PDB_ID_chain stringlengths 6 10 | PDB_ID stringlengths 4 4 | Title stringlengths 4 230 | Mutation(s) stringclasses 2
values | Classification stringclasses 305
values | Deposit_date stringdate 1976-03-17 00:00:00 2026-01-20 00:00:00 | Release_date stringdate 1976-05-19 00:00:00 2026-02-25 00:00:00 | Method stringclasses 5
values | Resolution stringclasses 459
values | R_free stringclasses 227
values | R_work stringclasses 211
values | PMID stringlengths 4 8 | DOI stringlengths 4 68 | Model_index int64 0 76 | Asym_ID_type stringclasses 2
values | Ab_type stringclasses 30
values | H_subgroup stringclasses 8
values | L_subgroup stringclasses 19
values | H_chain_ID stringclasses 60
values | L_chain_ID stringclasses 58
values | H_fas_seq stringlengths 4 919 | L_fas_seq stringlengths 4 627 | H_filled_pdb_seq stringlengths 4 896 | L_filled_pdb_seq stringlengths 4 523 | H_mean_radius float64 0 79.7 | L_mean_radius float64 0 84.3 | H_fas_seq_len int64 0 919 | L_fas_seq_len int64 0 627 | H_pdb_seq_len int64 0 879 | L_pdb_seq_len int64 0 523 | H_filled_seq_len int64 0 896 | L_filled_seq_len int64 0 523 | HL_inf_res_num int64 0 175 | H_mol_name stringlengths 2 331 | L_mol_name stringlengths 2 151 | H_species stringclasses 68
values | L_species stringclasses 42
values | Ag_chain_ID(s) stringclasses 279
values | Ag_type(s) stringclasses 16
values | Ag_mol_name(s) stringlengths 2 390 | Ag_species stringclasses 743
values | Ab_ag_inf_res_num stringlengths 1 11 | CDR_inf_res_num stringclasses 444
values | CDR_inf_res_ratio stringlengths 1 19 | hl_label stringclasses 3
values | split stringclasses 1
value |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
8ibu_E | 8ibu | cryo-em structure of the erythromycin-bound motilin receptor-gq protein complex | no | signaling protein | 2023-02-10 | 2023-04-12 | electron microscopy | 3.51 | N.A. | N.A. | 36921049 | 10.1126/sciadv.ade9020 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.585253 | 0 | 247 | 0 | 230 | 0 | 247 | 0 | 0 | scfv16 | N.A. | homo sapiens | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(q) subunit alpha;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 28;25 | 17;10 | 1.0;0.83 | H_only | train |
8ibv_E | 8ibv | cryo-em structure of the motilin-bound motilin receptor-gq protein complex | no | signaling protein | 2023-02-10 | 2023-04-12 | electron microscopy | 3.19 | N.A. | N.A. | 36921049 | 10.1126/sciadv.ade9020 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.435398 | 0 | 247 | 0 | 230 | 0 | 247 | 0 | 0 | scfv16 | N.A. | homo sapiens | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(q) subunit alpha;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 31;24 | 19;9 | 0.95;0.75 | H_only | train |
8cim_D_E | 8cim | ba.2-07 fab in complex with sars-cov-2 ba.2.12.1 spike glycoprotein | yes | virus | 2023-02-10 | 2023-07-05 | electron microscopy | 3 | N.A. | N.A. | N.A. | 10.21203/rs.3.rs-2684849/v1 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | D | E | EVQLVQSGAEVKEPGSSVKVSCKASGGSFSTSGISWVRQAPGQGLEWMGVIIPIQGTGNYAQKFQGRVTITADESTTTVYMELSSLRSDDTALYYCARDQHIYDSSGHGGLWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | AIRMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKVLIYGASSLHSGVPSRFSGSGSGTDFTLTISRLQPEDFATYYCQQSHSSPRSFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVQSGAEVKEPGSSVKVSCKASGGSFSTSGISWVRQAPGQGLEWMGVIIPIQGTGNYAQKFQGRVTITADESTTTVYMELSSLRSDDTALYYCARDQHIYDSSGHGGLWFDPWGQGTLVTVSS | AIRMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKVLIYGASSLHSGVPSRFSGSGSGTDFTLTISRLQPEDFATYYCQQSHSSPRSFGGGTKVEIK | 14.566974 | 13.176654 | 231 | 214 | 126 | 107 | 126 | 107 | 45 | ba.2-07 fab heavy chain | ba.2-07 fab light chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein,fibritin | severe acute respiratory syndrome coronavirus 2 | 47 | 22 | 0.88 | HL | train |
8cim_F_G | 8cim | ba.2-07 fab in complex with sars-cov-2 ba.2.12.1 spike glycoprotein | yes | virus | 2023-02-10 | 2023-07-05 | electron microscopy | 3 | N.A. | N.A. | N.A. | 10.21203/rs.3.rs-2684849/v1 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | F | G | EVQLVQSGAEVKEPGSSVKVSCKASGGSFSTSGISWVRQAPGQGLEWMGVIIPIQGTGNYAQKFQGRVTITADESTTTVYMELSSLRSDDTALYYCARDQHIYDSSGHGGLWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | AIRMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKVLIYGASSLHSGVPSRFSGSGSGTDFTLTISRLQPEDFATYYCQQSHSSPRSFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVQSGAEVKEPGSSVKVSCKASGGSFSTSGISWVRQAPGQGLEWMGVIIPIQGTGNYAQKFQGRVTITADESTTTVYMELSSLRSDDTALYYCARDQHIYDSSGHGGLWFDPWGQGTLVTVSS | AIRMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKVLIYGASSLHSGVPSRFSGSGSGTDFTLTISRLQPEDFATYYCQQSHSSPRSFGGGTKVEIK | 14.565183 | 13.174299 | 231 | 214 | 126 | 107 | 126 | 107 | 46 | ba.2-07 fab heavy chain | ba.2-07 fab light chain | homo sapiens | homo sapiens | B | protein | spike glycoprotein,fibritin | severe acute respiratory syndrome coronavirus 2 | 45 | 21 | 0.84 | HL | train |
8cim_H_L | 8cim | ba.2-07 fab in complex with sars-cov-2 ba.2.12.1 spike glycoprotein | yes | virus | 2023-02-10 | 2023-07-05 | electron microscopy | 3 | N.A. | N.A. | N.A. | 10.21203/rs.3.rs-2684849/v1 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | H | L | EVQLVQSGAEVKEPGSSVKVSCKASGGSFSTSGISWVRQAPGQGLEWMGVIIPIQGTGNYAQKFQGRVTITADESTTTVYMELSSLRSDDTALYYCARDQHIYDSSGHGGLWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | AIRMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKVLIYGASSLHSGVPSRFSGSGSGTDFTLTISRLQPEDFATYYCQQSHSSPRSFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVQSGAEVKEPGSSVKVSCKASGGSFSTSGISWVRQAPGQGLEWMGVIIPIQGTGNYAQKFQGRVTITADESTTTVYMELSSLRSDDTALYYCARDQHIYDSSGHGGLWFDPWGQGTLVTVSS | AIRMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKVLIYGASSLHSGVPSRFSGSGSGTDFTLTISRLQPEDFATYYCQQSHSSPRSFGGGTKVEIK | 14.567281 | 13.173078 | 231 | 214 | 126 | 107 | 126 | 107 | 49 | ba.2-07 fab heavy chain | ba.2-07 fab light chain | homo sapiens | homo sapiens | C | protein | spike glycoprotein,fibritin | severe acute respiratory syndrome coronavirus 2 | 46 | 21 | 0.81 | HL | train |
8g4m_D_E | 8g4m | vaccine-elicited human antibody 2c06 in complex with hiv-1 envelope trimer bg505 ds-sosip | yes | antiviral protein | 2023-02-10 | 2023-07-12 | electron microscopy | 2.95 | N.A. | N.A. | 37436899 | 10.1016/j.celrep.2023.112755 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | D | E | EVQLVESGGGLVQPGGSLRLSCSASGFTFSSYAMHWVRQAPGKGLEYVSAISGNGDSTYYADSVRGRFTISRDNSKNTLYLQMSSLRAEDTAVYYCVKQAAYCTRTSCYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ | EIVMTQSPATLSVSPGERATLSCRASQGVSSKLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYHNWPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCSASGFTFSSYAMHWVRQAPGKGLEYVSAISGNGDSTYYADSVRGRFTISRDNSKNTLYLQMSSLRAEDTAVYYCVKQAAYCTRTSCYYFDYWGQGTLVTVSS | EIVMTQSPATLSVSPGERATLSCRASQGVSSKLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYHNWPYTFGQGTKLEIK | 14.006059 | 13.08341 | 236 | 214 | 124 | 107 | 124 | 107 | 44 | antibody heavy chain | antibody light chain | homo sapiens | homo sapiens | C;A | protein;protein | envelope glycoprotein gp120;envelope glycoprotein gp41 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 27;39 | 8;23 | 0.53;0.92 | HL | train |
8g4m_J_K | 8g4m | vaccine-elicited human antibody 2c06 in complex with hiv-1 envelope trimer bg505 ds-sosip | yes | antiviral protein | 2023-02-10 | 2023-07-12 | electron microscopy | 2.95 | N.A. | N.A. | 37436899 | 10.1016/j.celrep.2023.112755 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | J | K | EVQLVESGGGLVQPGGSLRLSCSASGFTFSSYAMHWVRQAPGKGLEYVSAISGNGDSTYYADSVRGRFTISRDNSKNTLYLQMSSLRAEDTAVYYCVKQAAYCTRTSCYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ | EIVMTQSPATLSVSPGERATLSCRASQGVSSKLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYHNWPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCSASGFTFSSYAMHWVRQAPGKGLEYVSAISGNGDSTYYADSVRGRFTISRDNSKNTLYLQMSSLRAEDTAVYYCVKQAAYCTRTSCYYFDYWGQGTLVTVSS | EIVMTQSPATLSVSPGERATLSCRASQGVSSKLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYHNWPYTFGQGTKLEIK | 14.013211 | 13.084873 | 236 | 214 | 124 | 107 | 124 | 107 | 44 | antibody heavy chain | antibody light chain | homo sapiens | homo sapiens | G;B | protein;protein | envelope glycoprotein gp120;envelope glycoprotein gp41 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 26;35 | 8;20 | 0.53;0.91 | HL | train |
8g4m_H_L | 8g4m | vaccine-elicited human antibody 2c06 in complex with hiv-1 envelope trimer bg505 ds-sosip | yes | antiviral protein | 2023-02-10 | 2023-07-12 | electron microscopy | 2.95 | N.A. | N.A. | 37436899 | 10.1016/j.celrep.2023.112755 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | H | L | EVQLVESGGGLVQPGGSLRLSCSASGFTFSSYAMHWVRQAPGKGLEYVSAISGNGDSTYYADSVRGRFTISRDNSKNTLYLQMSSLRAEDTAVYYCVKQAAYCTRTSCYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ | EIVMTQSPATLSVSPGERATLSCRASQGVSSKLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYHNWPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCSASGFTFSSYAMHWVRQAPGKGLEYVSAISGNGDSTYYADSVRGRFTISRDNSKNTLYLQMSSLRAEDTAVYYCVKQAAYCTRTSCYYFDYWGQGTLVTVSS | EIVMTQSPATLSVSPGERATLSCRASQGVSSKLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYHNWPYTFGQGTKLEIK | 14.029308 | 13.082363 | 236 | 214 | 124 | 107 | 124 | 107 | 46 | antibody heavy chain | antibody light chain | homo sapiens | homo sapiens | I;F | protein;protein | envelope glycoprotein gp120;envelope glycoprotein gp41 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 26;38 | 8;21 | 0.53;0.88 | HL | train |
8g4t_D_E | 8g4t | vaccine-elicited human antibody 2c09 in complex with hiv-1 envelope trimer bg505 ds-sosip | yes | viral protein/immune system | 2023-02-10 | 2023-07-12 | electron microscopy | 2.81 | N.A. | N.A. | 37436899 | 10.1016/j.celrep.2023.112755 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | D | E | EVQLVESGEGLVQPGGSLRLSCAASGFTFSSHAMHWVRQAPGKGLEYVSAISSEGGSTYYADSVRGRFIISRDNSKNTLYLQMGSLRAEDMAVYYCARVTGDYNWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ | EIVMTQSPATLSVSPGERATLSCRASQGVSSNLAWYQQKPGQAPRLLIHGASTRATGSPARFSGSGSGTEFTLTISSLQSEDFAVYSCQQYHNWPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGEGLVQPGGSLRLSCAASGFTFSSHAMHWVRQAPGKGLEYVSAISSEGGSTYYADSVRGRFIISRDNSKNTLYLQMGSLRAEDMAVYYCARVTGDYNWYFDLWGRGTLVTVSS | EIVMTQSPATLSVSPGERATLSCRASQGVSSNLAWYQQKPGQAPRLLIHGASTRATGSPARFSGSGSGTEFTLTISSLQSEDFAVYSCQQYHNWPWTFGQGTKVEIK | 14.016238 | 13.396483 | 232 | 214 | 120 | 107 | 120 | 107 | 38 | fab 2c09 heavy chain | fab 2c09 light chain | homo sapiens | homo sapiens | A;C | protein;protein | envelope glycoprotein bg505 ds-sosip gp41;envelope glycoprotein bg505 ds-sosip gp120 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 30;23 | 16;8 | 0.89;0.62 | HL | train |
8g4t_J_K | 8g4t | vaccine-elicited human antibody 2c09 in complex with hiv-1 envelope trimer bg505 ds-sosip | yes | viral protein/immune system | 2023-02-10 | 2023-07-12 | electron microscopy | 2.81 | N.A. | N.A. | 37436899 | 10.1016/j.celrep.2023.112755 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | J | K | EVQLVESGEGLVQPGGSLRLSCAASGFTFSSHAMHWVRQAPGKGLEYVSAISSEGGSTYYADSVRGRFIISRDNSKNTLYLQMGSLRAEDMAVYYCARVTGDYNWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ | EIVMTQSPATLSVSPGERATLSCRASQGVSSNLAWYQQKPGQAPRLLIHGASTRATGSPARFSGSGSGTEFTLTISSLQSEDFAVYSCQQYHNWPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGEGLVQPGGSLRLSCAASGFTFSSHAMHWVRQAPGKGLEYVSAISSEGGSTYYADSVRGRFIISRDNSKNTLYLQMGSLRAEDMAVYYCARVTGDYNWYFDLWGRGTLVTVSS | EIVMTQSPATLSVSPGERATLSCRASQGVSSNLAWYQQKPGQAPRLLIHGASTRATGSPARFSGSGSGTEFTLTISSLQSEDFAVYSCQQYHNWPWTFGQGTKVEI | 14.009625 | 13.273648 | 232 | 214 | 120 | 106 | 120 | 106 | 41 | fab 2c09 heavy chain | fab 2c09 light chain | homo sapiens | homo sapiens | B;G | protein;protein | envelope glycoprotein bg505 ds-sosip gp41;envelope glycoprotein bg505 ds-sosip gp120 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 28;23 | 15;8 | 0.88;0.62 | HL | train |
8g4t_H_L | 8g4t | vaccine-elicited human antibody 2c09 in complex with hiv-1 envelope trimer bg505 ds-sosip | yes | viral protein/immune system | 2023-02-10 | 2023-07-12 | electron microscopy | 2.81 | N.A. | N.A. | 37436899 | 10.1016/j.celrep.2023.112755 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | H | L | EVQLVESGEGLVQPGGSLRLSCAASGFTFSSHAMHWVRQAPGKGLEYVSAISSEGGSTYYADSVRGRFIISRDNSKNTLYLQMGSLRAEDMAVYYCARVTGDYNWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKGLEVLFQ | EIVMTQSPATLSVSPGERATLSCRASQGVSSNLAWYQQKPGQAPRLLIHGASTRATGSPARFSGSGSGTEFTLTISSLQSEDFAVYSCQQYHNWPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGEGLVQPGGSLRLSCAASGFTFSSHAMHWVRQAPGKGLEYVSAISSEGGSTYYADSVRGRFIISRDNSKNTLYLQMGSLRAEDMAVYYCARVTGDYNWYFDLWGRGTLVTVSS | EIVMTQSPATLSVSPGERATLSCRASQGVSSNLAWYQQKPGQAPRLLIHGASTRATGSPARFSGSGSGTEFTLTISSLQSEDFAVYSCQQYHNWPWTFGQGTKVEI | 14.005508 | 13.268576 | 232 | 214 | 120 | 106 | 120 | 106 | 39 | fab 2c09 heavy chain | fab 2c09 light chain | homo sapiens | homo sapiens | F;I | protein;protein | envelope glycoprotein bg505 ds-sosip gp41;envelope glycoprotein bg505 ds-sosip gp120 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 28;21 | 15;9 | 0.88;0.75 | HL | train |
8ic0_E | 8ic0 | cryo-em structure of cxcl8 bound c-x-c chemokine receptor 1 in complex with gi heterotrimer | no | membrane protein/immune system | 2023-02-10 | 2023-07-19 | electron microscopy | 3.41 | N.A. | N.A. | 37433790 | 10.1038/s41467-023-39799-2 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAALEVLFQ | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.544811 | 0 | 257 | 0 | 232 | 0 | 246 | 0 | 0 | scfv16 | N.A. | mus musculus | N.A. | B;C | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 37;25 | 22;10 | 0.88;0.83 | H_only | train |
8g4n_H_L | 8g4n | native gaba-a receptor from the mouse brain, alpha1-beta2-gamma2 subtype, in complex with gaba, zolpidem, and endogenous neurosteroids | no | membrane protein | 2023-02-10 | 2023-09-20 | electron microscopy | 2.67 | N.A. | N.A. | 37730991 | 10.1038/s41586-023-06556-w | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | H | L | EIQLQQSGPELVKPGTSVKVSCKASGYSFTDYNMYWVKQSHGKSLEWIGYIDPYNADTTYNREFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYCARKRNNFYFDYWGQGTPLTVSSAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKSAALEVLFQ | YIVMTQSPKSMSMSLGERVTLSCRASEYVGSYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFAGSGSATDFTLTITSVQAEDLADYHCGQTYNYPTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EIQLQQSGPELVKPGTSVKVSCKASGYSFTDYNMYWVKQSHGKSLEWIGYIDPYNADTTYNREFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYCARKRNNFYFDYWGQGTPLTVS | YIVMTQSPKSMSMSLGERVTLSCRASEYVGSYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFAGSGSATDFTLTITSVQAEDLADYHCGQTYNYPTFGGGTKLEI | 13.832539 | 13.197216 | 223 | 213 | 117 | 105 | 117 | 105 | 42 | heavy chain of 8e3 fab | light chain of 8e3 fab | mus musculus | mus musculus | A | protein | gamma-aminobutyric acid receptor subunit alpha-1 | mus musculus | 40 | 15 | 0.71 | HL | train |
8g4n_J_K | 8g4n | native gaba-a receptor from the mouse brain, alpha1-beta2-gamma2 subtype, in complex with gaba, zolpidem, and endogenous neurosteroids | no | membrane protein | 2023-02-10 | 2023-09-20 | electron microscopy | 2.67 | N.A. | N.A. | 37730991 | 10.1038/s41586-023-06556-w | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | J | K | EIQLQQSGPELVKPGTSVKVSCKASGYSFTDYNMYWVKQSHGKSLEWIGYIDPYNADTTYNREFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYCARKRNNFYFDYWGQGTPLTVSSAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKSAALEVLFQ | YIVMTQSPKSMSMSLGERVTLSCRASEYVGSYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFAGSGSATDFTLTITSVQAEDLADYHCGQTYNYPTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EIQLQQSGPELVKPGTSVKVSCKASGYSFTDYNMYWVKQSHGKSLEWIGYIDPYNADTTYNREFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYCARKRNNFYFDYWGQGTPLTVS | YIVMTQSPKSMSMSLGERVTLSCRASEYVGSYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFAGSGSATDFTLTITSVQAEDLADYHCGQTYNYPTFGGGTKLEI | 13.829462 | 13.182584 | 223 | 213 | 117 | 105 | 117 | 105 | 44 | heavy chain of 8e3 fab | light chain of 8e3 fab | mus musculus | mus musculus | C | protein | gamma-aminobutyric acid receptor subunit alpha-1 | mus musculus | 40 | 16 | 0.8 | HL | train |
8g4o_H_L | 8g4o | native gaba-a receptor from the mouse brain, alpha1-beta2-gamma2 subtype, in complex with didesethylflurazepam and endogenous gaba | no | membrane protein | 2023-02-10 | 2023-09-20 | electron microscopy | 3.06 | N.A. | N.A. | 37730991 | 10.1038/s41586-023-06556-w | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | H | L | EIQLQQSGPELVKPGTSVKVSCKASGYSFTDYNMYWVKQSHGKSLEWIGYIDPYNADTTYNREFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYCARKRNNFYFDYWGQGTPLTVSSAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKSAALEVLFQ | YIVMTQSPKSMSMSLGERVTLSCRASEYVGSYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFAGSGSATDFTLTITSVQAEDLADYHCGQTYNYPTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EIQLQQSGPELVKPGTSVKVSCKASGYSFTDYNMYWVKQSHGKSLEWIGYIDPYNADTTYNREFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYCARKRNNFYFDYWGQGTPLTVS | YIVMTQSPKSMSMSLGERVTLSCRASEYVGSYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFAGSGSATDFTLTITSVQAEDLADYHCGQTYNYPTFGGGTKLEI | 13.835224 | 13.256509 | 223 | 213 | 117 | 105 | 117 | 105 | 42 | heavy chain of 8e3 fab | light chain of 8e3 fab | mus musculus | mus musculus | A | protein | gamma-aminobutyric acid receptor subunit alpha-1 | mus musculus | 37 | 15 | 0.83 | HL | train |
8g4o_J_K | 8g4o | native gaba-a receptor from the mouse brain, alpha1-beta2-gamma2 subtype, in complex with didesethylflurazepam and endogenous gaba | no | membrane protein | 2023-02-10 | 2023-09-20 | electron microscopy | 3.06 | N.A. | N.A. | 37730991 | 10.1038/s41586-023-06556-w | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | J | K | EIQLQQSGPELVKPGTSVKVSCKASGYSFTDYNMYWVKQSHGKSLEWIGYIDPYNADTTYNREFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYCARKRNNFYFDYWGQGTPLTVSSAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKSAALEVLFQ | YIVMTQSPKSMSMSLGERVTLSCRASEYVGSYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFAGSGSATDFTLTITSVQAEDLADYHCGQTYNYPTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EIQLQQSGPELVKPGTSVKVSCKASGYSFTDYNMYWVKQSHGKSLEWIGYIDPYNADTTYNREFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYCARKRNNFYFDYWGQGTPLTVS | YIVMTQSPKSMSMSLGERVTLSCRASEYVGSYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFAGSGSATDFTLTITSVQAEDLADYHCGQTYNYPTFGGGTKLEI | 13.832846 | 13.253779 | 223 | 213 | 117 | 105 | 117 | 105 | 45 | heavy chain of 8e3 fab | light chain of 8e3 fab | mus musculus | mus musculus | C | protein | gamma-aminobutyric acid receptor subunit alpha-1 | mus musculus | 36 | 15 | 0.83 | HL | train |
8g4p_A_B | 8g4p | crystal structure of the peanut allergen ara h 2 bound by two neutralizing antibodies 13t1 and 13t5 | no | allergen | 2023-02-10 | 2023-12-20 | x-ray diffraction | 2.25 | 0.217 | 0.189 | 38168500 | 10.1111/cea.14433 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | A | B | QVQLQESGPGLVKPSETLSLTCTVSGGSMSSYYWGWIRQPAGRGLEWIGRIFTTGSTIYNASLNSRVSMSVDTSKNQFSLKLTSVTAADTALYFCVRDRRGRSHDSNWYWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTH | DIVMTQSPSSLSASVGDRVIITCRTSQTLSRNLNWYQQKPGEAPKLLIYGASTLQSGVPSRFTGSGSGTDFTLIISSLQPEDFATYYCQQSDNTPRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQESGPGLVKPSETLSLTCTVSGGSMSSYYWGWIRQPAGRGLEWIGRIFTTGSTIYNASLNSRVSMSVDTSKNQFSLKLTSVTAADTALYFCVRDRRGRSHDSNWYWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | DIVMTQSPSSLSASVGDRVIITCRTSQTLSRNLNWYQQKPGEAPKLLIYGASTLQSGVPSRFTGSGSGTDFTLIISSLQPEDFATYYCQQSDNTPRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 21.298687 | 23.611517 | 232 | 214 | 222 | 214 | 226 | 214 | 107 | 13t5 fab heavy chain | 13t5 fab light chain | homo sapiens | homo sapiens | E | protein | ara h 2 allergen | arachis hypogaea | 33 | 15 | 1 | HL | train |
8g4p_C_D | 8g4p | crystal structure of the peanut allergen ara h 2 bound by two neutralizing antibodies 13t1 and 13t5 | no | allergen | 2023-02-10 | 2023-12-20 | x-ray diffraction | 2.25 | 0.217 | 0.189 | 38168500 | 10.1111/cea.14433 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | C | D | EVQLVESGGGVVQPGGSLRLSCVASGFKFQNYGMSWVRQAPGKGLEWVADISGSDESTYYADSVKGRFTISRDTSKNTLHLQMSSPRAEDTALYYCAKATAPAGKYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTH | EIVMTQSPATLSLSPGEIATLSCRASQTVSSYLAWYQLKPGQAPRLLIYDASRRAAGIPARFSGSESGTDFTLTISSLEPEDSAVYYCHQRSNWPPVHTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGVVQPGGSLRLSCVASGFKFQNYGMSWVRQAPGKGLEWVADISGSDESTYYADSVKGRFTISRDTSKNTLHLQMSSPRAEDTALYYCAKATAPAGKYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | MTQSPATLSLSPGEIATLSCRASQTVSSYLAWYQLKPGQAPRLLIYDASRRAAGIPARFSGSESGTDFTLTISSLEPEDSAVYYCHQRSNWPPVHTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 21.11446 | 23.28012 | 231 | 216 | 225 | 212 | 225 | 212 | 106 | 13t1 fab heavy chain | 13t1 fab light chain | homo sapiens | homo sapiens | E | protein | ara h 2 allergen | arachis hypogaea | 41 | 16 | 0.8 | HL | train |
8cin_H_L | 8cin | ba.4/5-5 fab in complex with sars-cov-2 ba.4 spike glycoprotein | yes | viral protein | 2023-02-10 | 2024-02-21 | electron microscopy | 2.7 | N.A. | N.A. | 38548763 | 10.1038/s41467-024-46982-6 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGLV2 | H | L | QVQLVESGPGLVKPSETLSLTCSVSGGSIDNFYWSWIRQPPGKGLEWIGNIYYGGSGNYNPSLKSRVTISVDTSKNQVSLKLRSVTAADTAVYYCARDSVWYTGSYGLIYWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS | SVVTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWFQQHPGKAPKLMIYEVTKRPSGISNRFSGSKSGNTASLTISRLQAEDEADYYCCSYAGSSTVVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC | QVQLVESGPGLVKPSETLSLTCSVSGGSIDNFYWSWIRQPPGKGLEWIGNIYYGGSGNYNPSLKSRVTISVDTSKNQVSLKLRSVTAADTAVYYCARDSVWYTGSYGLIYWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS | SVVTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWFQQHPGKAPKLMIYEVTKRPSGISNRFSGSKSGNTASLTISRLQAEDEADYYCCSYAGSSTVVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC | 21.213037 | 24.171757 | 223 | 214 | 223 | 214 | 223 | 214 | 96 | ba.4/5-5 fab heavy chain | ba.4/5-5 fab light chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 33 | 15 | 0.88 | HL | train |
8cin_E_F | 8cin | ba.4/5-5 fab in complex with sars-cov-2 ba.4 spike glycoprotein | yes | viral protein | 2023-02-10 | 2024-02-21 | electron microscopy | 2.7 | N.A. | N.A. | 38548763 | 10.1038/s41467-024-46982-6 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGLV2 | E | F | QVQLVESGPGLVKPSETLSLTCSVSGGSIDNFYWSWIRQPPGKGLEWIGNIYYGGSGNYNPSLKSRVTISVDTSKNQVSLKLRSVTAADTAVYYCARDSVWYTGSYGLIYWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS | SVVTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWFQQHPGKAPKLMIYEVTKRPSGISNRFSGSKSGNTASLTISRLQAEDEADYYCCSYAGSSTVVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC | QVQLVESGPGLVKPSETLSLTCSVSGGSIDNFYWSWIRQPPGKGLEWIGNIYYGGSGNYNPSLKSRVTISVDTSKNQVSLKLRSVTAADTAVYYCARDSVWYTGSYGLIYWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS | SVVTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWFQQHPGKAPKLMIYEVTKRPSGISNRFSGSKSGNTASLTISRLQAEDEADYYCCSYAGSSTVVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC | 21.246965 | 24.14018 | 223 | 214 | 223 | 214 | 223 | 214 | 101 | ba.4/5-5 fab heavy chain | ba.4/5-5 fab light chain | homo sapiens | homo sapiens | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 33 | 15 | 0.88 | HL | train |
8cin_J_K | 8cin | ba.4/5-5 fab in complex with sars-cov-2 ba.4 spike glycoprotein | yes | viral protein | 2023-02-10 | 2024-02-21 | electron microscopy | 2.7 | N.A. | N.A. | 38548763 | 10.1038/s41467-024-46982-6 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGLV2 | J | K | QVQLVESGPGLVKPSETLSLTCSVSGGSIDNFYWSWIRQPPGKGLEWIGNIYYGGSGNYNPSLKSRVTISVDTSKNQVSLKLRSVTAADTAVYYCARDSVWYTGSYGLIYWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS | SVVTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWFQQHPGKAPKLMIYEVTKRPSGISNRFSGSKSGNTASLTISRLQAEDEADYYCCSYAGSSTVVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC | QVQLVESGPGLVKPSETLSLTCSVSGGSIDNFYWSWIRQPPGKGLEWIGNIYYGGSGNYNPSLKSRVTISVDTSKNQVSLKLRSVTAADTAVYYCARDSVWYTGSYGLIYWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS | SVVTQPASVSGSPGQSITISCTGTSSDVGSYNLVSWFQQHPGKAPKLMIYEVTKRPSGISNRFSGSKSGNTASLTISRLQAEDEADYYCCSYAGSSTVVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC | 21.252216 | 24.14118 | 223 | 214 | 223 | 214 | 223 | 214 | 101 | ba.4/5-5 fab heavy chain | ba.4/5-5 fab light chain | homo sapiens | homo sapiens | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 33 | 15 | 0.88 | HL | train |
8id3_S | 8id3 | cryo-em structure of the 9-hydroxystearic acid bound gpr120-gi complex | no | membrane protein | 2023-02-12 | 2023-03-15 | electron microscopy | 3.1 | N.A. | N.A. | 36862765 | 10.1126/science.add6220 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFAVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLE | N.A. | 17.444391 | 0 | 285 | 0 | 229 | 0 | 246 | 0 | 0 | scfv16 | N.A. | homo sapiens | N.A. | B;A | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(i) subunit alpha-1 | homo sapiens;homo sapiens | 24;32 | 10;19 | 0.77;0.95 | H_only | train |
8id4_S | 8id4 | cryo-em structure of the linoleic acid bound gpr120-gi complex | no | membrane protein | 2023-02-12 | 2023-03-15 | electron microscopy | 3.1 | N.A. | N.A. | 36862765 | 10.1126/science.add6220 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFAVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.403353 | 0 | 285 | 0 | 230 | 0 | 247 | 0 | 0 | scfv16 | N.A. | homo sapiens | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 37;24 | 22;11 | 0.88;0.85 | H_only | train |
8id6_S | 8id6 | cryo-em structure of the oleic acid bound gpr120-gi complex | no | membrane protein | 2023-02-12 | 2023-03-15 | electron microscopy | 2.8 | N.A. | N.A. | 36862765 | 10.1126/science.add6220 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFAVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.43234 | 0 | 285 | 0 | 230 | 0 | 247 | 0 | 0 | scfv16 | N.A. | homo sapiens | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 36;21 | 21;8 | 0.88;0.8 | H_only | train |
8id8_S | 8id8 | cryo-em structure of the tug891 bound gpr120-gi complex | no | membrane protein | 2023-02-12 | 2023-03-15 | electron microscopy | 3 | N.A. | N.A. | 36862765 | 10.1126/science.add6220 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFAVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKL | N.A. | 17.344284 | 0 | 285 | 0 | 228 | 0 | 245 | 0 | 0 | scfv16 | N.A. | homo sapiens | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 33;26 | 20;12 | 0.91;0.8 | H_only | train |
8id9_S | 8id9 | cryo-em structure of the eicosapentaenoic acid bound gpr120-gi complex | no | membrane protein | 2023-02-12 | 2023-03-15 | electron microscopy | 3 | N.A. | N.A. | 36862765 | 10.1126/science.add6220 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFAVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKL | N.A. | 17.307951 | 0 | 285 | 0 | 227 | 0 | 245 | 0 | 0 | scfv16 | N.A. | homo sapiens | N.A. | B;A | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(i) subunit alpha-1 | homo sapiens;homo sapiens | 24;31 | 9;19 | 0.82;0.95 | H_only | train |
8idn_H_L | 8idn | cryo-em structure of rbd/e77-fab complex | no | viral protein/immune system | 2023-02-13 | 2023-06-21 | electron microscopy | 3.35 | N.A. | N.A. | 37428848 | 10.1107/S2059798323005041 | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV7 | H | L | MGWSCIILFLVATATGVHSQVQLKESGPGLVAPSQSLSITCTVSGLSLIGYGVNWVRQPPGKGLEWLGMIWGDGSTDYNSTLKSRLSISKDNSKSQIFLKMNSLQTIDDARYYCVRDDDYDGQFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | MGWSCIILFLVATATGVHSQAVVTQESALTTSPGETVTLTCRSSTGAVTISNYVNWVQEKPDHLFTGLIGATNSRAPGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWYSNHWVFGGGTKLTVLGQPKSTPSLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWKANGTPITQGVDTSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKSLSPAECL | VQLKESGPGLVAPSQSLSITCTVSGLSLIGYGVNWVRQPPGKGLEWLGMIWGDGSTDYNSTLKSRLSISKDNSKSQIFLKMNSLQTIDDARYYCVRDDDYDGQFAYWGQGTLVTVS | AVVTQESALTTSPGETVTLTCRSSTGAVTISNYVNWVQEKPDHLFTGLIGATNSRAPGVPARFSGSLIGDKAALTITGAQTEDEAIYFCALWYSNHWVFGGGTKLTVL | 13.832501 | 13.505302 | 239 | 233 | 116 | 108 | 116 | 108 | 48 | e77 fab heavy chain | e77 fab light chain | mus musculus | mus musculus | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 52 | 16 | 0.67 | HL | train |
8g5f_J_K | 8g5f | native gaba-a receptor from the mouse brain, ortho-alpha1-alpha3-beta2-gamma2 subtype, in complex with gaba and allopregnanolone | no | membrane protein | 2023-02-13 | 2023-09-20 | electron microscopy | 2.64 | N.A. | N.A. | 37730991 | 10.1038/s41586-023-06556-w | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | J | K | EIQLQQSGPELVKPGTSVKVSCKASGYSFTDYNMYWVKQSHGKSLEWIGYIDPYNADTTYNREFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYCARKRNNFYFDYWGQGTPLTVSSAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKSAALEVLFQ | YIVMTQSPKSMSMSLGERVTLSCRASEYVGSYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFAGSGSATDFTLTITSVQAEDLADYHCGQTYNYPTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EIQLQQSGPELVKPGTSVKVSCKASGYSFTDYNMYWVKQSHGKSLEWIGYIDPYNADTTYNREFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYCARKRNNFYFDYWGQGTPLTVS | YIVMTQSPKSMSMSLGERVTLSCRASEYVGSYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFAGSGSATDFTLTITSVQAEDLADYHCGQTYNYPTFGGGTKLEI | 13.819708 | 13.198693 | 223 | 213 | 117 | 105 | 117 | 105 | 43 | heavy chain of 8e3 fab | light chain of 8e3 fab | mus musculus | mus musculus | C | protein | gamma-aminobutyric acid receptor subunit alpha-1 | mus musculus | 40 | 16 | 0.8 | HL | train |
8g5g_H_L | 8g5g | native gaba-a receptor from the mouse brain, meta-alpha1-alpha3-beta2-gamma2 subtype, in complex with gaba, zolpidem, and endogenous neurosteroid | no | membrane protein | 2023-02-13 | 2023-09-20 | electron microscopy | 2.94 | N.A. | N.A. | 37730991 | 10.1038/s41586-023-06556-w | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | H | L | EIQLQQSGPELVKPGTSVKVSCKASGYSFTDYNMYWVKQSHGKSLEWIGYIDPYNADTTYNREFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYCARKRNNFYFDYWGQGTPLTVSSAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKSAALEVLFQ | YIVMTQSPKSMSMSLGERVTLSCRASEYVGSYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFAGSGSATDFTLTITSVQAEDLADYHCGQTYNYPTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EIQLQQSGPELVKPGTSVKVSCKASGYSFTDYNMYWVKQSHGKSLEWIGYIDPYNADTTYNREFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYCARKRNNFYFDYWGQGTPLTVS | YIVMTQSPKSMSMSLGERVTLSCRASEYVGSYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFAGSGSATDFTLTITSVQAEDLADYHCGQTYNYPTFGGGTKLEI | 13.771589 | 13.150483 | 223 | 213 | 117 | 105 | 117 | 105 | 46 | heavy chain of 8e3 fab | light chain of 8e3 fab | mus musculus | mus musculus | A | protein | gamma-aminobutyric acid receptor subunit alpha-1 | mus musculus | 35 | 15 | 0.83 | HL | train |
8g5h_J_K | 8g5h | native gaba-a receptor from the mouse brain, ortho-alpha1-alpha3-beta2-gamma2 subtype, in complex with gaba, zolpidem, and endogenous neurosteroid | no | membrane protein | 2023-02-13 | 2023-09-20 | electron microscopy | 2.89 | N.A. | N.A. | 37730991 | 10.1038/s41586-023-06556-w | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | J | K | EIQLQQSGPELVKPGTSVKVSCKASGYSFTDYNMYWVKQSHGKSLEWIGYIDPYNADTTYNREFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYCARKRNNFYFDYWGQGTPLTVSSAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKSAALEVLFQ | YIVMTQSPKSMSMSLGERVTLSCRASEYVGSYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFAGSGSATDFTLTITSVQAEDLADYHCGQTYNYPTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EIQLQQSGPELVKPGTSVKVSCKASGYSFTDYNMYWVKQSHGKSLEWIGYIDPYNADTTYNREFKGKATLTVDKSSSTAFMHLNSLTSEDSAVYYCARKRNNFYFDYWGQGTPLTVS | YIVMTQSPKSMSMSLGERVTLSCRASEYVGSYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFAGSGSATDFTLTITSVQAEDLADYHCGQTYNYPTFGGGTKLEI | 13.840604 | 13.202225 | 223 | 213 | 117 | 105 | 117 | 105 | 45 | heavy chain of 8e3 fab | light chain of 8e3 fab | mus musculus | mus musculus | C | protein | gamma-aminobutyric acid receptor subunit alpha-1 | mus musculus | 40 | 16 | 0.76 | HL | train |
8idi_C | 8idi | crystal structure of nanobody vhh-t71 with mers-cov rbd | no | viral protein | 2023-02-13 | 2024-02-28 | x-ray diffraction | 1.9 | 0.207 | 0.173 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | SQVQLQESGGGSVQAGGSLTLSCTFSSEYTFTHNAVGWFRQAPGKEREGVAAINGGGGSTYYADSVKDRFTISRDNANTVASLIMKNLKPEDSGIYYCATDVRLIDWYSGDWSLARLYSTWGQGTQVTVSSHHHHHH | N.A. | SQVQLQESGGGSVQAGGSLTLSCTFSSEYTFTHNAVGWFRQAPGKEREGVAAINGGGGSTYYADSVKDRFTISRDNANTVASLIMKNLKPEDSGIYYCATDVRLIDWYSGDWSLARLYSTWGQGTQVTVSS | N.A. | 13.860701 | 0 | 137 | 0 | 131 | 0 | 131 | 0 | 0 | vhh-t71 | N.A. | camelus dromedarius | N.A. | B | protein | spike protein s1 | middle east respiratory syndrome-related coronavirus | 34 | 16 | 1 | H_only | train |
8idi_A | 8idi | crystal structure of nanobody vhh-t71 with mers-cov rbd | no | viral protein | 2023-02-13 | 2024-02-28 | x-ray diffraction | 1.9 | 0.207 | 0.173 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | A | N.A. | SQVQLQESGGGSVQAGGSLTLSCTFSSEYTFTHNAVGWFRQAPGKEREGVAAINGGGGSTYYADSVKDRFTISRDNANTVASLIMKNLKPEDSGIYYCATDVRLIDWYSGDWSLARLYSTWGQGTQVTVSSHHHHHH | N.A. | VQLQESGGGSVQAGGSLTLSCTFSSEYTFTHNAVGWFRQAPGKEREGVAAINGGGGSTYYADSVKDRFTISRDNANTVASLIMKNLKPEDSGIYYCATDVRLIDWYSGDWSLARLYSTWGQGTQVTVSS | N.A. | 13.745534 | 0 | 137 | 0 | 129 | 0 | 129 | 0 | 0 | vhh-t71 | N.A. | camelus dromedarius | N.A. | D | protein | spike protein s1 | middle east respiratory syndrome-related coronavirus | 33 | 15 | 1 | H_only | train |
8idm_A | 8idm | crystal structure of nanobody vhh-227 with nanobody vhh-t71 and mers-cov rbd | no | viral protein | 2023-02-13 | 2024-02-28 | x-ray diffraction | 3.59 | 0.273 | 0.253 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | A | N.A. | QVQLQESGGGSVQAGGSLTLSCTFSSEYTFTHNAVGWFRQAPGKEREGVAAINGGGGSTYYADSVKDRFTISRDNANTVASLIMKNLKPEDSGIYYCATDVRLIDWYSGDWSLARLYSTWGQGTQVTVSSHHHHHH | N.A. | VQLQESGGGSVQAGGSLTLSCTFSSEYTFTHNAVGWFRQAPGKEREGVAAINGGGGSTYYADSVKDRFTISRDNANTVASLIMKNLKPEDSGIYYCATDVRLIDWYSGDWSLARLYSTWGQGTQVTVSS | N.A. | 13.87198 | 0 | 136 | 0 | 129 | 0 | 129 | 0 | 0 | vhh-t71 | N.A. | camelus dromedarius | N.A. | D | protein | spike protein s1 | middle east respiratory syndrome-related coronavirus | 33 | 15 | 1 | H_only | train |
8idm_B | 8idm | crystal structure of nanobody vhh-227 with nanobody vhh-t71 and mers-cov rbd | no | viral protein | 2023-02-13 | 2024-02-28 | x-ray diffraction | 3.59 | 0.273 | 0.253 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | QVQLQESGGGSVQAGGSLRLSCSGYTYSSNCVVWFRQTPGKEREVVASIYTGDNSTYYADSVKGRFTISLDNGKKTLYLQMDSLEAEDTARYYCAAGAATTQTMVACGRTPGPYELKYWGQGTQVTVSSHHHHHH | N.A. | QVQLQESGGGSVQAGGSLRLSCSGYTYSSNCVVWFRQTPGKEREVVASIYTGDNSTYYADSVKGRFTISLDNGKKTLYLQMDSLEAEDTARYYCAAGAATTQTMVACGRTPGPYELKYWGQGTQVTVSS | N.A. | 13.775888 | 0 | 135 | 0 | 129 | 0 | 129 | 0 | 0 | vhh-227 | N.A. | camelus dromedarius | N.A. | D | protein | spike protein s1 | middle east respiratory syndrome-related coronavirus | 33 | 15 | 0.94 | H_only | train |
8g6i_C_B | 8g6i | coagulation factor viii bound to a patient-derived anti-c1 domain antibody inhibitor | no | blood clotting | 2023-02-15 | 2023-05-24 | electron microscopy | 4.23 | N.A. | N.A. | 37192299 | 10.1182/blood.2023020181 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | C | B | EVQLVESGGGVVQPGRSLRLSCVDSGLTFSSYGMHWVRQAPGAGLEWVAVISYDGNDKYYADSVKGRFAISRDNAKNTLYLQMNSLTIEDTAVYYCAKDLIESNIAEAFWGQGTLVTVSSKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTATYTCNVDHKPSNTKVDKRV | DIQMTQSPSSLSASVGDTVTIACRASRDIRNDLAWYQQKPGKAPKLLIYATSRLQSGVPSRFSGSGSFTDFTLTINSLQPDDSATYYCLQDSDYPLTFGGGTKVDIKGTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | EVQLVESGGGVVQPGRSLRLSCVDSGLTFSSYGMHWVRQAPGAGLEWVAVISYDGNDKYYADSVKGRFAISRDNAKNTLYLQMNSLTIEDTAVYYCAKDLIESNIAEAFWGQGTLVTVSSKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTATYTCNVDHKPSNTKVDKRV | DIQMTQSPSSLSASVGDTVTIACRASRDIRNDLAWYQQKPGKAPKLLIYATSRLQSGVPSRFSGSGSFTDFTLTINSLQPDDSATYYCLQDSDYPLTFGGGTKVDIKGTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 23.326252 | 24.053036 | 215 | 211 | 215 | 211 | 215 | 211 | 97 | nb33 heavy chain | nb33 light chain | homo sapiens | homo sapiens | A | protein | coagulation factor viii chimera from human and pig | sus scrofa | 21 | 7 | 0.58 | HL | train |
8iec_N | 8iec | cryo-em structure of minigo-scfv16 of gpr156-minigo-scfv16 complex (local refine) | no | signaling protein | 2023-02-15 | 2024-02-14 | electron microscopy | 3.18 | N.A. | N.A. | 38332368 | 10.1038/s41594-024-01224-7 | 0 | auth_asym_id | scFv | N.A. | N.A. | N | N.A. | DPDVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLTSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVIPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAHHHHHHHH | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLTSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVIPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.43515 | 0 | 261 | 0 | 230 | 0 | 246 | 0 | 0 | single-chain variable fragment scfv16 | N.A. | mus musculus | N.A. | C;D | protein;protein | guanine nucleotide-binding protein g(o) subunit alpha;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 35;26 | 21;11 | 0.91;0.79 | H_only | train |
8ied_N | 8ied | cryo-em structure of gpr156-minigo-scfv16 complex | no | membrane protein | 2023-02-15 | 2024-02-14 | electron microscopy | 3.33 | N.A. | N.A. | 38332368 | 10.1038/s41594-024-01224-7 | 0 | auth_asym_id | scFv | N.A. | N.A. | N | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLTSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVIPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAHHHHHHHH | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLTSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVIPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.43515 | 0 | 259 | 0 | 230 | 0 | 246 | 0 | 0 | single-chain variable fragment scfv16 | N.A. | mus musculus | N.A. | C;D | protein;protein | guanine nucleotide-binding protein g(o) subunit alpha;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 35;26 | 21;11 | 0.91;0.79 | H_only | train |
8iee_C | 8iee | crystal structure of nanobody vhh-31 with mers-cov rbd | no | viral protein | 2023-02-15 | 2024-02-28 | x-ray diffraction | 3.21 | 0.252 | 0.243 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | QVQLQESGGGSVQTGGSLRLSCAGSGYTDNSCSMGWYRQAPGRERELIGTIISDGTTYYSDAVKGRFTISLDNAKNTVYLQMNNLKPEDTAMYICNTGWSQGSLVNRTTGWTRDCWSFGIWGQGTQVTVSS | N.A. | QVQLQESGGGSVQTGGSLRLSCAGSGYTDNSCSMGWYRQAPGRERELIGTIISDGTTYYSDAVKGRFTISLDNAKNTVYLQMNNLKPEDTAMYICNTGWSQGSLVNRTTGWTRDCWSFGIWGQGTQVTVSS | N.A. | 14.930305 | 0 | 131 | 0 | 131 | 0 | 131 | 0 | 0 | vhh-31 | N.A. | camelus dromedarius | N.A. | A;B | protein;protein | spike protein s1;spike protein s1 | middle east respiratory syndrome-related coronavirus;middle east respiratory syndrome-related coronavirus | 46;26 | 11;13 | 0.55;1.0 | H_only | train |
8iee_D | 8iee | crystal structure of nanobody vhh-31 with mers-cov rbd | no | viral protein | 2023-02-15 | 2024-02-28 | x-ray diffraction | 3.21 | 0.252 | 0.243 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | QVQLQESGGGSVQTGGSLRLSCAGSGYTDNSCSMGWYRQAPGRERELIGTIISDGTTYYSDAVKGRFTISLDNAKNTVYLQMNNLKPEDTAMYICNTGWSQGSLVNRTTGWTRDCWSFGIWGQGTQVTVSS | N.A. | QVQLQESGGGSVQTGGSLRLSCAGSGYTDNSCSMGWYRQAPGRERELIGTIISDGTTYYSDAVKGRFTISLDNAKNTVYLQMNNLKPEDTAMYICNTGWSQGSLVNRTTGWTRDCWSFGIWGQGTQVTVSS | N.A. | 14.87355 | 0 | 131 | 0 | 131 | 0 | 131 | 0 | 0 | vhh-31 | N.A. | camelus dromedarius | N.A. | A;B | protein;protein | spike protein s1;spike protein s1 | middle east respiratory syndrome-related coronavirus;middle east respiratory syndrome-related coronavirus | 28;45 | 15;12 | 1.0;0.57 | H_only | train |
8g72_A | 8g72 | sars-cov-2 spike/nb2 complex with 1 rbd up (local refinement at 5.6 a) | no | viral protein/immune system | 2023-02-16 | 2024-01-24 | electron microscopy | 5.6 | N.A. | N.A. | 37855638 | 10.1128/jvi.01448-23 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | A | N.A. | MAQVQLQESGGGAVQPGGSLGLSCTASGFNFETSTVGWFRQAPGKENEGVSCINKGYEDTNYADSVKGRFTISRDAAKNTVYLQMDSLQPEDTATYYCAAHNEPYFCDYSGRFRWNEYSYYGQGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | QVQLQESGGGAVQPGGSLGLSCTASGFNFETSTVGWFRQAPGKENEGVSCINKGYEDTNYADSVKGRFTISRDAAKNTVYLQMDSLQPEDTATYYCAAHNEPYFCDYSGRFRWNEYSYYGQGTQVTVS | N.A. | 13.696872 | 0 | 152 | 0 | 128 | 0 | 128 | 0 | 0 | nanosota-2 | N.A. | vicugna pacos | N.A. | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 18 | 7 | 0.88 | H_only | train |
8g73_C | 8g73 | sars-cov-2 spike/nb3 complex with 2 rbds up and 3 nb3 bound at 2.5 a | no | viral protein/immune system | 2023-02-16 | 2024-01-24 | electron microscopy | 2.5 | N.A. | N.A. | 37855638 | 10.1128/jvi.01448-23 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | MAQVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREMVAVISSIASTQYANFVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREMVAVISSIASTQYANFVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSS | N.A. | 13.865668 | 0 | 138 | 0 | 115 | 0 | 115 | 0 | 0 | nanosota-3 | N.A. | vicugna pacos | N.A. | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 38 | 7 | 0.37 | H_only | train |
8g73_E | 8g73 | sars-cov-2 spike/nb3 complex with 2 rbds up and 3 nb3 bound at 2.5 a | no | viral protein/immune system | 2023-02-16 | 2024-01-24 | electron microscopy | 2.5 | N.A. | N.A. | 37855638 | 10.1128/jvi.01448-23 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | E | N.A. | MAQVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREMVAVISSIASTQYANFVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREMVAVISSIASTQYANFVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSS | N.A. | 13.898772 | 0 | 138 | 0 | 115 | 0 | 115 | 0 | 0 | nanosota-3 | N.A. | vicugna pacos | N.A. | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 14 | 6 | 0.86 | H_only | train |
8g73_F | 8g73 | sars-cov-2 spike/nb3 complex with 2 rbds up and 3 nb3 bound at 2.5 a | no | viral protein/immune system | 2023-02-16 | 2024-01-24 | electron microscopy | 2.5 | N.A. | N.A. | 37855638 | 10.1128/jvi.01448-23 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | MAQVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREMVAVISSIASTQYANFVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREMVAVISSIASTQYANFVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSS | N.A. | 13.83038 | 0 | 138 | 0 | 115 | 0 | 115 | 0 | 0 | nanosota-3 | N.A. | vicugna pacos | N.A. | D | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 37 | 7 | 0.37 | H_only | train |
8g74_E | 8g74 | sars-cov-2 spike/nb3 complex with 1 rbd up and 2 nb3 | no | viral protein/immune system | 2023-02-16 | 2024-01-24 | electron microscopy | 2.5 | N.A. | N.A. | 37855638 | 10.1128/jvi.01448-23 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | E | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREMVAVISSIASTQYANFVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREMVAVISSIASTQYANFVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSS | N.A. | 13.914542 | 0 | 136 | 0 | 115 | 0 | 115 | 0 | 0 | nanosota-3 | N.A. | vicugna pacos | N.A. | A;B | protein;protein | spike glycoprotein;spike glycoprotein | severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2 | 43;14 | 8;7 | 0.36;1.0 | H_only | train |
8g74_C | 8g74 | sars-cov-2 spike/nb3 complex with 1 rbd up and 2 nb3 | no | viral protein/immune system | 2023-02-16 | 2024-01-24 | electron microscopy | 2.5 | N.A. | N.A. | 37855638 | 10.1128/jvi.01448-23 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREMVAVISSIASTQYANFVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREMVAVISSIASTQYANFVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSS | N.A. | 13.857736 | 0 | 136 | 0 | 115 | 0 | 115 | 0 | 0 | nanosota-3 | N.A. | vicugna pacos | N.A. | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 49 | 11 | 0.48 | H_only | train |
8g75_E | 8g75 | sars-cov-2 spike/nb4 complex with 2 rbds up and 3 nb4 bound | no | viral protein/immune system | 2023-02-16 | 2024-01-24 | electron microscopy | 3.4 | N.A. | N.A. | 37855638 | 10.1128/jvi.01448-23 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | E | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTLDYYAIGWFRQAPGKEREGVSCISSSGGRTNYADSVKGRFTISRDNTKNTVYLQMNSLKPEDTAVYYCAAWEASRWYCPLQFSADFSSWGQGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTLDYYAIGWFRQAPGKEREGVSCISSSGGRTNYADSVKGRFTISRDNTKNTVYLQMNSLKPEDTAVYYCAAWEASRWYCPLQFSADFSSWGQGTQVTVSS | N.A. | 14.098171 | 0 | 148 | 0 | 127 | 0 | 127 | 0 | 0 | nanosota-4 | N.A. | vicugna pacos | N.A. | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 25 | 10 | 0.77 | H_only | train |
8g75_F | 8g75 | sars-cov-2 spike/nb4 complex with 2 rbds up and 3 nb4 bound | no | viral protein/immune system | 2023-02-16 | 2024-01-24 | electron microscopy | 3.4 | N.A. | N.A. | 37855638 | 10.1128/jvi.01448-23 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTLDYYAIGWFRQAPGKEREGVSCISSSGGRTNYADSVKGRFTISRDNTKNTVYLQMNSLKPEDTAVYYCAAWEASRWYCPLQFSADFSSWGQGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTLDYYAIGWFRQAPGKEREGVSCISSSGGRTNYADSVKGRFTISRDNTKNTVYLQMNSLKPEDTAVYYCAAWEASRWYCPLQFSADFSSWGQGTQVTVSS | N.A. | 14.064042 | 0 | 148 | 0 | 127 | 0 | 127 | 0 | 0 | nanosota-4 | N.A. | vicugna pacos | N.A. | A;B | protein;protein | spike glycoprotein;spike glycoprotein | severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2 | 31;32 | 11;10 | 0.61;0.71 | H_only | train |
8g75_G | 8g75 | sars-cov-2 spike/nb4 complex with 2 rbds up and 3 nb4 bound | no | viral protein/immune system | 2023-02-16 | 2024-01-24 | electron microscopy | 3.4 | N.A. | N.A. | 37855638 | 10.1128/jvi.01448-23 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | G | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTLDYYAIGWFRQAPGKEREGVSCISSSGGRTNYADSVKGRFTISRDNTKNTVYLQMNSLKPEDTAVYYCAAWEASRWYCPLQFSADFSSWGQGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTLDYYAIGWFRQAPGKEREGVSCISSSGGRTNYADSVKGRFTISRDNTKNTVYLQMNSLKPEDTAVYYCAAWEASRWYCPLQFSADFSSWGQGTQVTVSS | N.A. | 14.074151 | 0 | 148 | 0 | 127 | 0 | 127 | 0 | 0 | nanosota-4 | N.A. | vicugna pacos | N.A. | D | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 30 | 10 | 0.77 | H_only | train |
8g76_E | 8g76 | sars-cov-2 spike/nb5 complex | no | viral protein/immune system | 2023-02-16 | 2024-02-21 | electron microscopy | 3.8 | N.A. | N.A. | 39236072 | 10.1371/journal.ppat.1012493 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | E | N.A. | MAQVQLQESGGGLVQAGGSLRLSCAASESIFRMELMEWYHQAPGKQRELVATINRCGSTNYSDSVKGRFIISSDNAKNSVYLQMNSLKDEDTAVYSCHARTWTSYWGRGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | QVQLQESGGGLVQAGGSLRLSCAASESIFRMELMEWYHQAPGKQRELVATINRCGSTNYSDSVKGRFIISSDNAKNSVYLQMNSLKDEDTAVYSCHARTWTSYWGRGTQVTVSS | N.A. | 13.67529 | 0 | 137 | 0 | 114 | 0 | 114 | 0 | 0 | nanosota-5 | N.A. | vicugna pacos | N.A. | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 41 | 12 | 0.71 | H_only | train |
8g76_H | 8g76 | sars-cov-2 spike/nb5 complex | no | viral protein/immune system | 2023-02-16 | 2024-02-21 | electron microscopy | 3.8 | N.A. | N.A. | 39236072 | 10.1371/journal.ppat.1012493 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | H | N.A. | MAQVQLQESGGGLVQAGGSLRLSCAASESIFRMELMEWYHQAPGKQRELVATINRCGSTNYSDSVKGRFIISSDNAKNSVYLQMNSLKDEDTAVYSCHARTWTSYWGRGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | QVQLQESGGGLVQAGGSLRLSCAASESIFRMELMEWYHQAPGKQRELVATINRCGSTNYSDSVKGRFIISSDNAKNSVYLQMNSLKDEDTAVYSCHARTWTSYWGRGTQVTVSS | N.A. | 13.764563 | 0 | 137 | 0 | 114 | 0 | 114 | 0 | 0 | nanosota-5 | N.A. | vicugna pacos | N.A. | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 45 | 12 | 0.71 | H_only | train |
8g76_I | 8g76 | sars-cov-2 spike/nb5 complex | no | viral protein/immune system | 2023-02-16 | 2024-02-21 | electron microscopy | 3.8 | N.A. | N.A. | 39236072 | 10.1371/journal.ppat.1012493 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | I | N.A. | MAQVQLQESGGGLVQAGGSLRLSCAASESIFRMELMEWYHQAPGKQRELVATINRCGSTNYSDSVKGRFIISSDNAKNSVYLQMNSLKDEDTAVYSCHARTWTSYWGRGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | QVQLQESGGGLVQAGGSLRLSCAASESIFRMELMEWYHQAPGKQRELVATINRCGSTNYSDSVKGRFIISSDNAKNSVYLQMNSLKDEDTAVYSCHARTWTSYWGRGTQVTVSS | N.A. | 13.713166 | 0 | 137 | 0 | 114 | 0 | 114 | 0 | 0 | nanosota-5 | N.A. | vicugna pacos | N.A. | D | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 37 | 10 | 0.67 | H_only | train |
8g78_E | 8g78 | local refinement of sars-cov-2 spike/nanobody mixture complex around ntd | no | viral protein/immune system | 2023-02-16 | 2024-02-21 | electron microscopy | 3.4 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | E | N.A. | QVQLQESGGGLVQPGGSLRLSCVASGSVTFNSMGWYRQAPGKQRELVAQITAGGDTHYADSVKGRFTISEHRGKNAVYLEMHSLKPEDTAVYYCHLQVPFLGGGYDYWGQGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | VQLQESGGGLVQPGGSLRLSCVASGSVTFNSMGWYRQAPGKQRELVAQITAGGDTHYADSVKGRFTISEHRGKNAVYLEMHSLKPEDTAVYYCHLQVPFLGGGYDYWGQGTQVTVSSG | N.A. | 13.955417 | 0 | 139 | 0 | 118 | 0 | 118 | 0 | 0 | nanosota-6 | N.A. | vicugna pacos | N.A. | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 37 | 12 | 0.75 | H_only | train |
8g78_J | 8g78 | local refinement of sars-cov-2 spike/nanobody mixture complex around ntd | no | viral protein/immune system | 2023-02-16 | 2024-02-21 | electron microscopy | 3.4 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | J | N.A. | QVQLQESGGGLVQAGGSLRLSCAASESIFRMELMEWYHQAPGKQRELVATINRCGSTNYSDSVKGRFIISSDNAKNSVYLQMNSLKDEDTAVYSCHARTWTSYWGRGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | VQLQESGGGLVQAGGSLRLSCAASESIFRMELMEWYHQAPGKQRELVATINRCGSTNYSDSVKGRFIISSDNAKNSVYLQMNSLKDEDTAVYSCHARTWTSYWGRGTQVTVSS | N.A. | 13.71387 | 0 | 135 | 0 | 113 | 0 | 113 | 0 | 0 | nanosota-5 | N.A. | vicugna pacos | N.A. | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 46 | 12 | 0.71 | H_only | train |
8g78_G | 8g78 | local refinement of sars-cov-2 spike/nanobody mixture complex around ntd | no | viral protein/immune system | 2023-02-16 | 2024-02-21 | electron microscopy | 3.4 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | G | N.A. | QVQLQESGGGLVQPGGSLRLSCVASGSVTFNSMGWYRQAPGKQRELVAQITAGGDTHYADSVKGRFTISEHRGKNAVYLEMHSLKPEDTAVYYCHLQVPFLGGGYDYWGQGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | VQLQESGGGLVQPGGSLRLSCVASGSVTFNSMGWYRQAPGKQRELVAQITAGGDTHYADSVKGRFTISEHRGKNAVYLEMHSLKPEDTAVYYCHLQVPFLGGGYDYWGQGTQVTVSSG | N.A. | 13.826827 | 0 | 139 | 0 | 118 | 0 | 118 | 0 | 0 | nanosota-6 | N.A. | vicugna pacos | N.A. | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 36 | 10 | 0.67 | H_only | train |
8g78_H | 8g78 | local refinement of sars-cov-2 spike/nanobody mixture complex around ntd | no | viral protein/immune system | 2023-02-16 | 2024-02-21 | electron microscopy | 3.4 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | H | N.A. | QVQLQESGGGLVQAGGSLRLSCAASESIFRMELMEWYHQAPGKQRELVATINRCGSTNYSDSVKGRFIISSDNAKNSVYLQMNSLKDEDTAVYSCHARTWTSYWGRGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | VQLQESGGGLVQAGGSLRLSCAASESIFRMELMEWYHQAPGKQRELVATINRCGSTNYSDSVKGRFIISSDNAKNSVYLQMNSLKDEDTAVYSCHARTWTSYWGRGTQVTVSS | N.A. | 13.720042 | 0 | 135 | 0 | 113 | 0 | 113 | 0 | 0 | nanosota-5 | N.A. | vicugna pacos | N.A. | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 46 | 13 | 0.72 | H_only | train |
8g78_F | 8g78 | local refinement of sars-cov-2 spike/nanobody mixture complex around ntd | no | viral protein/immune system | 2023-02-16 | 2024-02-21 | electron microscopy | 3.4 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | QVQLQESGGGLVQPGGSLRLSCVASGSVTFNSMGWYRQAPGKQRELVAQITAGGDTHYADSVKGRFTISEHRGKNAVYLEMHSLKPEDTAVYYCHLQVPFLGGGYDYWGQGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | VQLQESGGGLVQPGGSLRLSCVASGSVTFNSMGWYRQAPGKQRELVAQITAGGDTHYADSVKGRFTISEHRGKNAVYLEMHSLKPEDTAVYYCHLQVPFLGGGYDYWGQGTQVTVSSG | N.A. | 13.868255 | 0 | 139 | 0 | 118 | 0 | 118 | 0 | 0 | nanosota-6 | N.A. | vicugna pacos | N.A. | D | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 36 | 10 | 0.67 | H_only | train |
8g78_I | 8g78 | local refinement of sars-cov-2 spike/nanobody mixture complex around ntd | no | viral protein/immune system | 2023-02-16 | 2024-02-21 | electron microscopy | 3.4 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | I | N.A. | QVQLQESGGGLVQAGGSLRLSCAASESIFRMELMEWYHQAPGKQRELVATINRCGSTNYSDSVKGRFIISSDNAKNSVYLQMNSLKDEDTAVYSCHARTWTSYWGRGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | VQLQESGGGLVQAGGSLRLSCAASESIFRMELMEWYHQAPGKQRELVATINRCGSTNYSDSVKGRFIISSDNAKNSVYLQMNSLKDEDTAVYSCHARTWTSYWGRGTQVTVSS | N.A. | 13.719763 | 0 | 135 | 0 | 113 | 0 | 113 | 0 | 0 | nanosota-5 | N.A. | vicugna pacos | N.A. | D | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 48 | 13 | 0.72 | H_only | train |
8g79_O | 8g79 | local refinement of sars-cov-2 spike/nanobody mixture complex around rbd | no | viral protein/immune system | 2023-02-16 | 2024-02-21 | electron microscopy | 6.1 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | O | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREMVAVISSIASTQYANFVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREMVAVISSIASTQYANFVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSS | N.A. | 13.885464 | 0 | 136 | 0 | 115 | 0 | 115 | 0 | 0 | nanosota-3 | N.A. | vicugna pacos | N.A. | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 53 | 8 | 0.31 | H_only | train |
8g79_M | 8g79 | local refinement of sars-cov-2 spike/nanobody mixture complex around rbd | no | viral protein/immune system | 2023-02-16 | 2024-02-21 | electron microscopy | 6.1 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | M | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREMVAVISSIASTQYANFVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREMVAVISSIASTQYANFVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSS | N.A. | 13.7721 | 0 | 136 | 0 | 115 | 0 | 115 | 0 | 0 | nanosota-3 | N.A. | vicugna pacos | N.A. | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 52 | 9 | 0.36 | H_only | train |
8g79_N | 8g79 | local refinement of sars-cov-2 spike/nanobody mixture complex around rbd | no | viral protein/immune system | 2023-02-16 | 2024-02-21 | electron microscopy | 6.1 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTLDYYAIGWFRQAPGKEREGVSCISSSGGRTNYADSVKGRFTISRDNTKNTVYLQMNSLKPEDTAVYYCAAWEASRWYCPLQFSADFSSWGQGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTLDYYAIGWFRQAPGKEREGVSCISSSGGRTNYADSVKGRFTISRDNTKNTVYLQMNSLKPEDTAVYYCAAWEASRWYCPLQFSADFSSWGQGTQVTVSS | N.A. | 14.000595 | 0 | 148 | 0 | 127 | 0 | 127 | 0 | 0 | nanosota-4 | N.A. | vicugna pacos | N.A. | D | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 18 | 7 | 1 | H_only | train |
8g7a_E | 8g7a | sars-cov-2 spike/nb3 complex with 2 rbds up and 3 nb3 (local refinement) | no | viral protein/immune system | 2023-02-16 | 2024-02-21 | electron microscopy | 3.3 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | E | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREMVAVISSIASTQYANFVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREMVAVISSIASTQYANFVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSS | N.A. | 13.843884 | 0 | 136 | 0 | 115 | 0 | 115 | 0 | 0 | nanosota-3 | N.A. | vicugna pacos | N.A. | A;B | protein;protein | spike glycoprotein;spike glycoprotein | severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2 | 43;13 | 8;6 | 0.38;1.0 | H_only | train |
8g7a_C | 8g7a | sars-cov-2 spike/nb3 complex with 2 rbds up and 3 nb3 (local refinement) | no | viral protein/immune system | 2023-02-16 | 2024-02-21 | electron microscopy | 3.3 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREMVAVISSIASTQYANFVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREMVAVISSIASTQYANFVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSS | N.A. | 13.814574 | 0 | 136 | 0 | 115 | 0 | 115 | 0 | 0 | nanosota-3 | N.A. | vicugna pacos | N.A. | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 43 | 7 | 0.35 | H_only | train |
8g7a_F | 8g7a | sars-cov-2 spike/nb3 complex with 2 rbds up and 3 nb3 (local refinement) | no | viral protein/immune system | 2023-02-16 | 2024-02-21 | electron microscopy | 3.3 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREMVAVISSIASTQYANFVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREMVAVISSIASTQYANFVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSS | N.A. | 13.737444 | 0 | 136 | 0 | 115 | 0 | 115 | 0 | 0 | nanosota-3 | N.A. | vicugna pacos | N.A. | D | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 39 | 7 | 0.33 | H_only | train |
8g7b_E | 8g7b | sars-cov-2 spike/nb3 complex with 1 rbd up and 2 nb3 (local refinement) | no | viral protein/immune system | 2023-02-16 | 2024-02-21 | electron microscopy | 3.2 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | E | N.A. | MAQVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREMVAVISSIASTQYANFVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREMVAVISSIASTQYANFVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSS | N.A. | 13.842111 | 0 | 138 | 0 | 115 | 0 | 115 | 0 | 0 | nanosota-3 | N.A. | vicugna pacos | N.A. | A;B | protein;protein | spike glycoprotein;spike glycoprotein | severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2 | 53;18 | 8;7 | 0.3;0.78 | H_only | train |
8g7b_C | 8g7b | sars-cov-2 spike/nb3 complex with 1 rbd up and 2 nb3 (local refinement) | no | viral protein/immune system | 2023-02-16 | 2024-02-21 | electron microscopy | 3.2 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | MAQVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREMVAVISSIASTQYANFVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGSIFSPNTMGWFRQALGKQREMVAVISSIASTQYANFVKGRFTITRDNTKNTVHLQMNSLIPEDTAVYYCYAVDKSQDYWGQGTQVTVSS | N.A. | 13.761721 | 0 | 138 | 0 | 115 | 0 | 115 | 0 | 0 | nanosota-3 | N.A. | vicugna pacos | N.A. | B | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 41 | 7 | 0.37 | H_only | train |
8g7c_E | 8g7c | local refinement of sars-cov-2 spike/nb4 complex with 2 rbds up and 3 nb4 bound | no | viral protein/immune system | 2023-02-16 | 2024-02-21 | electron microscopy | 4.1 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | E | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTLDYYAIGWFRQAPGKEREGVSCISSSGGRTNYADSVKGRFTISRDNTKNTVYLQMNSLKPEDTAVYYCAAWEASRWYCPLQFSADFSSWGQGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTLDYYAIGWFRQAPGKEREGVSCISSSGGRTNYADSVKGRFTISRDNTKNTVYLQMNSLKPEDTAVYYCAAWEASRWYCPLQFSADFSSWGQGTQVTVSS | N.A. | 14.109852 | 0 | 148 | 0 | 127 | 0 | 127 | 0 | 0 | nanosota-4 | N.A. | vicugna pacos | N.A. | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 19 | 8 | 0.89 | H_only | train |
8g7c_G | 8g7c | local refinement of sars-cov-2 spike/nb4 complex with 2 rbds up and 3 nb4 bound | no | viral protein/immune system | 2023-02-16 | 2024-02-21 | electron microscopy | 4.1 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | G | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTLDYYAIGWFRQAPGKEREGVSCISSSGGRTNYADSVKGRFTISRDNTKNTVYLQMNSLKPEDTAVYYCAAWEASRWYCPLQFSADFSSWGQGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTLDYYAIGWFRQAPGKEREGVSCISSSGGRTNYADSVKGRFTISRDNTKNTVYLQMNSLKPEDTAVYYCAAWEASRWYCPLQFSADFSSWGQGTQVTVSS | N.A. | 14.105583 | 0 | 148 | 0 | 127 | 0 | 127 | 0 | 0 | nanosota-4 | N.A. | vicugna pacos | N.A. | D | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 34 | 13 | 0.87 | H_only | train |
8g7c_F | 8g7c | local refinement of sars-cov-2 spike/nb4 complex with 2 rbds up and 3 nb4 bound | no | viral protein/immune system | 2023-02-16 | 2024-02-21 | electron microscopy | 4.1 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTLDYYAIGWFRQAPGKEREGVSCISSSGGRTNYADSVKGRFTISRDNTKNTVYLQMNSLKPEDTAVYYCAAWEASRWYCPLQFSADFSSWGQGTQVTVSSGGQHHHHHHGAYPYDVPDYAS | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTLDYYAIGWFRQAPGKEREGVSCISSSGGRTNYADSVKGRFTISRDNTKNTVYLQMNSLKPEDTAVYYCAAWEASRWYCPLQFSADFSSWGQGTQVTVSS | N.A. | 14.123088 | 0 | 148 | 0 | 127 | 0 | 127 | 0 | 0 | nanosota-4 | N.A. | vicugna pacos | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
8g8a_A_B | 8g8a | crystal structure of dh1317.8 fab in complex with hiv proximal mper peptide | no | immune system | 2023-02-17 | 2024-05-22 | x-ray diffraction | 2.44 | 0.256 | 0.222 | 38761800 | 10.1016/j.cell.2024.04.033 | 0 | auth_asym_id | FabH:FabL | IGHV7 | IGKV1 | A | B | QVQLVQSGSELKKPGASVKVSCEASGYTFTDYAITWVRQAPGQGLEWMAWINTNTGNPTSAQGFTGRFVFSLGTSVNTTYLQIRSLRAEDTAVYYCARLRRGGYNNYYMDVWGTGSMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQMTQSPSSVSASVGDRVTITCRASQGISNWLAWYQQKPGKAPSLLIYGTSTLHRGVPSRFSGSGSGTDFTLTISSLHPEDVATYYCQQTNSFPPKWPFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGSELKKPGASVKVSCEASGYTFTDYAITWVRQAPGQGLEWMAWINTNTGNPTSAQGFTGRFVFSLGTSVNTTYLQIRSLRAEDTAVYYCARLRRGGYNNYYMDVWGTGSMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSVSASVGDRVTITCRASQGISNWLAWYQQKPGKAPSLLIYGTSTLHRGVPSRFSGSGSGTDFTLTISSLHPEDVATYYCQQTNSFPPKWPFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 20.819391 | 23.482355 | 225 | 216 | 218 | 215 | 223 | 215 | 105 | dh1317.8 heavy chain | dh1317.8 light chain | homo sapiens | homo sapiens | C | peptide | env polyprotein | human immunodeficiency virus 1 | 31 | 20 | 0.95 | HL | train |
8g8a_H_L | 8g8a | crystal structure of dh1317.8 fab in complex with hiv proximal mper peptide | no | immune system | 2023-02-17 | 2024-05-22 | x-ray diffraction | 2.44 | 0.256 | 0.222 | 38761800 | 10.1016/j.cell.2024.04.033 | 0 | auth_asym_id | FabH:FabL | IGHV7 | IGKV1 | H | L | QVQLVQSGSELKKPGASVKVSCEASGYTFTDYAITWVRQAPGQGLEWMAWINTNTGNPTSAQGFTGRFVFSLGTSVNTTYLQIRSLRAEDTAVYYCARLRRGGYNNYYMDVWGTGSMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQMTQSPSSVSASVGDRVTITCRASQGISNWLAWYQQKPGKAPSLLIYGTSTLHRGVPSRFSGSGSGTDFTLTISSLHPEDVATYYCQQTNSFPPKWPFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGSELKKPGASVKVSCEASGYTFTDYAITWVRQAPGQGLEWMAWINTNTGNPTSAQGFTGRFVFSLGTSVNTTYLQIRSLRAEDTAVYYCARLRRGGYNNYYMDVWGTGSMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQMTQSPSSVSASVGDRVTITCRASQGISNWLAWYQQKPGKAPSLLIYGTSTLHRGVPSRFSGSGSGTDFTLTISSLHPEDVATYYCQQTNSFPPKWPFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 21.167664 | 23.574968 | 225 | 216 | 223 | 216 | 225 | 216 | 115 | dh1317.8 heavy chain | dh1317.8 light chain | homo sapiens | homo sapiens | P | peptide | env polyprotein | human immunodeficiency virus 1 | 35 | 21 | 0.91 | HL | train |
8g8c_H_L | 8g8c | crystal structure of dh1322.1 fab in complex with hiv proximal mper peptide | no | immune system | 2023-02-17 | 2024-05-22 | x-ray diffraction | 2.08 | 0.229 | 0.199 | 38761800 | 10.1016/j.cell.2024.04.033 | 0 | auth_asym_id | FabH:FabL | IGHV7 | IGKV3 | H | L | QVQLVQSGSELKKPGASVNISCKASGYNFTSHALNWVRQAPGQGLDWLGWINTNTGNPTYAQGFTGRFVFSLDTSVGSAYLQISSLKAEDSAVYFCARVRFHGSGSFPQPADFYYYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERGTLSCRASQSVRGGYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSASGTDYTLTISRLEPEDFAVYYCQFYGGSPRALTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGSELKKPGASVNISCKASGYNFTSHALNWVRQAPGQGLDWLGWINTNTGNPTYAQGFTGRFVFSLDTSVGSAYLQISSLKAEDSAVYFCARVRFHGSGSFPQPADFYYYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | EIVLTQSPGTLSLSPGERGTLSCRASQSVRGGYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSASGTDYTLTISRLEPEDFAVYYCQFYGGSPRALTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 23.115839 | 22.811356 | 233 | 217 | 225 | 216 | 230 | 216 | 102 | dh1322.1 heavy chain | dh1322.1 light chain | homo sapiens | homo sapiens | C | peptide | env polyprotein | human immunodeficiency virus 1 | 41 | 25 | 0.89 | HL | train |
8g8c_A_B | 8g8c | crystal structure of dh1322.1 fab in complex with hiv proximal mper peptide | no | immune system | 2023-02-17 | 2024-05-22 | x-ray diffraction | 2.08 | 0.229 | 0.199 | 38761800 | 10.1016/j.cell.2024.04.033 | 0 | auth_asym_id | FabH:FabL | IGHV7 | IGKV3 | A | B | QVQLVQSGSELKKPGASVNISCKASGYNFTSHALNWVRQAPGQGLDWLGWINTNTGNPTYAQGFTGRFVFSLDTSVGSAYLQISSLKAEDSAVYFCARVRFHGSGSFPQPADFYYYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERGTLSCRASQSVRGGYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSASGTDYTLTISRLEPEDFAVYYCQFYGGSPRALTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGSELKKPGASVNISCKASGYNFTSHALNWVRQAPGQGLDWLGWINTNTGNPTYAQGFTGRFVFSLDTSVGSAYLQISSLKAEDSAVYFCARVRFHGSGSFPQPADFYYYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | EIVLTQSPGTLSLSPGERGTLSCRASQSVRGGYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSASGTDYTLTISRLEPEDFAVYYCQFYGGSPRALTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 23.36817 | 22.901539 | 233 | 217 | 226 | 216 | 231 | 216 | 112 | dh1322.1 heavy chain | dh1322.1 light chain | homo sapiens | homo sapiens | P | peptide | env polyprotein | human immunodeficiency virus 1 | 41 | 24 | 0.89 | HL | train |
8g8n_A_B | 8g8n | ctla4 fab with peptide | no | immune system | 2023-02-18 | 2024-01-17 | x-ray diffraction | 3 | 0.288 | 0.239 | 38164757 | 10.1136/jitc-2023-007785 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV6 | A | B | QVQLVQSGAEVKKPGSSVKVSCKASGYTFTNYFMNWVRQAPGQGLEWMGRVDPEQGRADYAEKFKKRVTITADKSTSTAYMELSSLRSEDTAVYYCARRAMDNYGFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPDFQSVTPKEKVTITCSANSALSYMYWYQQKPDQSPKLWVHGTSNLASGVPSRFSGSGSGTDFTLTINSLEAEDAATYYCHHWSNTQWTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGSSVKVSCKASGYTFTNYFMNWVRQAPGQGLEWMGRVDPEQGRADYAEKFKKRVTITADKSTSTAYMELSSLRSEDTAVYYCARRAMDNYGFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | EIVLTQSPDFQSVTPKEKVTITCSANSALSYMYWYQQKPDQSPKLWVHGTSNLASGVPSRFSGSGSGTDFTLTINSLEAEDAATYYCHHWSNTQWTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 21.402943 | 23.10778 | 222 | 213 | 213 | 211 | 219 | 211 | 91 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | C | peptide | cys-pro-gly-lys-gly-leu-pro-ser-cys | synthetic construct | 23 | 14 | 1 | HL | train |
8g8n_D_E | 8g8n | ctla4 fab with peptide | no | immune system | 2023-02-18 | 2024-01-17 | x-ray diffraction | 3 | 0.288 | 0.239 | 38164757 | 10.1136/jitc-2023-007785 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV6 | D | E | QVQLVQSGAEVKKPGSSVKVSCKASGYTFTNYFMNWVRQAPGQGLEWMGRVDPEQGRADYAEKFKKRVTITADKSTSTAYMELSSLRSEDTAVYYCARRAMDNYGFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPDFQSVTPKEKVTITCSANSALSYMYWYQQKPDQSPKLWVHGTSNLASGVPSRFSGSGSGTDFTLTINSLEAEDAATYYCHHWSNTQWTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGSSVKVSCKASGYTFTNYFMNWVRQAPGQGLEWMGRVDPEQGRADYAEKFKKRVTITADKSTSTAYMELSSLRSEDTAVYYCARRAMDNYGFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPDFQSVTPKEKVTITCSANSALSYMYWYQQKPDQSPKLWVHGTSNLASGVPSRFSGSGSGTDFTLTINSLEAEDAATYYCHHWSNTQWTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 21.910547 | 22.931677 | 222 | 213 | 217 | 211 | 222 | 213 | 96 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | F | peptide | cys-pro-gly-lys-gly-leu-pro-ser-cys | synthetic construct | 23 | 14 | 1 | HL | train |
8g8n_G_I | 8g8n | ctla4 fab with peptide | no | immune system | 2023-02-18 | 2024-01-17 | x-ray diffraction | 3 | 0.288 | 0.239 | 38164757 | 10.1136/jitc-2023-007785 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV6 | G | I | QVQLVQSGAEVKKPGSSVKVSCKASGYTFTNYFMNWVRQAPGQGLEWMGRVDPEQGRADYAEKFKKRVTITADKSTSTAYMELSSLRSEDTAVYYCARRAMDNYGFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPDFQSVTPKEKVTITCSANSALSYMYWYQQKPDQSPKLWVHGTSNLASGVPSRFSGSGSGTDFTLTINSLEAEDAATYYCHHWSNTQWTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGSSVKVSCKASGYTFTNYFMNWVRQAPGQGLEWMGRVDPEQGRADYAEKFKKRVTITADKSTSTAYMELSSLRSEDTAVYYCARRAMDNYGFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | IVLTQSPDFQSVTPKEKVTITCSANSALSYMYWYQQKPDQSPKLWVHGTSNLASGVPSRFSGSGSGTDFTLTINSLEAEDAATYYCHHWSNTQWTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 21.79213 | 22.891605 | 222 | 213 | 216 | 209 | 222 | 212 | 94 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | J | peptide | cys-pro-gly-lys-gly-leu-pro-ser-cys | synthetic construct | 25 | 15 | 0.94 | HL | train |
8g8n_H_L | 8g8n | ctla4 fab with peptide | no | immune system | 2023-02-18 | 2024-01-17 | x-ray diffraction | 3 | 0.288 | 0.239 | 38164757 | 10.1136/jitc-2023-007785 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV6 | H | L | QVQLVQSGAEVKKPGSSVKVSCKASGYTFTNYFMNWVRQAPGQGLEWMGRVDPEQGRADYAEKFKKRVTITADKSTSTAYMELSSLRSEDTAVYYCARRAMDNYGFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPDFQSVTPKEKVTITCSANSALSYMYWYQQKPDQSPKLWVHGTSNLASGVPSRFSGSGSGTDFTLTINSLEAEDAATYYCHHWSNTQWTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGSSVKVSCKASGYTFTNYFMNWVRQAPGQGLEWMGRVDPEQGRADYAEKFKKRVTITADKSTSTAYMELSSLRSEDTAVYYCARRAMDNYGFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | EIVLTQSPDFQSVTPKEKVTITCSANSALSYMYWYQQKPDQSPKLWVHGTSNLASGVPSRFSGSGSGTDFTLTINSLEAEDAATYYCHHWSNTQWTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 21.436804 | 23.37995 | 222 | 213 | 214 | 213 | 220 | 213 | 91 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | P | peptide | cys-pro-gly-lys-gly-leu-pro-ser-cys | synthetic construct | 24 | 15 | 1 | HL | train |
8g8n_O_Q | 8g8n | ctla4 fab with peptide | no | immune system | 2023-02-18 | 2024-01-17 | x-ray diffraction | 3 | 0.288 | 0.239 | 38164757 | 10.1136/jitc-2023-007785 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV6 | O | Q | QVQLVQSGAEVKKPGSSVKVSCKASGYTFTNYFMNWVRQAPGQGLEWMGRVDPEQGRADYAEKFKKRVTITADKSTSTAYMELSSLRSEDTAVYYCARRAMDNYGFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPDFQSVTPKEKVTITCSANSALSYMYWYQQKPDQSPKLWVHGTSNLASGVPSRFSGSGSGTDFTLTINSLEAEDAATYYCHHWSNTQWTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGSSVKVSCKASGYTFTNYFMNWVRQAPGQGLEWMGRVDPEQGRADYAEKFKKRVTITADKSTSTAYMELSSLRSEDTAVYYCARRAMDNYGFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPDFQSVTPKEKVTITCSANSALSYMYWYQQKPDQSPKLWVHGTSNLASGVPSRFSGSGSGTDFTLTINSLEAEDAATYYCHHWSNTQWTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 21.867203 | 22.963411 | 222 | 213 | 217 | 211 | 222 | 213 | 94 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | R | peptide | cys-pro-gly-lys-gly-leu-pro-ser-cys | synthetic construct | 21 | 13 | 1 | HL | train |
8g8n_K_M | 8g8n | ctla4 fab with peptide | no | immune system | 2023-02-18 | 2024-01-17 | x-ray diffraction | 3 | 0.288 | 0.239 | 38164757 | 10.1136/jitc-2023-007785 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV6 | K | M | QVQLVQSGAEVKKPGSSVKVSCKASGYTFTNYFMNWVRQAPGQGLEWMGRVDPEQGRADYAEKFKKRVTITADKSTSTAYMELSSLRSEDTAVYYCARRAMDNYGFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPDFQSVTPKEKVTITCSANSALSYMYWYQQKPDQSPKLWVHGTSNLASGVPSRFSGSGSGTDFTLTINSLEAEDAATYYCHHWSNTQWTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGSSVKVSCKASGYTFTNYFMNWVRQAPGQGLEWMGRVDPEQGRADYAEKFKKRVTITADKSTSTAYMELSSLRSEDTAVYYCARRAMDNYGFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | EIVLTQSPDFQSVTPKEKVTITCSANSALSYMYWYQQKPDQSPKLWVHGTSNLASGVPSRFSGSGSGTDFTLTINSLEAEDAATYYCHHWSNTQWTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 20.620224 | 23.276321 | 222 | 213 | 214 | 213 | 219 | 213 | 91 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | Z | peptide | cys-pro-gly-lys-gly-leu-pro-ser-cys | synthetic construct | 21 | 13 | 1 | HL | train |
8cma_H_L | 8cma | sars-cov-2 delta-rbd complexed with ba.4/5-35 fab | yes | viral protein | 2023-02-18 | 2024-02-28 | x-ray diffraction | 3.29 | 0.268 | 0.231 | 38627386 | 10.1038/s41467-024-47393-3 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | H | L | QVQLQQSGGGLVQPGGSLRLSCAASGITVSVNYMSWVRQAPGKGLEWVSLIFAGGSTFYADSVKGRFTISRDNSKNTLFLHMNSLRLEDTAVYYCARDLGPVGATDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK | DIVMTQTPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSETEFTLTISSLQSEDFALYYCQQYHTWPPMYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQQSGGGLVQPGGSLRLSCAASGITVSVNYMSWVRQAPGKGLEWVSLIFAGGSTFYADSVKGRFTISRDNSKNTLFLHMNSLRLEDTAVYYCARDLGPVGATDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | DIVMTQTPATLSVSPGERATLSCRASQSVSSNLAWYQQKPGQAPRLLIYGASTRATGIPARFSGSGSETEFTLTISSLQSEDFALYYCQQYHTWPPMYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.668882 | 22.566425 | 223 | 216 | 214 | 215 | 219 | 215 | 104 | ba.4/5-35 heavy chain | ba.4/5-35 light chain | homo sapiens | homo sapiens | E | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 52 | 23 | 0.88 | HL | train |
8g8w_B | 8g8w | molecular mechanism of nucleotide inhibition of human uncoupling protein 1 | no | membrane protein | 2023-02-20 | 2023-06-07 | electron microscopy | 3.8 | N.A. | N.A. | 37256948 | 10.1126/sciadv.adh4251 | 0 | auth_asym_id | VH+ | IGHV3 | N.A. | B | N.A. | GPSQVQLVESGGGLVQAGDSLRLSCAASGLTLKNYAMGWFRQAPGKEHEFVAVISWSGSGTSYADSVEGRFTISRDNAKNTAFLQMSSLKPEDTAVYYCAARDGGYGSRWPDEYTYWGQGTQVTVPPLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLI... | N.A. | QVQLVESGGGLVQAGDSLRLSCAASGLTLKNYAMGWFRQAPGKEHEFVAVISWSGSGTSYADSVEGRFTISRDNAKNTAFLQMSSLKPEDTAVYYCAARDGGYGSRWPDEYTYWGQGTQVTVPPLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNK... | N.A. | 28.63074 | 0 | 490 | 0 | 398 | 0 | 463 | 0 | 0 | pro-macrobody 71, maltose/maltodextrin-binding periplasmic protein chimera | N.A. | synthetic construct | N.A. | A | protein | mitochondrial brown fat uncoupling protein 1 | homo sapiens | 26 | 8 | 0.57 | H_only | train |
8g8w_C | 8g8w | molecular mechanism of nucleotide inhibition of human uncoupling protein 1 | no | membrane protein | 2023-02-20 | 2023-06-07 | electron microscopy | 3.8 | N.A. | N.A. | 37256948 | 10.1126/sciadv.adh4251 | 0 | auth_asym_id | VH+ | IGHV3 | N.A. | C | N.A. | GPSQVQLVESGGGLVQAGGSLRLSCAPSGRTSSTYTMGWFRQAPGKEREFVAAISWTGTPYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAARPGLFIFVSDYARTAKYDYWGQGTQVTVPPLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFL... | N.A. | VQLVESGGGLVQAGGSLRLSCAPSGRTSSTYTMGWFRQAPGKEREFVAAISWTGTPYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAAARPGLFIFVSDYARTAKYDYWGQGTQVTVPPLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLI... | N.A. | 22.666178 | 0 | 494 | 0 | 215 | 0 | 407 | 0 | 0 | pro-macrobody 65, maltose/maltodextrin-binding periplasmic protein chimera | N.A. | synthetic construct | N.A. | A | protein | mitochondrial brown fat uncoupling protein 1 | homo sapiens | 24 | 12 | 0.86 | H_only | train |
8cml_A | 8cml | cryo-em structure of complement c5 in complex with nanobodies unbc5-1 and unbc5-2 | no | immune system | 2023-02-20 | 2023-09-27 | electron microscopy | 3.6 | N.A. | N.A. | 37356719 | 10.1016/j.jbc.2023.104956 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | A | N.A. | MEVQLVESGGGLVQPGGSLRLSCAASGRTFSTNTMGWFRQAPGQEREFVALISGNGRILDYSDSAKGRFTISRDNAKNTVYLQMNSLKPEDTGVYFCAAEFRGRTLASYWGQGTQVTVSSAAASGSLEQKLISEEDLNGAAHHHHHHGAA | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGRTFSTNTMGWFRQAPGQEREFVALISGNGRILDYSDSAKGRFTISRDNAKNTVYLQMNSLKPEDTGVYFCAAEFRGRTLASYWGQGTQVTVSSA | N.A. | 13.645261 | 0 | 150 | 0 | 120 | 0 | 120 | 0 | 0 | nanobody unbc5-2 | N.A. | lama glama | N.A. | B | protein | complement c5 alpha chain | homo sapiens | 39 | 15 | 0.83 | H_only | train |
8cml_C | 8cml | cryo-em structure of complement c5 in complex with nanobodies unbc5-1 and unbc5-2 | no | immune system | 2023-02-20 | 2023-09-27 | electron microscopy | 3.6 | N.A. | N.A. | 37356719 | 10.1016/j.jbc.2023.104956 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | MEVQLVESGGGLVQAGGSLRLSCAASGFTFDDYAIGWFRQAPGKEREGVSCISTSDGSTYYADSVKGRFTISSDNAKNTVYLQMNSLKPEDTAVYYCAADPYLPIRGRGIESTDFGSWGQGTQVTVSSAAASGSLEQKLISEEDLNGAAHHHHHHGAA | N.A. | EVQLVESGGGLVQAGGSLRLSCAASGFTFDDYAIGWFRQAPGKEREGVSCISTSDGSTYYADSVKGRFTISSDNAKNTVYLQMNSLKPEDTAVYYCAADPYLPIRGRGIESTDFGSWGQGTQVTVSSA | N.A. | 13.828754 | 0 | 158 | 0 | 128 | 0 | 128 | 0 | 0 | nanobody unbc5-1 | N.A. | lama glama | N.A. | B | protein | complement c5 alpha chain | homo sapiens | 36 | 16 | 0.84 | H_only | train |
8g94_E | 8g94 | structure of cd69-bound s1pr1 coupled to heterotrimeric gi | no | guanine nucleotide-binding protein | 2023-02-21 | 2023-04-19 | electron microscopy | 3.15 | N.A. | N.A. | 37039481 | 10.7554/eLife.88204 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAHHHHHHHH | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.28788 | 0 | 259 | 0 | 231 | 0 | 246 | 0 | 0 | scfv16 | N.A. | mus musculus | N.A. | B;C | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 34;22 | 22;9 | 0.96;0.82 | H_only | train |
8g9w_H_L | 8g9w | cryo-em structure of vfp49.02 fab in complex with hiv-1 env bg505 ds-sosip.664 (conformation 1) | no | immune system | 2023-02-22 | 2023-04-19 | electron microscopy | 4.66 | N.A. | N.A. | 37098956 | 10.1128/jvi.01604-22 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | H | L | EVMLVESGGGLVKPGGSLKLSCEASGFSFGFYSLSWVRQTPEKRLEWVATIAGSGVGGQTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAVFYCARHGEGKYGSNFAYWGQGTTLTVSSASTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCDKGLEVLFQG | DVVLTQSPATLSVTPGDSVSLSCRASQTISDNLHWYLQKSHESPRLLIKYSSQSISGIPSRFSGSGSGTDFTLNINSVETEDFGMYFCQQTNSWPLTFGAGTKLELKRTDAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EVMLVESGGGLVKPGGSLKLSCEASGFSFGFYSLSWVRQTPEKRLEWVATIAGSGVGGQTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAVFYCARHGEGKYGSNFAYWGQGTTLTVS | DVVLTQSPATLSVTPGDSVSLSCRASQTISDNLHWYLQKSHESPRLLIKYSSQSISGIPSRFSGSGSGTDFTLNINSVETEDFGMYFCQQTNSWPLTFGAGTKLEL | 13.642934 | 12.943452 | 235 | 214 | 122 | 106 | 122 | 106 | 45 | vfp49.02 heavy chain | vfp49.02 light chain | mus musculus | mus musculus | O;E | protein;protein | envelope glycoprotein gp41;envelope glycoprotein gp120 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 30;18 | 18;8 | 0.9;0.89 | HL | train |
8g9x_H_L | 8g9x | cryo-em structure of vfp49.02 fab in complex with hiv-1 env bg505 ds-sosip.664 (conformation 2) | no | immune system | 2023-02-22 | 2023-04-19 | electron microscopy | 4.46 | N.A. | N.A. | 37098956 | 10.1128/jvi.01604-22 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | H | L | EVMLVESGGGLVKPGGSLKLSCEASGFSFGFYSLSWVRQTPEKRLEWVATIAGSGVGGQTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAVFYCARHGEGKYGSNFAYWGQGTTLTVSSASTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCDKGLEVLFQG | DVVLTQSPATLSVTPGDSVSLSCRASQTISDNLHWYLQKSHESPRLLIKYSSQSISGIPSRFSGSGSGTDFTLNINSVETEDFGMYFCQQTNSWPLTFGAGTKLELKRTDAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EVMLVESGGGLVKPGGSLKLSCEASGFSFGFYSLSWVRQTPEKRLEWVATIAGSGVGGQTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAVFYCARHGEGKYGSNFAYWGQGTTLTVS | DVVLTQSPATLSVTPGDSVSLSCRASQTISDNLHWYLQKSHESPRLLIKYSSQSISGIPSRFSGSGSGTDFTLNINSVETEDFGMYFCQQTNSWPLTFGAGTKLEL | 13.603357 | 12.98425 | 235 | 214 | 122 | 106 | 122 | 106 | 50 | vfp49.02 heavy chain | vfp49.02 light chain | mus musculus | mus musculus | O | protein | envelope glycoprotein gp41 | human immunodeficiency virus 1 | 31 | 21 | 0.95 | HL | train |
8g9y_H_L | 8g9y | cryo-em structure of vfp49.02 fab in complex with hiv-1 env bg505 ds-sosip.664 (conformation 3) | no | immune system | 2023-02-22 | 2023-04-19 | electron microscopy | 4.28 | N.A. | N.A. | 37098956 | 10.1128/jvi.01604-22 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | H | L | EVMLVESGGGLVKPGGSLKLSCEASGFSFGFYSLSWVRQTPEKRLEWVATIAGSGVGGQTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAVFYCARHGEGKYGSNFAYWGQGTTLTVSSASTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCDKGLEVLFQG | DVVLTQSPATLSVTPGDSVSLSCRASQTISDNLHWYLQKSHESPRLLIKYSSQSISGIPSRFSGSGSGTDFTLNINSVETEDFGMYFCQQTNSWPLTFGAGTKLELKRTDAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EVMLVESGGGLVKPGGSLKLSCEASGFSFGFYSLSWVRQTPEKRLEWVATIAGSGVGGQTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSEDTAVFYCARHGEGKYGSNFAYWGQGTTLTVS | DVVLTQSPATLSVTPGDSVSLSCRASQTISDNLHWYLQKSHESPRLLIKYSSQSISGIPSRFSGSGSGTDFTLNINSVETEDFGMYFCQQTNSWPLTFGAGTKLEL | 13.732836 | 13.031072 | 235 | 214 | 122 | 106 | 122 | 106 | 38 | vfp49.02 heavy chain | vfp49.02 light chain | mus musculus | mus musculus | D;O | protein;protein | envelope glycoprotein gp41;envelope glycoprotein gp41 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 33;19 | 21;6 | 0.91;0.86 | HL | train |
8ihh_S | 8ihh | cryo-em structure of hca2-gi complex with luf6283 | yes | signaling protein | 2023-02-22 | 2023-08-30 | electron microscopy | 3.06 | N.A. | N.A. | 37736747 | 10.1038/s41467-023-41650-7 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK | N.A. | VESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKL | N.A. | 17.218185 | 0 | 248 | 0 | 226 | 0 | 241 | 0 | 0 | scfv16 | N.A. | synthetic construct | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;mus musculus | 34;21 | 20;10 | 0.91;1.0 | H_only | train |
8ihi_S | 8ihi | cryo-em structure of hca2-gi complex with acifran | yes | signaling protein | 2023-02-22 | 2023-08-30 | electron microscopy | 3.11 | N.A. | N.A. | 37736747 | 10.1038/s41467-023-41650-7 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK | N.A. | VESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKL | N.A. | 17.236448 | 0 | 248 | 0 | 226 | 0 | 241 | 0 | 0 | scfv16 | N.A. | synthetic construct | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;mus musculus | 33;22 | 21;9 | 0.91;0.82 | H_only | train |
8ihj_S | 8ihj | cryo-em structure of hca3-gi complex with acifran | yes | signaling protein | 2023-02-22 | 2023-08-30 | electron microscopy | 3.07 | N.A. | N.A. | 37736747 | 10.1038/s41467-023-41650-7 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK | N.A. | VESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKL | N.A. | 17.33373 | 0 | 248 | 0 | 226 | 0 | 241 | 0 | 0 | scfv16 | N.A. | synthetic construct | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;mus musculus | 31;20 | 19;8 | 0.95;0.89 | H_only | train |
8ihb_S | 8ihb | cryo-em structure of hca2-gi complex with gsk256073 | yes | signaling protein | 2023-02-22 | 2023-09-13 | electron microscopy | 2.85 | N.A. | N.A. | 37736747 | 10.1038/s41467-023-41650-7 | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK | N.A. | VESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKL | N.A. | 17.16306 | 0 | 248 | 0 | 226 | 0 | 241 | 0 | 0 | scfv16 | N.A. | synthetic construct | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;mus musculus | 32;21 | 20;8 | 0.91;0.8 | H_only | train |
8cn9_B_A | 8cn9 | factor vii binding fab of the bispecific antibody hmb-001 in complex with factor vii | no | blood clotting | 2023-02-22 | 2023-12-27 | x-ray diffraction | 3.4 | 0.356 | 0.303 | 39196196 | 10.1038/s44161-023-00418-4 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV3 | B | A | QVQLQESGPGLVKPSQTLSLTCTVSGYSISSDSAWSWIRQPPGKGLEWIGYIQYSGSTNYNPSLKSRVTISRDTSKNQFSLKLSSVTAADTAVYYCARSVNYYGNSFAVGYWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRV | EIVLTQSPATLSLSPGERATLSCRASQGISDYLHWYQQKPGEAPRLLIKYTSQPATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQNGHSFPLTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQESGPGLVKPSQTLSLTCTVSGYSISSDSAWSWIRQPPGKGLEWIGYIQYSGSTNYNPSLKSRVTISRDTSKNQFSLKLSSVTAADTAVYYCARSVNYYGNSFAVGYWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRV | EIVLTQSPATLSLSPGERATLSCRASQGISDYLHWYQQKPGEAPRLLIKYTSQPATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQNGHSFPLTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 20.960592 | 23.317877 | 220 | 214 | 217 | 212 | 220 | 212 | 103 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | C;D | protein;protein | coagulation factor vii;coagulation factor vii | homo sapiens;homo sapiens | 28;34 | 13;14 | 0.87;0.74 | HL | train |
8cn9_G_F | 8cn9 | factor vii binding fab of the bispecific antibody hmb-001 in complex with factor vii | no | blood clotting | 2023-02-22 | 2023-12-27 | x-ray diffraction | 3.4 | 0.356 | 0.303 | 39196196 | 10.1038/s44161-023-00418-4 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV3 | G | F | QVQLQESGPGLVKPSQTLSLTCTVSGYSISSDSAWSWIRQPPGKGLEWIGYIQYSGSTNYNPSLKSRVTISRDTSKNQFSLKLSSVTAADTAVYYCARSVNYYGNSFAVGYWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRV | EIVLTQSPATLSLSPGERATLSCRASQGISDYLHWYQQKPGEAPRLLIKYTSQPATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQNGHSFPLTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQESGPGLVKPSQTLSLTCTVSGYSISSDSAWSWIRQPPGKGLEWIGYIQYSGSTNYNPSLKSRVTISRDTSKNQFSLKLSSVTAADTAVYYCARSVNYYGNSFAVGYWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRV | EIVLTQSPATLSLSPGERATLSCRASQGISDYLHWYQQKPGEAPRLLIKYTSQPATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQNGHSFPLTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSF | 20.914316 | 22.957888 | 220 | 214 | 216 | 209 | 220 | 209 | 100 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | H;I | protein;protein | coagulation factor vii;coagulation factor vii | homo sapiens;homo sapiens | 31;34 | 13;15 | 0.87;0.75 | HL | train |
8cn9_L_K | 8cn9 | factor vii binding fab of the bispecific antibody hmb-001 in complex with factor vii | no | blood clotting | 2023-02-22 | 2023-12-27 | x-ray diffraction | 3.4 | 0.356 | 0.303 | 39196196 | 10.1038/s44161-023-00418-4 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV3 | L | K | QVQLQESGPGLVKPSQTLSLTCTVSGYSISSDSAWSWIRQPPGKGLEWIGYIQYSGSTNYNPSLKSRVTISRDTSKNQFSLKLSSVTAADTAVYYCARSVNYYGNSFAVGYWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRV | EIVLTQSPATLSLSPGERATLSCRASQGISDYLHWYQQKPGEAPRLLIKYTSQPATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQNGHSFPLTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQESGPGLVKPSQTLSLTCTVSGYSISSDSAWSWIRQPPGKGLEWIGYIQYSGSTNYNPSLKSRVTISRDTSKNQFSLKLSSVTAADTAVYYCARSVNYYGNSFAVGYWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDK | EIVLTQSPATLSLSPGERATLSCRASQGISDYLHWYQQKPGEAPRLLIKYTSQPATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQNGHSFPLTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 20.960066 | 23.474592 | 220 | 214 | 216 | 213 | 218 | 213 | 102 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | M;N | protein;protein | coagulation factor vii;coagulation factor vii | homo sapiens;homo sapiens | 27;30 | 13;14 | 0.93;0.88 | HL | train |
8cn9_Q_P | 8cn9 | factor vii binding fab of the bispecific antibody hmb-001 in complex with factor vii | no | blood clotting | 2023-02-22 | 2023-12-27 | x-ray diffraction | 3.4 | 0.356 | 0.303 | 39196196 | 10.1038/s44161-023-00418-4 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV3 | Q | P | QVQLQESGPGLVKPSQTLSLTCTVSGYSISSDSAWSWIRQPPGKGLEWIGYIQYSGSTNYNPSLKSRVTISRDTSKNQFSLKLSSVTAADTAVYYCARSVNYYGNSFAVGYWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRV | EIVLTQSPATLSLSPGERATLSCRASQGISDYLHWYQQKPGEAPRLLIKYTSQPATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQNGHSFPLTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQESGPGLVKPSQTLSLTCTVSGYSISSDSAWSWIRQPPGKGLEWIGYIQYSGSTNYNPSLKSRVTISRDTSKNQFSLKLSSVTAADTAVYYCARSVNYYGNSFAVGYWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRV | EIVLTQSPATLSLSPGERATLSCRASQGISDYLHWYQQKPGEAPRLLIKYTSQPATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQNGHSFPLTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 20.786554 | 23.4322 | 220 | 214 | 216 | 210 | 220 | 213 | 107 | fab heavy chain | fab light chain | homo sapiens | homo sapiens | R;S | protein;protein | coagulation factor vii;coagulation factor vii | homo sapiens;homo sapiens | 30;34 | 12;15 | 0.8;0.71 | HL | train |
8gag_S | 8gag | cannabinoid receptor 1-gi complex with novel ligand | no | signaling protein | 2023-02-22 | 2024-02-28 | electron microscopy | 3.3 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAHHHHHHHH | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.807882 | 0 | 259 | 0 | 232 | 0 | 246 | 0 | 0 | scfv16 | N.A. | mus musculus | N.A. | B;A | protein;protein | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(i) subunit alpha-1 | homo sapiens;homo sapiens | 17;35 | 7;22 | 0.88;0.88 | H_only | train |
8gas_C_A | 8gas | vfp48.02 fab in complex with bg505 ds-sosip env trimer | no | viral protein/immune system | 2023-02-23 | 2023-04-19 | electron microscopy | 4.04 | N.A. | N.A. | 37098956 | 10.1128/jvi.01604-22 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV2 | C | A | QVQLQQPGAEFVKPGASVRMSCKASGYTFTSYWIAWVKQRPGQGLEWIGDIYPGSGYTNYNGKFKNRATLTVDTSSNTAYMQLSSLTSEDSAVYYCTRGGTTFVAEPWLAYWGQGTLVAVSA | DVVMTQTPLTLSVTIGQPASISCKSSQSLLDSDGKTYLNWLLQRPGQSPKRLIYLVSKLDSGVPDRFTGSGSGTDFTLKISRVEAEDLGIYYCWQGTHFPQTFGGGTRLEIK | QVQLQQPGAEFVKPGASVRMSCKASGYTFTSYWIAWVKQRPGQGLEWIGDIYPGSGYTNYNGKFKNRATLTVDTSSNTAYMQLSSLTSEDSAVYYCTRGGTTFVAEPWLAYWGQGTLVAVS | DVVMTQTPLTLSVTIGQPASISCKSSQSLLDSDGKTYLNWLLQRPGQSPKRLIYLVSKLDSGVPDRFTGSGSGTDFTLKISRVEAEDLGIYYCWQGTHFPQTFGGGTRLEIK | 13.926564 | 13.788947 | 122 | 112 | 121 | 112 | 121 | 112 | 37 | vfp48.02 heavy chain | vfp48.02 light chain | mus musculus | mus musculus | D;E | protein;protein | envelope glycoprotein gp120;envelope glycoprotein gp41 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 14;26 | 6;15 | 0.75;0.94 | HL | train |
8gas_H_L | 8gas | vfp48.02 fab in complex with bg505 ds-sosip env trimer | no | viral protein/immune system | 2023-02-23 | 2023-04-19 | electron microscopy | 4.04 | N.A. | N.A. | 37098956 | 10.1128/jvi.01604-22 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV2 | H | L | QVQLQQPGAEFVKPGASVRMSCKASGYTFTSYWIAWVKQRPGQGLEWIGDIYPGSGYTNYNGKFKNRATLTVDTSSNTAYMQLSSLTSEDSAVYYCTRGGTTFVAEPWLAYWGQGTLVAVSA | DVVMTQTPLTLSVTIGQPASISCKSSQSLLDSDGKTYLNWLLQRPGQSPKRLIYLVSKLDSGVPDRFTGSGSGTDFTLKISRVEAEDLGIYYCWQGTHFPQTFGGGTRLEIK | QVQLQQPGAEFVKPGASVRMSCKASGYTFTSYWIAWVKQRPGQGLEWIGDIYPGSGYTNYNGKFKNRATLTVDTSSNTAYMQLSSLTSEDSAVYYCTRGGTTFVAEPWLAYWGQGTLVAVS | DVVMTQTPLTLSVTIGQPASISCKSSQSLLDSDGKTYLNWLLQRPGQSPKRLIYLVSKLDSGVPDRFTGSGSGTDFTLKISRVEAEDLGIYYCWQGTHFPQTFGGGTRLEIK | 13.927677 | 13.79382 | 122 | 112 | 121 | 112 | 121 | 112 | 37 | vfp48.02 heavy chain | vfp48.02 light chain | mus musculus | mus musculus | G;B | protein;protein | envelope glycoprotein gp120;envelope glycoprotein gp41 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 15;26 | 7;15 | 0.78;0.94 | HL | train |
8gas_I_F | 8gas | vfp48.02 fab in complex with bg505 ds-sosip env trimer | no | viral protein/immune system | 2023-02-23 | 2023-04-19 | electron microscopy | 4.04 | N.A. | N.A. | 37098956 | 10.1128/jvi.01604-22 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV2 | I | F | QVQLQQPGAEFVKPGASVRMSCKASGYTFTSYWIAWVKQRPGQGLEWIGDIYPGSGYTNYNGKFKNRATLTVDTSSNTAYMQLSSLTSEDSAVYYCTRGGTTFVAEPWLAYWGQGTLVAVSA | DVVMTQTPLTLSVTIGQPASISCKSSQSLLDSDGKTYLNWLLQRPGQSPKRLIYLVSKLDSGVPDRFTGSGSGTDFTLKISRVEAEDLGIYYCWQGTHFPQTFGGGTRLEIK | QVQLQQPGAEFVKPGASVRMSCKASGYTFTSYWIAWVKQRPGQGLEWIGDIYPGSGYTNYNGKFKNRATLTVDTSSNTAYMQLSSLTSEDSAVYYCTRGGTTFVAEPWLAYWGQGTLVAVS | DVVMTQTPLTLSVTIGQPASISCKSSQSLLDSDGKTYLNWLLQRPGQSPKRLIYLVSKLDSGVPDRFTGSGSGTDFTLKISRVEAEDLGIYYCWQGTHFPQTFGGGTRLEIK | 13.943437 | 13.787981 | 122 | 112 | 121 | 112 | 121 | 112 | 36 | vfp48.02 heavy chain | vfp48.02 light chain | mus musculus | mus musculus | J;K | protein;protein | envelope glycoprotein gp120;envelope glycoprotein gp41 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 15;25 | 7;14 | 0.78;0.93 | HL | train |
8gat_M_N | 8gat | structure of human nds.1 fab and 1g01 fab in complex with influenza virus neuraminidase from a/indiana/10/2011 (h3n2v), based on consensus cryo-em map with only fab 1g01 resolved | no | viral protein/immune system | 2023-02-23 | 2024-02-28 | electron microscopy | 3 | N.A. | N.A. | 38430907 | 10.1016/j.immuni.2024.02.003 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | M | N | DEVQLVESGGRALRPGGSLRLSCAASGFKFDDYAMSWVRQVPGKGLEFVSGLNWNGDITAYTDSVKGRFTVSRDNAKNSLYLHINSPKPEDTALYYCARTSSWGDYTRGPEPKITWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCHHHHHH | DDIQLTQSPSFLSASVGDRITITCRASQGIDGYLAWYQQRPGKAPNLLIYAASLLQSGVPSRFSGSGYGTEFTLTISSLQPEDFATYYCQHLDSYPLFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVESGGRALRPGGSLRLSCAASGFKFDDYAMSWVRQVPGKGLEFVSGLNWNGDITAYTDSVKGRFTVSRDNAKNSLYLHINSPKPEDTALYYCARTSSWGDYTRGPEPKITWYFDLWGRGTLVTV | DIQLTQSPSFLSASVGDRITITCRASQGIDGYLAWYQQRPGKAPNLLIYAASLLQSGVPSRFSGSGYGTEFTLTISSLQPEDFATYYCQHLDSYPLFTFGPGTKVDIK | 15.072675 | 13.726439 | 240 | 216 | 127 | 108 | 127 | 108 | 49 | fab 1g01, heavy chain | fab 1g01, light chain | homo sapiens | homo sapiens | A | protein | vasodilator-stimulated phosphoprotein, neuraminidase chimera | homo sapiens | 57 | 22 | 0.88 | HL | train |
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