PDB_ID_chain
stringlengths
6
10
PDB_ID
stringlengths
4
4
Title
stringlengths
4
230
Mutation(s)
stringclasses
2 values
Classification
stringclasses
305 values
Deposit_date
stringdate
1976-03-17 00:00:00
2026-01-20 00:00:00
Release_date
stringdate
1976-05-19 00:00:00
2026-02-25 00:00:00
Method
stringclasses
5 values
Resolution
stringclasses
459 values
R_free
stringclasses
227 values
R_work
stringclasses
211 values
PMID
stringlengths
4
8
DOI
stringlengths
4
68
Model_index
int64
0
76
Asym_ID_type
stringclasses
2 values
Ab_type
stringclasses
30 values
H_subgroup
stringclasses
8 values
L_subgroup
stringclasses
19 values
H_chain_ID
stringclasses
60 values
L_chain_ID
stringclasses
58 values
H_fas_seq
stringlengths
4
919
L_fas_seq
stringlengths
4
627
H_filled_pdb_seq
stringlengths
4
896
L_filled_pdb_seq
stringlengths
4
523
H_mean_radius
float64
0
79.7
L_mean_radius
float64
0
84.3
H_fas_seq_len
int64
0
919
L_fas_seq_len
int64
0
627
H_pdb_seq_len
int64
0
879
L_pdb_seq_len
int64
0
523
H_filled_seq_len
int64
0
896
L_filled_seq_len
int64
0
523
HL_inf_res_num
int64
0
175
H_mol_name
stringlengths
2
331
L_mol_name
stringlengths
2
151
H_species
stringclasses
68 values
L_species
stringclasses
42 values
Ag_chain_ID(s)
stringclasses
279 values
Ag_type(s)
stringclasses
16 values
Ag_mol_name(s)
stringlengths
2
390
Ag_species
stringclasses
743 values
Ab_ag_inf_res_num
stringlengths
1
11
CDR_inf_res_num
stringclasses
444 values
CDR_inf_res_ratio
stringlengths
1
19
hl_label
stringclasses
3 values
split
stringclasses
1 value
9c0x_H_L
9c0x
crystal structure of chimeric hemagglutinin ch11/1 in complex with broad protective antibody 31.b.09
no
viral protein/immune system
2024-05-28
2025-05-07
x-ray diffraction
4.35
0.382
0.335
39937865
10.1073/pnas.2416628122
0
auth_asym_id
VH:VL
IGHV1
IGKV2
H
L
QVQLVQSGAEVKKPGASVKVSCKASGYSFSSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVFYCARDRPHILTGFDFDYWGQGTLVTVS
DVVMTQSPVSLPVTLGQPASISCRSSQGLVYIDGNTYLNWFQQRPGQSPRRLIYNVFTRDSGVPDRFSGSGSGTDFTLKITTVEAEDVGVYYCMQGTHWPYTFGQGTKLEIKRA
QVQLVQSGAEVKKPGASVKVSCKASGYSFSSYGISWVRQAPGQGLEWMGWISAYNGNTNYAQKLQGRVTMTTDTSTSTAYMELRSLRSDDTAVFYCARDRPHILTGFDFDYWGQGTLVTVS
DVVMTQSPVSLPVTLGQPASISCRSSQGLVYIDGNTYLNWFQQRPGQSPRRLIYNVFTRDSGVPDRFSGSGSGTDFTLKITTVEAEDVGVYYCMQGTHWPYTFGQGTKLEIKRA
14.088431
13.898872
121
114
121
114
121
114
42
antibody 31.b.09 fab heavy chain
antibody 31.b.09 fab light chain
homo sapiens
homo sapiens
B
protein
hemagglutinin ha2 subunit
influenza a virus
40
17
0.94
HL
train
8znu_A
8znu
catalytic antibody t99_c220a_dp95
no
immune system
2024-05-28
2025-05-28
x-ray diffraction
2
0.265
0.22
40356286
10.1080/19420862.2025.2503978
0
auth_asym_id
FabL
N.A.
IGKV2
N.A.
A
N.A.
MDIVMTQTPVSLAVTPGQSASISCRSSQSLLHGDGRSYLYWYVQRPGQSPQLLMYEASTRVSGVPDRFTGSGSGTDFTLKISRVEAEDVGVYYCMQGTHWGTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEALEVLFQ
N.A.
MDIVMTQTPVSLAVTPGQSASISCRSSQSLLHGDGRSYLYWYVQRPGQSPQLLMYEASTRVSGVPDRFTGSGSGTDFTLKISRVEAEDVGVYYCMQGTHWGTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEALEV
0
27.23372
0
225
0
220
0
222
0
N.A.
catalytic antibody t99_c220a_dpro95
N.A.
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
L_only
train
8zoy_B
8zoy
cryo-em structure of human norepinephrine transporter net bound with norepinephrine in an inward open state at a resolution of 2.5 angstrom
no
transport protein/immune system
2024-05-29
2024-09-11
electron microscopy
2.5
N.A.
N.A.
39223283
10.1038/s41422-024-01024-0
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
EVQLVESGGGLVQAGGSLRLSCAASGFPVTNFEMYWYRQAPGKEREWVAAIYSTGITEYADSVKGRFTISRDNSKNTVYLQMNSLKPEDTAVYYCNVKDNGAWRQNYDYWGQGTQVTVSS
N.A.
EVQLVESGGGLVQAGGSLRLSCAASGFPVTNFEMYWYRQAPGKEREWVAAIYSTGITEYADSVKGRFTISRDNSKNTVYLQMNSLKPEDTAVYYCNVKDNGAWRQNYDYWGQGTQVTVS
N.A.
13.630707
0
120
0
119
0
119
0
0
nb_bf9
N.A.
lama glama
N.A.
A
protein
sodium-dependent noradrenaline transporter
homo sapiens
48
18
0.86
H_only
train
8zp1_B
8zp1
cryo-em structure of human norepinephrine transporter net bound with reboxetine in an outward-open state at a resolution of 2.5 angstrom
no
transport protein/immune system
2024-05-29
2024-09-11
electron microscopy
2.5
N.A.
N.A.
39223283
10.1038/s41422-024-01024-0
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
EVQLVESGGGLVQAGGSLRLSCAASGFPVYQANMYWYRQAPGKEREWVAAIQSEGRTIYADSVKGRFTISRDNSKNTVYLQMNSLKPEDTAVYYCNVKDAGWASYQYDYWGQGTQVTVSS
N.A.
VQLVESGGGLVQAGGSLRLSCAASGFPVYQANMYWYRQAPGKEREWVAAIQSEGRTIYADSVKGRFTISRDNSKNTVYLQMNSLKPEDTAVYYCNVKDAGWASYQYDYWGQGTQVTVS
N.A.
13.40734
0
120
0
116
0
118
0
0
nb_bb4
N.A.
lama glama
N.A.
A
protein
sodium-dependent noradrenaline transporter
homo sapiens
53
14
0.54
H_only
train
9c1s_A_B
9c1s
fab f946 in complex with ospc type a
no
immune system/antigen
2024-05-29
2025-08-27
x-ray diffraction
2.6
0.251
0.196
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV4
IGKV1
A
B
QVQLQESGPGLVKPSGTLSLTCTVSGASISVGNWWSWVRQPPGKGLEWIGEFYHSGKTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARSDLLTGYFPYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTH
DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQRLNSYPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLQESGPGLVKPSGTLSLTCTVSGASISVGNWWSWVRQPPGKGLEWIGEFYHSGKTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARSDLLTGYFPYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS
DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQRLNSYPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
21.467484
23.147816
230
214
221
212
225
212
107
f946 fab heavy chain
f946 fab light chain
homo sapiens
homo sapiens
C;D
protein;protein
outer surface protein c;outer surface protein c
borreliella burgdorferi;borreliella burgdorferi
36;16
16;7
0.84;0.88
HL
train
9c1s_H_L
9c1s
fab f946 in complex with ospc type a
no
immune system/antigen
2024-05-29
2025-08-27
x-ray diffraction
2.6
0.251
0.196
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV4
IGKV1
H
L
QVQLQESGPGLVKPSGTLSLTCTVSGASISVGNWWSWVRQPPGKGLEWIGEFYHSGKTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARSDLLTGYFPYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTH
DIQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQRLNSYPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLQESGPGLVKPSGTLSLTCTVSGASISVGNWWSWVRQPPGKGLEWIGEFYHSGKTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCARSDLLTGYFPYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
IQLTQSPSFLSASVGDRVTITCRASQGISSYLAWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTEFTLTISSLQPEDFATYYCQRLNSYPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
21.831568
23.03833
230
214
217
213
223
213
99
f946 fab heavy chain
f946 fab light chain
homo sapiens
homo sapiens
C;D
protein;protein
outer surface protein c;outer surface protein c
borreliella burgdorferi;borreliella burgdorferi
17;37
8;19
0.89;0.9
HL
train
8zpl_N
8zpl
cryo-em strucutre of cxcr4 complexed with antagonist hf51116
no
signaling protein
2024-05-30
2025-02-26
electron microscopy
3.01
N.A.
N.A.
40063796
10.1073/pnas.2425795122
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFAMAQVQLQESGGGLVQAGESLRLSCAASGTIFRLYDMGWYRRVSGNQRELVASITSGGSTKYGDSVKGRFTISRDNAKNTVYLQMSSLKPEDTAVYYCNAEYRTGIWEELLDGWGQGTQVTVSSHHHHHHHH
N.A.
QVQLQESGGGLVQAGESLRLSCAASGTIFRLYDMGWYRRVSGNQRELVASITSGGSTKYGDSVKGRFTISRDNAKNTVYLQMSSLKPEDTAVYYCNAEYRTGIWEELLDGWGQGTQVTVSS
N.A.
14.711162
0
169
0
116
0
121
0
0
nb6 nanobody
N.A.
lama glama
N.A.
R
protein
soluble cytochrome b562,c-x-c chemokine receptor type 4
escherichia coli
25
12
1
H_only
train
8zpm_N
8zpm
cryo-em strucutre of cxcr4 complexed with antagonist amd070
no
signaling protein
2024-05-30
2025-02-26
electron microscopy
3.2
N.A.
N.A.
40063796
10.1073/pnas.2425795122
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFAMAQVQLQESGGGLVQAGESLRLSCAASGTIFRLYDMGWYRRVSGNQRELVASITSGGSTKYGDSVKGRFTISRDNAKNTVYLQMSSLKPEDTAVYYCNAEYRTGIWEELLDGWGQGTQVTVSSHHHHHHHH
N.A.
QVQLQESGGGLVQAGESLRLSCAASGTIFRLYDMGWYRRVSGNQRELVASITSGGSTKYGDSVKGRFTISRDNAKNTVYLQMSSLKPEDTAVYYCNAEYRTGIWEELLDGWGQGTQVTVSS
N.A.
14.78814
0
169
0
116
0
121
0
0
nb6 nanobody
N.A.
lama glama
N.A.
R
protein
soluble cytochrome b562,c-x-c chemokine receptor type 4
escherichia coli
25
12
1
H_only
train
8zpn_N
8zpn
cryo-em strucutre of cxcr4 complexed with antagonist amd3100
no
signaling protein
2024-05-30
2025-02-26
electron microscopy
3.31
N.A.
N.A.
40063796
10.1073/pnas.2425795122
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFAMAQVQLQESGGGLVQAGESLRLSCAASGTIFRLYDMGWYRRVSGNQRELVASITSGGSTKYGDSVKGRFTISRDNAKNTVYLQMSSLKPEDTAVYYCNAEYRTGIWEELLDGWGQGTQVTVSSHHHHHHHH
N.A.
QVQLQESGGGLVQAGESLRLSCAASGTIFRLYDMGWYRRVSGNQRELVASITSGGSTKYGDSVKGRFTISRDNAKNTVYLQMSSLKPEDTAVYYCNAEYRTGIWEELLDGWGQGTQVTVSS
N.A.
14.856289
0
169
0
116
0
121
0
0
nb6 nanobody
N.A.
lama glama
N.A.
R
protein
soluble cytochrome b562,c-x-c chemokine receptor type 4
escherichia coli
26
11
0.79
H_only
train
9c22_E_D
9c22
crystal structure of chimeric hemagglutinin ch11/1 in complex with broad protective antibody 3e1
no
viral protein/immune system
2024-05-30
2025-05-07
x-ray diffraction
4.6
0.325
0.293
39937865
10.1073/pnas.2416628122
0
auth_asym_id
FabH:FabL
IGHV4
IGKV1
E
D
QVQLQESGPGLVKPSETLSLTCSVSGASISSYYWIWIRQPAGKGLEWIGRFYTSGSPNYNPSLRSRVTMSVDTSKNQFSLKLTSVTAADTAVYYCAREEHITFGGVIVRYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
DIQMTQSPATLSASVGDRVSITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGSEFTLTISSLQPDDFAIYYCQQYNSYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLQESGPGLVKPSETLSLTCSVSGASISSYYWIWIRQPAGKGLEWIGRFYTSGSPNYNPSLRSRVTMSVDTSKNQFSLKLTSVTAADTAVYYCAREEHITFGGVIVRYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
DIQMTQSPATLSASVGDRVSITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGSEFTLTISSLQPDDFAIYYCQQYNSYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
21.275679
23.210085
224
214
221
212
221
212
100
antibody 3e1 fab heavy chain
antibody 3e1 fab light chain
homo sapiens
homo sapiens
B
protein
hemagglutinin
influenza a virus
36
18
0.95
HL
train
9c22_N_M
9c22
crystal structure of chimeric hemagglutinin ch11/1 in complex with broad protective antibody 3e1
no
viral protein/immune system
2024-05-30
2025-05-07
x-ray diffraction
4.6
0.325
0.293
39937865
10.1073/pnas.2416628122
0
auth_asym_id
FabH:FabL
IGHV4
IGKV1
N
M
QVQLQESGPGLVKPSETLSLTCSVSGASISSYYWIWIRQPAGKGLEWIGRFYTSGSPNYNPSLRSRVTMSVDTSKNQFSLKLTSVTAADTAVYYCAREEHITFGGVIVRYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
DIQMTQSPATLSASVGDRVSITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGSEFTLTISSLQPDDFAIYYCQQYNSYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLQESGPGLVKPSETLSLTCSVSGASISSYYWIWIRQPAGKGLEWIGRFYTSGSPNYNPSLRSRVTMSVDTSKNQFSLKLTSVTAADTAVYYCAREEHITFGGVIVRYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
DIQMTQSPATLSASVGDRVSITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGSEFTLTISSLQPDDFAIYYCQQYNSYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
21.06127
23.301708
224
214
221
212
221
212
103
antibody 3e1 fab heavy chain
antibody 3e1 fab light chain
homo sapiens
homo sapiens
H
protein
hemagglutinin
influenza a virus
41
19
0.95
HL
train
9c22_K_J
9c22
crystal structure of chimeric hemagglutinin ch11/1 in complex with broad protective antibody 3e1
no
viral protein/immune system
2024-05-30
2025-05-07
x-ray diffraction
4.6
0.325
0.293
39937865
10.1073/pnas.2416628122
0
auth_asym_id
FabH:FabL
IGHV4
IGKV1
K
J
QVQLQESGPGLVKPSETLSLTCSVSGASISSYYWIWIRQPAGKGLEWIGRFYTSGSPNYNPSLRSRVTMSVDTSKNQFSLKLTSVTAADTAVYYCAREEHITFGGVIVRYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
DIQMTQSPATLSASVGDRVSITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGSEFTLTISSLQPDDFAIYYCQQYNSYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLQESGPGLVKPSETLSLTCSVSGASISSYYWIWIRQPAGKGLEWIGRFYTSGSPNYNPSLRSRVTMSVDTSKNQFSLKLTSVTAADTAVYYCAREEHITFGGVIVRYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
DIQMTQSPATLSASVGDRVSITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGSEFTLTISSLQPDDFAIYYCQQYNSYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
20.982698
23.226234
224
214
221
212
221
212
101
antibody 3e1 fab heavy chain
antibody 3e1 fab light chain
homo sapiens
homo sapiens
I
protein
hemagglutinin
influenza a virus
44
19
0.9
HL
train
9c22_S_R
9c22
crystal structure of chimeric hemagglutinin ch11/1 in complex with broad protective antibody 3e1
no
viral protein/immune system
2024-05-30
2025-05-07
x-ray diffraction
4.6
0.325
0.293
39937865
10.1073/pnas.2416628122
0
auth_asym_id
FabH:FabL
IGHV4
IGKV1
S
R
QVQLQESGPGLVKPSETLSLTCSVSGASISSYYWIWIRQPAGKGLEWIGRFYTSGSPNYNPSLRSRVTMSVDTSKNQFSLKLTSVTAADTAVYYCAREEHITFGGVIVRYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
DIQMTQSPATLSASVGDRVSITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGSEFTLTISSLQPDDFAIYYCQQYNSYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLQESGPGLVKPSETLSLTCSVSGASISSYYWIWIRQPAGKGLEWIGRFYTSGSPNYNPSLRSRVTMSVDTSKNQFSLKLTSVTAADTAVYYCAREEHITFGGVIVRYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
DIQMTQSPATLSASVGDRVSITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGSEFTLTISSLQPDDFAIYYCQQYNSYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
21.140396
23.23787
224
214
221
212
221
212
103
antibody 3e1 fab heavy chain
antibody 3e1 fab light chain
homo sapiens
homo sapiens
P
protein
hemagglutinin
influenza a virus
40
20
0.95
HL
train
9c22_X_W
9c22
crystal structure of chimeric hemagglutinin ch11/1 in complex with broad protective antibody 3e1
no
viral protein/immune system
2024-05-30
2025-05-07
x-ray diffraction
4.6
0.325
0.293
39937865
10.1073/pnas.2416628122
0
auth_asym_id
FabH:FabL
IGHV4
IGKV1
X
W
QVQLQESGPGLVKPSETLSLTCSVSGASISSYYWIWIRQPAGKGLEWIGRFYTSGSPNYNPSLRSRVTMSVDTSKNQFSLKLTSVTAADTAVYYCAREEHITFGGVIVRYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
DIQMTQSPATLSASVGDRVSITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGSEFTLTISSLQPDDFAIYYCQQYNSYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLQESGPGLVKPSETLSLTCSVSGASISSYYWIWIRQPAGKGLEWIGRFYTSGSPNYNPSLRSRVTMSVDTSKNQFSLKLTSVTAADTAVYYCAREEHITFGGVIVRYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
DIQMTQSPATLSASVGDRVSITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGSEFTLTISSLQPDDFAIYYCQQYNSYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
21.270134
23.151276
224
214
221
211
221
212
114
antibody 3e1 fab heavy chain
antibody 3e1 fab light chain
homo sapiens
homo sapiens
U
protein
hemagglutinin
influenza a virus
37
19
0.95
HL
train
9c22_d_c
9c22
crystal structure of chimeric hemagglutinin ch11/1 in complex with broad protective antibody 3e1
no
viral protein/immune system
2024-05-30
2025-05-07
x-ray diffraction
4.6
0.325
0.293
39937865
10.1073/pnas.2416628122
0
auth_asym_id
FabH:FabL
IGHV4
IGKV1
d
c
QVQLQESGPGLVKPSETLSLTCSVSGASISSYYWIWIRQPAGKGLEWIGRFYTSGSPNYNPSLRSRVTMSVDTSKNQFSLKLTSVTAADTAVYYCAREEHITFGGVIVRYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
DIQMTQSPATLSASVGDRVSITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGSEFTLTISSLQPDDFAIYYCQQYNSYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLQESGPGLVKPSETLSLTCSVSGASISSYYWIWIRQPAGKGLEWIGRFYTSGSPNYNPSLRSRVTMSVDTSKNQFSLKLTSVTAADTAVYYCAREEHITFGGVIVRYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
DIQMTQSPATLSASVGDRVSITCRASQSISSWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSGSEFTLTISSLQPDDFAIYYCQQYNSYPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
20.998981
23.326122
224
214
221
212
221
212
100
antibody 3e1 fab heavy chain
antibody 3e1 fab light chain
homo sapiens
homo sapiens
a
protein
hemagglutinin
influenza a virus
41
19
0.9
HL
train
9fjk_H_L
9fjk
omicron ba.1 spike protein with neutralizing ntd specific mab k501sp6
yes
viral protein
2024-05-31
2024-08-14
electron microscopy
2.84
N.A.
N.A.
39354108
10.1038/s42003-024-06951-7
0
auth_asym_id
VH:VL
IGHV4
IGLV1
H
L
QVQLQESGPGLVKPSETLSLTCTVSGGSISSRSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKMNSMTAADTAVYYCARLRGDEIYYESSGYYSYFDYWGQGTLVTVSS
WAQSALTQPPSVSGAPGQRVAISCTGSSANIGTADDVHWYQQLPRTAPKLLIYGNNNRPSGVPDRFSGSQSGTSASLVITGLQPEDEADYFCQSYDSSLSGYVFGTGTKVTVLGQPKAAPSVTLFPPSSEELQA
QVQLQESGPGLVKPSETLSLTCTVSGGSISSRSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKMNSMTAADTAVYYCARLRGDEIYYESSGYYSYFDYWGQGTLVTVSS
QSALTQPPSVSGAPGQRVAISCTGSSANIGTADDVHWYQQLPRTAPKLLIYGNNNRPSGVPDRFSGSQSGTSASLVITGLQPEDEADYFCQSYDSSLSGYVFGTGTKVTVL
14.780912
13.475857
129
134
129
111
129
111
44
k501sp6 fv heavy chain
k501sp6 fv light chain
homo sapiens
homo sapiens
A;B
protein;protein
spike glycoprotein,fibritin;spike glycoprotein,fibritin
severe acute respiratory syndrome coronavirus 2;severe acute respiratory syndrome coronavirus 2
43;37
20;17
0.91;0.81
HL
train
8zps_E
8zps
cryo-em structure of prolactin-releasing peptide recognition with gi
yes
membrane protein
2024-05-31
2024-09-25
electron microscopy
2.97
N.A.
N.A.
39223120
10.1038/s41421-024-00724-6
0
auth_asym_id
scFv
N.A.
N.A.
E
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKL
N.A.
17.33589
0
247
0
228
0
245
0
0
scfv16
N.A.
homo sapiens
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(s) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
33;26
19;10
0.86;0.77
H_only
train
8zpt_E
8zpt
cryo-em structure of prolactin-releasing peptide recognition with gq
yes
membrane protein
2024-05-31
2024-09-25
electron microscopy
2.96
N.A.
N.A.
39223120
10.1038/s41421-024-00724-6
0
auth_asym_id
scFv
N.A.
N.A.
E
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.399002
0
247
0
232
0
247
0
0
scfv16
N.A.
homo sapiens
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(324) subunit alpha-1,;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
27;27
16;12
0.89;0.8
H_only
train
9c2h_E_F
9c2h
sars-cov-2 nucleocapsid dimerization domain bound to fab-np1e9 and fab-np3b4
no
viral protein
2024-05-31
2025-05-14
electron microscopy
3.7
N.A.
N.A.
40664703
10.1038/s41467-025-61861-4
0
auth_asym_id
VH:VL
IGHV1
IGKV1
E
F
QVQLQQSGPELVKPGTLVKISCKASGYTFTSYDINWVKQRPGQGLEWIGWIYPGDGSTKYNEKFKGKATLTADTSSSTAYMQLNSLTSENSAVYFCARGLVGAMDYWGQGTSVTV
DIVMTQSQKFMSTSVGDRVSVTCKASQNVLNNVAWYQQKPGQSPKALIYSASYRYSGVPDRFTGSGSGTDFTLTISNVQSEDLAEYFCQQYNSYPLTFGDGTKLELK
QVQLQQSGPELVKPGTLVKISCKASGYTFTSYDINWVKQRPGQGLEWIGWIYPGDGSTKYNEKFKGKATLTADTSSSTAYMQLNSLTSENSAVYFCARGLVGAMDYWGQGTSVTV
DIVMTQSQKFMSTSVGDRVSVTCKASQNVLNNVAWYQQKPGQSPKALIYSASYRYSGVPDRFTGSGSGTDFTLTISNVQSEDLAEYFCQQYNSYPLTFGDGTKLELK
13.619756
13.413242
115
107
115
107
115
107
39
antibody fab np1-e9 heavy chain (variable region)
antibody fab np1-e9 light chain (variable region)
mus sp.
mus sp.
A
protein
nucleoprotein
severe acute respiratory syndrome coronavirus 2
46
19
0.76
HL
train
9c2h_G_H
9c2h
sars-cov-2 nucleocapsid dimerization domain bound to fab-np1e9 and fab-np3b4
no
viral protein
2024-05-31
2025-05-14
electron microscopy
3.7
N.A.
N.A.
40664703
10.1038/s41467-025-61861-4
0
auth_asym_id
VH:VL
IGHV3
IGKV1
G
H
EVQLVESGGGLVQPGGSVKLSCLASGFTFSDYYMSWVRQSPEKGLEWVAEIRLESDNYATHYAESVKGKFTISRDDSKSRLYLKMNSLRGEDTGIYYCAFDVYYGGAMDYWGQGTTVTVEVQLVESGGGLVQPGGSVKLSCLASGFTFSDYYMSWVRQSPEKGLEWVAEIRLESDNYATHYAESVKGKFTISRDDSKSRLYLKMNSLRGEDTGIYYCAFDVYYGGAMDYWGQGTTVTV
CDIQMTQSPSIMSASPGEKVTMTCSASSSVSYMHWYQQKSSTSPKLWIYDTSELASGVPGRFSGSRSGNSYSLTISSMEAEDVATYYCFQGSGYPLTFGGGTKLELK
EVQLVESGGGLVQPGGSVKLSCLASGFTFSDYYMSWVRQSPEKGLEWVAEIRLESDNYATHYAESVKGKFTISRDDSKSRLYLKMNSLRGEDTGIYYCAFDVYYGGAMDYWGQGTTVTV
DIQMTQSPSIMSASPGEKVTMTCSASSSVSYMHWYQQKSSTSPKLWIYDTSELASGVPGRFSGSRSGNSYSLTISSMEAEDVATYYCFQGSGYPLTFGGGTKLELK
13.877111
13.261132
238
107
119
106
119
106
35
antibody fab np3-b4 heavy chain (variable region)
antibody fab np3-b4 light chain (variable region)
mus sp.
mus sp.
A
protein
nucleoprotein
severe acute respiratory syndrome coronavirus 2
48
22
0.85
HL
train
9c2h_B_C
9c2h
sars-cov-2 nucleocapsid dimerization domain bound to fab-np1e9 and fab-np3b4
no
viral protein
2024-05-31
2025-05-14
electron microscopy
3.7
N.A.
N.A.
40664703
10.1038/s41467-025-61861-4
0
auth_asym_id
VH:VL
IGHV3
IGKV1
B
C
EVQLVESGGGLVQPGGSVKLSCLASGFTFSDYYMSWVRQSPEKGLEWVAEIRLESDNYATHYAESVKGKFTISRDDSKSRLYLKMNSLRGEDTGIYYCAFDVYYGGAMDYWGQGTTVTVEVQLVESGGGLVQPGGSVKLSCLASGFTFSDYYMSWVRQSPEKGLEWVAEIRLESDNYATHYAESVKGKFTISRDDSKSRLYLKMNSLRGEDTGIYYCAFDVYYGGAMDYWGQGTTVTV
CDIQMTQSPSIMSASPGEKVTMTCSASSSVSYMHWYQQKSSTSPKLWIYDTSELASGVPGRFSGSRSGNSYSLTISSMEAEDVATYYCFQGSGYPLTFGGGTKLELK
EVQLVESGGGLVQPGGSVKLSCLASGFTFSDYYMSWVRQSPEKGLEWVAEIRLESDNYATHYAESVKGKFTISRDDSKSRLYLKMNSLRGEDTGIYYCAFDVYYGGAMDYWGQGTTVTV
DIQMTQSPSIMSASPGEKVTMTCSASSSVSYMHWYQQKSSTSPKLWIYDTSELASGVPGRFSGSRSGNSYSLTISSMEAEDVATYYCFQGSGYPLTFGGGTKLELK
13.941724
13.266562
238
107
119
106
119
106
38
antibody fab np3-b4 heavy chain (variable region)
antibody fab np3-b4 light chain (variable region)
mus sp.
mus sp.
D
protein
nucleoprotein
severe acute respiratory syndrome coronavirus 2
47
22
0.88
HL
train
9c2h_I_J
9c2h
sars-cov-2 nucleocapsid dimerization domain bound to fab-np1e9 and fab-np3b4
no
viral protein
2024-05-31
2025-05-14
electron microscopy
3.7
N.A.
N.A.
40664703
10.1038/s41467-025-61861-4
0
auth_asym_id
VH:VL
IGHV1
IGKV1
I
J
QVQLQQSGPELVKPGTLVKISCKASGYTFTSYDINWVKQRPGQGLEWIGWIYPGDGSTKYNEKFKGKATLTADTSSSTAYMQLNSLTSENSAVYFCARGLVGAMDYWGQGTSVTV
DIVMTQSQKFMSTSVGDRVSVTCKASQNVLNNVAWYQQKPGQSPKALIYSASYRYSGVPDRFTGSGSGTDFTLTISNVQSEDLAEYFCQQYNSYPLTFGDGTKLELK
QVQLQQSGPELVKPGTLVKISCKASGYTFTSYDINWVKQRPGQGLEWIGWIYPGDGSTKYNEKFKGKATLTADTSSSTAYMQLNSLTSENSAVYFCARGLVGAMDYWGQGTSVTV
DIVMTQSQKFMSTSVGDRVSVTCKASQNVLNNVAWYQQKPGQSPKALIYSASYRYSGVPDRFTGSGSGTDFTLTISNVQSEDLAEYFCQQYNSYPLTFGDGTKLELK
13.505219
13.355012
115
107
115
107
115
107
40
antibody fab np1-e9 heavy chain (variable region)
antibody fab np1-e9 light chain (variable region)
mus sp.
mus sp.
D
protein
nucleoprotein
severe acute respiratory syndrome coronavirus 2
46
20
0.83
HL
train
8zpq_A_B
8zpq
crystal structure of sars-cov-2-bq1.1-rbd and 70fab
yes
viral protein/immune system
2024-05-31
2025-06-11
x-ray diffraction
2.75
0.281
0.234
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV3
IGLV3
A
B
DEVQLVESGGGLVQPRGSLRLSCSASGFTFSTYAMHWVRQAPGKGLEYVSGISVNGDSTNYAESVKGRFTISRDNSKNTLFLEMRSLKVEDTAVYYCVKDKMGYPTGEYFPHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
DQSVLTQPPSVSVAPGKTARITCGGNDIGSKSVHWYQQKPGQAPVLVIYYDTDRPSGIPDRFSGSNSGNTATLTISGVEAGDEADYYCQVWDGTSDHHVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
EVQLVESGGGLVQPRGSLRLSCSASGFTFSTYAMHWVRQAPGKGLEYVSGISVNGDSTNYAESVKGRFTISRDNSKNTLFLEMRSLKVEDTAVYYCVKDKMGYPTGEYFPHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
DQSVLTQPPSVSVAPGKTARITCGGNDIGSKSVHWYQQKPGQAPVLVIYYDTDRPSGIPDRFSGSNSGNTATLTISGVEAGDEADYYCQVWDGTSDHHVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP
23.269836
22.86004
228
216
216
212
223
212
91
70fab-h
70fab-l
homo sapiens
homo sapiens
E
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
57
22
0.76
HL
train
8zpq_H_L
8zpq
crystal structure of sars-cov-2-bq1.1-rbd and 70fab
yes
viral protein/immune system
2024-05-31
2025-06-11
x-ray diffraction
2.75
0.281
0.234
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV3
IGLV3
H
L
DEVQLVESGGGLVQPRGSLRLSCSASGFTFSTYAMHWVRQAPGKGLEYVSGISVNGDSTNYAESVKGRFTISRDNSKNTLFLEMRSLKVEDTAVYYCVKDKMGYPTGEYFPHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
DQSVLTQPPSVSVAPGKTARITCGGNDIGSKSVHWYQQKPGQAPVLVIYYDTDRPSGIPDRFSGSNSGNTATLTISGVEAGDEADYYCQVWDGTSDHHVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
DEVQLVESGGGLVQPRGSLRLSCSASGFTFSTYAMHWVRQAPGKGLEYVSGISVNGDSTNYAESVKGRFTISRDNSKNTLFLEMRSLKVEDTAVYYCVKDKMGYPTGEYFPHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS
QSVLTQPPSVSVAPGKTARITCGGNDIGSKSVHWYQQKPGQAPVLVIYYDTDRPSGIPDRFSGSNSGNTATLTISGVEAGDEADYYCQVWDGTSDHHVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTE
23.97478
22.476269
228
216
220
213
225
213
88
70fab-h
70fab-l
homo sapiens
homo sapiens
F
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
60
25
0.81
HL
train
9fkd_H_L
9fkd
progesterone-bound db3 fab in complex with computationally designed dbpro1156_2 protein binder
no
de novo protein
2024-06-03
2024-10-30
electron microscopy
3.3
N.A.
N.A.
39814890
10.1038/s41586-024-08435-4
0
auth_asym_id
FabH:FabL
IGHV7
IGKV2
H
L
ETGQIQLVQSGPELKKPGETVKISCKASGYAFTNYGVNWVKEAPGKELKWMGWINIYTGEPTYVDDFKGRFAFSLETSASTAYLEINNLKNEDTATYFCTRGDYVNWYFDVWGAGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTGTKHHHHHH
ETGDVVMTQIPLSLPVSLGEQASISCRSSQSLIHSNGNTYLHWYLQKPGQSPKLLMYKVSNRFYGVPDRFSGSGSGTDFTLKISRVEAEDLGIYFCSQSSHVPPTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
GQIQLVQSGPELKKPGETVKISCKASGYAFTNYGVNWVKEAPGKELKWMGWINIYTGEPTYVDDFKGRFAFSLETSASTAYLEINNLKNEDTATYFCTRGDYVNWYFDVWGAGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
GDVVMTQIPLSLPVSLGEQASISCRSSQSLIHSNGNTYLHWYLQKPGQSPKLLMYKVSNRFYGVPDRFSGSGSGTDFTLKISRVEAEDLGIYFCSQSSHVPPTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
23.641014
24.04409
239
222
218
220
224
220
85
db3 fab heavy chain
db3 fab light chain
synthetic construct
synthetic construct
B
protein
de novo designed dbpro1156_2 binder
synthetic construct
27
12
0.86
HL
train
9fkd_I_K
9fkd
progesterone-bound db3 fab in complex with computationally designed dbpro1156_2 protein binder
no
de novo protein
2024-06-03
2024-10-30
electron microscopy
3.3
N.A.
N.A.
39814890
10.1038/s41586-024-08435-4
0
auth_asym_id
FabH:FabL
IGHV3
IGKV3
I
K
ETGEVKLLESGGGLVQPGRSLRLSCIASGFDFSGYWMTWVRQAPGKGLEWIGDINPDSSTINSTPSLKDKVIISRDNAKNTLFLQMSKVRSEDTALYYCAQRGNYVPFPYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGCKGTKHHHHHH
ETGSIVMTQTPKFLFVSAGDRVTITCKASQSVSNDVEWYQQKPGQSPKLMIYFASKRYNGVPDRFTGSGFGTEFTFTISTVQAEDLAVYFCQQDYSSPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRGEC
GEVKLLESGGGLVQPGRSLRLSCIASGFDFSGYWMTWVRQAPGKGLEWIGDINPDSSTINSTPSLKDKVIISRDNAKNTLFLQMSKVRSEDTALYYCAQRGNYVPFPYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC
GSIVMTQTPKFLFVSAGDRVTITCKASQSVSNDVEWYQQKPGQSPKLMIYFASKRYNGVPDRFTGSGFGTEFTFTISTVQAEDLAVYFCQQDYSSPWTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRGEC
21.854078
23.862928
235
217
221
212
221
215
88
anti-kappa fab heavy chain
anti-kappa fab light chain
synthetic construct
synthetic construct
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
8zr4_A_B
8zr4
cryo-em structure of the n2-4n2c402 complex at a resolution of 1.9 angstrom
no
viral protein/immune system
2024-06-03
2025-01-01
electron microscopy
1.9
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV3
IGKV2
A
B
QGRLQESGGGVVQPRRSLTLSCAASGFTLETYTMHWVRQTPGKGLEWVAVSSKDGNNVYYRDSVKGRFTVSRDNSKNTLFLQMNHLRAEDTALYYCARGSDPDYDKGWGAYRNTDRPSYDGLDVWGQGTTVTVSS
DIVMTQSPLFLSVTPGESASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYWGSNRASGVSDRFSGRGSGTDFTLTIYNVEAEDVGVYYCMQALQTPPWTFGQGTKVDIK
GRLQESGGGVVQPRRSLTLSCAASGFTLETYTMHWVRQTPGKGLEWVAVSSKDGNNVYYRDSVKGRFTVSRDNSKNTLFLQMNHLRAEDTALYYCARGSDPDYDKGWGAYRNTDRPSYDGLDVWGQGTTVTV
IVMTQSPLFLSVTPGESASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYWGSNRASGVSDRFSGRGSGTDFTLTIYNVEAEDVGVYYCMQALQTPPWTFGQGTKVDI
14.540812
13.275906
135
113
126
111
132
111
54
4n2c402_fab_h
4n2c402_fab_l
homo sapiens
homo sapiens
D
protein
neuraminidase
influenza a virus
49
20
1
HL
train
8zr4_F_G
8zr4
cryo-em structure of the n2-4n2c402 complex at a resolution of 1.9 angstrom
no
viral protein/immune system
2024-06-03
2025-01-01
electron microscopy
1.9
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV3
IGKV2
F
G
QGRLQESGGGVVQPRRSLTLSCAASGFTLETYTMHWVRQTPGKGLEWVAVSSKDGNNVYYRDSVKGRFTVSRDNSKNTLFLQMNHLRAEDTALYYCARGSDPDYDKGWGAYRNTDRPSYDGLDVWGQGTTVTVSS
DIVMTQSPLFLSVTPGESASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYWGSNRASGVSDRFSGRGSGTDFTLTIYNVEAEDVGVYYCMQALQTPPWTFGQGTKVDIK
GRLQESGGGVVQPRRSLTLSCAASGFTLETYTMHWVRQTPGKGLEWVAVSSKDGNNVYYRDSVKGRFTVSRDNSKNTLFLQMNHLRAEDTALYYCARGSDPDYDKGWGAYRNTDRPSYDGLDVWGQGTTVT
IVMTQSPLFLSVTPGESASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYWGSNRASGVSDRFSGRGSGTDFTLTIYNVEAEDVGVYYCMQALQTPPWTFGQGTKVD
14.492825
13.1988
135
113
125
110
131
110
53
4n2c402_fab_h
4n2c402_fab_l
homo sapiens
homo sapiens
H
protein
neuraminidase
influenza a virus
55
23
0.96
HL
train
8zr4_I_J
8zr4
cryo-em structure of the n2-4n2c402 complex at a resolution of 1.9 angstrom
no
viral protein/immune system
2024-06-03
2025-01-01
electron microscopy
1.9
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV3
IGKV2
I
J
QGRLQESGGGVVQPRRSLTLSCAASGFTLETYTMHWVRQTPGKGLEWVAVSSKDGNNVYYRDSVKGRFTVSRDNSKNTLFLQMNHLRAEDTALYYCARGSDPDYDKGWGAYRNTDRPSYDGLDVWGQGTTVTVSS
DIVMTQSPLFLSVTPGESASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYWGSNRASGVSDRFSGRGSGTDFTLTIYNVEAEDVGVYYCMQALQTPPWTFGQGTKVDIK
GRLQESGGGVVQPRRSLTLSCAASGFTLETYTMHWVRQTPGKGLEWVAVSSKDGNNVYYRDSVKGRFTVSRDNSKNTLFLQMNHLRAEDTALYYCARGSDPDYDKGWGAYRNTDRPSYDGLDVWGQGTTVTV
IVMTQSPLFLSVTPGESASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYWGSNRASGVSDRFSGRGSGTDFTLTIYNVEAEDVGVYYCMQALQTPPWTFGQGTKVD
14.541842
13.197938
135
113
126
110
132
110
53
4n2c402_fab_h
4n2c402_fab_l
homo sapiens
homo sapiens
K
protein
neuraminidase
influenza a virus
56
24
0.96
HL
train
8zr4_L_M
8zr4
cryo-em structure of the n2-4n2c402 complex at a resolution of 1.9 angstrom
no
viral protein/immune system
2024-06-03
2025-01-01
electron microscopy
1.9
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV3
IGKV2
L
M
QGRLQESGGGVVQPRRSLTLSCAASGFTLETYTMHWVRQTPGKGLEWVAVSSKDGNNVYYRDSVKGRFTVSRDNSKNTLFLQMNHLRAEDTALYYCARGSDPDYDKGWGAYRNTDRPSYDGLDVWGQGTTVTVSS
DIVMTQSPLFLSVTPGESASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYWGSNRASGVSDRFSGRGSGTDFTLTIYNVEAEDVGVYYCMQALQTPPWTFGQGTKVDIK
GRLQESGGGVVQPRRSLTLSCAASGFTLETYTMHWVRQTPGKGLEWVAVSSKDGNNVYYRDSVKGRFTVSRDNSKNTLFLQMNHLRAEDTALYYCARGSDPDYDKGWGAYRNTDRPSYDGLDVWGQGTTVTV
IVMTQSPLFLSVTPGESASISCRSSQSLLHSNGYNYLDWYLQKPGQSPQLLIYWGSNRASGVSDRFSGRGSGTDFTLTIYNVEAEDVGVYYCMQALQTPPWTFGQGTKVD
14.541827
13.198327
135
113
126
110
132
110
53
4n2c402_fab_h
4n2c402_fab_l
homo sapiens
homo sapiens
N
protein
neuraminidase
influenza a virus
56
24
0.96
HL
train
9fkn_B
9fkn
human monocarboxylate transporter 8 bound to thyroxine
no
transport protein
2024-06-03
2025-05-21
electron microscopy
3.4
N.A.
N.A.
40368961
10.1038/s41467-025-59751-w
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
GSEVQLQESGGGLVQPGGSLRLSCTASGVTISALNAMAMGWYRQAPGERRVMVAAVSERGNAMYRESVQGRFTVTRDFTNKMVSLQMDNLKPEDTAVYYCHVLEDRVDSFHDYWGQGTQVTVSS
N.A.
VQLQESGGGLVQPGGSLRLSCTASGVTISALNAMAMGWYRQAPGERRVMVAAVSERGNAMYRESVQGRFTVTRDFTNKMVSLQMDNLKPEDTAVYYCHVLEDRVDSFHDYWGQGTQVTVSS
N.A.
14.233604
0
124
0
121
0
121
0
0
alfa-tag nanobody
N.A.
vicugna pacos
N.A.
A
protein
monocarboxylate transporter 8
homo sapiens
42
12
0.48
H_only
train
8zr5_N
8zr5
cryo-em structure of gpr119-gs-firuglipel complex
no
membrane protein
2024-06-04
2024-06-19
electron microscopy
3.31
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
MKYLLPTAAAGLLLLAAQPAMAMQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHH
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS
N.A.
14.014444
0
157
0
128
0
128
0
0
nanobody 35
N.A.
synthetic construct
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
41;31
11;11
0.55;0.69
H_only
train
8zrk_N
8zrk
cryo-em structure of gpr119-gs complex with small molecule agonist gsk-1292263
no
membrane protein
2024-06-04
2024-06-19
electron microscopy
2.82
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
MKYLLPTAAAGLLLLAAQPAMAMQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHH
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS
N.A.
13.997582
0
157
0
128
0
128
0
0
nanobody35
N.A.
synthetic construct
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
40;29
12;12
0.6;0.86
H_only
train
8zre_h_l
8zre
hbcag-d4 fab complex
no
virus like particle
2024-06-04
2024-11-13
electron microscopy
3.44
N.A.
N.A.
39601613
10.1128/jvi.01694-24
0
auth_asym_id
VH:VL
IGHV3
IGKV2
h
l
QVQLVESGGGVVQPGRSLRLSCAASGFNFNKFGMHWVRQVPGKGLEWLTYIWYDGSNADYVDSVKGRFTISRDNSINTLYLQMNSLRADDTAVYFCARGFYDSSSLESWGQGALVIVSSAS
DIVMTQSPLSLAVTPGEPASISCRSSQTLLHNNGYNYFSWYLQKPGQAPQLLIYLGSNRAPGVSDRFSGSGSGTSFTLEISRVEAEDVGVYYCMQGRHTPWTFGQGTKVEIKRT
QVQLVESGGGVVQPGRSLRLSCAASGFNFNKFGMHWVRQVPGKGLEWLTYIWYDGSNADYVDSVKGRFTISRDNSINTLYLQMNSLRADDTAVYFCARGFYDSSSLESWGQGALVIVSSAS
DIVMTQSPLSLAVTPGEPASISCRSSQTLLHNNGYNYFSWYLQKPGQAPQLLIYLGSNRAPGVSDRFSGSGSGTSFTLEISRVEAEDVGVYYCMQGRHTPWTFGQGTKVEIKRT
14.47187
14.49916
121
114
121
114
121
114
40
heavy chains of d4 fab
light chains of d4 fab
homo sapiens
homo sapiens
A;B
protein;protein
capsid protein;capsid protein
hepatitis b virus genotype c;hepatitis b virus genotype c
19;14
10;8
0.91;1.0
HL
train
8zre_H_L
8zre
hbcag-d4 fab complex
no
virus like particle
2024-06-04
2024-11-13
electron microscopy
3.44
N.A.
N.A.
39601613
10.1128/jvi.01694-24
0
auth_asym_id
VH:VL
IGHV3
IGKV2
H
L
QVQLVESGGGVVQPGRSLRLSCAASGFNFNKFGMHWVRQVPGKGLEWLTYIWYDGSNADYVDSVKGRFTISRDNSINTLYLQMNSLRADDTAVYFCARGFYDSSSLESWGQGALVIVSSAS
DIVMTQSPLSLAVTPGEPASISCRSSQTLLHNNGYNYFSWYLQKPGQAPQLLIYLGSNRAPGVSDRFSGSGSGTSFTLEISRVEAEDVGVYYCMQGRHTPWTFGQGTKVEIKRT
QVQLVESGGGVVQPGRSLRLSCAASGFNFNKFGMHWVRQVPGKGLEWLTYIWYDGSNADYVDSVKGRFTISRDNSINTLYLQMNSLRADDTAVYFCARGFYDSSSLESWGQGALVIVSSAS
DIVMTQSPLSLAVTPGEPASISCRSSQTLLHNNGYNYFSWYLQKPGQAPQLLIYLGSNRAPGVSDRFSGSGSGTSFTLEISRVEAEDVGVYYCMQGRHTPWTFGQGTKVEIKRT
14.471849
14.49917
121
114
121
114
121
114
40
heavy chains of d4 fab
light chains of d4 fab
homo sapiens
homo sapiens
C;D
protein;protein
capsid protein;capsid protein
hepatitis b virus genotype c;hepatitis b virus genotype c
17;18
10;9
1.0;0.9
HL
train
8zrh_h_l
8zrh
hbcag-d4 fab complex
no
viral protein/immune system
2024-06-04
2024-11-13
electron microscopy
3.6
N.A.
N.A.
39601613
10.1128/jvi.01694-24
0
auth_asym_id
VH:VL
IGHV3
IGKV2
h
l
QVQLVESGGGVVQPGRSLRLSCAASGFNFNKFGMHWVRQVPGKGLEWLTYIWYDGSNADYVDSVKGRFTISRDNSINTLYLQMNSLRADDTAVYFCARGFYDSSSLESWGQGALVIVSSAS
DIVMTQSPLSLAVTPGEPASISCRSSQTLLHNNGYNYFSWYLQKPGQAPQLLIYLGSNRAPGVSDRFSGSGSGTSFTLEISRVEAEDVGVYYCMQGRHTPWTFGQGTKVEIKRT
QVQLVESGGGVVQPGRSLRLSCAASGFNFNKFGMHWVRQVPGKGLEWLTYIWYDGSNADYVDSVKGRFTISRDNSINTLYLQMNSLRADDTAVYFCARGFYDSSSLESWGQGALVIVSSAS
DIVMTQSPLSLAVTPGEPASISCRSSQTLLHNNGYNYFSWYLQKPGQAPQLLIYLGSNRAPGVSDRFSGSGSGTSFTLEISRVEAEDVGVYYCMQGRHTPWTFGQGTKVEIKRT
14.471831
14.499328
121
114
121
114
121
114
40
heavy chains of d4 fab
light chains of d4 fab
homo sapiens
homo sapiens
A;B
protein;protein
capsid protein;capsid protein
hepatitis b virus genotype c;hepatitis b virus genotype c
19;16
11;10
1.0;1.0
HL
train
8zrh_H_L
8zrh
hbcag-d4 fab complex
no
viral protein/immune system
2024-06-04
2024-11-13
electron microscopy
3.6
N.A.
N.A.
39601613
10.1128/jvi.01694-24
0
auth_asym_id
VH:VL
IGHV3
IGKV2
H
L
QVQLVESGGGVVQPGRSLRLSCAASGFNFNKFGMHWVRQVPGKGLEWLTYIWYDGSNADYVDSVKGRFTISRDNSINTLYLQMNSLRADDTAVYFCARGFYDSSSLESWGQGALVIVSSAS
DIVMTQSPLSLAVTPGEPASISCRSSQTLLHNNGYNYFSWYLQKPGQAPQLLIYLGSNRAPGVSDRFSGSGSGTSFTLEISRVEAEDVGVYYCMQGRHTPWTFGQGTKVEIKRT
QVQLVESGGGVVQPGRSLRLSCAASGFNFNKFGMHWVRQVPGKGLEWLTYIWYDGSNADYVDSVKGRFTISRDNSINTLYLQMNSLRADDTAVYFCARGFYDSSSLESWGQGALVIVSSAS
DIVMTQSPLSLAVTPGEPASISCRSSQTLLHNNGYNYFSWYLQKPGQAPQLLIYLGSNRAPGVSDRFSGSGSGTSFTLEISRVEAEDVGVYYCMQGRHTPWTFGQGTKVEIKRT
14.47186
14.499173
121
114
121
114
121
114
40
heavy chains of d4 fab
light chains of d4 fab
homo sapiens
homo sapiens
C;D
protein;protein
capsid protein;capsid protein
hepatitis b virus genotype c;hepatitis b virus genotype c
16;18
9;9
1.0;0.9
HL
train
8zsp_N
8zsp
cryo-em structure of the lsd-bound htaar1-gs complex
no
membrane protein/immune system
2024-06-05
2024-07-24
electron microscopy
3.14
N.A.
N.A.
39002128
10.1016/j.celrep.2024.114505
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
MQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVS
N.A.
13.594482
0
139
0
127
0
127
0
0
nb35
N.A.
lama glama
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
51;33
14;12
0.54;0.71
H_only
train
8zss_N
8zss
cryo-em structure of the ro5263397-bound htaar1-gs complex
no
membrane protein/immune system
2024-06-05
2024-07-24
electron microscopy
3.07
N.A.
N.A.
39002128
10.1016/j.celrep.2024.114505
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
MQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVS
N.A.
13.608288
0
139
0
127
0
127
0
0
nb35
N.A.
lama glama
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
48;29
13;11
0.57;0.73
H_only
train
9fm0_A_C
9fm0
human antibody (fab) and p. aeruginosa (t3ss) protein pcrv-fragment complex
no
immune system
2024-06-05
2025-06-18
x-ray diffraction
2.56
0.237
0.21
N.A.
10.7554/elife.105195.2
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
A
C
QVQLLGSGGGLVQPGGSLRLSCAASGFTFRNYAMIWVRQAPGKGLDWVSTISGTGDSSDYADSVRGRFTVSRDNSKNTLYLEMNSLRAEDTAVFYCAKDSRGAAAEFFDYWGQGIFVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD
AIRMTQSPSSFSASIGDRVTITCRASQGISSYLAWYQQKPGKAPNLLIYATSSLQSGVPSRFSGSGSGTDFTLTITSLQSEDFATYYCQQYYSHPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLLGSGGGLVQPGGSLRLSCAASGFTFRNYAMIWVRQAPGKGLDWVSTISGTGDSSDYADSVRGRFTVSRDNSKNTLYLEMNSLRAEDTAVFYCAKDSRGAAAEFFDYWGQGIFVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD
AIRMTQSPSSFSASIGDRVTITCRASQGISSYLAWYQQKPGKAPNLLIYATSSLQSGVPSRFSGSGSGTDFTLTITSLQSEDFATYYCQQYYSHPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
20.905052
23.425102
225
214
225
214
225
214
107
human fab heavy chain (fabhc) v-region
human fab light chain (fablc) v-region
homo sapiens
homo sapiens
E
protein
type iii secretion protein pcrv
pseudomonas aeruginosa
50
23
0.88
HL
train
9fm0_B_D
9fm0
human antibody (fab) and p. aeruginosa (t3ss) protein pcrv-fragment complex
no
immune system
2024-06-05
2025-06-18
x-ray diffraction
2.56
0.237
0.21
N.A.
10.7554/elife.105195.2
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
B
D
QVQLLGSGGGLVQPGGSLRLSCAASGFTFRNYAMIWVRQAPGKGLDWVSTISGTGDSSDYADSVRGRFTVSRDNSKNTLYLEMNSLRAEDTAVFYCAKDSRGAAAEFFDYWGQGIFVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD
AIRMTQSPSSFSASIGDRVTITCRASQGISSYLAWYQQKPGKAPNLLIYATSSLQSGVPSRFSGSGSGTDFTLTITSLQSEDFATYYCQQYYSHPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLLGSGGGLVQPGGSLRLSCAASGFTFRNYAMIWVRQAPGKGLDWVSTISGTGDSSDYADSVRGRFTVSRDNSKNTLYLEMNSLRAEDTAVFYCAKDSRGAAAEFFDYWGQGIFVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD
AIRMTQSPSSFSASIGDRVTITCRASQGISSYLAWYQQKPGKAPNLLIYATSSLQSGVPSRFSGSGSGTDFTLTITSLQSEDFATYYCQQYYSHPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
21.028261
23.480202
225
214
225
214
225
214
109
human fab heavy chain (fabhc) v-region
human fab light chain (fablc) v-region
homo sapiens
homo sapiens
F
protein
type iii secretion protein pcrv
pseudomonas aeruginosa
50
23
0.88
HL
train
9fm1_F
9fm1
cryo-em structure of influenza b/washington/02/2019 virus hemagglutinin in complex with single-domain antibody hvhh-69.
no
antiviral protein
2024-06-05
2025-07-09
electron microscopy
2.93
N.A.
N.A.
40593518
10.1038/s41467-025-60232-3
0
auth_asym_id
VHH
IGHV3
N.A.
F
N.A.
DVQLVESGGGLVQPGGSLRLSCAASGLVDSANVAWFRQAPGKEREFVAAVKWRSGSTIYADSVEGRFTISRDNAKSTVYLQMNSLRPEDTAVYYCAANQWYSGGYYGEKNYDYWGQGTLVTVSS
N.A.
DVQLVESGGGLVQPGGSLRLSCAASGLVDSANVAWFRQAPGKEREFVAAVKWRSGSTIYADSVEGRFTISRDNAKSTVYLQMNSLRPEDTAVYYCAANQWYSGGYYGEKNYDYWGQGTLVTVSS
N.A.
13.876714
0
124
0
124
0
124
0
0
single-domain antibody hvhh-69
N.A.
lama glama
N.A.
A;B
protein;protein
hemagglutinin;hemagglutinin
influenza b virus;influenza b virus
29;34
9;16
0.64;1.0
H_only
train
9fm1_D
9fm1
cryo-em structure of influenza b/washington/02/2019 virus hemagglutinin in complex with single-domain antibody hvhh-69.
no
antiviral protein
2024-06-05
2025-07-09
electron microscopy
2.93
N.A.
N.A.
40593518
10.1038/s41467-025-60232-3
0
auth_asym_id
VHH
IGHV3
N.A.
D
N.A.
DVQLVESGGGLVQPGGSLRLSCAASGLVDSANVAWFRQAPGKEREFVAAVKWRSGSTIYADSVEGRFTISRDNAKSTVYLQMNSLRPEDTAVYYCAANQWYSGGYYGEKNYDYWGQGTLVTVSS
N.A.
DVQLVESGGGLVQPGGSLRLSCAASGLVDSANVAWFRQAPGKEREFVAAVKWRSGSTIYADSVEGRFTISRDNAKSTVYLQMNSLRPEDTAVYYCAANQWYSGGYYGEKNYDYWGQGTLVTVSS
N.A.
13.879188
0
124
0
124
0
124
0
0
single-domain antibody hvhh-69
N.A.
lama glama
N.A.
A;C
protein;protein
hemagglutinin;hemagglutinin
influenza b virus;influenza b virus
33;29
15;9
1.0;0.64
H_only
train
9fm1_E
9fm1
cryo-em structure of influenza b/washington/02/2019 virus hemagglutinin in complex with single-domain antibody hvhh-69.
no
antiviral protein
2024-06-05
2025-07-09
electron microscopy
2.93
N.A.
N.A.
40593518
10.1038/s41467-025-60232-3
0
auth_asym_id
VHH
IGHV3
N.A.
E
N.A.
DVQLVESGGGLVQPGGSLRLSCAASGLVDSANVAWFRQAPGKEREFVAAVKWRSGSTIYADSVEGRFTISRDNAKSTVYLQMNSLRPEDTAVYYCAANQWYSGGYYGEKNYDYWGQGTLVTVSS
N.A.
DVQLVESGGGLVQPGGSLRLSCAASGLVDSANVAWFRQAPGKEREFVAAVKWRSGSTIYADSVEGRFTISRDNAKSTVYLQMNSLRPEDTAVYYCAANQWYSGGYYGEKNYDYWGQGTLVTVSS
N.A.
13.897513
0
124
0
124
0
124
0
0
single-domain antibody hvhh-69
N.A.
lama glama
N.A.
B;C
protein;protein
hemagglutinin;hemagglutinin
influenza b virus;influenza b virus
27;32
8;14
0.62;1.0
H_only
train
9fm2_A
9fm2
cryo-em structure of influenza b/washington/02/2019 virus neuraminidase in complex with single-domain antibody hvhh-525.
no
antiviral protein
2024-06-05
2025-07-09
electron microscopy
3.6
N.A.
N.A.
40593518
10.1038/s41467-025-60232-3
0
auth_asym_id
VHH
IGHV3
N.A.
A
N.A.
DVQLVESGGGLVQPGGSLRLSCAASGDIFSTHIMGWYRQAPGKQRELVATIDTDGSTNYADSVKGRFTISRDNAKNTVYLQMNSLRPEDTAVYYCNAESAYSDYRLPDYWGQGTLVTVSS
N.A.
DVQLVESGGGLVQPGGSLRLSCAASGDIFSTHIMGWYRQAPGKQRELVATIDTDGSTNYADSVKGRFTISRDNAKNTVYLQMNSLRPEDTAVYYCNAESAYSDYRLPDYWGQGT
N.A.
13.400607
0
120
0
101
0
114
0
0
single-domain antibody hvhh-525
N.A.
lama glama
N.A.
B
protein
neuraminidase
influenza b virus
35
10
0.71
H_only
train
8zua_B_D
8zua
the complex structure of mpxv m1r and neutralizing antibody a138
no
antiviral protein/immune system
2024-06-08
2025-04-02
x-ray diffraction
3.49
0.286
0.237
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
B
D
QVQLLESGGGLVKPGGSLRLSCAASGFTFRDYYMSWIREAPGKGLEWVASISRSGTTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDEASSNYAFDYWGQGTPVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV
IQLTQSPSSVSASVGDGVTITCRASQPIGTWVAWYQQKPGKAPKLLISGASSLQSGLPSRFSGRKSGTDFTLTISSLQPDDSATYFCQQTNTFPLTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLLESGGGLVKPGGSLRLSCAASGFTFRDYYMSWIREAPGKGLEWVASISRSGTTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDEASSNYAFDYWGQGTPVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV
IQLTQSPSSVSASVGDGVTITCRASQPIGTWVAWYQQKPGKAPKLLISGASSLQSGLPSRFSGRKSGTDFTLTISSLQPDDSATYFCQQTNTFPLTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
20.863104
22.98274
218
213
218
199
218
212
101
a138 heavy chain
a138 light chain
homo sapiens
homo sapiens
C
protein
entry-fusion complex associated protein opg095
monkeypox virus
40
20
0.87
HL
train
8zua_A_G
8zua
the complex structure of mpxv m1r and neutralizing antibody a138
no
antiviral protein/immune system
2024-06-08
2025-04-02
x-ray diffraction
3.49
0.286
0.237
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
A
G
QVQLLESGGGLVKPGGSLRLSCAASGFTFRDYYMSWIREAPGKGLEWVASISRSGTTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDEASSNYAFDYWGQGTPVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV
IQLTQSPSSVSASVGDGVTITCRASQPIGTWVAWYQQKPGKAPKLLISGASSLQSGLPSRFSGRKSGTDFTLTISSLQPDDSATYFCQQTNTFPLTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLLESGGGLVKPGGSLRLSCAASGFTFRDYYMSWIREAPGKGLEWVASISRSGTTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDEASSNYAFDYWGQGTPVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV
IQLTQSPSSVSASVGDGVTITCRASQPIGTWVAWYQQKPGKAPKLLISGASSLQSGLPSRFSGRKSGTDFTLTISSLQPDDSATYFCQQTNTFPLTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
20.831984
22.922749
218
213
218
198
218
212
98
a138 heavy chain
a138 light chain
homo sapiens
homo sapiens
F
protein
entry-fusion complex associated protein opg095
monkeypox virus
40
21
0.91
HL
train
8zua_E_I
8zua
the complex structure of mpxv m1r and neutralizing antibody a138
no
antiviral protein/immune system
2024-06-08
2025-04-02
x-ray diffraction
3.49
0.286
0.237
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
E
I
QVQLLESGGGLVKPGGSLRLSCAASGFTFRDYYMSWIREAPGKGLEWVASISRSGTTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDEASSNYAFDYWGQGTPVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV
IQLTQSPSSVSASVGDGVTITCRASQPIGTWVAWYQQKPGKAPKLLISGASSLQSGLPSRFSGRKSGTDFTLTISSLQPDDSATYFCQQTNTFPLTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLLESGGGLVKPGGSLRLSCAASGFTFRDYYMSWIREAPGKGLEWVASISRSGTTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDEASSNYAFDYWGQGTPVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV
IQLTQSPSSVSASVGDGVTITCRASQPIGTWVAWYQQKPGKAPKLLISGASSLQSGLPSRFSGRKSGTDFTLTISSLQPDDSATYFCQQTNTFPLTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
20.884075
22.9979
218
213
218
199
218
212
104
a138 heavy chain
a138 light chain
homo sapiens
homo sapiens
H
protein
entry-fusion complex associated protein opg095
monkeypox virus
37
19
0.86
HL
train
8zua_J_L
8zua
the complex structure of mpxv m1r and neutralizing antibody a138
no
antiviral protein/immune system
2024-06-08
2025-04-02
x-ray diffraction
3.49
0.286
0.237
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
J
L
QVQLLESGGGLVKPGGSLRLSCAASGFTFRDYYMSWIREAPGKGLEWVASISRSGTTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDEASSNYAFDYWGQGTPVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV
IQLTQSPSSVSASVGDGVTITCRASQPIGTWVAWYQQKPGKAPKLLISGASSLQSGLPSRFSGRKSGTDFTLTISSLQPDDSATYFCQQTNTFPLTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLLESGGGLVKPGGSLRLSCAASGFTFRDYYMSWIREAPGKGLEWVASISRSGTTIYYADSVKGRFTISRDNAKNSLYLQMNSLRAEDTAVYYCARDEASSNYAFDYWGQGTPVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK
IQLTQSPSSVSASVGDGVTITCRASQPIGTWVAWYQQKPGKAPKLLISGASSLQSGLPSRFSGRKSGTDFTLTISSLQPDDSATYFCQQTNTFPLTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
20.954393
22.988194
218
213
217
199
217
212
97
a138 heavy chain
a138 light chain
homo sapiens
homo sapiens
K
protein
entry-fusion complex associated protein opg095
monkeypox virus
35
17
0.89
HL
train
9c79_H_L
9c79
human monoclonal antibody mad21-101 bound to the n-terminus of cleaved circumsporozoite protein
no
immune system
2024-06-10
2024-12-25
x-ray diffraction
1.46
0.2
0.173
39745947
10.1126/science.adr0510
0
auth_asym_id
FabH:FabL
IGHV4
IGKV4
H
L
KVQLQESGPGQVKPSETLSLTCSVSGASVTVDYWSWIRQTPERGLEWIGYISYTGRTNYNPSLKSRVTISTDTAKNQVSLKLSSVTAADTAVYYCTRDRSECPDGSCFAYVMAVWGHGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
DIVMTQSPESLAVSLGERATINCKSNQSLLYSSTNKNYLVWYLQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYLSPLTFGGGTTVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGEC
VQLQESGPGQVKPSETLSLTCSVSGASVTVDYWSWIRQTPERGLEWIGYISYTGRTNYNPSLKSRVTISTDTAKNQVSLKLSSVTAADTAVYYCTRDRSECPDGSCFAYVMAVWGHGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
DIVMTQSPESLAVSLGERATINCKSNQSLLYSSTNKNYLVWYLQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYLSPLTFGGGTTVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGE
21.540695
23.726505
228
218
226
217
226
217
96
monoclonal antibody mad21-101 fab heavy chain
monoclonal antibody mad21-101 fab light chain
homo sapiens
homo sapiens
D
peptide
circumsporozoite protein
plasmodium falciparum 3d7
34
20
0.91
HL
train
9c75_H_L
9c75
the crystal structure of hiv-1 rev response element stem-loop ii g34u mutant in complex with a fab
yes
rna/immune system
2024-06-10
2025-05-28
x-ray diffraction
3.04
0.252
0.205
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
EISEVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPSTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
SEVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPSTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
22.723469
23.242718
233
215
226
215
226
215
103
bl3-6 fab heavy chain
bl3-6 fab light chain
homo sapiens
homo sapiens
R
RNA
rev response element
human immunodeficiency virus 1
28
18
0.9
HL
train
9c6y_A_B
9c6y
crystal structure of sars-cov-2 xbb.1.5 rbd bound to cov2-3906 fab
no
viral protein/immune system
2024-06-10
2025-10-08
x-ray diffraction
2.68
0.242
0.207
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV4
IGLV6
A
B
QVQLQESGPGLVKPSQTLSLTCTVSGDSISSDGYYWSWLRQRPGKGLEWIGYIYNSGSTHYNPSLNSRVSISIDTSKTQFSLKLSSVTAADTAVYYCARALVLITYVWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
NFMLTQPHSVSESPGKTVTISCTGSSGSVASNYVQWYQHRPGSAPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISELKPEDEADYYCQSYGDRNVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
QVQLQESGPGLVKPSQTLSLTCTVSGDSISSDGYYWSWLRQRPGKGLEWIGYIYNSGSTHYNPSLNSRVSISIDTSKTQFSLKLSSVTAADTAVYYCARALVLITYVWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
NFMLTQPHSVSESPGKTVTISCTGSSGSVASNYVQWYQHRPGSAPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISELKPEDEADYYCQSYGDRNVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
20.95755
24.333527
225
216
223
213
223
213
100
heavy chain of cov2-3906 fab
light chain of cov2-3906 fab
homo sapiens
homo sapiens
E
protein
spike protein s2'
severe acute respiratory syndrome coronavirus
55
20
0.74
HL
train
9c6y_C_D
9c6y
crystal structure of sars-cov-2 xbb.1.5 rbd bound to cov2-3906 fab
no
viral protein/immune system
2024-06-10
2025-10-08
x-ray diffraction
2.68
0.242
0.207
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV4
IGLV6
C
D
QVQLQESGPGLVKPSQTLSLTCTVSGDSISSDGYYWSWLRQRPGKGLEWIGYIYNSGSTHYNPSLNSRVSISIDTSKTQFSLKLSSVTAADTAVYYCARALVLITYVWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
NFMLTQPHSVSESPGKTVTISCTGSSGSVASNYVQWYQHRPGSAPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISELKPEDEADYYCQSYGDRNVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
QVQLQESGPGLVKPSQTLSLTCTVSGDSISSDGYYWSWLRQRPGKGLEWIGYIYNSGSTHYNPSLNSRVSISIDTSKTQFSLKLSSVTAADTAVYYCARALVLITYVWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
NFMLTQPHSVSESPGKTVTISCTGSSGSVASNYVQWYQHRPGSAPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISELKPEDEADYYCQSYGDRNVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
21.221561
24.326862
225
216
219
213
224
213
99
heavy chain of cov2-3906 fab
light chain of cov2-3906 fab
homo sapiens
homo sapiens
F
protein
spike protein s2'
severe acute respiratory syndrome coronavirus
57
20
0.67
HL
train
9fns_C_D
9fns
cryo-em structure of the p domain of the hepatitis e virus orf2 protein in complex with fab es1.327
no
viral protein
2024-06-11
2025-05-14
electron microscopy
3.5
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV1
IGKV1
C
D
QVQLVQSGGEVKKPGASVRVSCQTSGYSFTHYSITWVRQAPGQGLEWMGWITTYNGKTSYAQKFQDRVTMTADTSSRTAYVELRSLRSDDTAVYYCVRVWTGYGTNRGDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
PSSLYASVGDRVTITCRASQSINTFLNWYQQKPGNAPKLLIHAASTLESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSDNNFALTFGGGTKVEIRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVQSGGEVKKPGASVRVSCQTSGYSFTHYSITWVRQAPGQGLEWMGWITTYNGKTSYAQKFQDRVTMTADTSSRTAYVELRSLRSDDTAVYYCVRVWTGYGTNRGDYWGQGTLVTVSS
PSSLYASVGDRVTITCRASQSINTFLNWYQQKPGNAPKLLIHAASTLESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSDNNFALTFGGGTKVEI
14.272057
13.313667
233
207
121
100
121
100
38
human igg antibody es1.327 - fab heavy chain
human igg antibody es1.327 - fab light chain
homo sapiens
homo sapiens
A
protein
secreted protein orf2
hepatitis e virus
34
15
0.94
HL
train
9fns_E_F
9fns
cryo-em structure of the p domain of the hepatitis e virus orf2 protein in complex with fab es1.327
no
viral protein
2024-06-11
2025-05-14
electron microscopy
3.5
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV1
IGKV1
E
F
QVQLVQSGGEVKKPGASVRVSCQTSGYSFTHYSITWVRQAPGQGLEWMGWITTYNGKTSYAQKFQDRVTMTADTSSRTAYVELRSLRSDDTAVYYCVRVWTGYGTNRGDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
PSSLYASVGDRVTITCRASQSINTFLNWYQQKPGNAPKLLIHAASTLESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSDNNFALTFGGGTKVEIRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVQSGGEVKKPGASVRVSCQTSGYSFTHYSITWVRQAPGQGLEWMGWITTYNGKTSYAQKFQDRVTMTADTSSRTAYVELRSLRSDDTAVYYCVRVWTGYGTNRGDYWGQGTLVTVS
PSSLYASVGDRVTITCRASQSINTFLNWYQQKPGNAPKLLIHAASTLESGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSDNNFALTFGGGTKVEI
14.181027
13.279963
233
207
120
100
120
100
38
human igg antibody es1.327 - fab heavy chain
human igg antibody es1.327 - fab light chain
homo sapiens
homo sapiens
B
protein
secreted protein orf2
hepatitis e virus
39
18
0.95
HL
train
9c7s_H_L
9c7s
cryo em structure of sars-cov-2 (bq 1.1) rbd in complex with fab cov2-3891 (local refine)
no
viral protein/immune system
2024-06-11
2025-10-08
electron microscopy
4
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV1
IGLV1
H
L
QVLLVQSGAEVKKPGASVKVSCKASGYTFTNNHLNWLRQAPGQGREWMGIIDPRSGGSSLAQKFQGRVTMTSVTSTNTVYMEMVSLKSEDTAVYYCARGGSKWYEGFDNWGQGTLV
VLTQAPSASGTPGQRATISCSGSYSNIGNNNVYWYQQLPETAPKLLIYNNDQRPSGVPDRFSASKSGTSASLAISGLRSEDEAEYFCAAWNNGLSGSNWVFGGGTQL
QVLLVQSGAEVKKPGASVKVSCKASGYTFTNNHLNWLRQAPGQGREWMGIIDPRSGGSSLAQKFQGRVTMTSVTSTNTVYMEMVSLKSEDTAVYYCARGGSKWYEGFDNWGQGTLV
VLTQAPSASGTPGQRATISCSGSYSNIGNNNVYWYQQLPETAPKLLIYNNDQRPSGVPDRFSASKSGTSASLAISGLRSEDEAEYFCAAWNNGLSGSNWVFGGGTQL
13.761438
13.614417
116
107
116
107
116
107
42
fab cov-3891 heavy chain
fab cov-3891 light chain
homo sapiens
homo sapiens
C
protein
spike protein s2'
severe acute respiratory syndrome coronavirus 2
36
15
0.71
HL
train
9fot_B
9fot
human monocarboxylate transporter 8 bound to silychristin
no
transport protein
2024-06-12
2025-05-21
electron microscopy
3
N.A.
N.A.
40368961
10.1038/s41467-025-59751-w
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
GSEVQLQESGGGLVQPGGSLRLSCTASGVTISALNAMAMGWYRQAPGERRVMVAAVSERGNAMYRESVQGRFTVTRDFTNKMVSLQMDNLKPEDTAVYYCHVLEDRVDSFHDYWGQGTQVTVSS
N.A.
VQLQESGGGLVQPGGSLRLSCTASGVTISALNAMAMGWYRQAPGERRVMVAAVSERGNAMYRESVQGRFTVTRDFTNKMVSLQMDNLKPEDTAVYYCHVLEDRVDSFHDYWGQGTQVTVSS
N.A.
14.376331
0
124
0
121
0
121
0
0
alfa-tag binding nanobody
N.A.
vicugna pacos
N.A.
A
protein
monocarboxylate transporter 8
homo sapiens
39
11
0.48
H_only
train
8zvz_N
8zvz
cryo-em strcuture of prostaglandin d2 receptor dp1 activated by bw245c
yes
membrane protein
2024-06-12
2025-05-28
electron microscopy
2.35
N.A.
N.A.
40440061
10.1073/pnas.2501902122
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
MKYLLPTAAAGLLLLAAQPAMAQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHH
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS
N.A.
13.840313
0
156
0
128
0
128
0
0
nanobody nb35
N.A.
lama glama
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
45;29
13;11
0.54;0.73
H_only
train
8zw0_N
8zw0
cryo-em strcuture of prostaglandin d2 receptor dp1 activated by pgd2
yes
membrane protein
2024-06-12
2025-05-28
electron microscopy
2.72
N.A.
N.A.
40440061
10.1073/pnas.2501902122
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
MKYLLPTAAAGLLLLAAQPAMAQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHH
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS
N.A.
13.81458
0
156
0
128
0
128
0
0
nanobody nb35
N.A.
lama glama
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
47;29
12;12
0.52;0.75
H_only
train
8zwf_D_C
8zwf
cryoem structure of jr14a bound c3ar-bril-bag2 complex
yes
immune system
2024-06-13
2025-05-14
electron microscopy
3
N.A.
N.A.
39788969
10.1038/s41421-024-00765-x
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
D
C
EISEVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECVDENLYFQGASHHHHHHHH
SEVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
23.817825
23.120045
229
235
225
214
225
214
108
anti-bril fab hc
anti-bril fab lc
homo sapiens
homo sapiens
A
protein
beta-2 adrenergic receptor,c3a anaphylatoxin chemotactic receptor,soluble cytochrome b562
homo sapiens
44
17
0.77
HL
train
8zwg_E
8zwg
cryoem structure of jr14a bound c3ar-gi complex
yes
immune system
2024-06-13
2025-05-14
electron microscopy
2.87
N.A.
N.A.
39788969
10.1038/s41421-024-00765-x
0
auth_asym_id
scFv
N.A.
N.A.
E
N.A.
MVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELVDENLYFQGASHHHHHHHH
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.58088
0
267
0
230
0
247
0
0
scfv16
N.A.
synthetic construct
N.A.
B;C
protein;protein
guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;rattus norvegicus
29;24
18;9
1.0;0.82
H_only
train
9fq3_E_F
9fq3
hev orf2 protein in complex with fabs es1.114 and es5.127
no
viral protein
2024-06-14
2025-05-14
electron microscopy
3.8
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV5
IGLV1
E
F
EVQLVQSGAEVKKPGESLKISCKGSGYRSGYSFSSYWIGWVRQRPGKGLEWMGIIQPGDSDTTYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCARVRGSLKVPAAVPFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQFPGIAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSDVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
EVQLVQSGAEVKKPGESLKISCKGSGYRSGYSFSSYWIGWVRQRPGKGLEWMGIIQPGDSDTTYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCARVRGSLKVPAAVPFDPWGQGTLVT
VLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQFPGIAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSDVVFGGGTKLT
14.328797
12.940357
240
216
125
95
125
106
43
human igg antibody es5.127 - fab heavy chain
human igg antibody es5.127 - fab light chain
homo sapiens
homo sapiens
A
protein
secreted protein orf2
hepatitis e virus
45
19
0.86
HL
train
9fq3_I_J
9fq3
hev orf2 protein in complex with fabs es1.114 and es5.127
no
viral protein
2024-06-14
2025-05-14
electron microscopy
3.8
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV3
IGKV1
I
J
VQLVESGGGLVKPGGSLRLSCAASGFIFSDYYLSWIRQAPGKGLEWIAYISSGGSTIYYAGSVKGRFTISRDDARNSLYLQMNSLRVEDTAVYYCAREPTYHDFGSGYYTGFDYWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
PSSLSASIGDRVTITCRASQSVSVYLNWYQQKPGKVPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYNLFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQLVESGGGLVKPGGSLRLSCAASGFIFSDYYLSWIRQAPGKGLEWIAYISSGGSTIYYAGSVKGRFTISRDDARNSLYLQMNSLRVEDTAVYYCAREPTYHDFGSGYYTGFDYWGQGALVTVS
PSSLSASIGDRVTITCRASQSVSVYLNWYQQKPGKVPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYNLFTFGPGTKVDIK
14.785876
13.129114
237
206
124
99
124
99
46
human igg antibody es1.114 - fab heavy chain
himan igg antibody es1.114 - fab light chain
homo sapiens
homo sapiens
A
protein
secreted protein orf2
hepatitis e virus
40
18
0.9
HL
train
9fq3_C_D
9fq3
hev orf2 protein in complex with fabs es1.114 and es5.127
no
viral protein
2024-06-14
2025-05-14
electron microscopy
3.8
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV5
IGLV1
C
D
EVQLVQSGAEVKKPGESLKISCKGSGYRSGYSFSSYWIGWVRQRPGKGLEWMGIIQPGDSDTTYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCARVRGSLKVPAAVPFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
QSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQFPGIAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSDVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
EVQLVQSGAEVKKPGESLKISCKGSGYRSGYSFSSYWIGWVRQRPGKGLEWMGIIQPGDSDTTYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCARVRGSLKVPAAVPFDPWGQGTLVT
VLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQFPGIAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSDVVFGGGTKLT
15.48532
13.647841
240
216
125
95
125
106
41
human igg antibody es5.127 - fab heavy chain
human igg antibody es5.127 - fab light chain
homo sapiens
homo sapiens
B
protein
secreted protein orf2
hepatitis e virus
42
17
0.85
HL
train
9fq3_G_H
9fq3
hev orf2 protein in complex with fabs es1.114 and es5.127
no
viral protein
2024-06-14
2025-05-14
electron microscopy
3.8
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV3
IGKV1
G
H
VQLVESGGGLVKPGGSLRLSCAASGFIFSDYYLSWIRQAPGKGLEWIAYISSGGSTIYYAGSVKGRFTISRDDARNSLYLQMNSLRVEDTAVYYCAREPTYHDFGSGYYTGFDYWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
PSSLSASIGDRVTITCRASQSVSVYLNWYQQKPGKVPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYNLFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQLVESGGGLVKPGGSLRLSCAASGFIFSDYYLSWIRQAPGKGLEWIAYISSGGSTIYYAGSVKGRFTISRDDARNSLYLQMNSLRVEDTAVYYCAREPTYHDFGSGYYTGFDYWGQGALVTVS
PSSLSASIGDRVTITCRASQSVSVYLNWYQQKPGKVPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYNLFTFGPGTKVDIK
14.780803
13.09256
237
206
124
99
124
99
44
human igg antibody es1.114 - fab heavy chain
himan igg antibody es1.114 - fab light chain
homo sapiens
homo sapiens
B
protein
secreted protein orf2
hepatitis e virus
39
21
0.91
HL
train
9c9k_H_L
9c9k
anti-ospa fab 319-33
no
immune system
2024-06-14
2025-08-27
x-ray diffraction
1.6
0.2
0.172
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV5
IGKV3
H
L
EVQLVQSGAEVKKPGESLKISCKVSGYSFSTYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLQWSSLKASDTAMYYCARSRWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTH
EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYDSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQLVQSGAEVKKPGESLKISCKVSGYSFSTYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLQWSSLKASDTAMYYCARSRWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYDSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
21.731232
22.757761
223
215
209
214
215
214
90
319-33 monoclonal fab heavy chain
319-33 monoclonal fab light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
9fqo_A_B
9fqo
crystal structure of c0083 fab targeting the oxidized macrophage migration inhibitory factor (oxmif)
no
immune system
2024-06-17
2025-01-01
x-ray diffraction
1.7
0.237
0.215
39727487
10.3390/antib13040104
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
A
B
EVQLQESGGGLVQPGGSLRLSCAASGFTFSIYSMNWVRQAPGKGLEWVSSIGSSGGTTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAGSQYLYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHT
DIQMTQSPSSLSASVGDRVTITCRSSQRIMTYLNWYQQKPGKAPKLLIYVGSHSQSGVPSRFRGSGSETDFTLTISGLQPEDSATYYCQQSFFTPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLQESGGGLVQPGGSLRLSCAASGFTFSIYSMNWVRQAPGKGLEWVSSIGSSGGTTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAGSQYLYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD
DIQMTQSPSSLSASVGDRVTITCRSSQRIMTYLNWYQQKPGKAPKLLIYVGSHSQSGVPSRFRGSGSETDFTLTISGLQPEDSATYYCQQSFFTPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
21.563921
23.558659
226
214
222
214
222
214
102
c0083 fab heavy chain
c0083 fab light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
8zye_B
8zye
crystal structure of cd38 in complex with rp02 antibody
no
membrane protein
2024-06-17
2025-09-17
x-ray diffraction
2.72
0.271
0.214
N.A.
N.A.
0
auth_asym_id
scFv
N.A.
N.A.
B
N.A.
PAQLVESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCAREDYYYYMDVWGKGTTVTVQSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSAGVFGGGTKLTVL
N.A.
PAQLVESGPGLVKPSGTLSLTCAVSGGSISSSNWWSWVRQPPGKGLEWIGEIYHSGSTNYNPSLKSRVTISVDKSKNQFSLKLSSVTAADTAVYYCAREDYYYYMDVWGKGTTVTVQSVLTQPPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSSLSAGVFGGGTKLTVL
N.A.
17.040806
0
226
0
225
0
226
0
0
rp02 scfv
N.A.
homo sapiens
N.A.
A
protein
adp-ribosyl cyclase/cyclic adp-ribose hydrolase 1
homo sapiens
32
14
0.78
H_only
train
9ii2_S
9ii2
cryo-em structure of the 2:2 complex of mglu3 and beta-arrestin1
no
membrane protein
2024-06-18
2025-03-05
electron microscopy
3.7
N.A.
N.A.
40050438
10.1038/s41589-025-01858-8
0
auth_asym_id
scFv
N.A.
N.A.
S
N.A.
SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYKYVPVTFGQGTKVEIKGTTAASGSSGGSSSGAEVQLVESGGGLVQPGGSLRLSCAASGFNVYSSSIHWVRQAPGKGLEWVASISSYYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSRQFWYSGLDYWGQGTLVTVSSAHHHHHH
N.A.
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYKYVPVTFGQGTKVEIKGTTAASGSSGGSSSGAEVQLVESGGGLVQPGGSLRLSCAASGFNVYSSSIHWVRQAPGKGLEWVASISSYYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSRQFWYSGLDYWGQGTLVTV
N.A.
17.363455
0
251
0
222
0
241
0
0
scfv30
N.A.
mus musculus
N.A.
A
protein
beta-arrestin-1
homo sapiens
51
21
0.91
H_only
train
9ii2_D
9ii2
cryo-em structure of the 2:2 complex of mglu3 and beta-arrestin1
no
membrane protein
2024-06-18
2025-03-05
electron microscopy
3.7
N.A.
N.A.
40050438
10.1038/s41589-025-01858-8
0
auth_asym_id
scFv
N.A.
N.A.
D
N.A.
SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYKYVPVTFGQGTKVEIKGTTAASGSSGGSSSGAEVQLVESGGGLVQPGGSLRLSCAASGFNVYSSSIHWVRQAPGKGLEWVASISSYYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSRQFWYSGLDYWGQGTLVTVSSAHHHHHH
N.A.
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYKYVPVTFGQGTKVEIKGTTAASGSSGGSSSGAEVQLVESGGGLVQPGGSLRLSCAASGFNVYSSSIHWVRQAPGKGLEWVASISSYYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSRQFWYSGLDYWGQGTLVTV
N.A.
17.363459
0
251
0
222
0
241
0
0
scfv30
N.A.
mus musculus
N.A.
C
protein
beta-arrestin-1
homo sapiens
51
21
0.91
H_only
train
9fr3_C
9fr3
structure of the sars-cov-2 spike glycoprotein in complex with nanobody 7f
no
viral protein
2024-06-18
2025-03-19
electron microscopy
3.3
N.A.
N.A.
40059135
10.1186/s12951-025-03243-y
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
EVQLVESGGGLVEAGGSLRLSCVASGLTFSDYTMAWFRQVPGQEREFVSHIGWGGSETYYADSVKGRFTISRDNAKNAMYLQMNELKPDDTAVYYCAADRGSSFYYVRESEYTFWGQGTQVTVSSAAAEQKLISEEDLNGAAHHHHHH
N.A.
QLVESGGGLVEAGGSLRLSCVASGLTFSDYTMAWFRQVPGQEREFVSHIGWGGSETYYADSVKGRFTISRDNAKNAMYLQMNELKPDDTAVYYCAADRGSSFYYVRESEYTFWGQGTQVTV
N.A.
13.476413
0
148
0
119
0
121
0
0
nanobody 7f
N.A.
lama glama
N.A.
A;J
protein;protein
spike glycoprotein;spike glycoprotein
severe acute respiratory syndrome coronavirus;severe acute respiratory syndrome coronavirus
36;13
13;5
0.93;0.71
H_only
train
9fr3_L
9fr3
structure of the sars-cov-2 spike glycoprotein in complex with nanobody 7f
no
viral protein
2024-06-18
2025-03-19
electron microscopy
3.3
N.A.
N.A.
40059135
10.1186/s12951-025-03243-y
0
auth_asym_id
VHH
IGHV3
N.A.
L
N.A.
EVQLVESGGGLVEAGGSLRLSCVASGLTFSDYTMAWFRQVPGQEREFVSHIGWGGSETYYADSVKGRFTISRDNAKNAMYLQMNELKPDDTAVYYCAADRGSSFYYVRESEYTFWGQGTQVTVSSAAAEQKLISEEDLNGAAHHHHHH
N.A.
QLVESGGGLVEAGGSLRLSCVASGLTFSDYTMAWFRQVPGQEREFVSHIGWGGSETYYADSVKGRFTISRDNAKNAMYLQMNELKPDDTAVYYCAADRGSSFYYVRESEYTFWGQGTQVTV
N.A.
13.4764
0
148
0
119
0
121
0
0
nanobody 7f
N.A.
lama glama
N.A.
A;J
protein;protein
spike glycoprotein;spike glycoprotein
severe acute respiratory syndrome coronavirus;severe acute respiratory syndrome coronavirus
13;36
5;13
0.71;0.93
H_only
train
9fr3_E
9fr3
structure of the sars-cov-2 spike glycoprotein in complex with nanobody 7f
no
viral protein
2024-06-18
2025-03-19
electron microscopy
3.3
N.A.
N.A.
40059135
10.1186/s12951-025-03243-y
0
auth_asym_id
VHH
IGHV3
N.A.
E
N.A.
EVQLVESGGGLVEAGGSLRLSCVASGLTFSDYTMAWFRQVPGQEREFVSHIGWGGSETYYADSVKGRFTISRDNAKNAMYLQMNELKPDDTAVYYCAADRGSSFYYVRESEYTFWGQGTQVTVSSAAAEQKLISEEDLNGAAHHHHHH
N.A.
QLVESGGGLVEAGGSLRLSCVASGLTFSDYTMAWFRQVPGQEREFVSHIGWGGSETYYADSVKGRFTISRDNAKNAMYLQMNELKPDDTAVYYCAADRGSSFYYVRESEYTFWGQGTQVTV
N.A.
13.476381
0
148
0
119
0
121
0
0
nanobody 7f
N.A.
lama glama
N.A.
B;H
protein;protein
spike glycoprotein;spike glycoprotein
severe acute respiratory syndrome coronavirus;severe acute respiratory syndrome coronavirus
36;13
13;5
0.93;0.71
H_only
train
9fr3_K
9fr3
structure of the sars-cov-2 spike glycoprotein in complex with nanobody 7f
no
viral protein
2024-06-18
2025-03-19
electron microscopy
3.3
N.A.
N.A.
40059135
10.1186/s12951-025-03243-y
0
auth_asym_id
VHH
IGHV3
N.A.
K
N.A.
EVQLVESGGGLVEAGGSLRLSCVASGLTFSDYTMAWFRQVPGQEREFVSHIGWGGSETYYADSVKGRFTISRDNAKNAMYLQMNELKPDDTAVYYCAADRGSSFYYVRESEYTFWGQGTQVTVSSAAAEQKLISEEDLNGAAHHHHHH
N.A.
QLVESGGGLVEAGGSLRLSCVASGLTFSDYTMAWFRQVPGQEREFVSHIGWGGSETYYADSVKGRFTISRDNAKNAMYLQMNELKPDDTAVYYCAADRGSSFYYVRESEYTFWGQGTQVTV
N.A.
13.476377
0
148
0
119
0
121
0
0
nanobody 7f
N.A.
lama glama
N.A.
B;H
protein;protein
spike glycoprotein;spike glycoprotein
severe acute respiratory syndrome coronavirus;severe acute respiratory syndrome coronavirus
13;36
5;13
0.71;0.93
H_only
train
9fr3_F
9fr3
structure of the sars-cov-2 spike glycoprotein in complex with nanobody 7f
no
viral protein
2024-06-18
2025-03-19
electron microscopy
3.3
N.A.
N.A.
40059135
10.1186/s12951-025-03243-y
0
auth_asym_id
VHH
IGHV3
N.A.
F
N.A.
EVQLVESGGGLVEAGGSLRLSCVASGLTFSDYTMAWFRQVPGQEREFVSHIGWGGSETYYADSVKGRFTISRDNAKNAMYLQMNELKPDDTAVYYCAADRGSSFYYVRESEYTFWGQGTQVTVSSAAAEQKLISEEDLNGAAHHHHHH
N.A.
QLVESGGGLVEAGGSLRLSCVASGLTFSDYTMAWFRQVPGQEREFVSHIGWGGSETYYADSVKGRFTISRDNAKNAMYLQMNELKPDDTAVYYCAADRGSSFYYVRESEYTFWGQGTQVTV
N.A.
13.47638
0
148
0
119
0
121
0
0
nanobody 7f
N.A.
lama glama
N.A.
D;G
protein;protein
spike glycoprotein;spike glycoprotein
severe acute respiratory syndrome coronavirus;severe acute respiratory syndrome coronavirus
36;13
13;5
0.93;0.71
H_only
train
9fr3_I
9fr3
structure of the sars-cov-2 spike glycoprotein in complex with nanobody 7f
no
viral protein
2024-06-18
2025-03-19
electron microscopy
3.3
N.A.
N.A.
40059135
10.1186/s12951-025-03243-y
0
auth_asym_id
VHH
IGHV3
N.A.
I
N.A.
EVQLVESGGGLVEAGGSLRLSCVASGLTFSDYTMAWFRQVPGQEREFVSHIGWGGSETYYADSVKGRFTISRDNAKNAMYLQMNELKPDDTAVYYCAADRGSSFYYVRESEYTFWGQGTQVTVSSAAAEQKLISEEDLNGAAHHHHHH
N.A.
QLVESGGGLVEAGGSLRLSCVASGLTFSDYTMAWFRQVPGQEREFVSHIGWGGSETYYADSVKGRFTISRDNAKNAMYLQMNELKPDDTAVYYCAADRGSSFYYVRESEYTFWGQGTQVTV
N.A.
13.476391
0
148
0
119
0
121
0
0
nanobody 7f
N.A.
lama glama
N.A.
D;G
protein;protein
spike glycoprotein;spike glycoprotein
severe acute respiratory syndrome coronavirus;severe acute respiratory syndrome coronavirus
13;36
5;13
0.71;0.93
H_only
train
9fr4_A
9fr4
structure of the sars-cov-2 spike glycoprotein in complex with nanobody 7f (local refinement)
no
viral protein
2024-06-18
2025-03-19
electron microscopy
3.1
N.A.
N.A.
40059135
10.1186/s12951-025-03243-y
0
auth_asym_id
VHH
IGHV3
N.A.
A
N.A.
EVQLVESGGGLVEAGGSLRLSCVASGLTFSDYTMAWFRQVPGQEREFVSHIGWGGSETYYADSVKGRFTISRDNAKNAMYLQMNELKPDDTAVYYCAADRGSSFYYVRESEYTFWGQGTQVTVSSAAAEQKLISEEDLNGAAHHHHHH
N.A.
QLVESGGGLVEAGGSLRLSCVASGLTFSDYTMAWFRQVPGQEREFVSHIGWGGSETYYADSVKGRFTISRDNAKNAMYLQMNELKPDDTAVYYCAADRGSSFYYVRESEYTFWGQGTQVTV
N.A.
13.407938
0
148
0
119
0
121
0
0
nanobody 7f
N.A.
lama glama
N.A.
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus
35
13
0.93
H_only
train
9fr4_C
9fr4
structure of the sars-cov-2 spike glycoprotein in complex with nanobody 7f (local refinement)
no
viral protein
2024-06-18
2025-03-19
electron microscopy
3.1
N.A.
N.A.
40059135
10.1186/s12951-025-03243-y
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
EVQLVESGGGLVEAGGSLRLSCVASGLTFSDYTMAWFRQVPGQEREFVSHIGWGGSETYYADSVKGRFTISRDNAKNAMYLQMNELKPDDTAVYYCAADRGSSFYYVRESEYTFWGQGTQVTVSSAAAEQKLISEEDLNGAAHHHHHH
N.A.
QLVESGGGLVEAGGSLRLSCVASGLTFSDYTMAWFRQVPGQEREFVSHIGWGGSETYYADSVKGRFTISRDNAKNAMYLQMNELKPDDTAVYYCAADRGSSFYYVRESEYTFWGQGTQVTV
N.A.
13.407945
0
148
0
119
0
121
0
0
nanobody 7f
N.A.
lama glama
N.A.
D
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus
35
13
0.93
H_only
train
8zyy_D_Q
8zyy
cryo-em structure of neurotensin receptor 1 in complex with beta-arrestin1 and sbi-553 (complex 2)
no
membrane protein
2024-06-18
2025-04-09
electron microscopy
2.83
N.A.
N.A.
40118988
10.1038/s41422-025-01095-7
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
D
Q
MVSAIVLYVLLAAAAHSAFAEISEVQLVESGGGLVQPGGSLRLSCAASGFNVYSSSIHWVRQAPGKGLEWVASISSYYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSRQFWYSGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTAAAHHHHHHHH
MVSAIVLYVLLAAAAHSAFASDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYKYVPVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFNVYSSSIHWVRQAPGKGLEWVASISSYYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSRQFWYSGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
ASDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYKYVPVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
23.463964
22.822638
260
235
221
216
221
216
98
fab30 heavy chain
fab30 light chain
homo sapiens
homo sapiens
B
protein
beta-arrestin-1
homo sapiens
55
21
0.78
HL
train
8zyu_D_Q
8zyu
cryo-em structure of neurotensin receptor 1 in complex with beta-arrestin1 and sbi-553 (complex 1)
no
membrane protein
2024-06-18
2025-04-16
electron microscopy
2.65
N.A.
N.A.
40118988
10.1038/s41422-025-01095-7
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
D
Q
MVSAIVLYVLLAAAAHSAFAEISEVQLVESGGGLVQPGGSLRLSCAASGFNVYSSSIHWVRQAPGKGLEWVASISSYYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSRQFWYSGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTAAAHHHHHHHH
MVSAIVLYVLLAAAAHSAFASDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYKYVPVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFNVYSSSIHWVRQAPGKGLEWVASISSYYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSRQFWYSGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
ASDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYKYVPVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
23.422245
22.86314
260
235
221
216
221
216
97
fab30 heavy chain
fab30 light chain
homo sapiens
homo sapiens
B
protein
beta-arrestin-1
homo sapiens
57
21
0.75
HL
train
9ii3_S
9ii3
cryo-em structure of the 2:1 complex of mglu3 and beta-arrestin1
no
membrane protein
2024-06-19
2025-03-05
electron microscopy
3.9
N.A.
N.A.
40050438
10.1038/s41589-025-01858-8
0
auth_asym_id
scFv
N.A.
N.A.
S
N.A.
SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYKYVPVTFGQGTKVEIKGTTAASGSSGGSSSGAEVQLVESGGGLVQPGGSLRLSCAASGFNVYSSSIHWVRQAPGKGLEWVASISSYYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSRQFWYSGLDYWGQGTLVTVSSAHHHHHH
N.A.
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYKYVPVTFGQGTKVEIKGTTAASGSSGGSSSGAEVQLVESGGGLVQPGGSLRLSCAASGFNVYSSSIHWVRQAPGKGLEWVASISSYYGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARSRQFWYSGLDYWGQGTLVTV
N.A.
17.363394
0
251
0
222
0
241
0
0
scfv30
N.A.
mus musculus
N.A.
A
protein
beta-arrestin-1
homo sapiens
53
21
0.88
H_only
train
9cci_B_C
9cci
dissecting human monoclonal antibody responses from mrna and protein-based booster vaccinations against xbb1.5 sars-cov-2
yes
viral protein/immune system
2024-06-21
2025-03-12
electron microscopy
2.65
N.A.
N.A.
40456237
10.1016/j.lanmic.2025.101103
0
auth_asym_id
FabH:FabL
IGHV5
IGKV1
B
C
EVQLVQSGAEVKKPGESLKISCQGSGYSFSSFWIGWVRQMPGKGLEWMGIIYGGDSDTRYSPSFQGQVSISADKSLSTAYLQWSSLKPSDTAMYYCARTFGTYYDNTEDWFFDFWGHGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
DIQMTQSPSTLSASVGDRVTITCRASQRIGSWVAWYQQRPGKAPKFLIYNPSTLESGVPSRFSASGSGTEFTLTISSLQPDDFATYYCQQYDAFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
EVQLVQSGAEVKKPGESLKISCQGSGYSFSSFWIGWVRQMPGKGLEWMGIIYGGDSDTRYSPSFQGQVSISADKSLSTAYLQWSSLKPSDTAMYYCARTFGTYYDNTEDWFFDFWGHGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
IQMTQSPSTLSASVGDRVTITCRASQRIGSWVAWYQQRPGKAPKFLIYNPSTLESGVPSRFSASGSGTEFTLTISSLQPDDFATYYCQQYDAFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
23.286207
22.987156
228
209
226
208
226
208
97
m39 fab heavy chain
m39 fab light chain
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
30
15
1
HL
train
9ccg_B_C
9ccg
fusobacterium nucleatum bama-fab 9 complex
no
membrane protein
2024-06-21
2025-09-17
electron microscopy
3.87
N.A.
N.A.
40897170
10.1016/j.str.2025.08.008
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
B
C
EVQLVESGGGLVQPGGSLRLSCAASGFNVYSSSIHWVRQAPGKGLEWVASIYSYYGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGYSSYWLKSHQWPYGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
QMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQFSQRLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFNVYSSSIHWVRQAPGKGLEWVASIYSYYGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGYSSYWLKSHQWPYGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
QMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQFSQRLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
23.59858
22.828312
227
212
227
212
227
212
96
fab 9 heavy chain
fab 9 light chain
synthetic construct
synthetic construct
A
protein
potra domain-containing protein
fusobacterium nucleatum
70
19
0.66
HL
train
9ccg_F_E
9ccg
fusobacterium nucleatum bama-fab 9 complex
no
membrane protein
2024-06-21
2025-09-17
electron microscopy
3.87
N.A.
N.A.
40897170
10.1016/j.str.2025.08.008
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
F
E
EVQLVESGGGLVQPGGSLRLSCAASGFNVYSSSIHWVRQAPGKGLEWVASIYSYYGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGYSSYWLKSHQWPYGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
QMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQFSQRLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFNVYSSSIHWVRQAPGKGLEWVASIYSYYGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGYSSYWLKSHQWPYGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
QMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQFSQRLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
23.588686
22.824015
227
212
227
212
227
212
93
fab 9 heavy chain
fab 9 light chain
synthetic construct
synthetic construct
D
protein
potra domain-containing protein
fusobacterium nucleatum
69
20
0.67
HL
train
9ijd_D
9ijd
carazolol-activated human beta3 adrenergic receptor
no
membrane protein/immune system
2024-06-22
2024-08-21
electron microscopy
2.76
N.A.
N.A.
39046191
10.1002/cplu.202400288
0
auth_asym_id
scFv
N.A.
N.A.
D
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.233374
0
246
0
231
0
246
0
0
single-chain fv16
N.A.
homo sapiens
N.A.
B;A
protein;protein
guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(s) subunit alpha isoforms short
rattus norvegicus;bos taurus
26;34
11;22
0.79;0.92
H_only
train
9ijd_N
9ijd
carazolol-activated human beta3 adrenergic receptor
no
membrane protein/immune system
2024-06-22
2024-08-21
electron microscopy
2.76
N.A.
N.A.
39046191
10.1002/cplu.202400288
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS
N.A.
13.678767
0
128
0
128
0
128
0
0
camelid antibody vhh fragment
N.A.
lama glama
N.A.
B;A
protein;protein
guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(s) subunit alpha isoforms short
rattus norvegicus;bos taurus
36;43
12;12
0.63;0.55
H_only
train
9ije_D
9ije
epinephrine-activated human beta3 adrenergic receptor
no
membrane protein/immune system
2024-06-22
2024-08-21
electron microscopy
2.34
N.A.
N.A.
39046191
10.1002/cplu.202400288
0
auth_asym_id
scFv
N.A.
N.A.
D
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.39308
0
246
0
231
0
246
0
0
single-chain fv16
N.A.
homo sapiens
N.A.
B;A
protein;protein
guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(s) subunit alpha isoforms short
rattus norvegicus;bos taurus
22;30
9;21
0.82;1.0
H_only
train
9ije_N
9ije
epinephrine-activated human beta3 adrenergic receptor
no
membrane protein/immune system
2024-06-22
2024-08-21
electron microscopy
2.34
N.A.
N.A.
39046191
10.1002/cplu.202400288
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS
N.A.
13.780684
0
128
0
128
0
128
0
0
camelid antibody vhh fragment
N.A.
lama glama
N.A.
B;A
protein;protein
guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(s) subunit alpha isoforms short
rattus norvegicus;bos taurus
30;45
11;12
0.73;0.55
H_only
train
9cct_C_B
9cct
cryoem structure of escherichia coli fimch in complex with b7 fab
no
cell adhesion
2024-06-23
2025-07-02
electron microscopy
3.46
N.A.
N.A.
40540557
10.1126/sciadv.adw0698
0
auth_asym_id
FabH:FabL
IGHV1
IGKV3
C
B
TGVHSEVQLQQPGAELVRPGASVKMSCKASGYTFTIYNLHWVKQTPRQGLEWIGTIYPGDGDTSYNQKFKGKATLTVDKSSSTAYMQLSNLTSEDSAVYFCAREGDYGPWFAYWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCRSLVPRGSSGHHHHHH
TGVHSQIVLTQSPAIMSASPGEKVTMTCRASSSVSSSYLHWYQQKSGASPKLWIYSSSNLASGVPARFSGSGSGTSYSLTINSVEAEDAATYYCQHYGSYPLTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLQQPGAELVRPGASVKMSCKASGYTFTIYNLHWVKQTPRQGLEWIGTIYPGDGDTSYNQKFKGKATLTVDKSSSTAYMQLSNLTSEDSAVYFCAREGDYGPWFAYWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
QIVLTQSPAIMSASPGEKVTMTCRASSSVSSSYLHWYQQKSGASPKLWIYSSSNLASGVPARFSGSGSGTSYSLTINSVEAEDAATYYCQHYGSYPLTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
21.303932
23.378069
243
220
222
214
222
214
93
b7 heavy chain
b7 fab light chain
mus musculus
mus musculus
A
protein
type 1 fimbiral adhesin fimh
escherichia coli uti89
44
19
0.9
HL
train
9fte_B
9fte
cryo-em structure of the adhesion gpcr adgrv1 in complex with a nanobody
no
membrane protein
2024-06-24
2026-01-14
electron microscopy
3.82
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
MAEVQLVESGGGLVQPGGSLRLSCAASGSSFSINAMGWYRQAPGKQRELVAAISRGGSTNYASSVKGRFTISRDNGKNTVYLQMNSPKPEDTAVYYCNVGSRSTLPIWYDYWGQGTQVTVSSAAAEQKLISEEDLNGAAHHHHHHGS
N.A.
ESGGGLVQPGGSLRLSCAASGSSFSINAMGWYRQAPGKQRELVAAISRGGSTNYASSVKGRFTISRDNGKNTVYLQMNSPKPEDTAVYYCNVGSRSTLPIWYDYWGQ
N.A.
12.962342
0
147
0
107
0
107
0
0
nanobody re02
N.A.
vicugna pacos
N.A.
A
protein
adhesion g protein-coupled receptor v1
mus musculus
22
8
0.89
H_only
train
9cds_B_A
9cds
crystal structure of ospa st1 from b. burgdorferi bound to monoclonal antibody la-2
no
immune system
2024-06-25
2025-09-24
x-ray diffraction
1.85
0.233
0.202
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV7
IGKV1
B
A
QIQLVQSGPELKKPGETVKISCKASGYTFTDYSMYWVKQAPGKGLKRMGWINTETGEPTYADDFKGRFALSLDTSASTAYLHISNLKNEDTATYFCARGLDSWGQGTSVTVSSAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLEPS
DIQMTQSPSSLSATLGGKVTITCKASQDINKYIAWYQHKPGKGPRLLIHYTSTLQPGNPSRFSGSGSGRDYSFSISNLEAEDIAIYYCLQYDNLQRTFGGGTKVEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE
QIQLVQSGPELKKPGETVKISCKASGYTFTDYSMYWVKQAPGKGLKRMGWINTETGEPTYADDFKGRFALSLDTSASTAYLHISNLKNEDTATYFCARGLDSWGQGTSVTVSSAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLEPS
DIQMTQSPSSLSATLGGKVTITCKASQDINKYIAWYQHKPGKGPRLLIHYTSTLQPGNPSRFSGSGSGRDYSFSISNLEAEDIAIYYCLQYDNLQRTFGGGTKVEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE
21.71419
23.776247
213
213
210
213
213
213
89
hybridoma antibody la2 (heavy chain)
hybridoma antibody la2 (light chain)
mus musculus
mus musculus
C
protein
outer surface protein a
borreliella burgdorferi b31
49
18
0.67
HL
train
9cds_E_D
9cds
crystal structure of ospa st1 from b. burgdorferi bound to monoclonal antibody la-2
no
immune system
2024-06-25
2025-09-24
x-ray diffraction
1.85
0.233
0.202
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV7
IGKV1
E
D
QIQLVQSGPELKKPGETVKISCKASGYTFTDYSMYWVKQAPGKGLKRMGWINTETGEPTYADDFKGRFALSLDTSASTAYLHISNLKNEDTATYFCARGLDSWGQGTSVTVSSAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLEPS
DIQMTQSPSSLSATLGGKVTITCKASQDINKYIAWYQHKPGKGPRLLIHYTSTLQPGNPSRFSGSGSGRDYSFSISNLEAEDIAIYYCLQYDNLQRTFGGGTKVEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE
QIQLVQSGPELKKPGETVKISCKASGYTFTDYSMYWVKQAPGKGLKRMGWINTETGEPTYADDFKGRFALSLDTSASTAYLHISNLKNEDTATYFCARGLDSWGQGTSVTVSSAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLEPS
DIQMTQSPSSLSATLGGKVTITCKASQDINKYIAWYQHKPGKGPRLLIHYTSTLQPGNPSRFSGSGSGRDYSFSISNLEAEDIAIYYCLQYDNLQRTFGGGTKVEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR
21.849232
23.59512
213
213
211
211
213
211
90
hybridoma antibody la2 (heavy chain)
hybridoma antibody la2 (light chain)
mus musculus
mus musculus
F
protein
outer surface protein a
borreliella burgdorferi b31
48
17
0.65
HL
train
9fvb_C
9fvb
crystal structure of vcsiap in complex with a vhh antibody (vhh_vcp#2)
no
transport protein
2024-06-26
2024-11-06
x-ray diffraction
2.05
0.257
0.195
39580575
10.1038/s42003-024-07263-6
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
QVQLVESGGRLVQTGGSLRLSCAASGDTFSNYVMGWFRQAPGKEREFVAAISWTGANSYYADSVAGRFTISRDNAKNTVALQMNSLKPEDTAIYYCAADHFHVTHRKYDYWGQGTQVTVSSGGYPYDVPDYAGHHHHHH
N.A.
QVQLVESGGRLVQTGGSLRLSCAASGDTFSNYVMGWFRQAPGKEREFVAAISWTGANSYYADSVAGRFTISRDNAKNTVALQMNSLKPEDTAIYYCAADHFHVTHRKYDYWGQGTQVTVSS
N.A.
13.56205
0
139
0
121
0
121
0
0
vhh_vcp#2
N.A.
vicugna pacos
N.A.
A
protein
sialic acid-binding periplasmic protein siap
vibrio cholerae
26
11
0.85
H_only
train
9fvb_H
9fvb
crystal structure of vcsiap in complex with a vhh antibody (vhh_vcp#2)
no
transport protein
2024-06-26
2024-11-06
x-ray diffraction
2.05
0.257
0.195
39580575
10.1038/s42003-024-07263-6
0
auth_asym_id
VHH
IGHV3
N.A.
H
N.A.
QVQLVESGGRLVQTGGSLRLSCAASGDTFSNYVMGWFRQAPGKEREFVAAISWTGANSYYADSVAGRFTISRDNAKNTVALQMNSLKPEDTAIYYCAADHFHVTHRKYDYWGQGTQVTVSSGGYPYDVPDYAGHHHHHH
N.A.
QVQLVESGGRLVQTGGSLRLSCAASGDTFSNYVMGWFRQAPGKEREFVAAISWTGANSYYADSVAGRFTISRDNAKNTVALQMNSLKPEDTAIYYCAADHFHVTHRKYDYWGQGTQVTVSS
N.A.
13.546202
0
139
0
121
0
121
0
0
vhh_vcp#2
N.A.
vicugna pacos
N.A.
B
protein
sialic acid-binding periplasmic protein siap
vibrio cholerae
27
12
0.86
H_only
train
9fvc_H
9fvc
crystal structure of vcsiap in complex with a vhh antibody (vhh_vcp#1)
no
transport protein
2024-06-26
2024-11-06
x-ray diffraction
2.64
0.254
0.221
39580575
10.1038/s42003-024-07263-6
0
auth_asym_id
VHH
IGHV3
N.A.
H
N.A.
QVQLVESGGGLVQAGGSLRLSCAASGRTFSSSTMGWFRQAPGKEREFVAGISWSDGSTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDSAVYYCAAERWLATPQAMAVTPNALDAWGQGTQVTVSSGGYPYDVPDYAGHHHHHH
N.A.
QVQLVESGGGLVQAGGSLRLSCAASGRTFSSSTMGWFRQAPGKEREFVAGISWSDGSTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDSAVYYCAAERWLATPQAMAVTPNALDAWGQGTQVTVS
N.A.
13.586766
0
146
0
127
0
127
0
0
vhh_vcp#2
N.A.
vicugna pacos
N.A.
A
protein
sialic acid-binding periplasmic protein siap
vibrio cholerae
35
17
1
H_only
train
9fvc_C
9fvc
crystal structure of vcsiap in complex with a vhh antibody (vhh_vcp#1)
no
transport protein
2024-06-26
2024-11-06
x-ray diffraction
2.64
0.254
0.221
39580575
10.1038/s42003-024-07263-6
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
QVQLVESGGGLVQAGGSLRLSCAASGRTFSSSTMGWFRQAPGKEREFVAGISWSDGSTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDSAVYYCAAERWLATPQAMAVTPNALDAWGQGTQVTVSSGGYPYDVPDYAGHHHHHH
N.A.
QVQLVESGGGLVQAGGSLRLSCAASGRTFSSSTMGWFRQAPGKEREFVAGISWSDGSTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDSAVYYCAAERWLATPQAMAVTPNALDAWGQGTQVTVS
N.A.
13.601049
0
146
0
127
0
127
0
0
vhh_vcp#2
N.A.
vicugna pacos
N.A.
B
protein
sialic acid-binding periplasmic protein siap
vibrio cholerae
34
17
1
H_only
train
9fve_B
9fve
crystal structure of vcsiap w73a mutant in complex with sialic acid and a vhh antibody (vhh_vcp#2)
yes
transport protein
2024-06-26
2024-11-06
x-ray diffraction
2.81
0.267
0.234
39580575
10.1038/s42003-024-07263-6
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
GSQVQLVESGGRLVQTGGSLRLSCAASGDTFSNYVMGWFRQAPGKEREFVAAISWTGANSYYADSVAGRFTISRDNAKNTVALQMNSLKPEDTAIYYCAADHFHVTHRKYDYWGQGTQVTVSS
N.A.
SQVQLVESGGRLVQTGGSLRLSCAASGDTFSNYVMGWFRQAPGKEREFVAAISWTGANSYYADSVAGRFTISRDNAKNTVALQMNSLKPEDTAIYYCAADHFHVTHRKYDYWGQGTQVTVSS
N.A.
13.601696
0
123
0
122
0
122
0
0
vhh_vcp#2
N.A.
vicugna pacos
N.A.
A
protein
sialic acid-binding periplasmic protein siap
vicugna pacos
31
13
0.81
H_only
train
9fve_D
9fve
crystal structure of vcsiap w73a mutant in complex with sialic acid and a vhh antibody (vhh_vcp#2)
yes
transport protein
2024-06-26
2024-11-06
x-ray diffraction
2.81
0.267
0.234
39580575
10.1038/s42003-024-07263-6
0
auth_asym_id
VHH
IGHV3
N.A.
D
N.A.
GSQVQLVESGGRLVQTGGSLRLSCAASGDTFSNYVMGWFRQAPGKEREFVAAISWTGANSYYADSVAGRFTISRDNAKNTVALQMNSLKPEDTAIYYCAADHFHVTHRKYDYWGQGTQVTVSS
N.A.
QVQLVESGGRLVQTGGSLRLSCAASGDTFSNYVMGWFRQAPGKEREFVAAISWTGANSYYADSVAGRFTISRDNAKNTVALQMNSLKPEDTAIYYCAADHFHVTHRKYDYWGQGTQVTVSS
N.A.
13.585831
0
123
0
121
0
121
0
0
vhh_vcp#2
N.A.
vicugna pacos
N.A.
C
protein
sialic acid-binding periplasmic protein siap
vicugna pacos
27
13
0.87
H_only
train
9fve_F
9fve
crystal structure of vcsiap w73a mutant in complex with sialic acid and a vhh antibody (vhh_vcp#2)
yes
transport protein
2024-06-26
2024-11-06
x-ray diffraction
2.81
0.267
0.234
39580575
10.1038/s42003-024-07263-6
0
auth_asym_id
VHH
IGHV3
N.A.
F
N.A.
GSQVQLVESGGRLVQTGGSLRLSCAASGDTFSNYVMGWFRQAPGKEREFVAAISWTGANSYYADSVAGRFTISRDNAKNTVALQMNSLKPEDTAIYYCAADHFHVTHRKYDYWGQGTQVTVSS
N.A.
GSQVQLVESGGRLVQTGGSLRLSCAASGDTFSNYVMGWFRQAPGKEREFVAAISWTGANSYYADSVAGRFTISRDNAKNTVALQMNSLKPEDTAIYYCAADHFHVTHRKYDYWGQGTQVTVSS
N.A.
13.594188
0
123
0
123
0
123
0
0
vhh_vcp#2
N.A.
vicugna pacos
N.A.
E
protein
sialic acid-binding periplasmic protein siap
vicugna pacos
33
13
0.76
H_only
train
9fve_H
9fve
crystal structure of vcsiap w73a mutant in complex with sialic acid and a vhh antibody (vhh_vcp#2)
yes
transport protein
2024-06-26
2024-11-06
x-ray diffraction
2.81
0.267
0.234
39580575
10.1038/s42003-024-07263-6
0
auth_asym_id
VHH
IGHV3
N.A.
H
N.A.
GSQVQLVESGGRLVQTGGSLRLSCAASGDTFSNYVMGWFRQAPGKEREFVAAISWTGANSYYADSVAGRFTISRDNAKNTVALQMNSLKPEDTAIYYCAADHFHVTHRKYDYWGQGTQVTVSS
N.A.
GSQVQLVESGGRLVQTGGSLRLSCAASGDTFSNYVMGWFRQAPGKEREFVAAISWTGANSYYADSVAGRFTISRDNAKNTVALQMNSLKPEDTAIYYCAADHFHVTHRKYDYWGQGTQVTVSS
N.A.
13.643054
0
123
0
123
0
123
0
0
vhh_vcp#2
N.A.
vicugna pacos
N.A.
G
protein
sialic acid-binding periplasmic protein siap
vicugna pacos
31
13
0.81
H_only
train