PDB_ID_chain stringlengths 6 10 | PDB_ID stringlengths 4 4 | Title stringlengths 4 230 | Mutation(s) stringclasses 2
values | Classification stringclasses 305
values | Deposit_date stringdate 1976-03-17 00:00:00 2026-01-20 00:00:00 | Release_date stringdate 1976-05-19 00:00:00 2026-02-25 00:00:00 | Method stringclasses 5
values | Resolution stringclasses 459
values | R_free stringclasses 227
values | R_work stringclasses 211
values | PMID stringlengths 4 8 | DOI stringlengths 4 68 | Model_index int64 0 76 | Asym_ID_type stringclasses 2
values | Ab_type stringclasses 30
values | H_subgroup stringclasses 8
values | L_subgroup stringclasses 19
values | H_chain_ID stringclasses 60
values | L_chain_ID stringclasses 58
values | H_fas_seq stringlengths 4 919 | L_fas_seq stringlengths 4 627 | H_filled_pdb_seq stringlengths 4 896 | L_filled_pdb_seq stringlengths 4 523 | H_mean_radius float64 0 79.7 | L_mean_radius float64 0 84.3 | H_fas_seq_len int64 0 919 | L_fas_seq_len int64 0 627 | H_pdb_seq_len int64 0 879 | L_pdb_seq_len int64 0 523 | H_filled_seq_len int64 0 896 | L_filled_seq_len int64 0 523 | HL_inf_res_num int64 0 175 | H_mol_name stringlengths 2 331 | L_mol_name stringlengths 2 151 | H_species stringclasses 68
values | L_species stringclasses 42
values | Ag_chain_ID(s) stringclasses 279
values | Ag_type(s) stringclasses 16
values | Ag_mol_name(s) stringlengths 2 390 | Ag_species stringclasses 743
values | Ab_ag_inf_res_num stringlengths 1 11 | CDR_inf_res_num stringclasses 444
values | CDR_inf_res_ratio stringlengths 1 19 | hl_label stringclasses 3
values | split stringclasses 1
value |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
9leo_A_B | 9leo | layv-g head in complex of layg-1069 and layg-1133 | no | viral protein/immune system | 2025-01-07 | 2025-10-01 | electron microscopy | 2.92 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV3 | A | B | DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQFPGNKLEWMGSIHFSGISNYNPSLKGRISITRDTSKNQFFLQLNSVTTEDTATYYCVRKDFGSSHHFDYWGQGTTLTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | SIVMTQTPKFLLVSAGDRVAMTCKASQSVNDDVAWYQQKPGQSPKLLINFASNRYTGVPDRFTGSGYGTDFTFTISTVQAEDLAFYFCQQDYSSPFTFGSGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | DVQLQESGPDLVKPSQSLSLTCTVTGYSITSGYSWHWIRQFPGNKLEWMGSIHFSGISNYNPSLKGRISITRDTSKNQFFLQLNSVTTEDTATYYCVRKDFGSSHHFDYWGQGTTLTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK | SIVMTQTPKFLLVSAGDRVAMTCKASQSVNDDVAWYQQKPGQSPKLLINFASNRYTGVPDRFTGSGYGTDFTFTISTVQAEDLAFYFCQQDYSSPFTFGSGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEV | 20.615671 | 23.589266 | 223 | 214 | 210 | 196 | 217 | 196 | 80 | layg-1069 heavy chain | layg-1069 light chain | mus musculus | mus musculus | H | protein | attachment glycoprotein | langya virus | 50 | 20 | 0.77 | HL | train |
9leo_C_D | 9leo | layv-g head in complex of layg-1069 and layg-1133 | no | viral protein/immune system | 2025-01-07 | 2025-10-01 | electron microscopy | 2.92 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | C | D | DVQLQESGPGLVKPSQSLSLTCTVTGYSITSDYAWNWIRQFPGNKLEWMGYISYSGSTSYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYCARYYDAPYYFDYWGQGTTLTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQMTQSPASLSASVGETVTITCGASENIYGALNWYQRKQGKSPQLLIYGATNLADGMSSRFSGSGSGRQYSLKISSLHPDDVATYYCQNVLSTPFTFGSGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | DVQLQESGPGLVKPSQSLSLTCTVTGYSITSDYAWNWIRQFPGNKLEWMGYISYSGSTSYNPSLKSRISITRDTSKNQFFLQLNSVTTEDTATYYCARYYDAPYYFDYWGQGTTLTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVT | DIQMTQSPASLSASVGETVTITCGASENIYGALNWYQRKQGKSPQLLIYGATNLADGMSSRFSGSGSGRQYSLKISSLHPDDVATYYCQNVLSTPFTFGSGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKS | 18.738565 | 23.071442 | 222 | 214 | 174 | 200 | 189 | 208 | 75 | layg-1133 heavy chain | layg-1133 light chain | mus musculus | mus musculus | H | protein | attachment glycoprotein | langya virus | 47 | 19 | 0.76 | HL | train |
9hxo_C_D | 9hxo | a01 mabs bound to cobratoxin at ph 6.0 | no | toxin | 2025-01-07 | 2025-11-19 | x-ray diffraction | 1.49 | 0.248 | 0.203 | 40936197 | 10.1080/19420862.2025.2553624 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV3 | C | D | AQVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELRSLRSDDTAVYYCARDNLGYCSGGSCYSDYYYYYMDVWGQGTLVTVSSGGGGSGGGGSGG | GASSYELTQPPSVSVAPGRTATITCEGDNIGQQIVHWYQQKPGQAPVAVISSDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSGSDHVVFGGGTKVTVLENLYFQ | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELRSLRSDDTAVYYCARDNLGYCSGGSCYSDYYYYYMDVWGQGTLVTVSS | SSYELTQPPSVSVAPGRTATITCEGDNIGQQIVHWYQQKPGQAPVAVISSDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSGSDHVVFGGGTKVTVLENLYFQ | 14.444123 | 14.435796 | 144 | 117 | 131 | 115 | 131 | 115 | 41 | light chain | heavy chain | homo sapiens | homo sapiens | A;B | protein;protein | alpha-cobratoxin;alpha-cobratoxin | naja kaouthia;naja kaouthia | 41;25 | 21;9 | 1.0;0.69 | HL | train |
9hxo_I_M | 9hxo | a01 mabs bound to cobratoxin at ph 6.0 | no | toxin | 2025-01-07 | 2025-11-19 | x-ray diffraction | 1.49 | 0.248 | 0.203 | 40936197 | 10.1080/19420862.2025.2553624 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV3 | I | M | AQVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELRSLRSDDTAVYYCARDNLGYCSGGSCYSDYYYYYMDVWGQGTLVTVSSGGGGSGGGGSGG | GASSYELTQPPSVSVAPGRTATITCEGDNIGQQIVHWYQQKPGQAPVAVISSDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSGSDHVVFGGGTKVTVLENLYFQ | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELRSLRSDDTAVYYCARDNLGYCSGGSCYSDYYYYYMDVWGQGTLVTVSS | SSYELTQPPSVSVAPGRTATITCEGDNIGQQIVHWYQQKPGQAPVAVISSDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSGSDHVVFGGGTKVTVLENLYFQ | 14.47116 | 14.414981 | 144 | 117 | 131 | 115 | 131 | 115 | 43 | light chain | heavy chain | homo sapiens | homo sapiens | A;B | protein;protein | alpha-cobratoxin;alpha-cobratoxin | naja kaouthia;naja kaouthia | 25;42 | 9;22 | 0.64;1.0 | HL | train |
9lf8_H_L | 9lf8 | structure of mpxv m1r and mmm1-16 fab complex | no | viral protein/immune system | 2025-01-08 | 2025-10-01 | x-ray diffraction | 2.7 | 0.274 | 0.202 | 40921877 | 10.1038/s44321-025-00299-z | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | H | L | QIQLQQSGAELARPGASVKLSCKASGYTFITYWIQWVKQRPGQGLEWIGAIYPGDGDTRYTQKFKAKATLTADKSSSTAYMQLSTLTSEDSAVYFCAKGDTYPAAMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKT | DIQMTQSPASLSASVGETVTITCRTSGNIHNYLAWYQQKQGRSPQLLVNNAKTLADGVPSRFSGSGSGTQYSLKINSLQPEDIGSYYCQHFWITPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS | QIQLQQSGAELARPGASVKLSCKASGYTFITYWIQWVKQRPGQGLEWIGAIYPGDGDTRYTQKFKAKATLTADKSSSTAYMQLSTLTSEDSAVYFCAKGDTYPAAMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | DIQMTQSPASLSASVGETVTITCRTSGNIHNYLAWYQQKQGRSPQLLVNNAKTLADGVPSRFSGSGSGTQYSLKINSLQPEDIGSYYCQHFWITPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 20.470049 | 23.440317 | 225 | 215 | 214 | 212 | 219 | 212 | 94 | mmm1-16 fab heavy chain | mmm1-16 fab light chain | mus musculus | mus musculus | Q | protein | entry-fusion complex associated protein opg095 | monkeypox virus | 24 | 13 | 0.93 | HL | train |
9lf8_F_E | 9lf8 | structure of mpxv m1r and mmm1-16 fab complex | no | viral protein/immune system | 2025-01-08 | 2025-10-01 | x-ray diffraction | 2.7 | 0.274 | 0.202 | 40921877 | 10.1038/s44321-025-00299-z | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | F | E | QIQLQQSGAELARPGASVKLSCKASGYTFITYWIQWVKQRPGQGLEWIGAIYPGDGDTRYTQKFKAKATLTADKSSSTAYMQLSTLTSEDSAVYFCAKGDTYPAAMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKT | DIQMTQSPASLSASVGETVTITCRTSGNIHNYLAWYQQKQGRSPQLLVNNAKTLADGVPSRFSGSGSGTQYSLKINSLQPEDIGSYYCQHFWITPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS | QIQLQQSGAELARPGASVKLSCKASGYTFITYWIQWVKQRPGQGLEWIGAIYPGDGDTRYTQKFKAKATLTADKSSSTAYMQLSTLTSEDSAVYFCAKGDTYPAAMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDK | DIQMTQSPASLSASVGETVTITCRTSGNIHNYLAWYQQKQGRSPQLLVNNAKTLADGVPSRFSGSGSGTQYSLKINSLQPEDIGSYYCQHFWITPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKS | 18.975624 | 22.055635 | 225 | 215 | 196 | 196 | 215 | 208 | 92 | mmm1-16 fab heavy chain | mmm1-16 fab light chain | mus musculus | mus musculus | R | protein | entry-fusion complex associated protein opg095 | monkeypox virus | 25 | 14 | 0.93 | HL | train |
9lf8_D_C | 9lf8 | structure of mpxv m1r and mmm1-16 fab complex | no | viral protein/immune system | 2025-01-08 | 2025-10-01 | x-ray diffraction | 2.7 | 0.274 | 0.202 | 40921877 | 10.1038/s44321-025-00299-z | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | D | C | QIQLQQSGAELARPGASVKLSCKASGYTFITYWIQWVKQRPGQGLEWIGAIYPGDGDTRYTQKFKAKATLTADKSSSTAYMQLSTLTSEDSAVYFCAKGDTYPAAMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKT | DIQMTQSPASLSASVGETVTITCRTSGNIHNYLAWYQQKQGRSPQLLVNNAKTLADGVPSRFSGSGSGTQYSLKINSLQPEDIGSYYCQHFWITPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS | QIQLQQSGAELARPGASVKLSCKASGYTFITYWIQWVKQRPGQGLEWIGAIYPGDGDTRYTQKFKAKATLTADKSSSTAYMQLSTLTSEDSAVYFCAKGDTYPAAMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | DIQMTQSPASLSASVGETVTITCRTSGNIHNYLAWYQQKQGRSPQLLVNNAKTLADGVPSRFSGSGSGTQYSLKINSLQPEDIGSYYCQHFWITPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 20.496279 | 23.355839 | 225 | 215 | 214 | 212 | 219 | 212 | 94 | mmm1-16 fab heavy chain | mmm1-16 fab light chain | mus musculus | mus musculus | S | protein | entry-fusion complex associated protein opg095 | monkeypox virus | 26 | 14 | 0.93 | HL | train |
9lf8_O_J | 9lf8 | structure of mpxv m1r and mmm1-16 fab complex | no | viral protein/immune system | 2025-01-08 | 2025-10-01 | x-ray diffraction | 2.7 | 0.274 | 0.202 | 40921877 | 10.1038/s44321-025-00299-z | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | O | J | QIQLQQSGAELARPGASVKLSCKASGYTFITYWIQWVKQRPGQGLEWIGAIYPGDGDTRYTQKFKAKATLTADKSSSTAYMQLSTLTSEDSAVYFCAKGDTYPAAMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKT | DIQMTQSPASLSASVGETVTITCRTSGNIHNYLAWYQQKQGRSPQLLVNNAKTLADGVPSRFSGSGSGTQYSLKINSLQPEDIGSYYCQHFWITPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS | QIQLQQSGAELARPGASVKLSCKASGYTFITYWIQWVKQRPGQGLEWIGAIYPGDGDTRYTQKFKAKATLTADKSSSTAYMQLSTLTSEDSAVYFCAKGDTYPAAMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP | DIQMTQSPASLSASVGETVTITCRTSGNIHNYLAWYQQKQGRSPQLLVNNAKTLADGVPSRFSGSGSGTQYSLKINSLQPEDIGSYYCQHFWITPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 20.46174 | 23.39021 | 225 | 215 | 214 | 212 | 219 | 212 | 96 | mmm1-16 fab heavy chain | mmm1-16 fab light chain | mus musculus | mus musculus | T | protein | entry-fusion complex associated protein opg095 | monkeypox virus | 25 | 14 | 0.93 | HL | train |
9ms8_H_L | 9ms8 | ptch1 in complex with fab6h3 | no | membrane protein/immune system | 2025-01-09 | 2025-04-02 | electron microscopy | 3.73 | N.A. | N.A. | 40128518 | 10.1038/s41421-025-00772-6 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | EVQLVESGGGLVKPGGSRKLSCVASGFTLSDYGMHWVRQAPEKGLEWVAYIGSDSYTIYHADTMKGRFTISRDNAKNTLFLQMTSLRSEDTAMYYCGRNYGMDYWGQGTS | VLTQSPAIMSASLGERVTLTCTASSSVTSSYLHWYQQKPGSSPKLWIYSTSNLPFGVSPRFSGSGSGTSFSLTISSMEAEDAATYYCHQFHRSPYTFGGGTK | VQLVESGGGLVKPGGSRKLSCVASGFTLSDYGMHWVRQAPEKGLEWVAYIGSDSYTIYHADTMKGRFTISRDNAKNTLFLQMTSLRSEDTAMYYCGRNYGMDYWGQGTS | VLTQSPAIMSASLGERVTLTCTASSSVTSSYLHWYQQKPGSSPKLWIYSTSNLPFGVSPRFSGSGSGTSFSLTISSMEAEDAATYYCHQFHRSPYTFGGGTK | 13.299443 | 12.9491 | 110 | 102 | 109 | 102 | 109 | 102 | 38 | 6h3 fab heavy chain | 6h3 fab light chain | mus musculus | mus musculus | A | protein | protein patched homolog 1 | homo sapiens | 46 | 17 | 0.68 | HL | train |
9mrz_H_L | 9mrz | structure of hcv broadly neutralizing antibody rm1-73 | no | immune system | 2025-01-09 | 2026-01-14 | x-ray diffraction | 2.03 | 0.196 | 0.17 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | H | L | QVQLVQSGAEVKKPGASVRLSCKASGFTFSISAIGWVRQAPGQGLEWMGEIIPLVGITNYAQKFQGRVTITADTSTSTAYMDLSSLRSEDTAVYYCARGDSKLQSVAAGGTEGGNGLDSWGQGVVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK | DIQMTQSPSSLSASVGDRVTITCRASENVKNYLHWYQQKPGKAPKLLIYGASTLQSGVPSRFSGSGSGTDFILTISSLQSEDVATYYCQHSYDTPYSFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGEC | VQLVQSGAEVKKPGASVRLSCKASGFTFSISAIGWVRQAPGQGLEWMGEIIPLVGITNYAQKFQGRVTITADTSTSTAYMDLSSLRSEDTAVYYCARGDSKLQSVAAGGTEGGNGLDSWGQGVVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRASENVKNYLHWYQQKPGKAPKLLIYGASTLQSGVPSRFSGSGSGTDFILTISSLQSEDVATYYCQHSYDTPYSFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGEC | 21.303694 | 23.580889 | 235 | 212 | 230 | 212 | 230 | 212 | 110 | rm1-73 fab heavy chain | rm1-73 fab light chain | macaca mulatta | macaca mulatta | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9mrz_h_l | 9mrz | structure of hcv broadly neutralizing antibody rm1-73 | no | immune system | 2025-01-09 | 2026-01-14 | x-ray diffraction | 2.03 | 0.196 | 0.17 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | h | l | QVQLVQSGAEVKKPGASVRLSCKASGFTFSISAIGWVRQAPGQGLEWMGEIIPLVGITNYAQKFQGRVTITADTSTSTAYMDLSSLRSEDTAVYYCARGDSKLQSVAAGGTEGGNGLDSWGQGVVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK | DIQMTQSPSSLSASVGDRVTITCRASENVKNYLHWYQQKPGKAPKLLIYGASTLQSGVPSRFSGSGSGTDFILTISSLQSEDVATYYCQHSYDTPYSFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGEC | VQLVQSGAEVKKPGASVRLSCKASGFTFSISAIGWVRQAPGQGLEWMGEIIPLVGITNYAQKFQGRVTITADTSTSTAYMDLSSLRSEDTAVYYCARGDSKLQSVAAGGTEGGNGLDSWGQGVVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | DIQMTQSPSSLSASVGDRVTITCRASENVKNYLHWYQQKPGKAPKLLIYGASTLQSGVPSRFSGSGSGTDFILTISSLQSEDVATYYCQHSYDTPYSFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGEC | 22.425175 | 23.295332 | 235 | 212 | 231 | 212 | 231 | 212 | 113 | rm1-73 fab heavy chain | rm1-73 fab light chain | macaca mulatta | macaca mulatta | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9ms9_H_L | 9ms9 | structure of hcv neutralizing antibody rm5-16 | no | immune system | 2025-01-09 | 2026-01-14 | x-ray diffraction | 1.46 | 0.175 | 0.143 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGLV1 | H | L | QLQLQESGPGLMKPSETLSLTCAVSGGSISSHYWSWIRQSPGKGLEWIGYIYGGTGRTNYNPSLKSRVTISTDTSKNQFSLNLSSVTAADTAMYYCARYPGSHWENSLDVWGRGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | QSVLTQPPSVSGAPGQRVTISCTGHSSNIGGYFVSWYQQLPGTTPKLLIYQDNKRPSGVSDRFSGSKSDTTASLTITGLQTEDEADYYCLSYDNSLSAQVFGGGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | LQLQESGPGLMKPSETLSLTCAVSGGSISSHYWSWIRQSPGKGLEWIGYIYGGTGRTNYNPSLKSRVTISTDTSKNQFSLNLSSVTAADTAMYYCARYPGSHWENSLDVWGRGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | VLTQPPSVSGAPGQRVTISCTGHSSNIGGYFVSWYQQLPGTTPKLLIYQDNKRPSGVSDRFSGSKSDTTASLTITGLQTEDEADYYCLSYDNSLSAQVFGGGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP | 21.398527 | 23.587244 | 224 | 216 | 221 | 210 | 221 | 210 | 93 | rm5-16 fab heavy chain | rm5-16 fab light chain | macaca mulatta | macaca mulatta | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9msc_A_B | 9msc | structure of hepatitis c virus envelope glycoprotein hcv-1 e2ecto from genotype 1a bound to neutralizing antibody rm5-16 | no | viral protein/immune system | 2025-01-09 | 2026-01-14 | x-ray diffraction | 3.39 | 0.317 | 0.278 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGLV1 | A | B | QVQLVQSGAEVKKPGASVKVSCKASGYIFTSHGISWVRQAPGQGLEWMGWISVYNGYTNYAQNLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYFCARASQIRGVDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGS | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQFPGTAPKLLIYGNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSGPWVFGGGTQVTVLGQPVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGEC | QVQLVQSGAEVKKPGASVKVSCKASGYIFTSHGISWVRQAPGQGLEWMGWISVYNGYTNYAQNLQGRVTMTTDTSTSTAYMELRSLRSDDTAVYFCARASQIRGVDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQFPGTAPKLLIYGNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCAAWDDSLSGPWVFGGGTQVTVLGQPVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTQGTTSVTKSFNRGEC | 22.65169 | 23.581617 | 223 | 217 | 220 | 217 | 220 | 217 | 99 | hepc46 fab hc | hepc46 fab lc | homo sapiens | homo sapiens | E | protein | envelope glycoprotein e2 | hepatitis c virus (isolate 1) | 50 | 18 | 0.75 | HL | train |
9msc_H_L | 9msc | structure of hepatitis c virus envelope glycoprotein hcv-1 e2ecto from genotype 1a bound to neutralizing antibody rm5-16 | no | viral protein/immune system | 2025-01-09 | 2026-01-14 | x-ray diffraction | 3.39 | 0.317 | 0.278 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGLV1 | H | L | QLQLQESGPGLMKPSETLSLTCAVSGGSISSHYWSWIRQSPGKGLEWIGYIYGGTGRTNYNPSLKSRVTISTDTSKNQFSLNLSSVTAADTAMYYCARYPGSHWENSLDVWGRGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | QSVLTQPPSVSGAPGQRVTISCTGHSSNIGGYFVSWYQQLPGTTPKLLIYQDNKRPSGVSDRFSGSKSDTTASLTITGLQTEDEADYYCLSYDNSLSAQVFGGGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | LQLQESGPGLMKPSETLSLTCAVSGGSISSHYWSWIRQSPGKGLEWIGYIYGGTGRTNYNPSLKSRVTISTDTSKNQFSLNLSSVTAADTAMYYCARYPGSHWENSLDVWGRGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | VLTQPPSVSGAPGQRVTISCTGHSSNIGGYFVSWYQQLPGTTPKLLIYQDNKRPSGVSDRFSGSKSDTTASLTITGLQTEDEADYYCLSYDNSLSAQVFGGGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV | 21.476412 | 23.690481 | 224 | 216 | 221 | 208 | 221 | 208 | 99 | rm5-16 fan hc | rm5-16 fab lc | macaca mulatta | macaca mulatta | E | protein | envelope glycoprotein e2 | hepatitis c virus (isolate 1) | 35 | 15 | 0.79 | HL | train |
9lgm_N | 9lgm | cryo-em structure of gpr4 complexed with gs in ph8.0 | yes | signaling protein/immune system | 2025-01-10 | 2025-04-23 | electron microscopy | 2.84 | N.A. | N.A. | 40211064 | 10.1038/s41422-025-01092-w | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MKYLLPTAAAGLLLLAAQPAMAMQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHH | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVS | N.A. | 13.488823 | 0 | 157 | 0 | 127 | 0 | 127 | 0 | 0 | nanobody 35 | N.A. | lama glama | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 48;32 | 14;11 | 0.58;0.69 | H_only | train |
9msy_G_I | 9msy | g002-480-0546 fab in complex with v703-0537_t278m_l14 sosip and bg18 fab | no | viral protein/immune system | 2025-01-10 | 2025-05-28 | electron microscopy | 3.4 | N.A. | N.A. | 40373112 | 10.1126/science.adr8382 | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV3 | G | I | QVQLRESGPGLVKPSETLSLSCTVSNDSRPSDHSWTWVRQSPGKALEWIGDIHYNGATTYNPSLRSRVRIELDQSIPRFSLKMTSMTAADTGMYYCARNAIRIYGVVALGEWFHYGMDVWGQGTAVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | SSELTQPPSVSVSPGQTARITCSGAPLTSRFTYWYRQKPGQAPVLIISRSSQRSSGWSGRFSASWSGTTVTLTIRGVQADDEADYYCQSSDTSDSYKMFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | VQLRESGPGLVKPSETLSLSCTVSNDSRPSDHSWTWVRQSPGKALEWIGDIHYNGATTYNPSLRSRVRIELDQSIPRFSLKMTSMTAADTGMYYCARNAIRIYGVVALGEWFHYGMDVWGQGTAVT | ELTQPPSVSVSPGQTARITCSGAPLTSRFTYWYRQKPGQAPVLIISRSSQRSSGWSGRFSASWSGTTVTLTIRGVQADDEADYYCQSSDTSDSYKMFGGGTKLTVL | 14.796728 | 13.517264 | 233 | 214 | 126 | 106 | 126 | 106 | 51 | bg18 fab heavy chain | bg18 fab light chain | homo sapiens | homo sapiens | A | protein | v703-0537_t278m_l14 sosip | human immunodeficiency virus 1 | 22 | 10 | 1 | HL | train |
9msy_H_L | 9msy | g002-480-0546 fab in complex with v703-0537_t278m_l14 sosip and bg18 fab | no | viral protein/immune system | 2025-01-10 | 2025-05-28 | electron microscopy | 3.4 | N.A. | N.A. | 40373112 | 10.1126/science.adr8382 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | H | L | QVQLVQSGAELKKPGASVKVSCKASGYTFTDSYMHWVRQAPGQGLEWMGWINPNYGATNYAHKFQGRVTMTRDTSITTAYMELNRLRSDDTAVYYCARGNFLRVDYTWDFQHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGEGATLSCRTSQSLSSSSLAWYQQKPGLAPRLLIYGASIRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYEFFGAGTRVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVQSGAELKKPGASVKVSCKASGYTFTDSYMHWVRQAPGQGLEWMGWINPNYGATNYAHKFQGRVTMTRDTSITTAYMELNRLRSDDTAVYYCARGNFLRVDYTWDFQHWGQGTLVT | EIVLTQSPGTLSLSPGEGATLSCRTSQSLSSSSLAWYQQKPGLAPRLLIYGASIRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYEFFGAGTRVE | 13.97298 | 13.118536 | 226 | 211 | 119 | 102 | 119 | 102 | 42 | g002-480-0546 fab heavy chain | g002-480-0546 fab light chain | homo sapiens | homo sapiens | A | protein | v703-0537_t278m_l14 sosip | human immunodeficiency virus 1 | 58 | 15 | 0.56 | HL | train |
9msy_J_M | 9msy | g002-480-0546 fab in complex with v703-0537_t278m_l14 sosip and bg18 fab | no | viral protein/immune system | 2025-01-10 | 2025-05-28 | electron microscopy | 3.4 | N.A. | N.A. | 40373112 | 10.1126/science.adr8382 | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV3 | J | M | QVQLRESGPGLVKPSETLSLSCTVSNDSRPSDHSWTWVRQSPGKALEWIGDIHYNGATTYNPSLRSRVRIELDQSIPRFSLKMTSMTAADTGMYYCARNAIRIYGVVALGEWFHYGMDVWGQGTAVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | SSELTQPPSVSVSPGQTARITCSGAPLTSRFTYWYRQKPGQAPVLIISRSSQRSSGWSGRFSASWSGTTVTLTIRGVQADDEADYYCQSSDTSDSYKMFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | VQLRESGPGLVKPSETLSLSCTVSNDSRPSDHSWTWVRQSPGKALEWIGDIHYNGATTYNPSLRSRVRIELDQSIPRFSLKMTSMTAADTGMYYCARNAIRIYGVVALGEWFHYGMDVWGQGTAVT | ELTQPPSVSVSPGQTARITCSGAPLTSRFTYWYRQKPGQAPVLIISRSSQRSSGWSGRFSASWSGTTVTLTIRGVQADDEADYYCQSSDTSDSYKMFGGGTKLTVL | 14.796726 | 13.517269 | 233 | 214 | 126 | 106 | 126 | 106 | 51 | bg18 fab heavy chain | bg18 fab light chain | homo sapiens | homo sapiens | B | protein | v703-0537_t278m_l14 sosip | human immunodeficiency virus 1 | 22 | 10 | 1 | HL | train |
9msy_K_N | 9msy | g002-480-0546 fab in complex with v703-0537_t278m_l14 sosip and bg18 fab | no | viral protein/immune system | 2025-01-10 | 2025-05-28 | electron microscopy | 3.4 | N.A. | N.A. | 40373112 | 10.1126/science.adr8382 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | K | N | QVQLVQSGAELKKPGASVKVSCKASGYTFTDSYMHWVRQAPGQGLEWMGWINPNYGATNYAHKFQGRVTMTRDTSITTAYMELNRLRSDDTAVYYCARGNFLRVDYTWDFQHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGEGATLSCRTSQSLSSSSLAWYQQKPGLAPRLLIYGASIRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYEFFGAGTRVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVQSGAELKKPGASVKVSCKASGYTFTDSYMHWVRQAPGQGLEWMGWINPNYGATNYAHKFQGRVTMTRDTSITTAYMELNRLRSDDTAVYYCARGNFLRVDYTWDFQHWGQGTLVT | EIVLTQSPGTLSLSPGEGATLSCRTSQSLSSSSLAWYQQKPGLAPRLLIYGASIRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYEFFGAGTRVE | 13.972974 | 13.118544 | 226 | 211 | 119 | 102 | 119 | 102 | 42 | g002-480-0546 fab heavy chain | g002-480-0546 fab light chain | homo sapiens | homo sapiens | B | protein | v703-0537_t278m_l14 sosip | human immunodeficiency virus 1 | 58 | 15 | 0.56 | HL | train |
9msy_O_Q | 9msy | g002-480-0546 fab in complex with v703-0537_t278m_l14 sosip and bg18 fab | no | viral protein/immune system | 2025-01-10 | 2025-05-28 | electron microscopy | 3.4 | N.A. | N.A. | 40373112 | 10.1126/science.adr8382 | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV3 | O | Q | QVQLRESGPGLVKPSETLSLSCTVSNDSRPSDHSWTWVRQSPGKALEWIGDIHYNGATTYNPSLRSRVRIELDQSIPRFSLKMTSMTAADTGMYYCARNAIRIYGVVALGEWFHYGMDVWGQGTAVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | SSELTQPPSVSVSPGQTARITCSGAPLTSRFTYWYRQKPGQAPVLIISRSSQRSSGWSGRFSASWSGTTVTLTIRGVQADDEADYYCQSSDTSDSYKMFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | VQLRESGPGLVKPSETLSLSCTVSNDSRPSDHSWTWVRQSPGKALEWIGDIHYNGATTYNPSLRSRVRIELDQSIPRFSLKMTSMTAADTGMYYCARNAIRIYGVVALGEWFHYGMDVWGQGTAVT | ELTQPPSVSVSPGQTARITCSGAPLTSRFTYWYRQKPGQAPVLIISRSSQRSSGWSGRFSASWSGTTVTLTIRGVQADDEADYYCQSSDTSDSYKMFGGGTKLTVL | 14.796729 | 13.517266 | 233 | 214 | 126 | 106 | 126 | 106 | 51 | bg18 fab heavy chain | bg18 fab light chain | homo sapiens | homo sapiens | C | protein | v703-0537_t278m_l14 sosip | human immunodeficiency virus 1 | 22 | 10 | 1 | HL | train |
9msy_P_R | 9msy | g002-480-0546 fab in complex with v703-0537_t278m_l14 sosip and bg18 fab | no | viral protein/immune system | 2025-01-10 | 2025-05-28 | electron microscopy | 3.4 | N.A. | N.A. | 40373112 | 10.1126/science.adr8382 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | P | R | QVQLVQSGAELKKPGASVKVSCKASGYTFTDSYMHWVRQAPGQGLEWMGWINPNYGATNYAHKFQGRVTMTRDTSITTAYMELNRLRSDDTAVYYCARGNFLRVDYTWDFQHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGEGATLSCRTSQSLSSSSLAWYQQKPGLAPRLLIYGASIRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYEFFGAGTRVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVQSGAELKKPGASVKVSCKASGYTFTDSYMHWVRQAPGQGLEWMGWINPNYGATNYAHKFQGRVTMTRDTSITTAYMELNRLRSDDTAVYYCARGNFLRVDYTWDFQHWGQGTLVT | EIVLTQSPGTLSLSPGEGATLSCRTSQSLSSSSLAWYQQKPGLAPRLLIYGASIRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYEFFGAGTRVE | 13.972978 | 13.118531 | 226 | 211 | 119 | 102 | 119 | 102 | 42 | g002-480-0546 fab heavy chain | g002-480-0546 fab light chain | homo sapiens | homo sapiens | C | protein | v703-0537_t278m_l14 sosip | human immunodeficiency virus 1 | 58 | 15 | 0.56 | HL | train |
9mso_A_B | 9mso | crystal structure of mpxv a35r in complex with neutralizing antibody ev35-6 | no | immune system | 2025-01-10 | 2025-09-10 | x-ray diffraction | 3.18 | 0.251 | 0.24 | 40865529 | 10.1016/j.cell.2025.08.004 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV3 | A | B | QVQLQQWGAGLLKPSETLSLTCAVSGASFSGYYWTWIRQPPGKGLEWIGEIHHTGNTNYNPSLKSRVSISVDTSKNQFSLKLTSVTAADTAVYYCARVGGYYYGWGKKPHWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPATLSLSPGERATLSCRASQSVSSDLAWYQQRPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWGFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQQWGAGLLKPSETLSLTCAVSGASFSGYYWTWIRQPPGKGLEWIGEIHHTGNTNYNPSLKSRVSISVDTSKNQFSLKLTSVTAADTAVYYCARVGGYYYGWGKKPHWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | EIVLTQSPATLSLSPGERATLSCRASQSVSSDLAWYQQRPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWGFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 22.647764 | 22.444012 | 228 | 214 | 217 | 211 | 225 | 211 | 100 | ev35-6 heavy chain | ev35-6 light chain | homo sapiens | homo sapiens | E;F | protein;protein | protein opg161;protein opg161 | monkeypox virus;monkeypox virus | 33;39 | 13;15 | 0.87;0.83 | HL | train |
9mso_H_L | 9mso | crystal structure of mpxv a35r in complex with neutralizing antibody ev35-6 | no | immune system | 2025-01-10 | 2025-09-10 | x-ray diffraction | 3.18 | 0.251 | 0.24 | 40865529 | 10.1016/j.cell.2025.08.004 | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV3 | H | L | QVQLQQWGAGLLKPSETLSLTCAVSGASFSGYYWTWIRQPPGKGLEWIGEIHHTGNTNYNPSLKSRVSISVDTSKNQFSLKLTSVTAADTAVYYCARVGGYYYGWGKKPHWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPATLSLSPGERATLSCRASQSVSSDLAWYQQRPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWGFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQQWGAGLLKPSETLSLTCAVSGASFSGYYWTWIRQPPGKGLEWIGEIHHTGNTNYNPSLKSRVSISVDTSKNQFSLKLTSVTAADTAVYYCARVGGYYYGWGKKPHWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | EIVLTQSPATLSLSPGERATLSCRASQSVSSDLAWYQQRPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSNWGFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 23.326942 | 21.697113 | 228 | 214 | 221 | 211 | 227 | 211 | 102 | ev35-6 heavy chain | ev35-6 light chain | homo sapiens | homo sapiens | G;I | protein;protein | protein opg161;protein opg161 | monkeypox virus;monkeypox virus | 35;38 | 14;15 | 0.88;0.83 | HL | train |
9mtf_H_L | 9mtf | structure of porcine fab 14-1 in complex with influenza h1n1 a/solomon island/3/2006 hemagglutinin | no | viral protein/immune system | 2025-01-11 | 2025-09-24 | electron microscopy | 2.61 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV8 | H | L | EEKLVESGGGLVQPGGSLRLGCVGSGFTFSSAYINWVRQAPGKGLEWLAAIRTSGGGTYYADSVKGRFTISRDDSQNTAYLQMNSLRTEDTARYYCAAGAMTMVVASFFQYYAMDLWGPGVEVVVSS | QTVIQEPAMSVSPGGTVTLTCAFSSGSVTSGDYPSWFQQTPGQPPRLLIYRTNNRPTGVPSRFSGAISGNKAALTITGAQANDEADYYCTLYTSSLNNIFGGGTHLTVLGQP | EEKLVESGGGLVQPGGSLRLGCVGSGFTFSSAYINWVRQAPGKGLEWLAAIRTSGGGTYYADSVKGRFTISRDDSQNTAYLQMNSLRTEDTARYYCAAGAMTMVVASFFQYYAMDLWGPGVEVVVSS | QTVIQEPAMSVSPGGTVTLTCAFSSGSVTSGDYPSWFQQTPGQPPRLLIYRTNNRPTGVPSRFSGAISGNKAALTITGAQANDEADYYCTLYTSSLNNIFGGGTHLTV | 14.53634 | 12.952366 | 127 | 112 | 127 | 108 | 127 | 108 | 51 | heavy chain of fab from porcine antibody 14-1 | light chain of fab from porcine antibody 14-1 | sus scrofa | sus scrofa | B | protein | hemagglutinin (ha2 polypeptide) from influenza h1n1 a/solomon island/3/2006 | influenza a virus | 49 | 20 | 0.83 | HL | train |
9mtf_I_J | 9mtf | structure of porcine fab 14-1 in complex with influenza h1n1 a/solomon island/3/2006 hemagglutinin | no | viral protein/immune system | 2025-01-11 | 2025-09-24 | electron microscopy | 2.61 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV8 | I | J | EEKLVESGGGLVQPGGSLRLGCVGSGFTFSSAYINWVRQAPGKGLEWLAAIRTSGGGTYYADSVKGRFTISRDDSQNTAYLQMNSLRTEDTARYYCAAGAMTMVVASFFQYYAMDLWGPGVEVVVSS | QTVIQEPAMSVSPGGTVTLTCAFSSGSVTSGDYPSWFQQTPGQPPRLLIYRTNNRPTGVPSRFSGAISGNKAALTITGAQANDEADYYCTLYTSSLNNIFGGGTHLTVLGQP | EEKLVESGGGLVQPGGSLRLGCVGSGFTFSSAYINWVRQAPGKGLEWLAAIRTSGGGTYYADSVKGRFTISRDDSQNTAYLQMNSLRTEDTARYYCAAGAMTMVVASFFQYYAMDLWGPGVEVVVSS | QTVIQEPAMSVSPGGTVTLTCAFSSGSVTSGDYPSWFQQTPGQPPRLLIYRTNNRPTGVPSRFSGAISGNKAALTITGAQANDEADYYCTLYTSSLNNIFGGGTHLTV | 14.552377 | 12.989882 | 127 | 112 | 127 | 108 | 127 | 108 | 51 | heavy chain of fab from porcine antibody 14-1 | light chain of fab from porcine antibody 14-1 | sus scrofa | sus scrofa | D | protein | hemagglutinin (ha2 polypeptide) from influenza h1n1 a/solomon island/3/2006 | influenza a virus | 49 | 20 | 0.83 | HL | train |
9mtf_M_N | 9mtf | structure of porcine fab 14-1 in complex with influenza h1n1 a/solomon island/3/2006 hemagglutinin | no | viral protein/immune system | 2025-01-11 | 2025-09-24 | electron microscopy | 2.61 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV8 | M | N | EEKLVESGGGLVQPGGSLRLGCVGSGFTFSSAYINWVRQAPGKGLEWLAAIRTSGGGTYYADSVKGRFTISRDDSQNTAYLQMNSLRTEDTARYYCAAGAMTMVVASFFQYYAMDLWGPGVEVVVSS | QTVIQEPAMSVSPGGTVTLTCAFSSGSVTSGDYPSWFQQTPGQPPRLLIYRTNNRPTGVPSRFSGAISGNKAALTITGAQANDEADYYCTLYTSSLNNIFGGGTHLTVLGQP | EEKLVESGGGLVQPGGSLRLGCVGSGFTFSSAYINWVRQAPGKGLEWLAAIRTSGGGTYYADSVKGRFTISRDDSQNTAYLQMNSLRTEDTARYYCAAGAMTMVVASFFQYYAMDLWGPGVEVVVSS | QTVIQEPAMSVSPGGTVTLTCAFSSGSVTSGDYPSWFQQTPGQPPRLLIYRTNNRPTGVPSRFSGAISGNKAALTITGAQANDEADYYCTLYTSSLNNIFGGGTHLTV | 14.536138 | 12.948815 | 127 | 112 | 127 | 108 | 127 | 108 | 48 | heavy chain of fab from porcine antibody 14-1 | light chain of fab from porcine antibody 14-1 | sus scrofa | sus scrofa | F | protein | hemagglutinin (ha2 polypeptide) from influenza h1n1 a/solomon island/3/2006 | influenza a virus | 47 | 19 | 0.83 | HL | train |
9mtg_I_J | 9mtg | structure of porcine fab 14-2 in complex with influenza h1n1 a/hawaii/70/2019 hemagglutinin | no | viral protein/immune system | 2025-01-11 | 2025-09-24 | electron microscopy | 2.52 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | I | J | EEKLVESGGGLVQPGGSLRLSCVGSGITFSSYVVSWVRQAPGKGLEWLAGVNTVSSISRTDYADSVKGRFTISRDDSQNTAYLQMNALRTEDTARYYCARSLYFYSMRMDLWGPGVEVVVSS | AIQLTQSPASLAASLGDTVSITCRASQSISSSLAWYQQQPGKAPKLLIYAASSLQSGVPSRFKGSGSGTDFTLTISGLQAEDVASYYCLQQNSAPYGFGAGTKLELK | EKLVESGGGLVQPGGSLRLSCVGSGITFSSYVVSWVRQAPGKGLEWLAGVNTVSSISRTDYADSVKGRFTISRDDSQNTAYLQMNALRTEDTARYYCARSLYFYSMRMDLWGPGV | QLTQSPASLAASLGDTVSITCRASQSISSSLAWYQQQPGKAPKLLIYAASSLQSGVPSRFKGSGSGTDFTLTISGLQAEDVASYYCLQQNSAPYGFGAGTKLE | 13.557591 | 12.748487 | 122 | 107 | 115 | 103 | 115 | 103 | 39 | heavy chain of fab from porcine antibody 14-2 | light chain of fab from porcine antibody 14-2 | sus scrofa | sus scrofa | A;B | protein;protein | hemagglutinin;hemagglutinin | influenza a virus;influenza a virus | 22;33 | 8;14 | 1.0;0.82 | HL | train |
9mtg_M_N | 9mtg | structure of porcine fab 14-2 in complex with influenza h1n1 a/hawaii/70/2019 hemagglutinin | no | viral protein/immune system | 2025-01-11 | 2025-09-24 | electron microscopy | 2.52 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | M | N | EEKLVESGGGLVQPGGSLRLSCVGSGITFSSYVVSWVRQAPGKGLEWLAGVNTVSSISRTDYADSVKGRFTISRDDSQNTAYLQMNALRTEDTARYYCARSLYFYSMRMDLWGPGVEVVVSS | AIQLTQSPASLAASLGDTVSITCRASQSISSSLAWYQQQPGKAPKLLIYAASSLQSGVPSRFKGSGSGTDFTLTISGLQAEDVASYYCLQQNSAPYGFGAGTKLELK | EKLVESGGGLVQPGGSLRLSCVGSGITFSSYVVSWVRQAPGKGLEWLAGVNTVSSISRTDYADSVKGRFTISRDDSQNTAYLQMNALRTEDTARYYCARSLYFYSMRMDLWGPGV | QLTQSPASLAASLGDTVSITCRASQSISSSLAWYQQQPGKAPKLLIYAASSLQSGVPSRFKGSGSGTDFTLTISGLQAEDVASYYCLQQNSAPYGFGAGTKLEL | 13.566855 | 12.82032 | 122 | 107 | 115 | 104 | 115 | 104 | 41 | heavy chain of fab from porcine antibody 14-2 | light chain of fab from porcine antibody 14-2 | sus scrofa | sus scrofa | C;D | protein;protein | hemagglutinin;hemagglutinin | influenza a virus;influenza a virus | 24;33 | 10;12 | 1.0;0.75 | HL | train |
9mtg_H_L | 9mtg | structure of porcine fab 14-2 in complex with influenza h1n1 a/hawaii/70/2019 hemagglutinin | no | viral protein/immune system | 2025-01-11 | 2025-09-24 | electron microscopy | 2.52 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | EEKLVESGGGLVQPGGSLRLSCVGSGITFSSYVVSWVRQAPGKGLEWLAGVNTVSSISRTDYADSVKGRFTISRDDSQNTAYLQMNALRTEDTARYYCARSLYFYSMRMDLWGPGVEVVVSS | AIQLTQSPASLAASLGDTVSITCRASQSISSSLAWYQQQPGKAPKLLIYAASSLQSGVPSRFKGSGSGTDFTLTISGLQAEDVASYYCLQQNSAPYGFGAGTKLELK | EKLVESGGGLVQPGGSLRLSCVGSGITFSSYVVSWVRQAPGKGLEWLAGVNTVSSISRTDYADSVKGRFTISRDDSQNTAYLQMNALRTEDTARYYCARSLYFYSMRMDLWGPGV | QLTQSPASLAASLGDTVSITCRASQSISSSLAWYQQQPGKAPKLLIYAASSLQSGVPSRFKGSGSGTDFTLTISGLQAEDVASYYCLQQNSAPYGFGAGTKLEL | 13.58801 | 12.837604 | 122 | 107 | 115 | 104 | 115 | 104 | 41 | heavy chain of fab from porcine antibody 14-2 | light chain of fab from porcine antibody 14-2 | sus scrofa | sus scrofa | E;F | protein;protein | hemagglutinin;hemagglutinin | influenza a virus;influenza a virus | 26;33 | 10;12 | 0.91;0.75 | HL | train |
9mth_H_L | 9mth | structure of porcine fab 14-8 in complex with influenza h1n1 a/solomon island/3/2006 hemagglutinin | no | viral protein/immune system | 2025-01-11 | 2025-09-24 | electron microscopy | 2.5 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV8 | H | L | EEKLVESGGGLVQSGGSLRLSCVGSGFDLSDNAFTWVRQAPGKGLEWVATISTNGGSTYYADSVTGRFTISKDNSRNTIYLQMNSLRTEDTAHYYCARYKVCHRYGLSCYYYGMDRWGPGVEVVVSSASTKGPS | QTVIQEPAMSVSPGGTVTLTCAFSSGSVTTSNYPGWYQQTPGQPPRQVIYSTNSRPTVVPSRFSGAISGNKATLTITGAQAEDEADYFCGLYKNSANIPFGGGTHLTVLGQPKAAP | EKLVESGGGLVQSGGSLRLSCVGSGFDLSDNAFTWVRQAPGKGLEWVATISTNGGSTYYADSVTGRFTISKDNSRNTIYLQMNSLRTEDTAHYYCARYKVCHRYGLSCYYYGMDRWGPGVEVVVSSA | TVIQEPAMSVSPGGTVTLTCAFSSGSVTTSNYPGWYQQTPGQPPRQVIYSTNSRPTVVPSRFSGAISGNKATLTITGAQAEDEADYFCGLYKNSANIPFGGGTHLTVLGQPKA | 14.494794 | 13.756088 | 134 | 116 | 127 | 113 | 127 | 113 | 41 | heavy chain of fab from porcine antibody 14-8 | light chain of fab from porcine antibody 14-8 | sus scrofa | sus scrofa | B | protein | hemagglutinin (ha2 polypeptide) from influenza h1n1 a/solomon island/3/2006 | influenza a virus | 47 | 16 | 0.7 | HL | train |
9mth_I_J | 9mth | structure of porcine fab 14-8 in complex with influenza h1n1 a/solomon island/3/2006 hemagglutinin | no | viral protein/immune system | 2025-01-11 | 2025-09-24 | electron microscopy | 2.5 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV8 | I | J | EEKLVESGGGLVQSGGSLRLSCVGSGFDLSDNAFTWVRQAPGKGLEWVATISTNGGSTYYADSVTGRFTISKDNSRNTIYLQMNSLRTEDTAHYYCARYKVCHRYGLSCYYYGMDRWGPGVEVVVSSASTKGPS | QTVIQEPAMSVSPGGTVTLTCAFSSGSVTTSNYPGWYQQTPGQPPRQVIYSTNSRPTVVPSRFSGAISGNKATLTITGAQAEDEADYFCGLYKNSANIPFGGGTHLTVLGQPKAAP | EKLVESGGGLVQSGGSLRLSCVGSGFDLSDNAFTWVRQAPGKGLEWVATISTNGGSTYYADSVTGRFTISKDNSRNTIYLQMNSLRTEDTAHYYCARYKVCHRYGLSCYYYGMDRWGPGVEVVVSSAS | TVIQEPAMSVSPGGTVTLTCAFSSGSVTTSNYPGWYQQTPGQPPRQVIYSTNSRPTVVPSRFSGAISGNKATLTITGAQAEDEADYFCGLYKNSANIPFGGGTHLTVLGQPKA | 14.602534 | 13.749539 | 134 | 116 | 128 | 113 | 128 | 113 | 40 | heavy chain of fab from porcine antibody 14-8 | light chain of fab from porcine antibody 14-8 | sus scrofa | sus scrofa | D | protein | hemagglutinin (ha2 polypeptide) from influenza h1n1 a/solomon island/3/2006 | influenza a virus | 50 | 17 | 0.71 | HL | train |
9mth_M_N | 9mth | structure of porcine fab 14-8 in complex with influenza h1n1 a/solomon island/3/2006 hemagglutinin | no | viral protein/immune system | 2025-01-11 | 2025-09-24 | electron microscopy | 2.5 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV8 | M | N | EEKLVESGGGLVQSGGSLRLSCVGSGFDLSDNAFTWVRQAPGKGLEWVATISTNGGSTYYADSVTGRFTISKDNSRNTIYLQMNSLRTEDTAHYYCARYKVCHRYGLSCYYYGMDRWGPGVEVVVSSASTKGPS | QTVIQEPAMSVSPGGTVTLTCAFSSGSVTTSNYPGWYQQTPGQPPRQVIYSTNSRPTVVPSRFSGAISGNKATLTITGAQAEDEADYFCGLYKNSANIPFGGGTHLTVLGQPKAAP | EKLVESGGGLVQSGGSLRLSCVGSGFDLSDNAFTWVRQAPGKGLEWVATISTNGGSTYYADSVTGRFTISKDNSRNTIYLQMNSLRTEDTAHYYCARYKVCHRYGLSCYYYGMDRWGPGVEVVVSSA | TVIQEPAMSVSPGGTVTLTCAFSSGSVTTSNYPGWYQQTPGQPPRQVIYSTNSRPTVVPSRFSGAISGNKATLTITGAQAEDEADYFCGLYKNSANIPFGGGTHLTVL | 14.478037 | 13.04669 | 134 | 116 | 127 | 108 | 127 | 108 | 42 | heavy chain of fab from porcine antibody 14-8 | light chain of fab from porcine antibody 14-8 | sus scrofa | sus scrofa | F | protein | hemagglutinin (ha2 polypeptide) from influenza h1n1 a/solomon island/3/2006 | influenza a virus | 44 | 16 | 0.73 | HL | train |
9mti_H_L | 9mti | structure of porcine fab 15-1 in complex with influenza h3n8 a/mallard/alberta/362/2017 hemagglutinin | no | viral protein/immune system | 2025-01-11 | 2025-09-24 | electron microscopy | 2.98 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | N.A. | IGKV2 | H | L | EEKLVESGGGLVQPGGSLRLSCVGSGFDLSDYAFSWVRQAPRKGLEWLAAIDSVSYRRSTYYADSVKGRFTISSDYSQNTLYLQMNSLRTEDTARYYCARGAFPNLWGPGVEVVVS | AIVLTQTPLSLSVSPGEPASISCRSSQSLRHTDGKDYLNWYLQKPGQSPQLLIYYATTRASGVPDRFTGSGSGTDFTLKISRVEAEDVGVYYCFQGLQSPPGFGAGTKLELK | YAFSWVRQAPRKGLEWLAAIDSVSYRRSTYYADSVKGRFTISSDYSQNTLYLQMNSLRTEDTARYYCARGAFPNLWGPGVEV | VLTQTPLSLSVSPGEPASISCRSSQSLRHTDGKDYLNWYLQKPGQSPQLLIYYATTRASGVPDRFTGSGSGTDFTLKISRVEAEDVGVYYCFQGLQSPPGFGAGTKL | 12.871597 | 12.614041 | 116 | 112 | 64 | 93 | 82 | 107 | 37 | heavy chain of fab from porcine antibody 15-1 | light chain of fab from porcine antibody 15-1 | sus scrofa | sus scrofa | A | protein | hemagglutinin | influenza a virus | 53 | 23 | 0.72 | HL | train |
9mti_I_J | 9mti | structure of porcine fab 15-1 in complex with influenza h3n8 a/mallard/alberta/362/2017 hemagglutinin | no | viral protein/immune system | 2025-01-11 | 2025-09-24 | electron microscopy | 2.98 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | N.A. | IGKV2 | I | J | EEKLVESGGGLVQPGGSLRLSCVGSGFDLSDYAFSWVRQAPRKGLEWLAAIDSVSYRRSTYYADSVKGRFTISSDYSQNTLYLQMNSLRTEDTARYYCARGAFPNLWGPGVEVVVS | AIVLTQTPLSLSVSPGEPASISCRSSQSLRHTDGKDYLNWYLQKPGQSPQLLIYYATTRASGVPDRFTGSGSGTDFTLKISRVEAEDVGVYYCFQGLQSPPGFGAGTKLELK | LRLSCVGSGFDLSDYAFSWVRQAPRKGLEWLAAIDSVSYRRSTYYADSVKGRFTISSDYSQNTLYLQMNSLRTEDTARYYCARGAFPNLWGPGVEV | VLTQTPLSLSVSPGEPASISCRSSQSLRHTDGKDYLNWYLQKPGQSPQLLIYYATTRASGVPDRFTGSGSGTDFTLKISRVEAEDVGVYYCFQGLQSPPGFGAGTKL | 13.190315 | 12.581847 | 116 | 112 | 90 | 93 | 96 | 107 | 38 | heavy chain of fab from porcine antibody 15-1 | light chain of fab from porcine antibody 15-1 | sus scrofa | sus scrofa | B | protein | hemagglutinin | influenza a virus | 48 | 22 | 0.73 | HL | train |
9mti_M_N | 9mti | structure of porcine fab 15-1 in complex with influenza h3n8 a/mallard/alberta/362/2017 hemagglutinin | no | viral protein/immune system | 2025-01-11 | 2025-09-24 | electron microscopy | 2.98 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | N.A. | IGKV2 | M | N | EEKLVESGGGLVQPGGSLRLSCVGSGFDLSDYAFSWVRQAPRKGLEWLAAIDSVSYRRSTYYADSVKGRFTISSDYSQNTLYLQMNSLRTEDTARYYCARGAFPNLWGPGVEVVVS | AIVLTQTPLSLSVSPGEPASISCRSSQSLRHTDGKDYLNWYLQKPGQSPQLLIYYATTRASGVPDRFTGSGSGTDFTLKISRVEAEDVGVYYCFQGLQSPPGFGAGTKLELK | YAFSWVRQAPRKGLEWLAAIDSVSYRRSTYYADSVKGRFTISSDYSQNTLYLQMNSLRTEDTARYYCARGAFPNLWGPGVEV | VLTQTPLSLSVSPGEPASISCRSSQSLRHTDGKDYLNWYLQKPGQSPQLLIYYATTRASGVPDRFTGSGSGTDFTLKISRVEAEDVGVYYCFQGLQSPPGFGAGTKL | 12.557278 | 12.490916 | 116 | 112 | 56 | 92 | 82 | 107 | 39 | heavy chain of fab from porcine antibody 15-1 | light chain of fab from porcine antibody 15-1 | sus scrofa | sus scrofa | C | protein | hemagglutinin | influenza a virus | 49 | 21 | 0.78 | HL | train |
9mtk_H_L | 9mtk | structure of porcine fab 24-1g17 in complex with influenza h1n1 a/hawaii/70/2019 hemagglutinin | no | viral protein/immune system | 2025-01-11 | 2025-09-24 | electron microscopy | 2.54 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV8 | H | L | EEKLVESGGGLVQPGGSLRLSCVGSGFGFSYTYINWVRQAPGKGLEWLAAISSSGGDTYYAVSVKGRFTVSRDNSQNTAYLQMNSLRTEDTARYYCATHAVRLAVASFFVDPMDLWGPGVEVVVSSASTKGPS | QTVIQEPAMSVSPGGTVTLTCAFSSGSVTTSNYPSWFQQTPGQPPRLLIYKTNGRPTGVPSRVSGAISGNKAALTITGAQAEDEADYFCALYKSIANIRFGAGTPLTVLGQPKAAP | KLVESGGGLVQPGGSLRLSCVGSGFGFSYTYINWVRQAPGKGLEWLAAISSSGGDTYYAVSVKGRFTVSRDNSQNTAYLQMNSLRTEDTARYYCATHAVRLAVASFFVDPMDLWGPGVEV | TVIQEPAMSVSPGGTVTLTCAFSSGSVTTSNYPSWFQQTPGQPPRLLIYKTNGRPTGVPSRVSGAISGNKAALTITGAQAEDEADYFCALYKSIANIRFGAGTPLTVLGQP | 13.71662 | 13.591935 | 133 | 116 | 120 | 111 | 120 | 111 | 39 | heavy chain of fab from porcine antibody 24-1g17 | light chain of fab from porcine antibody 24-1g17 | sus scrofa | sus scrofa | A;B | protein;protein | hemagglutinin;hemagglutinin | influenza a virus;influenza a virus | 26;35 | 12;14 | 0.92;0.93 | HL | train |
9mtk_I_J | 9mtk | structure of porcine fab 24-1g17 in complex with influenza h1n1 a/hawaii/70/2019 hemagglutinin | no | viral protein/immune system | 2025-01-11 | 2025-09-24 | electron microscopy | 2.54 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV8 | I | J | EEKLVESGGGLVQPGGSLRLSCVGSGFGFSYTYINWVRQAPGKGLEWLAAISSSGGDTYYAVSVKGRFTVSRDNSQNTAYLQMNSLRTEDTARYYCATHAVRLAVASFFVDPMDLWGPGVEVVVSSASTKGPS | QTVIQEPAMSVSPGGTVTLTCAFSSGSVTTSNYPSWFQQTPGQPPRLLIYKTNGRPTGVPSRVSGAISGNKAALTITGAQAEDEADYFCALYKSIANIRFGAGTPLTVLGQPKAAP | KLVESGGGLVQPGGSLRLSCVGSGFGFSYTYINWVRQAPGKGLEWLAAISSSGGDTYYAVSVKGRFTVSRDNSQNTAYLQMNSLRTEDTARYYCATHAVRLAVASFFVDPMDLWGPGVEV | TVIQEPAMSVSPGGTVTLTCAFSSGSVTTSNYPSWFQQTPGQPPRLLIYKTNGRPTGVPSRVSGAISGNKAALTITGAQAEDEADYFCALYKSIANIRFGAGTPLTVLGQP | 13.738344 | 13.590197 | 133 | 116 | 120 | 111 | 120 | 111 | 39 | heavy chain of fab from porcine antibody 24-1g17 | light chain of fab from porcine antibody 24-1g17 | sus scrofa | sus scrofa | C;D | protein;protein | hemagglutinin;hemagglutinin | influenza a virus;influenza a virus | 29;33 | 12;13 | 0.86;0.93 | HL | train |
9mtk_M_N | 9mtk | structure of porcine fab 24-1g17 in complex with influenza h1n1 a/hawaii/70/2019 hemagglutinin | no | viral protein/immune system | 2025-01-11 | 2025-09-24 | electron microscopy | 2.54 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV8 | M | N | EEKLVESGGGLVQPGGSLRLSCVGSGFGFSYTYINWVRQAPGKGLEWLAAISSSGGDTYYAVSVKGRFTVSRDNSQNTAYLQMNSLRTEDTARYYCATHAVRLAVASFFVDPMDLWGPGVEVVVSSASTKGPS | QTVIQEPAMSVSPGGTVTLTCAFSSGSVTTSNYPSWFQQTPGQPPRLLIYKTNGRPTGVPSRVSGAISGNKAALTITGAQAEDEADYFCALYKSIANIRFGAGTPLTVLGQPKAAP | KLVESGGGLVQPGGSLRLSCVGSGFGFSYTYINWVRQAPGKGLEWLAAISSSGGDTYYAVSVKGRFTVSRDNSQNTAYLQMNSLRTEDTARYYCATHAVRLAVASFFVDPMDLWGPGVEV | TVIQEPAMSVSPGGTVTLTCAFSSGSVTTSNYPSWFQQTPGQPPRLLIYKTNGRPTGVPSRVSGAISGNKAALTITGAQAEDEADYFCALYKSIANIRFGAGTPLTVLGQP | 13.744858 | 13.57156 | 133 | 116 | 120 | 111 | 120 | 111 | 38 | heavy chain of fab from porcine antibody 24-1g17 | light chain of fab from porcine antibody 24-1g17 | sus scrofa | sus scrofa | E;F | protein;protein | hemagglutinin;hemagglutinin | influenza a virus;influenza a virus | 24;35 | 12;14 | 0.92;0.93 | HL | train |
9lh2_B | 9lh2 | crystal structure of sars-cov-2 spike receptor-binding domain (delta) in complex with ph-dependent nanobody mnb-11. | yes | antiviral protein | 2025-01-11 | 2026-01-14 | x-ray diffraction | 2.3 | 0.236 | 0.209 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | B | N.A. | QVQLVESGGGLVQPGGSLRLSCAASGFTFNRYAMSWVRQAPGKGREWVSGIYSDGSETYYTESVKGRFTISRDNAKNMLYLQMNSLKPEDTALYYCAKDHHAHEDHFNSGFDRKYDYWGQGTQVTVSSHHHHHH | N.A. | QVQLVESGGGLVQPGGSLRLSCAASGFTFNRYAMSWVRQAPGKGREWVSGIYSDGSETYYTESVKGRFTISRDNAKNMLYLQMNSLKPEDTALYYCAKDHHAHEDHFNSGFDRKYDYWGQGTQVTVSSHHHH | N.A. | 14.539331 | 0 | 134 | 0 | 132 | 0 | 132 | 0 | 0 | mnb-11 | N.A. | vicugna pacos | N.A. | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 31 | 16 | 1 | H_only | train |
9lh2_D | 9lh2 | crystal structure of sars-cov-2 spike receptor-binding domain (delta) in complex with ph-dependent nanobody mnb-11. | yes | antiviral protein | 2025-01-11 | 2026-01-14 | x-ray diffraction | 2.3 | 0.236 | 0.209 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | QVQLVESGGGLVQPGGSLRLSCAASGFTFNRYAMSWVRQAPGKGREWVSGIYSDGSETYYTESVKGRFTISRDNAKNMLYLQMNSLKPEDTALYYCAKDHHAHEDHFNSGFDRKYDYWGQGTQVTVSSHHHHHH | N.A. | QVQLVESGGGLVQPGGSLRLSCAASGFTFNRYAMSWVRQAPGKGREWVSGIYSDGSETYYTESVKGRFTISRDNAKNMLYLQMNSLKPEDTALYYCAKDHHAHEDHFNSGFDRKYDYWGQGTQVTVSS | N.A. | 13.873219 | 0 | 134 | 0 | 128 | 0 | 128 | 0 | 0 | mnb-11 | N.A. | vicugna pacos | N.A. | C | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 30 | 14 | 1 | H_only | train |
9mtx_A | 9mtx | cryoem structure of extracellular domain of human her2 complexed with nano-bodies 29e09 | no | transferase | 2025-01-12 | 2025-11-19 | electron microscopy | 3.06 | N.A. | N.A. | 41504346 | 10.1158/1535-7163.MCT-25-0654 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | A | N.A. | EVQLVESGGGVVQPGGSLRLSCVASRIPASIRTMAWYRQTPGNQRDWLATIGSSGTPAYADSVKGRFTVSRDNAKNTVYLQMNSLRPEDTALYYCRDVNGDYWGQGTLVTVSSAAAHHHHHH | N.A. | QLVESGGGVVQPGGSLRLSCVASRIPASIRTMAWYRQTPGNQRDWLATIGSSGTPAYADSVKGRFTVSRDNAKNTVYLQMNSLRPEDTALYYCRDVNGDYWGQGTLVTVS | N.A. | 13.198597 | 0 | 122 | 0 | 110 | 0 | 110 | 0 | 0 | nanobody vhh 29e09 | N.A. | lama glama | N.A. | B | protein | receptor protein-tyrosine kinase | homo sapiens | 54 | 11 | 0.42 | H_only | train |
9hzj_A | 9hzj | sdab1 in complex with pfcsp a-tsr domain | no | immune system | 2025-01-13 | 2025-04-23 | x-ray diffraction | 2.06 | 0.242 | 0.195 | 40293231 | 10.1128/iai.00081-25 | 0 | auth_asym_id | VH | IGHV3 | N.A. | A | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGRTFSSYSMGWFRLVPGKEREFVARISSSGGNTYYADSVRGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAADLLQFGRSSRAADYDYWGQGTQVTVSSAAAYPYDVPDYGSHHHHHH | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGRTFSSYSMGWFRLVPGKEREFVARISSSGGNTYYADSVRGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAADLLQFGRSSRAADYDYWGQGTQVTVSS | N.A. | 13.531563 | 0 | 144 | 0 | 125 | 0 | 125 | 0 | 0 | sdab1 | N.A. | lama glama | N.A. | B | protein | circumsporozoite protein | plasmodium falciparum nf54 | 31 | 15 | 0.94 | H_only | train |
9hzk_A | 9hzk | sdab9 in complex with pfcsp atsr domain | no | immune system | 2025-01-13 | 2025-04-23 | x-ray diffraction | 2.07 | 0.226 | 0.184 | 40293231 | 10.1128/iai.00081-25 | 0 | auth_asym_id | VH | IGHV3 | N.A. | A | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGRTFSSYSMGWFRQVPGKEREFVARITSSGGNTDYADSAKGRFTISRDNAKNTVYLQMSTLKPEDTAVYYCAADLWQYGRNSRAADYDYWGQGTQVTVSSAAAYPYDVPDYGSHHHHHH | N.A. | QVQLQESGGGLVQAGGSLRLSCAASGRTFSSYSMGWFRQVPGKEREFVARITSSGGNTDYADSAKGRFTISRDNAKNTVYLQMSTLKPEDTAVYYCAADLWQYGRNSRAADYDYWGQGTQVTVSS | N.A. | 13.610364 | 0 | 144 | 0 | 125 | 0 | 125 | 0 | 0 | sdab9 | N.A. | lama glama | N.A. | B | protein | circumsporozoite protein | plasmodium falciparum nf54 | 31 | 15 | 1 | H_only | train |
9ljj_M | 9ljj | cryo-em structure of a nanobody bound heliorhodopsin | no | membrane protein | 2025-01-15 | 2025-02-12 | electron microscopy | 3.23 | N.A. | N.A. | 39889627 | 10.1016/j.bbrc.2025.151398 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | M | N.A. | MVQLVESGGGLVQAGGSLRLSCAASGMAFSISRMEWHRQAPGNERELVARITGGGRTTYGDSVKGRFTISRDNAKSMVYLQMNSLKPEDTAVYYCNTGYFWGQGTQVTVSSAAALEHHHHHH | N.A. | MVQLVESGGGLVQAGGSLRLSCAASGMAFSISRMEWHRQAPGNERELVARITGGGRTTYGDSVKGRFTISRDNAKSMVYLQMNSLKPEDTAVYYCNTGYFWGQGTQVTVSS | N.A. | 13.56896 | 0 | 122 | 0 | 111 | 0 | 111 | 0 | 0 | nanobody b4 | N.A. | vicugna pacos | N.A. | A;B | protein;protein | heliorhodopsin;heliorhodopsin | escherichia coli;escherichia coli | 18;22 | 7;8 | 0.7;0.73 | H_only | train |
9ljj_N | 9ljj | cryo-em structure of a nanobody bound heliorhodopsin | no | membrane protein | 2025-01-15 | 2025-02-12 | electron microscopy | 3.23 | N.A. | N.A. | 39889627 | 10.1016/j.bbrc.2025.151398 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MVQLVESGGGLVQAGGSLRLSCAASGMAFSISRMEWHRQAPGNERELVARITGGGRTTYGDSVKGRFTISRDNAKSMVYLQMNSLKPEDTAVYYCNTGYFWGQGTQVTVSSAAALEHHHHHH | N.A. | MVQLVESGGGLVQAGGSLRLSCAASGMAFSISRMEWHRQAPGNERELVARITGGGRTTYGDSVKGRFTISRDNAKSMVYLQMNSLKPEDTAVYYCNTGYFWGQGTQVTVSS | N.A. | 13.56852 | 0 | 122 | 0 | 111 | 0 | 111 | 0 | 0 | nanobody b4 | N.A. | vicugna pacos | N.A. | A;B | protein;protein | heliorhodopsin;heliorhodopsin | escherichia coli;escherichia coli | 23;20 | 8;7 | 0.73;0.64 | H_only | train |
9mvu_D | 9mvu | c6 herpes virus simplex neutralizing nanobody bound to hsv glycoprotein gb | yes | antiviral protein | 2025-01-16 | 2025-08-13 | electron microscopy | 2.2 | N.A. | N.A. | 40716063 | 10.1016/j.celrep.2025.116063 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGVTFGSNRMGWFRQAPGKGREFVATHSTYFNPARTNYADSVKGRFTISRDNAGNSVYLQMNSLRAEDTAVYYCLFDRRLGTVVTGPEGYWGQGTQVTVSSHHHHHH | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGVTFGSNRMGWFRQAPGKGREFVATHSTYFNPARTNYADSVKGRFTISRDNAGNSVYLQMNSLRAEDTAVYYCLFDRRLGTVVTGPEGYWGQGTQVTVSS | N.A. | 13.680161 | 0 | 131 | 0 | 125 | 0 | 125 | 0 | 0 | c6 neutralizing nanobody | N.A. | homo sapiens | N.A. | A | protein | envelope glycoprotein b | human herpesvirus 1 (strain 17) | 29 | 13 | 0.93 | H_only | train |
9mvu_F | 9mvu | c6 herpes virus simplex neutralizing nanobody bound to hsv glycoprotein gb | yes | antiviral protein | 2025-01-16 | 2025-08-13 | electron microscopy | 2.2 | N.A. | N.A. | 40716063 | 10.1016/j.celrep.2025.116063 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGVTFGSNRMGWFRQAPGKGREFVATHSTYFNPARTNYADSVKGRFTISRDNAGNSVYLQMNSLRAEDTAVYYCLFDRRLGTVVTGPEGYWGQGTQVTVSSHHHHHH | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGVTFGSNRMGWFRQAPGKGREFVATHSTYFNPARTNYADSVKGRFTISRDNAGNSVYLQMNSLRAEDTAVYYCLFDRRLGTVVTGPEGYWGQGTQVTVSS | N.A. | 13.687686 | 0 | 131 | 0 | 125 | 0 | 125 | 0 | 0 | c6 neutralizing nanobody | N.A. | homo sapiens | N.A. | B | protein | envelope glycoprotein b | human herpesvirus 1 (strain 17) | 33 | 15 | 0.88 | H_only | train |
9mvu_E | 9mvu | c6 herpes virus simplex neutralizing nanobody bound to hsv glycoprotein gb | yes | antiviral protein | 2025-01-16 | 2025-08-13 | electron microscopy | 2.2 | N.A. | N.A. | 40716063 | 10.1016/j.celrep.2025.116063 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | E | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGVTFGSNRMGWFRQAPGKGREFVATHSTYFNPARTNYADSVKGRFTISRDNAGNSVYLQMNSLRAEDTAVYYCLFDRRLGTVVTGPEGYWGQGTQVTVSSHHHHHH | N.A. | EVQLVESGGGLVQPGGSLRLSCAASGVTFGSNRMGWFRQAPGKGREFVATHSTYFNPARTNYADSVKGRFTISRDNAGNSVYLQMNSLRAEDTAVYYCLFDRRLGTVVTGPEGYWGQGTQVTVSS | N.A. | 13.67551 | 0 | 131 | 0 | 125 | 0 | 125 | 0 | 0 | c6 neutralizing nanobody | N.A. | homo sapiens | N.A. | C | protein | envelope glycoprotein b | human herpesvirus 1 (strain 17) | 33 | 15 | 0.83 | H_only | train |
9mw5_D | 9mw5 | d1 herpes virus simplex neutralizing nanobody bound to hsv glycoprotein gb | no | antiviral protein | 2025-01-16 | 2025-08-13 | electron microscopy | 2.1 | N.A. | N.A. | 40716063 | 10.1016/j.celrep.2025.116063 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | EVQLLESGGGLVQPGGSLRLSCAASGRGFSMLNVGWFRQAPGKGREFVATISWTGERTYYGDSVKGRFTISRDNSKNTAYLQMNSLRAEDTAVYYCAAVGPKTWDYGLASEYDYWGQGTQVTVSSHHHHHH | N.A. | EVQLLESGGGLVQPGGSLRLSCAASGRGFSMLNVGWFRQAPGKGREFVATISWTGERTYYGDSVKGRFTISRDNSKNTAYLQMNSLRAEDTAVYYCAAVGPKTWDYGLASEYDYWGQGTQVTVSS | N.A. | 13.753761 | 0 | 131 | 0 | 125 | 0 | 125 | 0 | 0 | d1 neutralizing nanobody | N.A. | homo sapiens | N.A. | A | protein | envelope glycoprotein b | homo sapiens | 47 | 18 | 0.9 | H_only | train |
9mw5_E | 9mw5 | d1 herpes virus simplex neutralizing nanobody bound to hsv glycoprotein gb | no | antiviral protein | 2025-01-16 | 2025-08-13 | electron microscopy | 2.1 | N.A. | N.A. | 40716063 | 10.1016/j.celrep.2025.116063 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | E | N.A. | EVQLLESGGGLVQPGGSLRLSCAASGRGFSMLNVGWFRQAPGKGREFVATISWTGERTYYGDSVKGRFTISRDNSKNTAYLQMNSLRAEDTAVYYCAAVGPKTWDYGLASEYDYWGQGTQVTVSSHHHHHH | N.A. | EVQLLESGGGLVQPGGSLRLSCAASGRGFSMLNVGWFRQAPGKGREFVATISWTGERTYYGDSVKGRFTISRDNSKNTAYLQMNSLRAEDTAVYYCAAVGPKTWDYGLASEYDYWGQGTQVTVSS | N.A. | 13.753772 | 0 | 131 | 0 | 125 | 0 | 125 | 0 | 0 | d1 neutralizing nanobody | N.A. | homo sapiens | N.A. | B | protein | envelope glycoprotein b | homo sapiens | 42 | 18 | 0.9 | H_only | train |
9mw5_F | 9mw5 | d1 herpes virus simplex neutralizing nanobody bound to hsv glycoprotein gb | no | antiviral protein | 2025-01-16 | 2025-08-13 | electron microscopy | 2.1 | N.A. | N.A. | 40716063 | 10.1016/j.celrep.2025.116063 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | EVQLLESGGGLVQPGGSLRLSCAASGRGFSMLNVGWFRQAPGKGREFVATISWTGERTYYGDSVKGRFTISRDNSKNTAYLQMNSLRAEDTAVYYCAAVGPKTWDYGLASEYDYWGQGTQVTVSSHHHHHH | N.A. | EVQLLESGGGLVQPGGSLRLSCAASGRGFSMLNVGWFRQAPGKGREFVATISWTGERTYYGDSVKGRFTISRDNSKNTAYLQMNSLRAEDTAVYYCAAVGPKTWDYGLASEYDYWGQGTQVTVSS | N.A. | 13.748583 | 0 | 131 | 0 | 125 | 0 | 125 | 0 | 0 | d1 neutralizing nanobody | N.A. | homo sapiens | N.A. | C | protein | envelope glycoprotein b | homo sapiens | 43 | 17 | 0.89 | H_only | train |
9i1q_K_G | 9i1q | her3 receptor in complex with the fab fragment of tk-hu a3 monoclonal antibody | no | antitumor protein | 2025-01-16 | 2025-10-15 | x-ray diffraction | 2.8 | 0.263 | 0.209 | 41133678 | 10.3390/antib14040084 | 0 | auth_asym_id | FabH:FabL | IGHV2 | IGKV2 | K | G | QVTLRESGPALVKPTQTLTLTCTFSGFSLSTYGMGVGWIRQPPGKALEWLANIWWNDDKYYSSSLKTRLTISKDTSKNQVVLTMTNMDPVDTATYYCVQIANPYWYFDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIVMTQTPLSLSVTPGQPASISCKSSQSLLHSYGNTYLEWYLQKPGQSPQLLIYRVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCFQGSHVPFTFGQGTKLEIKRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVTLRESGPALVKPTQTLTLTCTFSGFSLSTYGMGVGWIRQPPGKALEWLANIWWNDDKYYSSSLKTRLTISKDTSKNQVVLTMTNMDPVDTATYYCVQIANPYWYFDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIVMTQTPLSLSVTPGQPASISCKSSQSLLHSYGNTYLEWYLQKPGQSPQLLIYRVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCFQGSHVPFTFGQGTKLEIKRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 21.461618 | 23.80171 | 223 | 220 | 223 | 220 | 223 | 220 | 104 | heavy chain ha3-fab | light chain ha3-fab | homo sapiens | homo sapiens | D | protein | receptor tyrosine-protein kinase erbb-3 | homo sapiens | 46 | 20 | 0.83 | HL | train |
9i1q_I_F | 9i1q | her3 receptor in complex with the fab fragment of tk-hu a3 monoclonal antibody | no | antitumor protein | 2025-01-16 | 2025-10-15 | x-ray diffraction | 2.8 | 0.263 | 0.209 | 41133678 | 10.3390/antib14040084 | 0 | auth_asym_id | FabH:FabL | IGHV2 | IGKV2 | I | F | QVTLRESGPALVKPTQTLTLTCTFSGFSLSTYGMGVGWIRQPPGKALEWLANIWWNDDKYYSSSLKTRLTISKDTSKNQVVLTMTNMDPVDTATYYCVQIANPYWYFDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIVMTQTPLSLSVTPGQPASISCKSSQSLLHSYGNTYLEWYLQKPGQSPQLLIYRVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCFQGSHVPFTFGQGTKLEIKRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVTLRESGPALVKPTQTLTLTCTFSGFSLSTYGMGVGWIRQPPGKALEWLANIWWNDDKYYSSSLKTRLTISKDTSKNQVVLTMTNMDPVDTATYYCVQIANPYWYFDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIVMTQTPLSLSVTPGQPASISCKSSQSLLHSYGNTYLEWYLQKPGQSPQLLIYRVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCFQGSHVPFTFGQGTKLEIKRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 20.933033 | 23.942566 | 223 | 220 | 221 | 220 | 223 | 220 | 97 | heavy chain ha3-fab | light chain ha3-fab | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9i1q_J_E | 9i1q | her3 receptor in complex with the fab fragment of tk-hu a3 monoclonal antibody | no | antitumor protein | 2025-01-16 | 2025-10-15 | x-ray diffraction | 2.8 | 0.263 | 0.209 | 41133678 | 10.3390/antib14040084 | 0 | auth_asym_id | FabH:FabL | IGHV2 | IGKV2 | J | E | QVTLRESGPALVKPTQTLTLTCTFSGFSLSTYGMGVGWIRQPPGKALEWLANIWWNDDKYYSSSLKTRLTISKDTSKNQVVLTMTNMDPVDTATYYCVQIANPYWYFDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIVMTQTPLSLSVTPGQPASISCKSSQSLLHSYGNTYLEWYLQKPGQSPQLLIYRVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCFQGSHVPFTFGQGTKLEIKRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVTLRESGPALVKPTQTLTLTCTFSGFSLSTYGMGVGWIRQPPGKALEWLANIWWNDDKYYSSSLKTRLTISKDTSKNQVVLTMTNMDPVDTATYYCVQIANPYWYFDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIVMTQTPLSLSVTPGQPASISCKSSQSLLHSYGNTYLEWYLQKPGQSPQLLIYRVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCFQGSHVPFTFGQGTKLEIKRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 21.364632 | 23.83354 | 223 | 220 | 223 | 220 | 223 | 220 | 104 | heavy chain ha3-fab | light chain ha3-fab | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9i1q_L_H | 9i1q | her3 receptor in complex with the fab fragment of tk-hu a3 monoclonal antibody | no | antitumor protein | 2025-01-16 | 2025-10-15 | x-ray diffraction | 2.8 | 0.263 | 0.209 | 41133678 | 10.3390/antib14040084 | 0 | auth_asym_id | FabH:FabL | IGHV2 | IGKV2 | L | H | QVTLRESGPALVKPTQTLTLTCTFSGFSLSTYGMGVGWIRQPPGKALEWLANIWWNDDKYYSSSLKTRLTISKDTSKNQVVLTMTNMDPVDTATYYCVQIANPYWYFDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIVMTQTPLSLSVTPGQPASISCKSSQSLLHSYGNTYLEWYLQKPGQSPQLLIYRVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCFQGSHVPFTFGQGTKLEIKRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVTLRESGPALVKPTQTLTLTCTFSGFSLSTYGMGVGWIRQPPGKALEWLANIWWNDDKYYSSSLKTRLTISKDTSKNQVVLTMTNMDPVDTATYYCVQIANPYWYFDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVE | DIVMTQTPLSLSVTPGQPASISCKSSQSLLHSYGNTYLEWYLQKPGQSPQLLIYRVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCFQGSHVPFTFGQGTKLEIKRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 20.929672 | 23.764786 | 223 | 220 | 219 | 218 | 219 | 218 | 94 | heavy chain ha3-fab | light chain ha3-fab | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9lld_D_F | 9lld | post-fusion ectodomain of kshv gb in complex with 2c4 fab | no | viral protein/immune system | 2025-01-17 | 2025-03-05 | electron microscopy | 3.6 | N.A. | N.A. | 40285648 | 10.1002/advs.202502231 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | D | F | MGWSCIILFLVATATGVHSQVQLVQSGAELKTPGSSVKVSCKASGGTFSSNTVSWLRQAPGQGLEWMGRIIPIVDVTNYAQKFQGRVKITADKSTTTAYMQLSSLRSEDTAVYFCARDDAIDPFSYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKGSHHHHHHHH | MGWSCIILFLVATATGSWASSELSQPASVSGSPGQSITISCTGTSSDVGAYNFVSWYQQHPGKAPKLMIYDVTKWPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYASSNTYVFGTGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVQSGAELKTPGSSVKVSCKASGGTFSSNTVSWLRQAPGQGLEWMGRIIPIVDVTNYAQKFQGRVKITADKSTTTAYMQLSSLRSEDTAVYFCARDDAIDPFSYWGQGTLVTV | SELSQPASVSGSPGQSITISCTGTSSDVGAYNFVSWYQQHPGKAPKLMIYDVTKWPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYASSNTYVFGTGTKLTVL | 13.64646 | 13.531798 | 252 | 235 | 116 | 109 | 116 | 109 | 34 | 2c4 fab h chain | 2c4 fab l chain | homo sapiens | homo sapiens | A | protein | core gene ul27 family protein | human gammaherpesvirus 8 | 41 | 18 | 0.82 | HL | train |
9lld_E_G | 9lld | post-fusion ectodomain of kshv gb in complex with 2c4 fab | no | viral protein/immune system | 2025-01-17 | 2025-03-05 | electron microscopy | 3.6 | N.A. | N.A. | 40285648 | 10.1002/advs.202502231 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | E | G | MGWSCIILFLVATATGVHSQVQLVQSGAELKTPGSSVKVSCKASGGTFSSNTVSWLRQAPGQGLEWMGRIIPIVDVTNYAQKFQGRVKITADKSTTTAYMQLSSLRSEDTAVYFCARDDAIDPFSYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKGSHHHHHHHH | MGWSCIILFLVATATGSWASSELSQPASVSGSPGQSITISCTGTSSDVGAYNFVSWYQQHPGKAPKLMIYDVTKWPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYASSNTYVFGTGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVQSGAELKTPGSSVKVSCKASGGTFSSNTVSWLRQAPGQGLEWMGRIIPIVDVTNYAQKFQGRVKITADKSTTTAYMQLSSLRSEDTAVYFCARDDAIDPFSYWGQGTLVTV | SELSQPASVSGSPGQSITISCTGTSSDVGAYNFVSWYQQHPGKAPKLMIYDVTKWPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYASSNTYVFGTGTKLTVL | 13.66474 | 13.598397 | 252 | 235 | 116 | 109 | 116 | 109 | 37 | 2c4 fab h chain | 2c4 fab l chain | homo sapiens | homo sapiens | B | protein | core gene ul27 family protein | human gammaherpesvirus 8 | 42 | 19 | 0.79 | HL | train |
9lld_H_L | 9lld | post-fusion ectodomain of kshv gb in complex with 2c4 fab | no | viral protein/immune system | 2025-01-17 | 2025-03-05 | electron microscopy | 3.6 | N.A. | N.A. | 40285648 | 10.1002/advs.202502231 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | H | L | MGWSCIILFLVATATGVHSQVQLVQSGAELKTPGSSVKVSCKASGGTFSSNTVSWLRQAPGQGLEWMGRIIPIVDVTNYAQKFQGRVKITADKSTTTAYMQLSSLRSEDTAVYFCARDDAIDPFSYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKGSHHHHHHHH | MGWSCIILFLVATATGSWASSELSQPASVSGSPGQSITISCTGTSSDVGAYNFVSWYQQHPGKAPKLMIYDVTKWPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYASSNTYVFGTGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVQSGAELKTPGSSVKVSCKASGGTFSSNTVSWLRQAPGQGLEWMGRIIPIVDVTNYAQKFQGRVKITADKSTTTAYMQLSSLRSEDTAVYFCARDDAIDPFSYWGQGTLVTV | SELSQPASVSGSPGQSITISCTGTSSDVGAYNFVSWYQQHPGKAPKLMIYDVTKWPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYASSNTYVFGTGTKLTVL | 13.707035 | 13.493526 | 252 | 235 | 116 | 109 | 116 | 109 | 31 | 2c4 fab h chain | 2c4 fab l chain | homo sapiens | homo sapiens | C | protein | core gene ul27 family protein | human gammaherpesvirus 8 | 41 | 18 | 0.82 | HL | train |
9i20_B | 9i20 | cryo-em structure of human slc35b1 with adp | yes | transport protein | 2025-01-17 | 2025-05-21 | electron microscopy | 2.85 | N.A. | N.A. | 40399679 | 10.1038/s41586-025-09069-w | 0 | auth_asym_id | scFv | N.A. | N.A. | B | N.A. | DIVMTQSPASLTVSLGQSVTISCRASENVEYYGTSLMQWYQQKPGQPPKFLIYGASNIESGVPARFSGSGSGTDFSLNIHPVEEDDIAMYFCQQSRKVPYTFGSGTKLEIKGSGKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNA... | N.A. | DIVMTQSPASLTVSLGQSVTISCRASENVEYYGTSLMQWYQQKPGQPPKFLIYGASNIESGVPARFSGSGSGTDFSLNIHPVEEDDIAMYFCQQSRKVPYTFGSGTKLEIKGSGKIEEGKLVIWINGDKGYNGLAEVGKKFEKDTGIKVTVEHPDKLEEKFPQVAATGDGPDIIFWAHDRFGGYAQSGLLAEITPDKAFQDKLYPFTWDAVRYNGKLIAYPIAVEALSLIYNKDLLPNPPKTWEEIPALDKELKAKGKSALMFNLQEPYFTWPLIAADGGYAFKYENGKYDIKDVGVDNAGAKAGLTFLVDLIKNKHMNA... | N.A. | 18.32984 | 0 | 612 | 0 | 241 | 0 | 612 | 0 | 0 | maltodextrin-binding protein | N.A. | mus musculus | N.A. | A | protein | solute carrier family 35 member b1 | homo sapiens | 28 | 12 | 0.8 | H_only | train |
9mx1_B_C | 9mx1 | clostridioides difficile toxin a with mcdifa-248-25 fab | no | transferase,toxin/immune system | 2025-01-17 | 2025-07-09 | electron microscopy | 3.2 | N.A. | N.A. | 40844461 | 10.1128/iai.00139-25 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | B | C | EVKLVESGGGLVKPGGSLKLSCAASGFTFSNYAMSWVRQTPEKRLEWVAAINGNGAKIYYPDTVKDRFTISRDNAKNTLYLQMSSLRSEDTALYSCARQYGFYAGSPYYFDYWGLGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLESDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKI | DIVMTQSHKFMSTSIGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTYFTLSISNVQSEDLADYFCQQYSSYPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EVKLVESGGGLVKPGGSLKLSCAASGFTFSNYAMSWVRQTPEKRLEWVAAINGNGAKIYYPDTVKDRFTISRDNAKNTLYLQMSSLRSEDTALYSCARQYGFYAGSPYYFDYWGLGTTLTVSS | DIVMTQSHKFMSTSIGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSGSGTYFTLSISNVQSEDLADYFCQQYSSYPLTFGAGTKLELKR | 14.122829 | 13.566932 | 220 | 214 | 123 | 108 | 123 | 108 | 42 | mcdifa-248-25 fab heavy chain | mcdifa-248-25 fab light chain | mus musculus | mus musculus | A | protein | toxin a | clostridioides difficile | 51 | 21 | 0.81 | HL | train |
9lly_E_K | 9lly | cryo-em structure of rsv pre-f (sc9-10 ds-cav1, strain a2) in complex with fabs 1a2 and 1b6 | no | viral protein/immune system | 2025-01-17 | 2026-01-21 | electron microscopy | 3.18 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | E | K | QVQLQESGPGLERPSETVSLTCTVSGASINSGSYFWGWIRQPPGKGLEWVGSIHYSTTVYYNPSLKSRLTLSMDTSKNQFSLKVHAVTAADTAVYYCASHDWFGEPSPTYFDYWGRGTLLTVSS | DIQMTQSPSTLSATVGDTVTITCRASQSISRYLAWYQQKPGKAPKLLIFRASTLESDVPSRFSGSGSGTEFTLTITNLQPDDFATYYCQQFNTYSPITFGQGTKLEIR | QVQLQESGPGLERPSETVSLTCTVSGASINSGSYFWGWIRQPPGKGLEWVGSIHYSTTVYYNPSLKSRLTLSMDTSKNQFSLKVHAVTAADTAVYYCASHDWFGEPSPTYFDYWGRGTLLTVSS | DIQMTQSPSTLSATVGDTVTITCRASQSISRYLAWYQQKPGKAPKLLIFRASTLESDVPSRFSGSGSGTEFTLTITNLQPDDFATYYCQQFNTYSPITFGQGTKLEI | 14.008146 | 13.321494 | 124 | 108 | 124 | 107 | 124 | 107 | 47 | 1b6 heavy chain | 1b6 light chain | homo sapiens | homo sapiens | A;B | protein;protein | rsv pre-f protein;rsv pre-f protein | respiratory syncytial virus a2;respiratory syncytial virus a2 | 19;55 | 5;24 | 0.56;0.8 | HL | train |
9lly_H_L | 9lly | cryo-em structure of rsv pre-f (sc9-10 ds-cav1, strain a2) in complex with fabs 1a2 and 1b6 | no | viral protein/immune system | 2025-01-17 | 2026-01-21 | electron microscopy | 3.18 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV2 | H | L | QEQLVESGGGLVKPGGSLRLSCAGSGFTFSDYDISWIRQAPGRGLEWVAYIDSSGTTIYYADSVRGRFTISRDTARYSVSLQLSSLRAEDTAVYYCTTKFYDYSSGTIPYYYYGLDVWGQGTRVTVSS | DIVMTQSPLSLSVTPGQPASISCKSSESLLHTDGKTYLFWYLHKPGQSPQLLIYEVSSRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTHRPPFTFGPGTKVDIR | QEQLVESGGGLVKPGGSLRLSCAGSGFTFSDYDISWIRQAPGRGLEWVAYIDSSGTTIYYADSVRGRFTISRDTARYSVSLQLSSLRAEDTAVYYCTTKFYDYSSGTIPYYYYGLDVWGQGTRVTVSS | DIVMTQSPLSLSVTPGQPASISCKSSESLLHTDGKTYLFWYLHKPGQSPQLLIYEVSSRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTHRPPFTFGPGTKVDIR | 14.485874 | 13.758446 | 128 | 113 | 128 | 113 | 128 | 113 | 50 | 1a2 heavy chain | 1a2 light chain | homo sapiens | homo sapiens | A;B | protein;protein | rsv pre-f protein;rsv pre-f protein | respiratory syncytial virus a2;respiratory syncytial virus a2 | 45;19 | 22;6 | 0.92;0.6 | HL | train |
9lly_D_I | 9lly | cryo-em structure of rsv pre-f (sc9-10 ds-cav1, strain a2) in complex with fabs 1a2 and 1b6 | no | viral protein/immune system | 2025-01-17 | 2026-01-21 | electron microscopy | 3.18 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | D | I | QVQLQESGPGLERPSETVSLTCTVSGASINSGSYFWGWIRQPPGKGLEWVGSIHYSTTVYYNPSLKSRLTLSMDTSKNQFSLKVHAVTAADTAVYYCASHDWFGEPSPTYFDYWGRGTLLTVSS | DIQMTQSPSTLSATVGDTVTITCRASQSISRYLAWYQQKPGKAPKLLIFRASTLESDVPSRFSGSGSGTEFTLTITNLQPDDFATYYCQQFNTYSPITFGQGTKLEIR | QVQLQESGPGLERPSETVSLTCTVSGASINSGSYFWGWIRQPPGKGLEWVGSIHYSTTVYYNPSLKSRLTLSMDTSKNQFSLKVHAVTAADTAVYYCASHDWFGEPSPTYFDYWGRGTLLTVSS | DIQMTQSPSTLSATVGDTVTITCRASQSISRYLAWYQQKPGKAPKLLIFRASTLESDVPSRFSGSGSGTEFTLTITNLQPDDFATYYCQQFNTYSPITFGQGTKLEI | 14.008134 | 13.321503 | 124 | 108 | 124 | 107 | 124 | 107 | 47 | 1b6 heavy chain | 1b6 light chain | homo sapiens | homo sapiens | A;C | protein;protein | rsv pre-f protein;rsv pre-f protein | respiratory syncytial virus a2;respiratory syncytial virus a2 | 55;19 | 24;5 | 0.8;0.56 | HL | train |
9lly_J_O | 9lly | cryo-em structure of rsv pre-f (sc9-10 ds-cav1, strain a2) in complex with fabs 1a2 and 1b6 | no | viral protein/immune system | 2025-01-17 | 2026-01-21 | electron microscopy | 3.18 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV2 | J | O | QEQLVESGGGLVKPGGSLRLSCAGSGFTFSDYDISWIRQAPGRGLEWVAYIDSSGTTIYYADSVRGRFTISRDTARYSVSLQLSSLRAEDTAVYYCTTKFYDYSSGTIPYYYYGLDVWGQGTRVTVSS | DIVMTQSPLSLSVTPGQPASISCKSSESLLHTDGKTYLFWYLHKPGQSPQLLIYEVSSRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTHRPPFTFGPGTKVDIR | QEQLVESGGGLVKPGGSLRLSCAGSGFTFSDYDISWIRQAPGRGLEWVAYIDSSGTTIYYADSVRGRFTISRDTARYSVSLQLSSLRAEDTAVYYCTTKFYDYSSGTIPYYYYGLDVWGQGTRVTVSS | DIVMTQSPLSLSVTPGQPASISCKSSESLLHTDGKTYLFWYLHKPGQSPQLLIYEVSSRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTHRPPFTFGPGTKVDIR | 14.485884 | 13.758447 | 128 | 113 | 128 | 113 | 128 | 113 | 50 | 1a2 heavy chain | 1a2 light chain | homo sapiens | homo sapiens | A;C | protein;protein | rsv pre-f protein;rsv pre-f protein | respiratory syncytial virus a2;respiratory syncytial virus a2 | 19;45 | 6;22 | 0.6;0.92 | HL | train |
9lly_F_M | 9lly | cryo-em structure of rsv pre-f (sc9-10 ds-cav1, strain a2) in complex with fabs 1a2 and 1b6 | no | viral protein/immune system | 2025-01-17 | 2026-01-21 | electron microscopy | 3.18 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | F | M | QVQLQESGPGLERPSETVSLTCTVSGASINSGSYFWGWIRQPPGKGLEWVGSIHYSTTVYYNPSLKSRLTLSMDTSKNQFSLKVHAVTAADTAVYYCASHDWFGEPSPTYFDYWGRGTLLTVSS | DIQMTQSPSTLSATVGDTVTITCRASQSISRYLAWYQQKPGKAPKLLIFRASTLESDVPSRFSGSGSGTEFTLTITNLQPDDFATYYCQQFNTYSPITFGQGTKLEIR | QVQLQESGPGLERPSETVSLTCTVSGASINSGSYFWGWIRQPPGKGLEWVGSIHYSTTVYYNPSLKSRLTLSMDTSKNQFSLKVHAVTAADTAVYYCASHDWFGEPSPTYFDYWGRGTLLTVSS | DIQMTQSPSTLSATVGDTVTITCRASQSISRYLAWYQQKPGKAPKLLIFRASTLESDVPSRFSGSGSGTEFTLTITNLQPDDFATYYCQQFNTYSPITFGQGTKLEI | 14.008138 | 13.321498 | 124 | 108 | 124 | 107 | 124 | 107 | 47 | 1b6 heavy chain | 1b6 light chain | homo sapiens | homo sapiens | B;C | protein;protein | rsv pre-f protein;rsv pre-f protein | respiratory syncytial virus a2;respiratory syncytial virus a2 | 19;55 | 5;24 | 0.56;0.8 | HL | train |
9lly_G_N | 9lly | cryo-em structure of rsv pre-f (sc9-10 ds-cav1, strain a2) in complex with fabs 1a2 and 1b6 | no | viral protein/immune system | 2025-01-17 | 2026-01-21 | electron microscopy | 3.18 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV2 | G | N | QEQLVESGGGLVKPGGSLRLSCAGSGFTFSDYDISWIRQAPGRGLEWVAYIDSSGTTIYYADSVRGRFTISRDTARYSVSLQLSSLRAEDTAVYYCTTKFYDYSSGTIPYYYYGLDVWGQGTRVTVSS | DIVMTQSPLSLSVTPGQPASISCKSSESLLHTDGKTYLFWYLHKPGQSPQLLIYEVSSRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTHRPPFTFGPGTKVDIR | QEQLVESGGGLVKPGGSLRLSCAGSGFTFSDYDISWIRQAPGRGLEWVAYIDSSGTTIYYADSVRGRFTISRDTARYSVSLQLSSLRAEDTAVYYCTTKFYDYSSGTIPYYYYGLDVWGQGTRVTVSS | DIVMTQSPLSLSVTPGQPASISCKSSESLLHTDGKTYLFWYLHKPGQSPQLLIYEVSSRFSGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQGTHRPPFTFGPGTKVDIR | 14.485883 | 13.758497 | 128 | 113 | 128 | 113 | 128 | 113 | 50 | 1a2 heavy chain | 1a2 light chain | homo sapiens | homo sapiens | B;C | protein;protein | rsv pre-f protein;rsv pre-f protein | respiratory syncytial virus a2;respiratory syncytial virus a2 | 45;19 | 22;6 | 0.92;0.6 | HL | train |
9lm6_D | 9lm6 | cryo-em structure of prefusion-stabilized rsv f (ds-cav1 strain: a2) in complex with nanobody 1d8 | yes | antiviral protein/immune system | 2025-01-18 | 2026-01-21 | electron microscopy | 3.26 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | D | N.A. | MQLQLVESGGGLVQAGGSLRLSCAASEHTYCFYDMSWYRQAPGKEREFVSGIDIDGSARYADSVKGRFTISQDNAANTVYLQMNSLKPEDTAMYYCKTRLCGEADTYCSGGDCRDSGYWGQGTQVTVSSSRGSHHHHHH | N.A. | MQLQLVESGGGLVQAGGSLRLSCAASEHTYCFYDMSWYRQAPGKEREFVSGIDIDGSARYADSVKGRFTISQDNAANTVYLQMNSLKPEDTAMYYCKTRLCGEADTYCSGGDCRDSGYWGQGTQ | N.A. | 14.540647 | 0 | 139 | 0 | 124 | 0 | 124 | 0 | 0 | nanobody 1d8 | N.A. | camelus bactrianus | N.A. | A | protein | fusion glycoprotein f0 | respiratory syncytial virus a2 | 35 | 16 | 0.89 | H_only | train |
9lm6_E | 9lm6 | cryo-em structure of prefusion-stabilized rsv f (ds-cav1 strain: a2) in complex with nanobody 1d8 | yes | antiviral protein/immune system | 2025-01-18 | 2026-01-21 | electron microscopy | 3.26 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | E | N.A. | MQLQLVESGGGLVQAGGSLRLSCAASEHTYCFYDMSWYRQAPGKEREFVSGIDIDGSARYADSVKGRFTISQDNAANTVYLQMNSLKPEDTAMYYCKTRLCGEADTYCSGGDCRDSGYWGQGTQVTVSSSRGSHHHHHH | N.A. | MQLQLVESGGGLVQAGGSLRLSCAASEHTYCFYDMSWYRQAPGKEREFVSGIDIDGSARYADSVKGRFTISQDNAANTVYLQMNSLKPEDTAMYYCKTRLCGEADTYCSGGDCRDSGYWGQGTQ | N.A. | 14.540715 | 0 | 139 | 0 | 124 | 0 | 124 | 0 | 0 | nanobody 1d8 | N.A. | camelus bactrianus | N.A. | B | protein | fusion glycoprotein f0 | respiratory syncytial virus a2 | 35 | 16 | 0.89 | H_only | train |
9lm6_F | 9lm6 | cryo-em structure of prefusion-stabilized rsv f (ds-cav1 strain: a2) in complex with nanobody 1d8 | yes | antiviral protein/immune system | 2025-01-18 | 2026-01-21 | electron microscopy | 3.26 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | MQLQLVESGGGLVQAGGSLRLSCAASEHTYCFYDMSWYRQAPGKEREFVSGIDIDGSARYADSVKGRFTISQDNAANTVYLQMNSLKPEDTAMYYCKTRLCGEADTYCSGGDCRDSGYWGQGTQVTVSSSRGSHHHHHH | N.A. | MQLQLVESGGGLVQAGGSLRLSCAASEHTYCFYDMSWYRQAPGKEREFVSGIDIDGSARYADSVKGRFTISQDNAANTVYLQMNSLKPEDTAMYYCKTRLCGEADTYCSGGDCRDSGYWGQGTQ | N.A. | 14.54069 | 0 | 139 | 0 | 124 | 0 | 124 | 0 | 0 | nanobody 1d8 | N.A. | camelus bactrianus | N.A. | C | protein | fusion glycoprotein f0 | respiratory syncytial virus a2 | 35 | 16 | 0.89 | H_only | train |
9lme_F | 9lme | checkpoint regulator protein in complex with a nanobody | no | immune system | 2025-01-18 | 2026-01-21 | x-ray diffraction | 2.4 | 0.21 | 0.178 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | MAQVQLVESGGGLVQPGGSLRLSCAASGNTFSTAHMSWVRQAPGKGLEWVSGILSNGAGASYADFVKGRFTISRDSAKNTLYLQMDSLKPEDTAVYYCALGFRTLTGLRGQGTQVTVSSGRYPYDVPDYGSGRAGGGSNQL | N.A. | QVQLVESGGGLVQPGGSLRLSCAASGNTFSTAHMSWVRQAPGKGLEWVSGILSNGAGASYADFVKGRFTISRDSAKNTLYLQMDSLKPEDTAVYYCALGFRTLTGLRGQGTQVTVSS | N.A. | 13.171103 | 0 | 141 | 0 | 117 | 0 | 117 | 0 | 0 | t3cl11 | N.A. | lama glama | N.A. | A | protein | cd276 antigen | homo sapiens | 35 | 7 | 0.44 | H_only | train |
9lme_C | 9lme | checkpoint regulator protein in complex with a nanobody | no | immune system | 2025-01-18 | 2026-01-21 | x-ray diffraction | 2.4 | 0.21 | 0.178 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | C | N.A. | MAQVQLVESGGGLVQPGGSLRLSCAASGNTFSTAHMSWVRQAPGKGLEWVSGILSNGAGASYADFVKGRFTISRDSAKNTLYLQMDSLKPEDTAVYYCALGFRTLTGLRGQGTQVTVSSGRYPYDVPDYGSGRAGGGSNQL | N.A. | QVQLVESGGGLVQPGGSLRLSCAASGNTFSTAHMSWVRQAPGKGLEWVSGILSNGAGASYADFVKGRFTISRDSAKNTLYLQMDSLKPEDTAVYYCALGFRTLTGLRGQGTQVTVSS | N.A. | 13.190791 | 0 | 141 | 0 | 117 | 0 | 117 | 0 | 0 | t3cl11 | N.A. | lama glama | N.A. | B | protein | cd276 antigen | homo sapiens | 37 | 8 | 0.44 | H_only | train |
9lmp_H_L | 9lmp | cryo-em structure of antagonist-bounded inactive human gpr4 | no | membrane protein/immune system | 2025-01-19 | 2025-07-02 | electron microscopy | 2.65 | N.A. | N.A. | 40215960 | 10.1016/j.molcel.2025.02.030 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EISEVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT | SDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 23.140203 | 22.393085 | 235 | 216 | 225 | 212 | 225 | 212 | 102 | heavy chain of anti-bril fab | light chain of anti-bril fab | homo sapiens | homo sapiens | R | protein | g-protein coupled receptor 4,soluble cytochrome b562 | homo sapiens | 42 | 19 | 0.83 | HL | train |
9lng_H_L | 9lng | an antibody target the fusion protein of nipah virus | no | viral protein/immune system | 2025-01-21 | 2025-07-02 | electron microscopy | 2.45 | N.A. | N.A. | 40541691 | 10.1016/j.antiviral.2025.106215 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | H | L | EVQLQQSGPELVKPGASMKIACKASGYSFTDYTMNWVKQSHGKNLEWIGLINPYIGGTNYNQKFKGKATLTVDKSSSTAYMELLSLTFEDSAVYYCARDPSRAMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK | DIQMTQSPASLSASVGETVTITCGASENIYGALNWFQRKQGKSPQLLIYGATNLADGMSSRFSGSGSGRQYSLKIGSMHPDDVATYYCQNVLSTPWTFGGGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLQQSGPELVKPGASMKIACKASGYSFTDYTMNWVKQSHGKNLEWIGLINPYIGGTNYNQKFKGKATLTVDKSSSTAYMELLSLTFEDSAVYYCARDPSRAMDYWGQGTSVTVSSA | DIQMTQSPASLSASVGETVTITCGASENIYGALNWFQRKQGKSPQLLIYGATNLADGMSSRFSGSGSGRQYSLKIGSMHPDDVATYYCQNVLSTPWTFGGGTRLE | 13.483515 | 12.780738 | 222 | 214 | 117 | 105 | 117 | 105 | 49 | fab nif03-3c9 heavy chain | fab nif03-3c9 light chain | mus musculus | mus musculus | A;B | protein;protein | fusion glycoprotein f0;fusion glycoprotein f0 | henipavirus nipahense;henipavirus nipahense | 15;59 | 6;20 | 0.86;0.61 | HL | train |
9lng_D_F | 9lng | an antibody target the fusion protein of nipah virus | no | viral protein/immune system | 2025-01-21 | 2025-07-02 | electron microscopy | 2.45 | N.A. | N.A. | 40541691 | 10.1016/j.antiviral.2025.106215 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | D | F | EVQLQQSGPELVKPGASMKIACKASGYSFTDYTMNWVKQSHGKNLEWIGLINPYIGGTNYNQKFKGKATLTVDKSSSTAYMELLSLTFEDSAVYYCARDPSRAMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK | DIQMTQSPASLSASVGETVTITCGASENIYGALNWFQRKQGKSPQLLIYGATNLADGMSSRFSGSGSGRQYSLKIGSMHPDDVATYYCQNVLSTPWTFGGGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLQQSGPELVKPGASMKIACKASGYSFTDYTMNWVKQSHGKNLEWIGLINPYIGGTNYNQKFKGKATLTVDKSSSTAYMELLSLTFEDSAVYYCARDPSRAMDYWGQGTSVTVSSA | DIQMTQSPASLSASVGETVTITCGASENIYGALNWFQRKQGKSPQLLIYGATNLADGMSSRFSGSGSGRQYSLKIGSMHPDDVATYYCQNVLSTPWTFGGGTRLE | 13.467998 | 12.780799 | 222 | 214 | 117 | 105 | 117 | 105 | 47 | fab nif03-3c9 heavy chain | fab nif03-3c9 light chain | mus musculus | mus musculus | A;C | protein;protein | fusion glycoprotein f0;fusion glycoprotein f0 | henipavirus nipahense;henipavirus nipahense | 58;15 | 20;6 | 0.62;0.86 | HL | train |
9lng_E_G | 9lng | an antibody target the fusion protein of nipah virus | no | viral protein/immune system | 2025-01-21 | 2025-07-02 | electron microscopy | 2.45 | N.A. | N.A. | 40541691 | 10.1016/j.antiviral.2025.106215 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | E | G | EVQLQQSGPELVKPGASMKIACKASGYSFTDYTMNWVKQSHGKNLEWIGLINPYIGGTNYNQKFKGKATLTVDKSSSTAYMELLSLTFEDSAVYYCARDPSRAMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK | DIQMTQSPASLSASVGETVTITCGASENIYGALNWFQRKQGKSPQLLIYGATNLADGMSSRFSGSGSGRQYSLKIGSMHPDDVATYYCQNVLSTPWTFGGGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLQQSGPELVKPGASMKIACKASGYSFTDYTMNWVKQSHGKNLEWIGLINPYIGGTNYNQKFKGKATLTVDKSSSTAYMELLSLTFEDSAVYYCARDPSRAMDYWGQGTSVTVSSA | DIQMTQSPASLSASVGETVTITCGASENIYGALNWFQRKQGKSPQLLIYGATNLADGMSSRFSGSGSGRQYSLKIGSMHPDDVATYYCQNVLSTPWTFGGGTRLE | 13.465546 | 12.774913 | 222 | 214 | 117 | 105 | 117 | 105 | 49 | fab nif03-3c9 heavy chain | fab nif03-3c9 light chain | mus musculus | mus musculus | B;C | protein;protein | fusion glycoprotein f0;fusion glycoprotein f0 | henipavirus nipahense;henipavirus nipahense | 15;59 | 6;21 | 0.86;0.64 | HL | train |
9my8_A | 9my8 | d7 herpes virus simplex neutralizing nanobody bound to hsv glycoprotein gd | no | antiviral protein | 2025-01-21 | 2025-08-13 | electron microscopy | 2.3 | N.A. | N.A. | 40716063 | 10.1016/j.celrep.2025.116063 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | A | N.A. | EVQLVESGGGLVQPGGSLRLSCSASGSIPSIWIMYWYRQAPGKGRELVAQITNFGTTVYADSVKGRFTISSDASKNTVYLQMNSLRAEDTAVYYCNLDVTLGPSRGAYWGKGTPVTVSSHHHHHH | N.A. | EVQLVESGGGLVQPGGSLRLSCSASGSIPSIWIMYWYRQAPGKGRELVAQITNFGTTVYADSVKGRFTISSDASKNTVYLQMNSLRAEDTAVYYCNLDVTLGPSRGAYWGKGTPVTVSS | N.A. | 13.864703 | 0 | 125 | 0 | 119 | 0 | 119 | 0 | 0 | d7 neutralizing nanobody against hsv glycoprotein d | N.A. | homo sapiens | N.A. | B | protein | glycoprotein d | human herpesvirus 2 | 47 | 10 | 0.5 | H_only | train |
9my8_H_L | 9my8 | d7 herpes virus simplex neutralizing nanobody bound to hsv glycoprotein gd | no | antiviral protein | 2025-01-21 | 2025-08-13 | electron microscopy | 2.3 | N.A. | N.A. | 40716063 | 10.1016/j.celrep.2025.116063 | 0 | auth_asym_id | VHH+:VL+ | IGHV3 | IGKV1 | H | L | EVQLVESGGGLVQPGGSLRLSCAASGFNFSYYSIHWVRQAPGKGLEWVAYISSSSSYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGYQYWQYHASWYWNGGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTGSHHHHHH | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLVESGGGLVQPGGSLRLSCAASGFNFSYYSIHWVRQAPGKGLEWVAYISSSSSYTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARGYQYWQYHASWYWNGGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | MTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSSSSLITFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 23.203344 | 22.235847 | 244 | 214 | 227 | 208 | 227 | 208 | 117 | anti-nb fab heavy chain | ig-like domain-containing protein | lama glama | lama glama | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9myl_H_L | 9myl | fertilization izumo1 protein ectodomain in complex with anti-sperm antibody obf13 | no | cell adhesion | 2025-01-22 | 2025-03-19 | x-ray diffraction | 3.18 | 0.263 | 0.212 | 40042902 | 10.1073/pnas.2425952122 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | H | L | EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCARWDYGVYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | DIVLTQSQKFMSTSVGDRVSVTCKASQNVDTNVAWYQQKPGQSPKALIYSASYRYSGVPDRFTGSGSGTDFTLTISNVQSEDLAEYFCQQYNSYPYTFGGGTKLEIKADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCARWDYGVYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR | DIVLTQSQKFMSTSVGDRVSVTCKASQNVDTNVAWYQQKPGQSPKALIYSASYRYSGVPDRFTGSGSGTDFTLTISNVQSEDLAEYFCQQYNSYPYTFGGGTKLEIKADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFN | 22.416431 | 22.278843 | 217 | 213 | 208 | 209 | 215 | 209 | 91 | anti-sperm antibody obf13 heavy chain | anti-sperm antibody obf13 light chain | mus musculus | mus musculus | C | protein | izumo sperm-egg fusion protein 1 | mus musculus | 50 | 20 | 0.74 | HL | train |
9myl_A_B | 9myl | fertilization izumo1 protein ectodomain in complex with anti-sperm antibody obf13 | no | cell adhesion | 2025-01-22 | 2025-03-19 | x-ray diffraction | 3.18 | 0.263 | 0.212 | 40042902 | 10.1073/pnas.2425952122 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | A | B | EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCARWDYGVYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | DIVLTQSQKFMSTSVGDRVSVTCKASQNVDTNVAWYQQKPGQSPKALIYSASYRYSGVPDRFTGSGSGTDFTLTISNVQSEDLAEYFCQQYNSYPYTFGGGTKLEIKADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCARWDYGVYWGQGTTLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRD | DIVLTQSQKFMSTSVGDRVSVTCKASQNVDTNVAWYQQKPGQSPKALIYSASYRYSGVPDRFTGSGSGTDFTLTISNVQSEDLAEYFCQQYNSYPYTFGGGTKLEIKADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR | 22.596626 | 22.553276 | 217 | 213 | 212 | 210 | 216 | 210 | 91 | anti-sperm antibody obf13 heavy chain | anti-sperm antibody obf13 light chain | mus musculus | mus musculus | D | protein | izumo sperm-egg fusion protein 1 | mus musculus | 47 | 19 | 0.73 | HL | train |
9mz8_B_A | 9mz8 | crystal structure of 19b fab bound to the third variable (v3) loop peptide from the hiv-1 5768x-p27 envelope (env) glycoprotein | no | immune system/viral protein | 2025-01-22 | 2026-01-21 | x-ray diffraction | 1.74 | 0.226 | 0.19 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | B | A | EVQLVQSGGALIQPGGSLRLSCAASGFTFVDYAMSWVRQAPGKGLQWVSTIIGSGADTYYTDSVKGRFTISRDNSNNTVHLQMNSLRADDTALYYCVRGVFDLWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS | DIVLTQSPPSLSASVGDRVTITCQASQDISDHLSWFQQKPGKAPKLLVYGVSSLEAGVPSRFSVSGSGTHFTFTVNGLQPEDLATYFCQQYDDLPWTFGPGTVVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | EVQLVQSGGALIQPGGSLRLSCAASGFTFVDYAMSWVRQAPGKGLQWVSTIIGSGADTYYTDSVKGRFTISRDNSNNTVHLQMNSLRADDTALYYCVRGVFDLWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK | DIVLTQSPPSLSASVGDRVTITCQASQDISDHLSWFQQKPGKAPKLLVYGVSSLEAGVPSRFSVSGSGTHFTFTVNGLQPEDLATYFCQQYDDLPWTFGPGTVVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 20.565994 | 23.253662 | 216 | 213 | 209 | 213 | 215 | 213 | 88 | 19b fab heavy chain | 19b fab light chain | homo sapiens | homo sapiens | D | peptide | envelope glycoprotein 5768x-p27 | human immunodeficiency virus 1 | 27 | 13 | 0.81 | HL | train |
9mz9_B_A | 9mz9 | crystal structure of 19b fab | no | immune system | 2025-01-22 | 2026-01-21 | x-ray diffraction | 2.1 | 0.247 | 0.216 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | B | A | EVQLVQSGGALIQPGGSLRLSCAASGFTFVDYAMSWVRQAPGKGLQWVSTIIGSGADTYYTDSVKGRFTISRDNSNNTVHLQMNSLRADDTALYYCVRGVFDLWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS | DIVLTQSPPSLSASVGDRVTITCQASQDISDHLSWFQQKPGKAPKLLVYGVSSLEAGVPSRFSVSGSGTHFTFTVNGLQPEDLATYFCQQYDDLPWTFGPGTVVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVQSGGALIQPGGSLRLSCAASGFTFVDYAMSWVRQAPGKGLQWVSTIIGSGADTYYTDSVKGRFTISRDNSNNTVHLQMNSLRADDTALYYCVRGVFDLWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS | DIVLTQSPPSLSASVGDRVTITCQASQDISDHLSWFQQKPGKAPKLLVYGVSSLEAGVPSRFSVSGSGTHFTFTVNGLQPEDLATYFCQQYDDLPWTFGPGTVVEVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 21.042658 | 23.471735 | 216 | 214 | 212 | 214 | 216 | 214 | 93 | 19b fab heavy chain | 19b fab light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9loe_B_C | 9loe | cryo-em structure of sftsv gn in complex with zs004-1c5 | no | viral protein/immune system | 2025-01-23 | 2026-01-28 | electron microscopy | 2.99 | N.A. | N.A. | N.A. | 10.15302/vita.2025.12.0002 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV2 | B | C | QVQLVQSGGALVKPGGSLRLSCAGSGLTLSNAWMTWVRQGPGKGLEWVGRMKSKFAGGATDYAAAVKGRFTISRGDSENTVYLQMNSLKTEDTAVYYCTTDRWEVDYDYTWGTYHRNMGDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | QLVLTQPASVSGSPGQSITISCTGTSSDIGGDYYVSWYQQHPGKAPKLLIFDVSNRPSGMSDRFSGSKSGNTASLTISGLQAEDEGDYYCSSYTATNTRVFGGGTKVTVLRQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVQSGGALVKPGGSLRLSCAGSGLTLSNAWMTWVRQGPGKGLEWVGRMKSKFAGGATDYAAAVKGRFTISRGDSENTVYLQMNSLKTEDTAVYYCTTDRWEVDYDYTWGTYHRNMGDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | QLVLTQPASVSGSPGQSITISCTGTSSDIGGDYYVSWYQQHPGKAPKLLIFDVSNRPSGMSDRFSGSKSGNTASLTISGLQAEDEGDYYCSSYTATNTRVFGGGTKVTVLRQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | 25.317366 | 21.763031 | 230 | 216 | 230 | 216 | 230 | 216 | 98 | heavy chain of ysj1c5 | light chain of ysj1c5 | homo sapiens | homo sapiens | A | protein | envelopment polyprotein | severe fever with thrombocytopenia syndrome virus | 37 | 11 | 1 | HL | train |
9log_B_C | 9log | cryo-em structure of sftsv gn in complex with zs01s-65 | no | viral protein/immune system | 2025-01-23 | 2026-01-28 | electron microscopy | 3.5 | N.A. | N.A. | N.A. | 10.15302/vita.2025.12.0002 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGLV1 | B | C | QVQLVQSGAGMKKPGSSVKVSCKASGGSFSGYSFNWVRQAPGQGLEWMGGIVPIFGTAVYAQKFRGRVAITADESTTTAYMELSSLRYEDTAVYYCARDPGSNWAAGDIRDYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKV | QSVLTQPPSVSGAPGQRVTLSCTGSSSNIGADYDVHWYQQLPGAAPKLLIYGNINRPSGVPARFSGSKSGTSASLAITGLQADDEADYYCQSYDSRLSAYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVQSGAGMKKPGSSVKVSCKASGGSFSGYSFNWVRQAPGQGLEWMGGIVPIFGTAVYAQKFRGRVAITADESTTTAYMELSSLRYEDTAVYYCARDPGSNWAAGDIRDYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK | QSVLTQPPSVSGAPGQRVTLSCTGSSSNIGADYDVHWYQQLPGAAPKLLIYGNINRPSGVPARFSGSKSGTSASLAITGLQADDEADYYCQSYDSRLSAYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC | 23.473904 | 22.180872 | 225 | 217 | 224 | 216 | 224 | 216 | 98 | heavy chain of 65 | light chain of 65 | homo sapiens | homo sapiens | A | protein | envelopment polyprotein | severe fever with thrombocytopenia syndrome virus | 46 | 18 | 0.82 | HL | train |
9loy_H_I | 9loy | cryo-em structure of sars-cov-2 jn.1 spike glycoprotein in complex with f61r2-780 fab | yes | viral protein/immune system | 2025-01-23 | 2026-01-28 | electron microscopy | 2.66 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | H | I | EVQLVESGGGLVQPGGSLRLSCEASEIIVNRNYMNWVRQAPGKGLEWVSIIYPGGSTFYADSVKGRFTISRDNSKNTMYLQMNSLRAEDTAVYYCARSYGDFYVDFWGQGTLVTVSS | VLTQSPGTLSLSPGERATLSCRATQSIPSTYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLSINRLEPEDFAVYYCQHYGTSPFTFGPGTKVDIK | EVQLVESGGGLVQPGGSLRLSCEASEIIVNRNYMNWVRQAPGKGLEWVSIIYPGGSTFYADSVKGRFTISRDNSKNTMYLQMNSLRAEDTAVYYCARSYGDFYVDFWGQGTLVTVSS | GTLSLSPGERATLSCRATQSIPSTYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLSINRLEPEDFAVYYCQHYGTSPFTFGPGTKVDIK | 13.601446 | 13.14856 | 117 | 106 | 117 | 100 | 117 | 100 | 40 | f61r2-780 heavy chain | f61r2-780 light chain | homo sapiens | homo sapiens | A | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 52 | 18 | 0.75 | HL | train |
9loy_E_F | 9loy | cryo-em structure of sars-cov-2 jn.1 spike glycoprotein in complex with f61r2-780 fab | yes | viral protein/immune system | 2025-01-23 | 2026-01-28 | electron microscopy | 2.66 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | E | F | EVQLVESGGGLVQPGGSLRLSCEASEIIVNRNYMNWVRQAPGKGLEWVSIIYPGGSTFYADSVKGRFTISRDNSKNTMYLQMNSLRAEDTAVYYCARSYGDFYVDFWGQGTLVTVSS | VLTQSPGTLSLSPGERATLSCRATQSIPSTYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLSINRLEPEDFAVYYCQHYGTSPFTFGPGTKVDIK | EVQLVESGGGLVQPGGSLRLSCEASEIIVNRNYMNWVRQAPGKGLEWVSIIYPGGSTFYADSVKGRFTISRDNSKNTMYLQMNSLRAEDTAVYYCARSYGDFYVDFWGQGTLVTVSS | GTLSLSPGERATLSCRATQSIPSTYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLSINRLEPEDFAVYYCQHYGTSPFTFGPGTKVDIK | 13.60143 | 13.14857 | 117 | 106 | 117 | 100 | 117 | 100 | 40 | f61r2-780 heavy chain | f61r2-780 light chain | homo sapiens | homo sapiens | C | protein | spike glycoprotein | severe acute respiratory syndrome coronavirus 2 | 52 | 18 | 0.75 | HL | train |
9loz_B_C | 9loz | cryo-em structure of sars-cov-2 jn.1 rbd in complex with f61r2-780 fab | yes | viral protein/immune system | 2025-01-23 | 2026-01-28 | electron microscopy | 3.55 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | B | C | EVQLVESGGGLVQPGGSLRLSCEASEIIVNRNYMNWVRQAPGKGLEWVSIIYPGGSTFYADSVKGRFTISRDNSKNTMYLQMNSLRAEDTAVYYCARSYGDFYVDFWGQGTLVTVSS | VLTQSPGTLSLSPGERATLSCRATQSIPSTYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLSINRLEPEDFAVYYCQHYGTSPFTFGPGTKVDIKR | EVQLVESGGGLVQPGGSLRLSCEASEIIVNRNYMNWVRQAPGKGLEWVSIIYPGGSTFYADSVKGRFTISRDNSKNTMYLQMNSLRAEDTAVYYCARSYGDFYVDFWGQGTLVTVSS | GTLSLSPGERATLSCRATQSIPSTYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLSINRLEPEDFAVYYCQHYGTSPFTFGPGTKVDIK | 13.601435 | 13.14975 | 117 | 107 | 117 | 100 | 117 | 100 | 40 | f61r2-780 heavy chain | f61r2-780 light chain | homo sapiens | homo sapiens | A | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 52 | 18 | 0.75 | HL | train |
9lp1_A_B | 9lp1 | cryo-em structure of sars-cov-2 kp.3.1.1 rbd in complex with f61r2-780 fab | yes | viral protein/immune system | 2025-01-23 | 2026-01-28 | electron microscopy | 3.47 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | A | B | EVQLVESGGGLVQPGGSLRLSCEASEIIVNRNYMNWVRQAPGKGLEWVSIIYPGGSTFYADSVKGRFTISRDNSKNTMYLQMNSLRAEDTAVYYCARSYGDFYVDFWGQGTLVTVSS | VLTQSPGTLSLSPGERATLSCRATQSIPSTYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLSINRLEPEDFAVYYCQHYGTSPFTFGPGTKVDIKR | EVQLVESGGGLVQPGGSLRLSCEASEIIVNRNYMNWVRQAPGKGLEWVSIIYPGGSTFYADSVKGRFTISRDNSKNTMYLQMNSLRAEDTAVYYCARSYGDFYVDFWGQGTLVTVSS | PGTLSLSPGERATLSCRATQSIPSTYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLSINRLEPEDFAVYYCQHYGTSPFTFGPGTKVDIK | 13.624712 | 13.167699 | 117 | 107 | 117 | 101 | 117 | 101 | 38 | f61r2-780 heavy chain | f61r2-780 light chain | homo sapiens | homo sapiens | C | protein | spike protein s1 | severe acute respiratory syndrome coronavirus 2 | 53 | 15 | 0.65 | HL | train |
9n0d_E_D | 9n0d | junv gp1, gp2, ssp complex with neutralizing antibody in a pseudotyped virus membrane | no | viral protein | 2025-01-24 | 2025-07-23 | electron microscopy | 3.8 | N.A. | N.A. | 40632652 | 10.1016/j.celrep.2025.115971 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | E | D | VALVESGGGLVQPGGSLKLSCASGASFSNAGMSWVRQTPDRRLELVAAINRDGDITYHPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCAREDYYGLYFYVMDYWGQGTSVTVA | QIVLTQSPAIMSASPGEKVTITCSASSIVSYMHWFQQKPGTSPKLWIYGTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRNSYPPTFGGGTKLEIK | VALVESGGGLVQPGGSLKLSCASGASFSNAGMSWVRQTPDRRLELVAAINRDGDITYHPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCAREDYYGLYFYVMDYWGQGTSVTVA | QIVLTQSPAIMSASPGEKVTITCSASSIVSYMHWFQQKPGTSPKLWIYGTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRNSYPPTFGGGTKLEIK | 14.261371 | 13.295497 | 119 | 106 | 119 | 106 | 119 | 106 | 41 | neutralizing antibody heavy chain | neutralizing antibody light chain | mus musculus | mus musculus | B | protein | pre-glycoprotein polyprotein gp complex | mammarenavirus juninense | 44 | 19 | 0.83 | HL | train |
9n0d_J_I | 9n0d | junv gp1, gp2, ssp complex with neutralizing antibody in a pseudotyped virus membrane | no | viral protein | 2025-01-24 | 2025-07-23 | electron microscopy | 3.8 | N.A. | N.A. | 40632652 | 10.1016/j.celrep.2025.115971 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | J | I | VALVESGGGLVQPGGSLKLSCASGASFSNAGMSWVRQTPDRRLELVAAINRDGDITYHPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCAREDYYGLYFYVMDYWGQGTSVTVA | QIVLTQSPAIMSASPGEKVTITCSASSIVSYMHWFQQKPGTSPKLWIYGTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRNSYPPTFGGGTKLEIK | VALVESGGGLVQPGGSLKLSCASGASFSNAGMSWVRQTPDRRLELVAAINRDGDITYHPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCAREDYYGLYFYVMDYWGQGTSVTVA | QIVLTQSPAIMSASPGEKVTITCSASSIVSYMHWFQQKPGTSPKLWIYGTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRNSYPPTFGGGTKLEIK | 14.261374 | 13.295506 | 119 | 106 | 119 | 106 | 119 | 106 | 41 | neutralizing antibody heavy chain | neutralizing antibody light chain | mus musculus | mus musculus | G | protein | pre-glycoprotein polyprotein gp complex | mammarenavirus juninense | 44 | 19 | 0.83 | HL | train |
9n0d_O_N | 9n0d | junv gp1, gp2, ssp complex with neutralizing antibody in a pseudotyped virus membrane | no | viral protein | 2025-01-24 | 2025-07-23 | electron microscopy | 3.8 | N.A. | N.A. | 40632652 | 10.1016/j.celrep.2025.115971 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | O | N | VALVESGGGLVQPGGSLKLSCASGASFSNAGMSWVRQTPDRRLELVAAINRDGDITYHPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCAREDYYGLYFYVMDYWGQGTSVTVA | QIVLTQSPAIMSASPGEKVTITCSASSIVSYMHWFQQKPGTSPKLWIYGTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRNSYPPTFGGGTKLEIK | VALVESGGGLVQPGGSLKLSCASGASFSNAGMSWVRQTPDRRLELVAAINRDGDITYHPDSVKGRFTISRDNAKNTLYLQMSSLKSEDTAMYYCAREDYYGLYFYVMDYWGQGTSVTVA | QIVLTQSPAIMSASPGEKVTITCSASSIVSYMHWFQQKPGTSPKLWIYGTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRNSYPPTFGGGTKLEIK | 14.261375 | 13.29548 | 119 | 106 | 119 | 106 | 119 | 106 | 41 | neutralizing antibody heavy chain | neutralizing antibody light chain | mus musculus | mus musculus | L | protein | pre-glycoprotein polyprotein gp complex | mammarenavirus juninense | 44 | 19 | 0.83 | HL | train |
9i3w_H_L | 9i3w | structure of anti-ev71 human monoclonal antibody 16-2-8c fab | no | antiviral protein | 2025-01-24 | 2026-02-04 | x-ray diffraction | 1.14 | 0.194 | 0.166 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGLV1 | H | L | QLQLQESGPGLVKPSETLSLTCSVSGVSISSRTYYWGWIRQPPGKGLEWIGMIYYSGITHYSPSLKSPVTISVDKSKNQFSLVLTSVTAADTAMYYCVRHSSPQCSPTSCYEGPYTRDWYVDYWGQGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKHHHHHH | QSVLTQPPSASGTPGQRVTISCSGSSSNIRGNTVNWYQKLPGAAPTLLIYTNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYFCAAWDGSLNAVVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QLQLQESGPGLVKPSETLSLTCSVSGVSISSRTYYWGWIRQPPGKGLEWIGMIYYSGITHYSPSLKSPVTISVDKSKNQFSLVLTSVTAADTAMYYCVRHSSPQCSPTSCYEGPYTRDWYVDYWGQGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | QSVLTQPPSASGTPGQRVTISCSGSSSNIRGNTVNWYQKLPGAAPTLLIYTNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYFCAAWDGSLNAVVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC | 22.052671 | 24.573399 | 245 | 216 | 234 | 215 | 234 | 215 | 90 | heavy chain | light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9i40_B_A | 9i40 | structure of anti-ev71 human monoclonal antibody 16-3-4d fab | no | antiviral protein | 2025-01-24 | 2026-02-04 | x-ray diffraction | 2.78 | 0.277 | 0.241 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGLV1 | B | A | QLQLQESGPGLVKPSETLSLTCSVSGGSISISSYYWGWIRLPPGKGLEWIGSVYYSGPTYHNPSLKSRVTISLDTANNQFSLKLTSVTGADAAVYYCARHVPVAGFGYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKHHHHHH | QSVLTQPPSASETPGQRVTISCSGSRSNIGRKTVNWYQRLPGTAPKLLIYSDTQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNNWVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QLQLQESGPGLVKPSETLSLTCSVSGGSISISSYYWGWIRLPPGKGLEWIGSVYYSGPTYHNPSLKSRVTISLDTANNQFSLKLTSVTGADAAVYYCARHVPVAGFGYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK | SVLTQPPSASETPGQRVTISCSGSRSNIGRKTVNWYQRLPGTAPKLLIYSDTQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNNWVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC | 23.473503 | 24.275888 | 237 | 216 | 231 | 214 | 231 | 214 | 97 | heavy chain | light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9i40_H_L | 9i40 | structure of anti-ev71 human monoclonal antibody 16-3-4d fab | no | antiviral protein | 2025-01-24 | 2026-02-04 | x-ray diffraction | 2.78 | 0.277 | 0.241 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGLV1 | H | L | QLQLQESGPGLVKPSETLSLTCSVSGGSISISSYYWGWIRLPPGKGLEWIGSVYYSGPTYHNPSLKSRVTISLDTANNQFSLKLTSVTGADAAVYYCARHVPVAGFGYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKHHHHHH | QSVLTQPPSASETPGQRVTISCSGSRSNIGRKTVNWYQRLPGTAPKLLIYSDTQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNNWVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QLQLQESGPGLVKPSETLSLTCSVSGGSISISSYYWGWIRLPPGKGLEWIGSVYYSGPTYHNPSLKSRVTISLDTANNQFSLKLTSVTGADAAVYYCARHVPVAGFGYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDK | VLTQPPSASETPGQRVTISCSGSRSNIGRKTVNWYQRLPGTAPKLLIYSDTQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNNWVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | 22.18658 | 24.371021 | 237 | 216 | 231 | 214 | 231 | 214 | 104 | heavy chain | light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9i41_H_L | 9i41 | structure of anti-ev71 human monoclonal antibody 16-3-3c fab | no | antiviral protein | 2025-01-24 | 2026-02-04 | x-ray diffraction | 1.32 | 0.174 | 0.143 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV2 | H | L | EVQLVESGGGLVQPGGSLRLSCAASGFTFDDYVMHWVRQAPGKGLEWVSSISWHGGSIAYAGSVKGRFTISRDNARNSLFLQMNSLRTEDTALYFCAKDGPSSGWSYQNYYNAMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKHHHHHH | QSALTQPRSVSGSPGQSVTITCTGSSIDVGGYNYVSWYQQHPGKAPKLIIYDVGKRPSGVPARFSGSKSGNTASLTISGLQAEDETDYYCCSYAGSDTLVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGGGLVQPGGSLRLSCAASGFTFDDYVMHWVRQAPGKGLEWVSSISWHGGSIAYAGSVKGRFTISRDNARNSLFLQMNSLRTEDTALYFCAKDGPSSGWSYQNYYNAMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | SALTQPRSVSGSPGQSVTITCTGSSIDVGGYNYVSWYQQHPGKAPKLIIYDVGKRPSGVPARFSGSKSGNTASLTISGLQAEDETDYYCCSYAGSDTLVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 21.849703 | 22.827652 | 238 | 216 | 228 | 212 | 228 | 212 | 98 | heavy chain | light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9i42_B_A | 9i42 | structure of anti-ev71 human monoclonal antibody 16-2-2d fab | no | antiviral protein | 2025-01-24 | 2026-02-04 | x-ray diffraction | 1.92 | 0.192 | 0.164 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGLV1 | B | A | EVQLVQSGAEVREPGASVKVSCKASGYNFIYYYIHWVRQAPGQGLEWMGMVRPSGGRTIYARKFQGRVTMTRDTFTNTLFMELSSLRPEDTAVYYCARGPGPGGKYYYDSSDAYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKHHHHHH | QSVLTQPPSASGTPGQRVTSSCSGSSSNIGRNTVDWYQKLPGTAPKLLIHSNNQRPSGVPDRFSGSKSGTTASLAISGLQSEDEADYYCAAWDDRLNAYVFGSGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVQSGAEVREPGASVKVSCKASGYNFIYYYIHWVRQAPGQGLEWMGMVRPSGGRTIYARKFQGRVTMTRDTFTNTLFMELSSLRPEDTAVYYCARGPGPGGKYYYDSSDAYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | QSVLTQPPSASGTPGQRVTSSCSGSSSNIGRNTVDWYQKLPGTAPKLLIHSNNQRPSGVPDRFSGSKSGTTASLAISGLQSEDEADYYCAAWDDRLNAYVFGSGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 21.113441 | 24.281683 | 243 | 216 | 229 | 213 | 233 | 213 | 94 | heavy chain 1 | light chain 1 | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9i42_H_L | 9i42 | structure of anti-ev71 human monoclonal antibody 16-2-2d fab | no | antiviral protein | 2025-01-24 | 2026-02-04 | x-ray diffraction | 1.92 | 0.192 | 0.164 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGLV1 | H | L | EVQLVQSGAEVREPGASVKVSCKASGYNFIYYYIHWVRQAPGQGLEWMGMVRPSGGRTIYARKFQGRVTMTRDTFTNTLFMELSSLRPEDTAVYYCARGPGPGGKYYYDSSDAYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKHHHHHH | QSVLTQPPSASGTPGQRVTSSCSGSSSNIGRNTVDWYQKLPGTAPKLLIHSNNQRPSGVPDRFSGSKSGTTASLAISGLQSEDEADYYCAAWDDRLNAYVFGSGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVQSGAEVREPGASVKVSCKASGYNFIYYYIHWVRQAPGQGLEWMGMVRPSGGRTIYARKFQGRVTMTRDTFTNTLFMELSSLRPEDTAVYYCARGPGPGGKYYYDSSDAYYYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | QSVLTQPPSASGTPGQRVTSSCSGSSSNIGRNTVDWYQKLPGTAPKLLIHSNNQRPSGVPDRFSGSKSGTTASLAISGLQSEDEADYYCAAWDDRLNAYVFGSGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTE | 21.781069 | 24.119728 | 243 | 216 | 232 | 214 | 235 | 214 | 99 | heavy chain 1 | light chain 1 | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9i43_H_L | 9i43 | structure of anti-ev71 human monoclonal antibody 16-2-9d fab | no | antiviral protein | 2025-01-24 | 2026-02-04 | x-ray diffraction | 1.18 | 0.176 | 0.145 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGLV1 | H | L | QVQLQESGPGLVKPSETLSLTCSVSGVSISSRTYYWGWIRQPPGKGLEWIGTIYYSGITHYSPSLKSPVTISVDKSKNQFSLELTSVTAADTAMYYCARHSSPQCSPTSCYEGPYTRDWYVDYWGQGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKHHHHHH | QSALTQPPSASGTPGQRVTISCSGSSSNIRSNTVNWYQKLPGAAPTLLIYTNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYFCAAWDGSLNAVVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLQESGPGLVKPSETLSLTCSVSGVSISSRTYYWGWIRQPPGKGLEWIGTIYYSGITHYSPSLKSPVTISVDKSKNQFSLELTSVTAADTAMYYCARHSSPQCSPTSCYEGPYTRDWYVDYWGQGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | ALTQPPSASGTPGQRVTISCSGSSSNIRSNTVNWYQKLPGAAPTLLIYTNNQRPSGVPDRFSGSKSGTSASLAISGLQSEDEADYFCAAWDGSLNAVVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 22.006582 | 24.386738 | 245 | 216 | 235 | 211 | 235 | 211 | 97 | heavy chain | light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9i4b_A_B | 9i4b | structure of anti-ev71 human monoclonal antibody 17-2-12a fab | no | antiviral protein | 2025-01-24 | 2026-02-04 | x-ray diffraction | 2.68 | 0.253 | 0.208 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV7 | A | B | QVQLVESGGGLVQPGGSLRLSCAASGFTFNSYAMNWVRQAPGRGLEWVSVISDTGGTTYYTKSVKGRFTVSRDNSKNTLYLDLNSLRAEDTAIYYCAKSVAARRFYFYYGMDAWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKHHHHHH | QAVVTQEPSLTVSPGGTVTLTCASSTGAVTSDYYPNWFQQKPGQAPRSLIYSTSNTHSWTPARFSGSLLGGKAALTLSNVQPKDEAEYFCLLYYGGSQLWVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVESGGGLVQPGGSLRLSCAASGFTFNSYAMNWVRQAPGRGLEWVSVISDTGGTTYYTKSVKGRFTVSRDNSKNTLYLDLNSLRAEDTAIYYCAKSVAARRFYFYYGMDAWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | QAVVTQEPSLTVSPGGTVTLTCASSTGAVTSDYYPNWFQQKPGQAPRSLIYSTSNTHSWTPARFSGSLLGGKAALTLSNVQPKDEAEYFCLLYYGGSQLWVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP | 20.4925 | 23.893936 | 235 | 217 | 219 | 213 | 225 | 213 | 95 | heavy chain | light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9i4b_H_L | 9i4b | structure of anti-ev71 human monoclonal antibody 17-2-12a fab | no | antiviral protein | 2025-01-24 | 2026-02-04 | x-ray diffraction | 2.68 | 0.253 | 0.208 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV7 | H | L | QVQLVESGGGLVQPGGSLRLSCAASGFTFNSYAMNWVRQAPGRGLEWVSVISDTGGTTYYTKSVKGRFTVSRDNSKNTLYLDLNSLRAEDTAIYYCAKSVAARRFYFYYGMDAWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKHHHHHH | QAVVTQEPSLTVSPGGTVTLTCASSTGAVTSDYYPNWFQQKPGQAPRSLIYSTSNTHSWTPARFSGSLLGGKAALTLSNVQPKDEAEYFCLLYYGGSQLWVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVESGGGLVQPGGSLRLSCAASGFTFNSYAMNWVRQAPGRGLEWVSVISDTGGTTYYTKSVKGRFTVSRDNSKNTLYLDLNSLRAEDTAIYYCAKSVAARRFYFYYGMDAWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | QAVVTQEPSLTVSPGGTVTLTCASSTGAVTSDYYPNWFQQKPGQAPRSLIYSTSNTHSWTPARFSGSLLGGKAALTLSNVQPKDEAEYFCLLYYGGSQLWVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 20.775522 | 23.734182 | 235 | 217 | 219 | 214 | 225 | 214 | 98 | heavy chain | light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9i4c_H_L | 9i4c | structure of anti-ev71 human monoclonal antibody 17-1-12a fab | no | antiviral protein | 2025-01-24 | 2026-02-04 | x-ray diffraction | 2.83 | 0.267 | 0.223 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV2 | H | L | EVQLVESGGGLVKPGGSLRLSCEASEFTSNDYYMSWIRQAPGKGLEWISDIRSRGSHTNYADSVKGRFTMSRDIGENSVYLHMNSLRVEDTAVYYCAREKWEKLGKLYYYGLDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKHHHHHH | DIVMTQSPLSLPVTPGEPASISCRSSQSLLNSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPGRFSGSGSGTDFTLKISRVEAEDVGIFYCMQALQTPRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVKPGGSLRLSCEASEFTSNDYYMSWIRQAPGKGLEWISDIRSRGSHTNYADSVKGRFTMSRDIGENSVYLHMNSLRVEDTAVYYCAREKWEKLGKLYYYGLDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIVMTQSPLSLPVTPGEPASISCRSSQSLLNSNGYNYLDWYLQKPGQSPQLLIYLGSNRASGVPGRFSGSGSGTDFTLKISRVEAEDVGIFYCMQALQTPRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.048456 | 23.945364 | 236 | 219 | 228 | 218 | 228 | 218 | 90 | heavy chain | light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
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