | 0 | 230 | 0 | 247 | 0 | 0 | antibody fragment scfv16 | N.A. | mus musculus | N.A. | A;B | protein;protein | g subunit alpha (q);guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 32;27 | 20;11 | 0.95;0.79 | H_only | train |
8ium_E | 8ium | cryo-em structure of the tafluprost acid-bound human ptgfr-gq complex | no | membrane protein | 2023-03-24 | 2023-07-12 | electron microscopy | 3.14 | N.A. | N.A. | 37160891 | 10.1038/s41467-023-38411-x | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.493969 | 0 | 247 | 0 | 230 | 0 | 247 | 0 | 0 | antibody fragment scfv16 | N.A. | mus musculus | N.A. | A;B | protein;protein | g subunit alpha (q);guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 31;24 | 19;8 | 0.95;0.73 | H_only | train |
8ium_N | 8ium | cryo-em structure of the tafluprost acid-bound human ptgfr-gq complex | no | membrane protein | 2023-03-24 | 2023-07-12 | electron microscopy | 3.14 | N.A. | N.A. | 37160891 | 10.1038/s41467-023-38411-x | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MKYLLPTAAAGLLLLAAQPAMAQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 14.021006 | 0 | 150 | 0 | 128 | 0 | 128 | 0 | 0 | nanobody nb35 | N.A. | lama glama | N.A. | A;B | protein;protein | g subunit alpha (q);guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 51;31 | 16;11 | 0.62;0.73 | H_only | train |
8iuy_B_C | 8iuy | h7n9 ha-1h9 fab | no | membrane protein/immune system | 2023-03-25 | 2024-04-24 | electron microscopy | 2.9 | N.A. | N.A. | 39704525 | 10.1128/jvi.01400-24 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | B | C | MVQLQESGPGLVKPSQSLSLTCTVTGYSITSDYTWNWIRQFPGNKLEWMGYITYSDTTSYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYCARSDGWYGFAYWGQGTLVTVSA | DIQMNQSPSSLSASLGDTITITCHASQNINVWLSWYQQKPGNIPKLLIYKAFDLHTGVPSRFSGSGSGTGFTLTISSLQPEDIATYYCQQGQTYPFTFGGGTKLEIK | MVQLQESGPGLVKPSQSLSLTCTVTGYSITSDYTWNWIRQFPGNKLEWMGYITYSDTTSYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYCARSDGWYGFAYWGQGTLVTVSA | DIQMNQSPSSLSASLGDTITITCHASQNINVWLSWYQQKPGNIPKLLIYKAFDLHTGVPSRFSGSGSGTGFTLTISSLQPEDIATYYCQQGQTYPFTFGGGTKLEIK | 13.962713 | 13.481047 | 118 | 107 | 118 | 107 | 118 | 107 | 40 | 1h9 fab heavy chain | 1h9 fab light chain | mus musculus | mus musculus | A | protein | hemagglutinin | h7n9 subtype | 46 | 19 | 0.83 | HL | train |
8iuz_B_C | 8iuz | h7n9 ha-2d7 fab | no | membrane protein/immune system | 2023-03-25 | 2024-04-24 | electron microscopy | 3 | N.A. | N.A. | 39704525 | 10.1128/jvi.01400-24 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | B | C | MVQLQESGPGLVKPSQSLSLTCTVTGYSITSDYTWNWIRQFPGNKLEWMGYISYSGSTSYNPSLKSRMSITRDTSKNQFLLQLNSVTTADTATYYCTRDGPYWHIDVWGAGTTVTVSS | DIQMNQSPSSLSASLGDTITITCHASQTINIWLSWYQLKPGNIPKLLIYKASNLHTGVPSRFSGSGSGTGFTLTISSLQPEDIASYYCQQGQSFPYTFGGGTKLEIK | MVQLQESGPGLVKPSQSLSLTCTVTGYSITSDYTWNWIRQFPGNKLEWMGYISYSGSTSYNPSLKSRMSITRDTSKNQFLLQLNSVTTADTATYYCTRDGPYWHIDVWGAGTTVTVSS | DIQMNQSPSSLSASLGDTITITCHASQTINIWLSWYQLKPGNIPKLLIYKASNLHTGVPSRFSGSGSGTGFTLTISSLQPEDIASYYCQQGQSFPYTFGGGTKLEIK | 13.971351 | 13.567266 | 118 | 107 | 118 | 107 | 118 | 107 | 43 | 2d7 fab heavy chain | 2d7 fab light chain | mus musculus | mus musculus | A | protein | hemagglutinin | h7n9 subtype | 39 | 16 | 0.84 | HL | train |
8iv4_A_B | 8iv4 | cryo-em structure of sars-cov-2 spike protein in complex with double nabs 8h12 and 3e2 (local refinement) | no | viral protein/immune system | 2023-03-26 | 2023-08-16 | electron microscopy | 3.59 | N.A. | N.A. | 37470320 | 10.1093/procel/pwad040 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | A | B | EVKLEESGGGLVQPGGSMKLSCAASGFTFSDAWMDWVRQSPEKGLEWVAQIRRKANNHATYYAESVKGRFTISRDDSKSSVYLQMNSLRAEDTGIYYCIRGMTYAMDFWGQGTSVTVSS | DIVMTQFQKFMSTSVGDRVSITCKASQNVRTAVAWYQQKPGQSPKAMIYLASNRHRGVPDRFTGSGCGTDFTLTISNVQCEDLADYFCLQHRNYPLTFGGGTKLEIK | EVKLEESGGGLVQPGGSMKLSCAASGFTFSDAWMDWVRQSPEKGLEWVAQIRRKANNHATYYAESVKGRFTISRDDSKSSVYLQMNSLRAEDTGIYYCIRGMTYAMDFWGQGTSVTVS | DIVMTQFQKFMSTSVGDRVSITCKASQNVRTAVAWYQQKPGQSPKAMIYLASNRHRGVPDRFTGSGCGTDFTLTISNVQCEDLADYFCLQHRNYPLTFGGGTKLEIK | 13.821562 | 13.52178 | 119 | 107 | 118 | 107 | 118 | 107 | 36 | heavy chain of 8h12 | light chain of 8h12 | mus musculus | mus musculus | G | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 31 | 15 | 0.88 | HL | train |
8iv4_H_L | 8iv4 | cryo-em structure of sars-cov-2 spike protein in complex with double nabs 8h12 and 3e2 (local refinement) | no | viral protein/immune system | 2023-03-26 | 2023-08-16 | electron microscopy | 3.59 | N.A. | N.A. | 37470320 | 10.1093/procel/pwad040 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | H | L | EVMLVESGGGVVKPGGSLKLSCAASGFSFSTYAMSWIRQTPEKSLEWVAAISSGGTNTYYPGSVKGRFTISRDKAMNTLYLQLSSLRSEDTAMYYCVRHSGNYVDSVMDYWGQGTSVTVSS | QIVLTQSPAIMSASLGEEITLTCSVSSSVSDMHWYQQKSGTSPKVFIYSTSNLASGVPSRFSGSGSGTFYSLTISSVEAEDAAYYYCHQWSSWTFGGGTKLEIK | EVMLVESGGGVVKPGGSLKLSCAASGFSFSTYAMSWIRQTPEKSLEWVAAISSGGTNTYYPGSVKGRFTISRDKAMNTLYLQLSSLRSEDTAMYYCVRHSGNYVDSVMDYWGQGTSVTVSS | QIVLTQSPAIMSASLGEEITLTCSVSSSVSDMHWYQQKSGTSPKVFIYSTSNLASGVPSRFSGSGSGTFYSLTISSVEAEDAAYYYCHQWSSWTFGGGTKLEIK | 13.655406 | 13.029429 | 121 | 104 | 121 | 104 | 121 | 104 | 41 | heavy chain of 3e2 | light chain of 3e2 | mus musculus | mus musculus | G | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 39 | 16 | 0.73 | HL | train |
8iv5_A_B | 8iv5 | cryo-em structure of sars-cov-2 spike protein in complex with double nabs 8h12 and 1c4 (local refinement) | no | viral protein/immune system | 2023-03-26 | 2023-08-16 | electron microscopy | 3.77 | N.A. | N.A. | 37470320 | 10.1093/procel/pwad040 | 0 | auth_asym_id | VH:VL | IGHV7 | IGKV3 | A | B | QIQLVQSGPELKKPGETVKISCKASGYTFTDYGLNWVKQAPGKGLKWMGWINTYSGEPTYNDEFRGRFAFSLETSTITAYLKINNLKNEDTATYFCARGGNWDWYFDVWGAGTTVTVSS | DIVLTQSPATLSVTPGDNVSLSCRASQIISNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQQSNTWPLTCGSGTKLELN | QIQLVQSGPELKKPGETVKISCKASGYTFTDYGLNWVKQAPGKGLKWMGWINTYSGEPTYNDEFRGRFAFSLETSTITAYLKINNLKNEDTATYFCARGGNWDWYFDVWGAGTTVTVSS | DIVLTQSPATLSVTPGDNVSLSCRASQIISNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQQSNTWPLTCGSGTKLELN | 14.016153 | 13.34043 | 119 | 107 | 119 | 107 | 119 | 107 | 38 | heavy chain of 1c4 | light chain of 1c4 | mus musculus | mus musculus | G | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 35 | 18 | 1 | HL | train |
8iv5_H_L | 8iv5 | cryo-em structure of sars-cov-2 spike protein in complex with double nabs 8h12 and 1c4 (local refinement) | no | viral protein/immune system | 2023-03-26 | 2023-08-16 | electron microscopy | 3.77 | N.A. | N.A. | 37470320 | 10.1093/procel/pwad040 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | EVKLEESGGGLVQPGGSMKLSCAASGFTFSDAWMDWVRQSPEKGLEWVAQIRRKANNHATYYAESVKGRFTISRDDSKSSVYLQMNSLRAEDTGIYYCIRGMTYAMDFWGQGTSVTVSS | DIVMTQFQKFMSTSVGDRVSITCKASQNVRTAVAWYQQKPGQSPKAMIYLASNRHRGVPDRFTGSGCGTDFTLTISNVQCEDLADYFCLQHRNYPLTFGGGTKLEIK | EVKLEESGGGLVQPGGSMKLSCAASGFTFSDAWMDWVRQSPEKGLEWVAQIRRKANNHATYYAESVKGRFTISRDDSKSSVYLQMNSLRAEDTGIYYCIRGMTYAMDFWGQGTSVTVS | DIVMTQFQKFMSTSVGDRVSITCKASQNVRTAVAWYQQKPGQSPKAMIYLASNRHRGVPDRFTGSGCGTDFTLTISNVQCEDLADYFCLQHRNYPLTFGGGTKLEIK | 13.846089 | 13.564263 | 119 | 107 | 118 | 107 | 118 | 107 | 37 | heavy chain of 8h12 | light chain of 8h12 | mus musculus | mus musculus | G | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 43 | 18 | 0.78 | HL | train |
8s9g_H_L | 8s9g | sars-cov-2 bn.1 spike rbd bound to the human ace2 ectodomain and the s309 neutralizing antibody fab fragment | no | viral protein | 2023-03-28 | 2023-10-04 | electron microscopy | 3 | N.A. | N.A. | 37648855 | 10.1038/s41586-023-06487-6 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | H | L | QVQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYMELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQHDTSLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYMELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTV | IVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQHDTSLTFGGGTKV | 13.970079 | 12.770567 | 230 | 214 | 124 | 103 | 124 | 103 | 46 | s309 fab heavy chain | s309 fab light chain | homo sapiens | homo sapiens | E | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus | 41 | 19 | 0.9 | HL | train |
8iw1_S | 8iw1 | cryo-em structure of the pea-bound mtaar9-golf complex | yes | membrane protein | 2023-03-29 | 2023-05-31 | electron microscopy | 3.4 | N.A. | N.A. | 37225986 | 10.1038/s41586-023-06106-4 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFAVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.767965 | 0 | 285 | 0 | 233 | 0 | 247 | 0 | 0 | scfv16 | N.A. | synthetic construct | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1,guanine nucleotide-binding protein g(olf) subunit alpha;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 32;21 | 19;9 | 0.9;0.82 | H_only | train |
8iw7_S | 8iw7 | cryo-em structure of the pea-bound mtaar9-gs complex | no | membrane protein | 2023-03-29 | 2023-05-31 | electron microscopy | 2.97 | N.A. | N.A. | 37225986 | 10.1038/s41586-023-06106-4 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFAVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.421919 | 0 | 285 | 0 | 231 | 0 | 247 | 0 | 0 | scfv16 | N.A. | escherichia coli bl21(de3) | N.A. | B;A | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein subunit alpha isoforms short | homo sapiens;homo sapiens | 23;32 | 9;19 | 0.82;0.95 | H_only | train |
8ivx_H_L | 8ivx | crystal structure of nrp2 in complex with anrp2-14 fab fragment | no | membrane protein | 2023-03-29 | 2023-07-12 | x-ray diffraction | 1.9 | 0.225 | 0.191 | 37134152 | 10.1126/scitranslmed.adf1128 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | H | L | QVQLKQSGPGLVQPSQSLSITCTVSGFSLTSYGVHWVRQSPGKGLEWLGLIWSGGSTDYSPAFISRLSISEDNSKSQVFFKMNSLQADDTAIYFCARNSYSSGYYAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGGSHHHHHH | DIVMTQSQKFMSTTVGDRVSITCKASQNVGTAVAWYQQKPGQSPKLLIYSASNRYTGVPDRFTGSGSGTDFTLTISNMQSEDLADYFCQQYSSYPPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | QVQLKQSGPGLVQPSQSLSITCTVSGFSLTSYGVHWVRQSPGKGLEWLGLIWSGGSTDYSPAFISRLSISEDNSKSQVFFKMNSLQADDTAIYFCARNSYSSGYYAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRD | DIVMTQSQKFMSTTVGDRVSITCKASQNVGTAVAWYQQKPGQSPKLLIYSASNRYTGVPDRFTGSGSGTDFTLTISNMQSEDLADYFCQQYSSYPPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN | 20.784883 | 23.179367 | 231 | 215 | 215 | 213 | 221 | 213 | 93 | heavy chain of antibody 14v4 fab fragment | light chain of antibody 14v4 fab fragment | homo sapiens | homo sapiens | A | protein | anrp2-14 | homo sapiens | 55 | 19 | 0.7 | HL | train |
8omu_B | 8omu | cryo-em structure of rat slc22a6 bound to alpha-ketoglutaric acid in a low occupancy state | no | metal transport | 2023-03-31 | 2023-07-19 | electron microscopy | 3.43 | N.A. | N.A. | 37482561 | 10.1038/s41594-023-01039-y | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | MAGSSSQVQLVESGGGLVQAGGSLRLSCAASGFPVKTEWMEWYRQAPGKEREWVAAIWSYGSGTRYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCLVRVGSWYHGQGTQVTVSAGRAGEQKLISEEDLNSAVDHHHHHH | N.A. | QVQLVESGGGLVQAGGSLRLSCAASGFPVKTEWMEWYRQAPGKEREWVAAIWSYGSGTRYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCLVRVGSWYHGQGTQVTVSA | N.A. | 13.549112 | 0 | 146 | 0 | 115 | 0 | 115 | 0 | 0 | synthetic nanobody (sybody) | N.A. | synthetic construct | N.A. | A | protein | solute carrier family 22 member 6 | rattus norvegicus | 30 | 6 | 0.43 | H_only | train |
8omz_B | 8omz | wide inward-open unliganded uraa in complex with a conformation-selective synthetic nanobody | yes | membrane protein | 2023-03-31 | 2024-04-10 | x-ray diffraction | 3.5 | 0.26 | 0.241 | 39209842 | 10.1038/s41467-024-51814-8 | 0 | auth_asym_id | VH | IGHV3 | N.A. | B | N.A. | GSSSQVQLVESGGGSVQAGGSLRLSCAASGNIAYIHYLGWFRQAPGKEREGVAALSTTLGNTYYADSVKGRFTVSLDNAKNTVYLQMNSLKPEDTALYYCAAAYFGYSSPLAHERYMYWGQGTQVTVSAGRAGEQKLISEEDLNSAVDHHHHHH | N.A. | SSQVQLVESGGGSVQAGGSLRLSCAASGNIAYIHYLGWFRQAPGKEREGVAALSTTLGNTYYADSVKGRFTVSLDNAKNTVYLQMNSLKPEDTALYYCAAAYFGYSSPLAHERYMYWGQGTQVTVSA | N.A. | 13.925131 | 0 | 154 | 0 | 127 | 0 | 127 | 0 | 0 | sy45 | N.A. | synthetic construct | N.A. | A | protein | uracil permease | escherichia coli o157:h7 | 56 | 20 | 0.87 | H_only | train |
8omz_D | 8omz | wide inward-open unliganded uraa in complex with a conformation-selective synthetic nanobody | yes | membrane protein | 2023-03-31 | 2024-04-10 | x-ray diffraction | 3.5 | 0.26 | 0.241 | 39209842 | 10.1038/s41467-024-51814-8 | 0 | auth_asym_id | VH | IGHV3 | N.A. | D | N.A. | GSSSQVQLVESGGGSVQAGGSLRLSCAASGNIAYIHYLGWFRQAPGKEREGVAALSTTLGNTYYADSVKGRFTVSLDNAKNTVYLQMNSLKPEDTALYYCAAAYFGYSSPLAHERYMYWGQGTQVTVSAGRAGEQKLISEEDLNSAVDHHHHHH | N.A. | SQVQLVESGGGSVQAGGSLRLSCAASGNIAYIHYLGWFRQAPGKEREGVAALSTTLGNTYYADSVKGRFTVSLDNAKNTVYLQMNSLKPEDTALYYCAAAYFGYSSPLAHERYMYWGQGTQVTVSA | N.A. | 13.823222 | 0 | 154 | 0 | 126 | 0 | 126 | 0 | 0 | sy45 | N.A. | synthetic construct | N.A. | C | protein | uracil permease | escherichia coli o157:h7 | 57 | 20 | 0.8 | H_only | train |
8san_C_D | 8san | cryoem structure of vrc01-ch848.0836.10 | no | viral protein/immune system | 2023-04-01 | 2023-04-19 | electron microscopy | 4.6 | N.A. | N.A. | 37188681 | 10.1038/s41467-023-38108-1 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | C | D | QVQLVQSGGQMKKPGESMRISCRASGYEFIDCTLNWIRLAPGKRPEWMGWLKPRGGAVNYARPLQGRVTMTRDVYSDTAFLELRSLTVDDTAVYFCTRGKNCDYNWDFEHWGRGTPVIVSSPSTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAEPKSC | EIVLTQSPGTLSLSPGETAIISCRTSQYGSLAWYQQRPGQAPRLVIYSGSTRAAGIPDRFSGSRWGPDYNLTISNLESGDFGVYYCQQYEFFGQGTKVQVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC | QVQLVQSGGQMKKPGESMRISCRASGYEFIDCTLNWIRLAPGKRPEWMGWLKPRGGAVNYARPLQGRVTMTRDVYSDTAFLELRSLTVDDTAVYFCTRGKNCDYNWDFEHWGRGTPVIVSS | EIVLTQSPGTLSLSPGETAIISCRTSQYGSLAWYQQRPGQAPRLVIYSGSTRAAGIPDRFSGSRWGPDYNLTISNLESGDFGVYYCQQYEFFGQGTKVQVD | 14.33326 | 13.179659 | 224 | 210 | 121 | 101 | 121 | 101 | 36 | vcr01 variable heavy chain | vcr01 variable light chain | homo sapiens | homo sapiens | A | protein | ch848.0836.10 gp120 | hiv-1 06tg.ht008 | 59 | 13 | 0.48 | HL | train |
8san_G_H | 8san | cryoem structure of vrc01-ch848.0836.10 | no | viral protein/immune system | 2023-04-01 | 2023-04-19 | electron microscopy | 4.6 | N.A. | N.A. | 37188681 | 10.1038/s41467-023-38108-1 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | G | H | QVQLVQSGGQMKKPGESMRISCRASGYEFIDCTLNWIRLAPGKRPEWMGWLKPRGGAVNYARPLQGRVTMTRDVYSDTAFLELRSLTVDDTAVYFCTRGKNCDYNWDFEHWGRGTPVIVSSPSTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAEPKSC | EIVLTQSPGTLSLSPGETAIISCRTSQYGSLAWYQQRPGQAPRLVIYSGSTRAAGIPDRFSGSRWGPDYNLTISNLESGDFGVYYCQQYEFFGQGTKVQVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC | QVQLVQSGGQMKKPGESMRISCRASGYEFIDCTLNWIRLAPGKRPEWMGWLKPRGGAVNYARPLQGRVTMTRDVYSDTAFLELRSLTVDDTAVYFCTRGKNCDYNWDFEHWGRGTPVIVSS | EIVLTQSPGTLSLSPGETAIISCRTSQYGSLAWYQQRPGQAPRLVIYSGSTRAAGIPDRFSGSRWGPDYNLTISNLESGDFGVYYCQQYEFFGQGTKVQVD | 14.344114 | 13.170053 | 224 | 210 | 121 | 101 | 121 | 101 | 40 | vcr01 variable heavy chain | vcr01 variable light chain | homo sapiens | homo sapiens | E | protein | ch848.0836.10 gp120 | hiv-1 06tg.ht008 | 53 | 13 | 0.52 | HL | train |
8san_K_L | 8san | cryoem structure of vrc01-ch848.0836.10 | no | viral protein/immune system | 2023-04-01 | 2023-04-19 | electron microscopy | 4.6 | N.A. | N.A. | 37188681 | 10.1038/s41467-023-38108-1 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | K | L | QVQLVQSGGQMKKPGESMRISCRASGYEFIDCTLNWIRLAPGKRPEWMGWLKPRGGAVNYARPLQGRVTMTRDVYSDTAFLELRSLTVDDTAVYFCTRGKNCDYNWDFEHWGRGTPVIVSSPSTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAEPKSC | EIVLTQSPGTLSLSPGETAIISCRTSQYGSLAWYQQRPGQAPRLVIYSGSTRAAGIPDRFSGSRWGPDYNLTISNLESGDFGVYYCQQYEFFGQGTKVQVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC | QVQLVQSGGQMKKPGESMRISCRASGYEFIDCTLNWIRLAPGKRPEWMGWLKPRGGAVNYARPLQGRVTMTRDVYSDTAFLELRSLTVDDTAVYFCTRGKNCDYNWDFEHWGRGTPVIVSS | EIVLTQSPGTLSLSPGETAIISCRTSQYGSLAWYQQRPGQAPRLVIYSGSTRAAGIPDRFSGSRWGPDYNLTISNLESGDFGVYYCQQYEFFGQGTKVQVD | 14.310142 | 13.17666 | 224 | 210 | 121 | 101 | 121 | 101 | 41 | vcr01 variable heavy chain | vcr01 variable light chain | homo sapiens | homo sapiens | I | protein | ch848.0836.10 gp120 | hiv-1 06tg.ht008 | 59 | 14 | 0.52 | HL | train |
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