PDB_ID_chain stringlengths 6 10 | PDB_ID stringlengths 4 4 | Title stringlengths 4 230 | Mutation(s) stringclasses 2
values | Classification stringclasses 305
values | Deposit_date stringdate 1976-03-17 00:00:00 2026-01-20 00:00:00 | Release_date stringdate 1976-05-19 00:00:00 2026-02-25 00:00:00 | Method stringclasses 5
values | Resolution stringclasses 459
values | R_free stringclasses 227
values | R_work stringclasses 211
values | PMID stringlengths 4 8 | DOI stringlengths 4 68 | Model_index int64 0 76 | Asym_ID_type stringclasses 2
values | Ab_type stringclasses 30
values | H_subgroup stringclasses 8
values | L_subgroup stringclasses 19
values | H_chain_ID stringclasses 60
values | L_chain_ID stringclasses 58
values | H_fas_seq stringlengths 4 919 | L_fas_seq stringlengths 4 627 | H_filled_pdb_seq stringlengths 4 896 | L_filled_pdb_seq stringlengths 4 523 | H_mean_radius float64 0 79.7 | L_mean_radius float64 0 84.3 | H_fas_seq_len int64 0 919 | L_fas_seq_len int64 0 627 | H_pdb_seq_len int64 0 879 | L_pdb_seq_len int64 0 523 | H_filled_seq_len int64 0 896 | L_filled_seq_len int64 0 523 | HL_inf_res_num int64 0 175 | H_mol_name stringlengths 2 331 | L_mol_name stringlengths 2 151 | H_species stringclasses 68
values | L_species stringclasses 42
values | Ag_chain_ID(s) stringclasses 279
values | Ag_type(s) stringclasses 16
values | Ag_mol_name(s) stringlengths 2 390 | Ag_species stringclasses 743
values | Ab_ag_inf_res_num stringlengths 1 11 | CDR_inf_res_num stringclasses 444
values | CDR_inf_res_ratio stringlengths 1 19 | hl_label stringclasses 3
values | split stringclasses 1
value |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
9i4d_A_B | 9i4d | structure of anti-ev71 human monoclonal antibody 17-2-2b fab | no | antiviral protein | 2025-01-24 | 2026-02-04 | x-ray diffraction | 2.56 | 0.243 | 0.194 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGLV2 | A | B | QVQLQESGPGLVKPSETLSLTCTVSGGSVSSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARTYGSGSYWGYFEYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKHHHHHH | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNNWVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLQESGPGLVKPSETLSLTCTVSGGSVSSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARTYGSGSYWGYFEYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | ALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNNWVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 21.274805 | 24.289728 | 234 | 216 | 224 | 211 | 224 | 211 | 105 | heavy chain | light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9i4d_H_L | 9i4d | structure of anti-ev71 human monoclonal antibody 17-2-2b fab | no | antiviral protein | 2025-01-24 | 2026-02-04 | x-ray diffraction | 2.56 | 0.243 | 0.194 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGLV2 | H | L | QVQLQESGPGLVKPSETLSLTCTVSGGSVSSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARTYGSGSYWGYFEYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKHHHHHH | QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNNWVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLQESGPGLVKPSETLSLTCTVSGGSVSSSSYYWGWIRQPPGKGLEWIGSIYYSGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARTYGSGSYWGYFEYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | SALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYAGSNNWVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT | 21.326529 | 23.970121 | 234 | 216 | 225 | 212 | 225 | 212 | 95 | heavy chain | light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9i4e_A_B | 9i4e | structure of anti-ev71 human monoclonal antibody 34-1-6d fab | no | antiviral protein | 2025-01-24 | 2026-02-04 | x-ray diffraction | 1.63 | 0.209 | 0.158 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV7 | IGKV1 | A | B | EVQLVESGSELKKPGASVKVSCKASGYTFTSYAMNWVRQAPGQGLEWMGWINTNTGNPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCARAKALLYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKHHHHHH | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGSELKKPGASVKVSCKASGYTFTSYAMNWVRQAPGQGLEWMGWINTNTGNPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCARAKALLYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 20.83501 | 23.640368 | 231 | 214 | 221 | 211 | 221 | 211 | 99 | heavy chain | light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9i4e_H_L | 9i4e | structure of anti-ev71 human monoclonal antibody 34-1-6d fab | no | antiviral protein | 2025-01-24 | 2026-02-04 | x-ray diffraction | 1.63 | 0.209 | 0.158 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV7 | IGKV1 | H | L | EVQLVESGSELKKPGASVKVSCKASGYTFTSYAMNWVRQAPGQGLEWMGWINTNTGNPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCARAKALLYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKHHHHHH | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGSELKKPGASVKVSCKASGYTFTSYAMNWVRQAPGQGLEWMGWINTNTGNPTYAQGFTGRFVFSLDTSVSTAYLQISSLKAEDTAVYYCARAKALLYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 20.777695 | 23.654406 | 231 | 214 | 221 | 211 | 221 | 211 | 101 | heavy chain | light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9i5e_M | 9i5e | a coiled coil module strategy for high-resolution cryo-em structures of small proteins for drug discovery | yes | structural protein | 2025-01-28 | 2025-11-12 | electron microscopy | 3.77 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | M | N.A. | VQLQESGGGLVQAGDSLRLSCAASGRTFSTYPMGWFRQAPGKEREFVAASSSRAYYADSVKGRFTISRNNAKNTVYLQMNSLKPEDTAVYYCVADSSPYYRRYDAAQDYDYWGQGTQVTVSS | N.A. | VQLQESGGGLVQAGDSLRLSCAASGRTFSTYPMGWFRQAPGKEREFVAASSSRAYYADSVKGRFTISRNNAKNTVYLQMNSLKPEDTAVYYCVADSSPYYRRYDAAQDYDYWGQGTQVTVSS | N.A. | 14.294016 | 0 | 122 | 0 | 122 | 0 | 122 | 0 | 0 | nanobody 26 | N.A. | lama glama | N.A. | A | protein | isoform 2b of gtpase kras,aph2 | homo sapiens | 25 | 15 | 0.88 | H_only | train |
9i5e_N | 9i5e | a coiled coil module strategy for high-resolution cryo-em structures of small proteins for drug discovery | yes | structural protein | 2025-01-28 | 2025-11-12 | electron microscopy | 3.77 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | VQLQESGGGLVQAGDSLRLSCAASGRTFSTYPMGWFRQAPGKEREFVAASSSRAYYADSVKGRFTISRNNAKNTVYLQMNSLKPEDTAVYYCVADSSPYYRRYDAAQDYDYWGQGTQVTVSS | N.A. | VQLQESGGGLVQAGDSLRLSCAASGRTFSTYPMGWFRQAPGKEREFVAASSSRAYYADSVKGRFTISRNNAKNTVYLQMNSLKPEDTAVYYCVADSSPYYRRYDAAQDYDYWGQGTQVTVSS | N.A. | 14.288252 | 0 | 122 | 0 | 122 | 0 | 122 | 0 | 0 | nanobody 26 | N.A. | lama glama | N.A. | B | protein | isoform 2b of gtpase kras,aph2 | homo sapiens | 24 | 13 | 0.87 | H_only | train |
9lqu_C | 9lqu | cryo-em structure of the jn241-9-bound state 1a of aplnr homodimer | no | structural protein | 2025-01-28 | 2026-02-04 | electron microscopy | 2.7 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH | IGHV3 | N.A. | C | N.A. | QVQLVESGGGSVQSGGSLTLSCAASGSTYSSHCMGWFRQAPGKEREGVALMTRSRGTSYADSVKGRFTISQDNTKNILYLQMNSLKPEDTAMYYCAAVPRAGIEYSGAYCKWNMKDSGSWGQGTQVTVSS | N.A. | QVQLVESGGGSVQSGGSLTLSCAASGSTYSSHCMGWFRQAPGKEREGVALMTRSRGTSYADSVKGRFTISQDNTKNILYLQMNSLKPEDTAMYYCAAVPRAGIEYSGAYCKWNMKDSGSWGQGTQVTVS | N.A. | 14.376086 | 0 | 130 | 0 | 129 | 0 | 129 | 0 | 0 | jn241-9 | N.A. | synthetic construct | N.A. | A | protein | apelin receptor | homo sapiens | 60 | 22 | 0.92 | H_only | train |
9lqu_D | 9lqu | cryo-em structure of the jn241-9-bound state 1a of aplnr homodimer | no | structural protein | 2025-01-28 | 2026-02-04 | electron microscopy | 2.7 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH | IGHV3 | N.A. | D | N.A. | QVQLVESGGGSVQSGGSLTLSCAASGSTYSSHCMGWFRQAPGKEREGVALMTRSRGTSYADSVKGRFTISQDNTKNILYLQMNSLKPEDTAMYYCAAVPRAGIEYSGAYCKWNMKDSGSWGQGTQVTVSS | N.A. | QVQLVESGGGSVQSGGSLTLSCAASGSTYSSHCMGWFRQAPGKEREGVALMTRSRGTSYADSVKGRFTISQDNTKNILYLQMNSLKPEDTAMYYCAAVPRAGIEYSGAYCKWNMKDSGSWGQGTQVTVS | N.A. | 14.376095 | 0 | 130 | 0 | 129 | 0 | 129 | 0 | 0 | jn241-9 | N.A. | synthetic construct | N.A. | B | protein | apelin receptor | homo sapiens | 61 | 22 | 0.88 | H_only | train |
9lqw_C | 9lqw | cryo-em structure of the jn241-9-bound state 1b of aplnr homodimer | no | structural protein | 2025-01-28 | 2026-02-04 | electron microscopy | 2.7 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH | IGHV3 | N.A. | C | N.A. | QVQLVESGGGSVQSGGSLTLSCAASGSTYSSHCMGWFRQAPGKEREGVALMTRSRGTSYADSVKGRFTISQDNTKNILYLQMNSLKPEDTAMYYCAAVPRAGIEYSGAYCKWNMKDSGSWGQGTQVTVSS | N.A. | QVQLVESGGGSVQSGGSLTLSCAASGSTYSSHCMGWFRQAPGKEREGVALMTRSRGTSYADSVKGRFTISQDNTKNILYLQMNSLKPEDTAMYYCAAVPRAGIEYSGAYCKWNMKDSGSWGQGTQVTVS | N.A. | 14.715671 | 0 | 130 | 0 | 129 | 0 | 129 | 0 | 0 | jn241-9 | N.A. | synthetic construct | N.A. | A | protein | apelin receptor | homo sapiens | 80 | 29 | 0.88 | H_only | train |
9lqw_D | 9lqw | cryo-em structure of the jn241-9-bound state 1b of aplnr homodimer | no | structural protein | 2025-01-28 | 2026-02-04 | electron microscopy | 2.7 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH | IGHV3 | N.A. | D | N.A. | QVQLVESGGGSVQSGGSLTLSCAASGSTYSSHCMGWFRQAPGKEREGVALMTRSRGTSYADSVKGRFTISQDNTKNILYLQMNSLKPEDTAMYYCAAVPRAGIEYSGAYCKWNMKDSGSWGQGTQVTVSS | N.A. | QVQLVESGGGSVQSGGSLTLSCAASGSTYSSHCMGWFRQAPGKEREGVALMTRSRGTSYADSVKGRFTISQDNTKNILYLQMNSLKPEDTAMYYCAAVPRAGIEYSGAYCKWNMKDSGSWGQGTQVTVS | N.A. | 14.716312 | 0 | 130 | 0 | 129 | 0 | 129 | 0 | 0 | jn241-9 | N.A. | synthetic construct | N.A. | B | protein | apelin receptor | homo sapiens | 80 | 29 | 0.88 | H_only | train |
9lqx_C | 9lqx | cryo-em structure of the jn241-9-bound state 1c of aplnr homodimer | no | structural protein | 2025-01-28 | 2026-02-04 | electron microscopy | 2.7 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH | IGHV3 | N.A. | C | N.A. | QVQLVESGGGSVQSGGSLTLSCAASGSTYSSHCMGWFRQAPGKEREGVALMTRSRGTSYADSVKGRFTISQDNTKNILYLQMNSLKPEDTAMYYCAAVPRAGIEYSGAYCKWNMKDSGSWGQGTQVTVSS | N.A. | QVQLVESGGGSVQSGGSLTLSCAASGSTYSSHCMGWFRQAPGKEREGVALMTRSRGTSYADSVKGRFTISQDNTKNILYLQMNSLKPEDTAMYYCAAVPRAGIEYSGAYCKWNMKDSGSWGQGTQVTVS | N.A. | 14.712775 | 0 | 130 | 0 | 129 | 0 | 129 | 0 | 0 | jn241-9 | N.A. | synthetic construct | N.A. | A | protein | apelin receptor | homo sapiens | 81 | 29 | 0.88 | H_only | train |
9lqx_D | 9lqx | cryo-em structure of the jn241-9-bound state 1c of aplnr homodimer | no | structural protein | 2025-01-28 | 2026-02-04 | electron microscopy | 2.7 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH | IGHV3 | N.A. | D | N.A. | QVQLVESGGGSVQSGGSLTLSCAASGSTYSSHCMGWFRQAPGKEREGVALMTRSRGTSYADSVKGRFTISQDNTKNILYLQMNSLKPEDTAMYYCAAVPRAGIEYSGAYCKWNMKDSGSWGQGTQVTVSS | N.A. | QVQLVESGGGSVQSGGSLTLSCAASGSTYSSHCMGWFRQAPGKEREGVALMTRSRGTSYADSVKGRFTISQDNTKNILYLQMNSLKPEDTAMYYCAAVPRAGIEYSGAYCKWNMKDSGSWGQGTQVTVS | N.A. | 14.433905 | 0 | 130 | 0 | 129 | 0 | 129 | 0 | 0 | jn241-9 | N.A. | synthetic construct | N.A. | B | protein | apelin receptor | homo sapiens | 65 | 24 | 0.89 | H_only | train |
9lr1_S | 9lr1 | cryo-em structure of the jn241-9-bound aplnr monomer-gi complex | yes | structural protein | 2025-01-28 | 2026-02-04 | electron microscopy | 2.5 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | scFv | N.A. | N.A. | S | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKGS | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.26604 | 0 | 250 | 0 | 231 | 0 | 246 | 0 | 0 | single fab chain(scfv16) | N.A. | synthetic construct | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 37;23 | 23;10 | 0.92;0.91 | H_only | train |
9lr1_C | 9lr1 | cryo-em structure of the jn241-9-bound aplnr monomer-gi complex | yes | structural protein | 2025-01-28 | 2026-02-04 | electron microscopy | 2.5 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH | IGHV3 | N.A. | C | N.A. | QVQLVESGGGSVQSGGSLTLSCAASGSTYSSHCMGWFRQAPGKEREGVALMTRSRGTSYADSVKGRFTISQDNTKNILYLQMNSLKPEDTAMYYCAAVPRAGIEYSGAYCKWNMKDSGSWGQGTQVTVSS | N.A. | QVQLVESGGGSVQSGGSLTLSCAASGSTYSSHCMGWFRQAPGKEREGVALMTRSRGTSYADSVKGRFTISQDNTKNILYLQMNSLKPEDTAMYYCAAVPRAGIEYSGAYCKWNMKDSGSWGQGTQVTVS | N.A. | 15.279369 | 0 | 130 | 0 | 129 | 0 | 129 | 0 | 0 | jn241-9 | N.A. | synthetic construct | N.A. | R | protein | apelin receptor | homo sapiens | 76 | 29 | 0.91 | H_only | train |
9i5n_B_A | 9i5n | single particle cryo electron microscopy of a fab fragment bound to recombinant human cd40 ligand | no | immune system | 2025-01-28 | 2026-02-25 | electron microscopy | 3.4 | N.A. | N.A. | N.A. | 10.1002/eji.70158 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV5 | B | A | QVQLKQSGPGLVQPSQSLSITCTVSGFSLTGYGVHWVRQSPGKGLEWLGMIWSGGSTDYNAAFISRLSISKDSSKSQVFFKMNSLQANDTAIYYCARSSGNYGEDAMDYWGQGTSVTV | ETTVTQSPASLSMAIGEKVTIRCITSTDIDDDMNWYQQKPGEPPELLISEDNTLRPGVPSRFSSSGYGTDFVFAIENMLPEDVADYFCLQSDNLPFTFGSGTKLEIK | QVQLKQSGPGLVQPSQSLSITCTVSGFSLTGYGVHWVRQSPGKGLEWLGMIWSGGSTDYNAAFISRLSISKDSSKSQVFFKMNSLQANDTAIYYCARSSGNYGEDAMDYWGQGTSVTV | ETTVTQSPASLSMAIGEKVTIRCITSTDIDDDMNWYQQKPGEPPELLISEDNTLRPGVPSRFSSSGYGTDFVFAIENMLPEDVADYFCLQSDNLPFTFGSGTKLEIK | 13.556232 | 13.26964 | 118 | 107 | 118 | 107 | 118 | 107 | 50 | fab20 heavy chain | fab20 light chain | mus musculus | mus musculus | C | protein | cd40 ligand, soluble form | homo sapiens | 35 | 13 | 0.76 | HL | train |
9lrb_N | 9lrb | cryo-em structure of the histamine h1 receptor-gs protein complex | no | membrane protein | 2025-01-30 | 2025-06-11 | electron microscopy | 2.77 | N.A. | N.A. | 40579541 | 10.1038/s42003-025-08363-7 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MGQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSLHHHHHH | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS | N.A. | 13.841139 | 0 | 137 | 0 | 128 | 0 | 128 | 0 | 0 | nanobody 35 | N.A. | unidentified | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;rattus norvegicus | 41;31 | 12;11 | 0.6;0.69 | H_only | train |
9lrd_E | 9lrd | cryo-em structure of the histamine h1 receptor-gi protein complex | no | membrane protein | 2025-01-30 | 2025-06-11 | electron microscopy | 3.23 | N.A. | N.A. | 40579541 | 10.1038/s42003-025-08363-7 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAASSEDLYFQ | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.26059 | 0 | 260 | 0 | 232 | 0 | 246 | 0 | 0 | scfv16 | N.A. | mus musculus | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;rattus norvegicus | 34;21 | 20;8 | 0.91;0.73 | H_only | train |
9lre_E | 9lre | cryo-em structure of the histamine h4 receptor-gi protein complex (overall) | yes | membrane protein | 2025-01-30 | 2025-06-11 | electron microscopy | 2.84 | N.A. | N.A. | 40579541 | 10.1038/s42003-025-08363-7 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAASSEDLYFQ | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.26962 | 0 | 260 | 0 | 232 | 0 | 246 | 0 | 0 | scfv16 | N.A. | mus musculus | N.A. | A;B | protein;protein | guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;rattus norvegicus | 14;27 | 8;12 | 0.89;0.8 | H_only | train |
9lra_H_L | 9lra | killer immunoglobulin receptor kir2dl2 in complex with pan2d fab | no | immune system | 2025-01-30 | 2025-10-15 | x-ray diffraction | 2.6 | 0.252 | 0.22 | 41023081 | 10.1038/s41598-025-18394-z | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | H | L | EVQLQQSGTVLARPGASVKMSCKASGYTFTSYWMHWMKQRPGQGLEWIGTIYPGNSDTNYNQKFKGKAKLTAVTSTNTAYMELSSLTNEDSAVYYCSRPTTATRSSAMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH | QIVLTQSPASMSASLGERVTMTCTASSSVSSSYLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAATYYCHQYHRSPPTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLQQSGTVLARPGASVKMSCKASGYTFTSYWMHWMKQRPGQGLEWIGTIYPGNSDTNYNQKFKGKAKLTAVTSTNTAYMELSSLTNEDSAVYYCSRPTTATRSSAMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | QIVLTQSPASMSASLGERVTMTCTASSSVSSSYLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAATYYCHQYHRSPPTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 22.244125 | 23.192726 | 228 | 215 | 219 | 214 | 223 | 214 | 96 | pan2d fab fragment heavy chain | pan2d fab fragment light chain | homo sapiens | homo sapiens | K | protein | killer cell immunoglobulin-like receptor 2dl2 | homo sapiens | 39 | 14 | 0.7 | HL | train |
9n38_H_L | 9n38 | cryo em structure of lukab (lukgh) toxin from staphylococcus aureus in complex with neutralizing fab stau-15 | no | immune system/toxin | 2025-01-30 | 2026-02-04 | electron microscopy | 3.9 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | QVQLVQSGGGVVQPGRSLRLSCAASGFSFSTYDMNWVRQAPGKGLEWLSIISYDETNKYYADSVKGRFTISRDNSKNTLFLQMNSLKPEDSAVYHCVKVGWTLVGDGVDMWGQGTLVTVSS | AIRMTQSPSSLSASVGDRVTISCRASQGISHYLAWYQQQPGKVPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQKYNGAPFTFGPGTKVDIK | QLVQSGGGVVQPGRSLRLSCAASGFSFSTYDMNWVRQAPGKGLEWLSIISYDETNKYYADSVKGRFTISRDNSKNTLFLQMNSLKPEDSAVYHCVKVGWTLVGDGVDMWGQGTLVTVSS | IRMTQSPSSLSASVGDRVTISCRASQGISHYLAWYQQQPGKVPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDVATYYCQKYNGAPFTFGPGTKVDI | 13.739924 | 13.041225 | 121 | 107 | 119 | 105 | 119 | 105 | 39 | stau-15 heavy chain | stau-15 light chain | homo sapiens | homo sapiens | A | protein | leukocidin-like protein 1 | staphylococcus aureus | 39 | 21 | 0.91 | HL | train |
9lrf_H_L | 9lrf | killer immunoglobulin receptor kir2dl2 in complex with kir2dl2_kir2dl2/3 agonist 61-fab | no | immune system | 2025-01-31 | 2025-10-15 | x-ray diffraction | 2.5 | 0.274 | 0.234 | 41023081 | 10.1038/s41598-025-18394-z | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | H | L | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSFAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARVSGTTGGYYYGMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH | AIRMTQSPSSVSASVGDRVTITCRASQGIGNWLAWYQQKPGRAPKLLISTASSLQSGVPSRFSGGGSGRGFTLTISSLQLEDFATYYCQQSYITPWTFGQGTKVEIKVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSFAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARVSGTTGGYYYGMDVWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | AIRMTQSPSSVSASVGDRVTITCRASQGIGNWLAWYQQKPGRAPKLLISTASSLQSGVPSRFSGGGSGRGFTLTISSLQLEDFATYYCQQSYITPWTFGQGTKVEIKVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 27.61277 | 25.383526 | 230 | 212 | 216 | 210 | 224 | 210 | 44 | kir2dl2_kir2dl2/3 agonist 61 fab fragment heavy chain | kir2dl2_kir2dl2/3 agonist 61 fab fragment light chain | homo sapiens | homo sapiens | K | protein | killer cell immunoglobulin-like receptor 2dl2 | homo sapiens | 39 | 17 | 0.94 | HL | train |
9lrh_H_L | 9lrh | killer immunoglobulin receptor kir2dl2 in complex with kir2dl2_kir2dl2/3 agonist 61-scfv | no | immune system | 2025-01-31 | 2025-10-15 | x-ray diffraction | 3.4 | 0.253 | 0.227 | 41023081 | 10.1038/s41598-025-18394-z | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | H | L | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSFAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARVSGTTGGYYYGMDVWGQGTLVTVSSGGGGSGGGGSGGGGSAIRMTQSPSSVSASVGDRVTITCRASQGIGNWLAWYQQKPGRAPKLLISTASSLQSGVPSRFSGGGSGRGFTLTISSLQLEDFATYYCQQSYITPWTFGQGTKVEIKGALEVLFQ | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSFAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARVSGTTGGYYYGMDVWGQGTLVTVSSGGGGSGGGGSGGGGSAIRMTQSPSSVSASVGDRVTITCRASQGIGNWLAWYQQKPGRAPKLLISTASSLQSGVPSRFSGGGSGRGFTLTISSLQLEDFATYYCQQSYITPWTFGQGTKVEIKGALEVLFQ | QVQLVQSGAEVKKPGSSVKVSCKASGGTFSSFAISWVRQAPGQGLEWMGGIIPIFGTANYAQKFQGRVTITADESTSTAYMELSSLRSEDTAVYYCARVSGTTGGYYYGMDVWGQGTLVTVSS | GGSGGGGSAIRMTQSPSSVSASVGDRVTITCRASQGIGNWLAWYQQKPGRAPKLLISTASSLQSGVPSRFSGGGSGRGFTLTISSLQLEDFATYYCQQSYITPWTFGQGTKVEIKG | 14.071678 | 14.173111 | 253 | 253 | 123 | 116 | 123 | 116 | 43 | kir2dl2_kir2dl2/3 agonist 61 scfv | kir2dl2_kir2dl2/3 agonist 61 scfv | homo sapiens | homo sapiens | K | protein | killer cell immunoglobulin-like receptor 2dl2 | homo sapiens | 49 | 18 | 0.75 | HL | train |
9i6q_H_L | 9i6q | structure of fab-fragment gb11 agains tumour associated carbohydrate antigens. | no | immune system | 2025-01-31 | 2026-02-18 | x-ray diffraction | 1.86 | 0.239 | 0.2 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EVKLEESGGGLVQPGGSMKLSCAASGFTFSDAWMDWVRQSPEKGLEWVAEIGNYAINHATYYAESVKGRFAISRDDSKSSVYLQMNSLRPEDTGIYFCTVRFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCSLSSGVHTFPAVLQSDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIVPRDCGC | DIKMTQSPSSMYASLGERVTFTCRASQDINSYLSWFQQKPGKSPKTLIYRANRLVDGVPSRFSGSGSGQDYSLTISSLEYEDMGIYFCLQYDEFPRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | EVKLEESGGGLVQPGGSMKLSCAASGFTFSDAWMDWVRQSPEKGLEWVAEIGNYAINHATYYAESVKGRFAISRDDSKSSVYLQMNSLRPEDTGIYFCTVRFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | DIKMTQSPSSMYASLGERVTFTCRASQDINSYLSWFQQKPGKSPKTLIYRANRLVDGVPSRFSGSGSGQDYSLTISSLEYEDMGIYFCLQYDEFPRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN | 21.300745 | 23.288164 | 277 | 214 | 217 | 212 | 217 | 212 | 101 | heavy chain | fab fragment variable chain | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9lrs_E | 9lrs | the structure of mrgprx4 with psb-18061 | yes | signaling protein | 2025-02-01 | 2026-02-04 | electron microscopy | 2.83 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAALEVLFQGPHHHHHHHH | N.A. | VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL | N.A. | 17.29927 | 0 | 267 | 0 | 231 | 0 | 246 | 0 | 0 | scfv16 | N.A. | mus musculus | N.A. | B;C | protein;protein | gs-mini-gq chimera;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 | homo sapiens;homo sapiens | 35;19 | 20;8 | 0.87;0.89 | H_only | train |
9n4e_K_M | 9n4e | structure of ag2-g02 fab in complex with influenza h3n8 a/mallard/alberta/362/2017 hemagglutinin | no | viral protein/immune system | 2025-02-02 | 2025-10-08 | electron microscopy | 2.6 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | K | M | VQLVQSGAEMKKPGASVKVSCKASGYTFSAYYIHWVRQAPGQGLEWMGRINTDSGGTNFAQQFEGRVTMTRDTSISTAYMELSSLRSDDTAVYYCARGYDFWLGSYRAGGWFDPWGQGTLVTVSS | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFRGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPQGFTFGPGTKVDIK | VQLVQSGAEMKKPGASVKVSCKASGYTFSAYYIHWVRQAPGQGLEWMGRINTDSGGTNFAQQFEGRVTMTRDTSISTAYMELSSLRSDDTAVYYCARGYDFWLGSYRAGGWFDPWGQGTLVTVSS | IVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFRGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPQGFTFGPGT | 14.626155 | 13.108205 | 125 | 110 | 125 | 104 | 125 | 104 | 45 | variable domain of the heavy chain of fab ag2-g02 | variable domain of the light chain of fab ag2-g02 | homo sapiens | homo sapiens | B;A | protein;protein | hemagglutinin;hemagglutinin | influenza a virus;influenza a virus | 37;18 | 15;12 | 0.79;1.0 | HL | train |
9n4e_Q_P | 9n4e | structure of ag2-g02 fab in complex with influenza h3n8 a/mallard/alberta/362/2017 hemagglutinin | no | viral protein/immune system | 2025-02-02 | 2025-10-08 | electron microscopy | 2.6 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | Q | P | VQLVQSGAEMKKPGASVKVSCKASGYTFSAYYIHWVRQAPGQGLEWMGRINTDSGGTNFAQQFEGRVTMTRDTSISTAYMELSSLRSDDTAVYYCARGYDFWLGSYRAGGWFDPWGQGTLVTVSS | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFRGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPQGFTFGPGTKVDIK | VQLVQSGAEMKKPGASVKVSCKASGYTFSAYYIHWVRQAPGQGLEWMGRINTDSGGTNFAQQFEGRVTMTRDTSISTAYMELSSLRSDDTAVYYCARGYDFWLGSYRAGGWFDPWGQGTLVTVSS | IVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFRGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPQGFTFGPGT | 14.624402 | 13.119927 | 125 | 110 | 125 | 104 | 125 | 104 | 44 | variable domain of the heavy chain of fab ag2-g02 | variable domain of the light chain of fab ag2-g02 | homo sapiens | homo sapiens | D;C | protein;protein | hemagglutinin;hemagglutinin | influenza a virus;influenza a virus | 37;15 | 16;10 | 0.8;1.0 | HL | train |
9n4e_O_R | 9n4e | structure of ag2-g02 fab in complex with influenza h3n8 a/mallard/alberta/362/2017 hemagglutinin | no | viral protein/immune system | 2025-02-02 | 2025-10-08 | electron microscopy | 2.6 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | O | R | VQLVQSGAEMKKPGASVKVSCKASGYTFSAYYIHWVRQAPGQGLEWMGRINTDSGGTNFAQQFEGRVTMTRDTSISTAYMELSSLRSDDTAVYYCARGYDFWLGSYRAGGWFDPWGQGTLVTVSS | EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFRGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPQGFTFGPGTKVDIK | VQLVQSGAEMKKPGASVKVSCKASGYTFSAYYIHWVRQAPGQGLEWMGRINTDSGGTNFAQQFEGRVTMTRDTSISTAYMELSSLRSDDTAVYYCARGYDFWLGSYRAGGWFDPWGQGTLVTVSS | IVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFRGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPQGFTFGPGT | 14.627392 | 13.134595 | 125 | 110 | 125 | 104 | 125 | 104 | 49 | variable domain of the heavy chain of fab ag2-g02 | variable domain of the light chain of fab ag2-g02 | homo sapiens | homo sapiens | F;E | protein;protein | hemagglutinin;hemagglutinin | influenza a virus;influenza a virus | 39;18 | 17;12 | 0.81;1.0 | HL | train |
9lsh_D_E | 9lsh | cryo-em structure of the wild-type diabody complex (cits-diabody #1-tlr3) | no | structural protein/immune system | 2025-02-04 | 2025-03-12 | electron microscopy | 3.8 | N.A. | N.A. | 40169000 | 10.1016/j.str.2025.03.006 | 0 | auth_asym_id | VHVL:VHVL | N.A. | N.A. | D | E | EVQLVESGGGLVQPGGSLRLSCAASGFTFRNSAMHWVRQAPGKGLEWVSSIWYSGSNTYYADSVKGRFTISRDNSKNTLYLQMNSLTAEDTAVYYCARFAGGWGAYDVWGQGTLVTVSSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQSIGLYLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQGNTLSYTFGQGTKVEIKPWLVPRGSHHHHHHSGGGGSGGGGS | GGGGSGGGGLVPRGSPGEVQLVQSGAEVKKPGESLKISCKGSGYSFTNYWVGWVRQMPGKGLEWMGFIDPSDSYTNYADSVKGRFTISADKSISTAYLQMNSLTASDTAMYYCARELYQGYMDTFDSWGQGTLVTVSSGGGGSDIVLTQSPATLSLSPGERATLSCRASQSVSSNYLAWYQQKPGQAPRLLIYDSSSRATGVPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYSDISPTFGQGTKVEIKSGRLVPRGSHHHHHH | EVQLVESGGGLVQPGGSLRLSCAASGFTFRNSAMHWVRQAPGKGLEWVSSIWYSGSNTYYADSVKGRFTISRDNSKNTLYLQMNSLTAEDTAVYYCARFAGGWGAYDVWGQGTLVTVSSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQSIGLYLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQGNTLSYTFGQGTKVE | EVQLVQSGAEVKKPGESLKISCKGSGYSFTNYWVGWVRQMPGKGLEWMGFIDPSDSYTNYADSVKGRFTISADKSISTAYLQMNSLTASDTAMYYCARELYQGYMDTFDSWGQGTLVTVSSGGGGSDIVLTQSPATLSLSPGERATLSCRASQSVSSNYLAWYQQKPGQAPRLLIYDSSSRATGVPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYSDISPTFGQGTKVEI | 27.036932 | 29.152372 | 256 | 266 | 225 | 229 | 229 | 233 | 84 | diabody (cits vh-tlr3 vl) | diabody (tlr3 vh-cits vl) | synthetic construct | synthetic construct | A;B;C | protein;protein;protein | citrate/sodium symporter;citrate/sodium symporter;toll-like receptor 3 | klebsiella pneumoniae;klebsiella pneumoniae;homo sapiens | 32;30;60 | 11;13;17 | 0.55;0.87;0.65 | HL | train |
9lsj_D_E | 9lsj | cryo-em structure of the g15c-r66c and t83c-t83c diabody complex (cits-diabody #7-tlr3) | no | structural protein/immune system | 2025-02-04 | 2025-03-12 | electron microscopy | 3.1 | N.A. | N.A. | 40169000 | 10.1016/j.str.2025.03.006 | 0 | auth_asym_id | VHVL:VHVL | N.A. | N.A. | D | E | EVQLVESGGGLVQPCGSLRLSCAASGFTFRNSAMHWVRQAPGKGLEWVSSIWYSGSNTYYADSVKGRFTISRDNSKNTLYLQMNSLCAEDTAVYYCARFAGGWGAYDVWGQGTLVTVSSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQSIGLYLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQGNTLSYTFGQGTKVEIKPWLVPRGSHHHHHHSGGGGSGGGGS | GGGGSGGGGLVPRGSPGEVQLVQSGAEVKKPGESLKISCKGSGYSFTNYWVGWVRQMPGKGLEWMGFIDPSDSYTNYADSVKGCFTISADKSISTAYLQMNSLCASDTAMYYCARELYQGYMDTFDSWGQGTLVTVSSGGGGSDIVLTQSPATLSLSPGERATLSCRASQSVSSNYLAWYQQKPGQAPRLLIYDSSSRATGVPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYSDISPTFGQGTKVEIKSGRLVPRGSHHHHHH | EVQLVESGGGLVQPCGSLRLSCAASGFTFRNSAMHWVRQAPGKGLEWVSSIWYSGSNTYYADSVKGRFTISRDNSKNTLYLQMNSLCAEDTAVYYCARFAGGWGAYDVWGQGTLVTVSSGGGGSDIQMTQSPSSLSASVGDRVTITCRASQSIGLYLAWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQGNTLSYTFGQGTKVE | EVQLVQSGAEVKKPGESLKISCKGSGYSFTNYWVGWVRQMPGKGLEWMGFIDPSDSYTNYADSVKGCFTISADKSISTAYLQMNSLCASDTAMYYCARELYQGYMDTFDSWGQGTLVTVSSGGGGSDIVLTQSPATLSLSPGERATLSCRASQSVSSNYLAWYQQKPGQAPRLLIYDSSSRATGVPARFSGSGSGTDFTLTISSLEPEDFAVYYCHQYSDISPTFGQGTKVEI | 28.10558 | 28.387646 | 256 | 266 | 229 | 233 | 229 | 233 | 114 | diabody (cits vh-tlr3 vl) | diabody (tlr3 vh-cits vl) | synthetic construct | synthetic construct | A;B;C | protein;protein;protein | citrate/sodium symporter;citrate/sodium symporter;toll-like receptor 3 | klebsiella pneumoniae;klebsiella pneumoniae;homo sapiens | 42;34;71 | 15;13;23 | 0.6;0.87;0.66 | HL | train |
9n5h_B_C | 9n5h | endogenous pfs230d1-6 in complex with rupa-97, lmiv230-01, and 2a2 fab domains | no | immune system | 2025-02-04 | 2025-10-15 | electron microscopy | 3.6 | N.A. | N.A. | 39990443 | 10.1101/2025.02.14.638310 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | B | C | EVQLQQSGPELEKPGASVKISCKASGYSITDYNMNWVKLSNGKSLEWIGNIDPSHGGTTYNQKFKGKATLTVDKSSSTAYMQLKSLTSEDSAVYHCARSTLYGNSAMDCWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | SIVMTQTPKFLLVPAGDRVTITCKASQSVNNDVTWYQQKPGQSPKLLIYYASNRYTGVPDRFTGSGYGTDFTFTISTVQAEDLAVYFCQQDYSSPLTFGAGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLQQSGPELEKPGASVKISCKASGYSITDYNMNWVKLSNGKSLEWIGNIDPSHGGTTYNQKFKGKATLTVDKSSSTAYMQLKSLTSEDSAVYHCARSTLYGNSAMDCWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | SIVMTQTPKFLLVPAGDRVTITCKASQSVNNDVTWYQQKPGQSPKLLIYYASNRYTGVPDRFTGSGYGTDFTFTISTVQAEDLAVYFCQQDYSSPLTFGAGTKLELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 21.582712 | 23.858541 | 223 | 214 | 221 | 212 | 221 | 212 | 100 | 2a2 heavy chain | 2a2 kappa chain | mus musculus | mus musculus | A | protein | gametocyte surface protein p230 | plasmodium falciparum 3d7 | 43 | 18 | 0.75 | HL | train |
9n5h_D_E | 9n5h | endogenous pfs230d1-6 in complex with rupa-97, lmiv230-01, and 2a2 fab domains | no | immune system | 2025-02-04 | 2025-10-15 | electron microscopy | 3.6 | N.A. | N.A. | 39990443 | 10.1101/2025.02.14.638310 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | D | E | QVQLVQSGAEVKKPGSSVKVSCKVSGGTFNTYAIIWVRQAPGQGLEWMGAIIPFQDRGQYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCAKESGRAVADRWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIVMTQSPASLALSLGERATLYCRASHSISSWLAWYQQKPGKAPKLLIYKASTLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYKSYPWTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | QVQLVQSGAEVKKPGSSVKVSCKVSGGTFNTYAIIWVRQAPGQGLEWMGAIIPFQDRGQYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCAKESGRAVADRWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIVMTQSPASLALSLGERATLYCRASHSISSWLAWYQQKPGKAPKLLIYKASTLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYKSYPWTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 22.844172 | 23.423203 | 221 | 212 | 219 | 212 | 219 | 212 | 104 | lmiv230-01 heavy chain | lmiv230-01 kappa chain | homo sapiens | homo sapiens | A | protein | gametocyte surface protein p230 | plasmodium falciparum 3d7 | 55 | 21 | 0.72 | HL | train |
9n5h_H_L | 9n5h | endogenous pfs230d1-6 in complex with rupa-97, lmiv230-01, and 2a2 fab domains | no | immune system | 2025-02-04 | 2025-10-15 | electron microscopy | 3.6 | N.A. | N.A. | 39990443 | 10.1101/2025.02.14.638310 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | H | L | EVQLVENGGGLVKPGGSLRLSCAASGFTISSYGMNWVRQAPGKGLEWVSSISSGSTYKYYSDSVKGRFTISRDNAKNSLYLQMNTLRAEDTAVYYCARAPEPGLTWFGEWGDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPVTLSLSPGERATLSCRASLSISSSLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSIWPPITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVENGGGLVKPGGSLRLSCAASGFTISSYGMNWVRQAPGKGLEWVSSISSGSTYKYYSDSVKGRFTISRDNAKNSLYLQMNTLRAEDTAVYYCARAPEPGLTWFGEWGDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | EIVLTQSPVTLSLSPGERATLSCRASLSISSSLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYYCQQRSIWPPITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG | 23.588879 | 22.730959 | 227 | 215 | 225 | 213 | 225 | 213 | 106 | rupa-97 heavy chain | rupa-97 kappa chain | homo sapiens | homo sapiens | A | protein | gametocyte surface protein p230 | plasmodium falciparum 3d7 | 54 | 19 | 0.7 | HL | train |
9n5o_H_L | 9n5o | endogenous pfs230d7-8 in complex with 18f25 | no | immune system | 2025-02-04 | 2025-10-15 | electron microscopy | 4.32 | N.A. | N.A. | 39990443 | 10.1101/2025.02.14.638310 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV1 | H | L | QVQLQQSGAELARPGASVKLSCKASGYTFTNYWMQWVKQRPGQGLEWFGAIYPGDGDTRYTQKFKGKATLTADKSSSTAYMQLSSLASEDSAVYYCARSLYLGAMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIVMTQSHKFMSTSVGDRVSITCKASQDVTNDVAWYQQKPGQSPKLLIYSASYRYTGVPDRFTGSGSGTDFIFTISSVQAEDLAVYYCQQHYSAPPTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLQQSGAELARPGASVKLSCKASGYTFTNYWMQWVKQRPGQGLEWFGAIYPGDGDTRYTQKFKGKATLTADKSSSTAYMQLSSLASEDSAVYYCARSLYLGAMDYWGQGTSVTVSS | DIVMTQSHKFMSTSVGDRVSITCKASQDVTNDVAWYQQKPGQSPKLLIYSASYRYTGVPDRFTGSGSGTDFIFTISSVQAEDLAVYYCQQHYSAPPTFGGGTKLE | 13.537951 | 12.897521 | 221 | 214 | 118 | 105 | 118 | 105 | 40 | 18f25 heavy chain | 18f25 kappa chain | mus musculus | mus musculus | B | protein | gametocyte surface protein p230 | plasmodium falciparum 3d7 | 26 | 12 | 0.8 | HL | train |
9n5y_I_L | 9n5y | hemagglutinin ca09 homotrimer bound to ael31302/ael31311 fab | no | immune system/viral protein | 2025-02-04 | 2025-11-12 | electron microscopy | 4.1 | N.A. | N.A. | 41143207 | 10.1038/s42256-025-01131-6 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV4 | I | L | MGWSCIILFLVATATGVHSQVQLVQSGGGVVPPGRSLRLSCAASGFTFSTYGMHWVRQAPGKGLEWVAVISYDGNYKYYADSVRGRFTISRDNSKNTLNLDMNSLRTEDTALYYCAKDSQLRSLLYFDWLSQGYFDHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | MGWSCIILFLVATATGVHSDIVMTQSPDSLAVSLGERATINCRSSQSVSSNNKNFLAWYQEKPGQPPKVLIYWASARESGVPDRFSGSGSGTDFTLTISGLQAEDVAVYYCQQHYRTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGGGVVPPGRSLRLSCAASGFTFSTYGMHWVRQAPGKGLEWVAVISYDGNYKYYADSVRGRFTISRDNSKNTLNLDMNSLRTEDTALYYCAKDSQLRSLLYFDWLSQGYFDHWGQGTLVTVSS | DIVMTQSPDSLAVSLGERATINCRSSQSVSSNNKNFLAWYQEKPGQPPKVLIYWASARESGVPDRFSGSGSGTDFTLTISGLQAEDVAVYYCQQHYRTPPTFGQGTKVEIK | 14.309778 | 13.59082 | 251 | 237 | 129 | 111 | 129 | 111 | 47 | fab heavy antibody ael31311 | fab light chain antibody ael31302 | homo sapiens | homo sapiens | A;B | protein;protein | hemagglutinin;hemagglutinin | influenza a virus (a/california/01/2009(h1n1));influenza a virus (a/california/01/2009(h1n1)) | 16;30 | 8;14 | 0.89;1.0 | HL | train |
9n5y_P_O | 9n5y | hemagglutinin ca09 homotrimer bound to ael31302/ael31311 fab | no | immune system/viral protein | 2025-02-04 | 2025-11-12 | electron microscopy | 4.1 | N.A. | N.A. | 41143207 | 10.1038/s42256-025-01131-6 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV4 | P | O | MGWSCIILFLVATATGVHSQVQLVQSGGGVVPPGRSLRLSCAASGFTFSTYGMHWVRQAPGKGLEWVAVISYDGNYKYYADSVRGRFTISRDNSKNTLNLDMNSLRTEDTALYYCAKDSQLRSLLYFDWLSQGYFDHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | MGWSCIILFLVATATGVHSDIVMTQSPDSLAVSLGERATINCRSSQSVSSNNKNFLAWYQEKPGQPPKVLIYWASARESGVPDRFSGSGSGTDFTLTISGLQAEDVAVYYCQQHYRTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGGGVVPPGRSLRLSCAASGFTFSTYGMHWVRQAPGKGLEWVAVISYDGNYKYYADSVRGRFTISRDNSKNTLNLDMNSLRTEDTALYYCAKDSQLRSLLYFDWLSQGYFDHWGQGTLVTVSS | DIVMTQSPDSLAVSLGERATINCRSSQSVSSNNKNFLAWYQEKPGQPPKVLIYWASARESGVPDRFSGSGSGTDFTLTISGLQAEDVAVYYCQQHYRTPPTFGQGTKVEIK | 14.399526 | 13.575469 | 251 | 237 | 129 | 111 | 129 | 111 | 46 | fab heavy antibody ael31311 | fab light chain antibody ael31302 | homo sapiens | homo sapiens | C;D | protein;protein | hemagglutinin;hemagglutinin | influenza a virus (a/california/01/2009(h1n1));influenza a virus (a/california/01/2009(h1n1)) | 17;30 | 7;14 | 0.88;1.0 | HL | train |
9n5y_J_M | 9n5y | hemagglutinin ca09 homotrimer bound to ael31302/ael31311 fab | no | immune system/viral protein | 2025-02-04 | 2025-11-12 | electron microscopy | 4.1 | N.A. | N.A. | 41143207 | 10.1038/s42256-025-01131-6 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV4 | J | M | MGWSCIILFLVATATGVHSQVQLVQSGGGVVPPGRSLRLSCAASGFTFSTYGMHWVRQAPGKGLEWVAVISYDGNYKYYADSVRGRFTISRDNSKNTLNLDMNSLRTEDTALYYCAKDSQLRSLLYFDWLSQGYFDHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | MGWSCIILFLVATATGVHSDIVMTQSPDSLAVSLGERATINCRSSQSVSSNNKNFLAWYQEKPGQPPKVLIYWASARESGVPDRFSGSGSGTDFTLTISGLQAEDVAVYYCQQHYRTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVQLVQSGGGVVPPGRSLRLSCAASGFTFSTYGMHWVRQAPGKGLEWVAVISYDGNYKYYADSVRGRFTISRDNSKNTLNLDMNSLRTEDTALYYCAKDSQLRSLLYFDWLSQGYFDHWGQGTLVTVSS | DIVMTQSPDSLAVSLGERATINCRSSQSVSSNNKNFLAWYQEKPGQPPKVLIYWASARESGVPDRFSGSGSGTDFTLTISGLQAEDVAVYYCQQHYRTPPTFGQGTKVEIK | 14.320627 | 13.656255 | 251 | 237 | 129 | 111 | 129 | 111 | 46 | fab heavy antibody ael31311 | fab light chain antibody ael31302 | homo sapiens | homo sapiens | E;F | protein;protein | hemagglutinin;hemagglutinin | influenza a virus (a/california/01/2009(h1n1));influenza a virus (a/california/01/2009(h1n1)) | 17;32 | 8;14 | 0.89;1.0 | HL | train |
9n5z_A_B | 9n5z | hemagglutinin ca09 homotrimer bound to amb38310/amb38599 fab | no | immune system/viral protein | 2025-02-04 | 2025-11-12 | electron microscopy | 3.2 | N.A. | N.A. | 41143207 | 10.1038/s42256-025-01131-6 | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV3 | A | B | EVQLLESGGGLVQPGGSLRLSCAASGFTFTHFAMTWVRQAPGKGLEWVSTIDGSGGGTYSADFVKGRFTVSRDNSKNTLFLQMNSLRAEDTALYYCAKVSPGMVDDPHLGGAFHIWGQGTMVTVSS | SYELTQPPSVSVAPGQTATITCGGNNIGLKTVHWCQQKPGQAPVVVVYDNNDRPSGIPERFSGSNSWNTATLTITGVEAGDEADYYCQVWDSGSHQVVFGGGTKLTFL | EVQLLESGGGLVQPGGSLRLSCAASGFTFTHFAMTWVRQAPGKGLEWVSTIDGSGGGTYSADFVKGRFTVSRDNSKNTLFLQMNSLRAEDTALYYCAKVSPGMVDDPHLGGAFHIWGQGTMVTVSS | SYELTQPPSVSVAPGQTATITCGGNNIGLKTVHWCQQKPGQAPVVVVYDNNDRPSGIPERFSGSNSWNTATLTITGVEAGDEADYYCQVWDSGSHQVVFGGGTKLTFL | 14.065946 | 13.333902 | 126 | 108 | 126 | 108 | 126 | 108 | 47 | heavy chain antibody fab amb38599 | light chain antibody fab amb38310 | homo sapiens | homo sapiens | C | protein | hemagglutinin | influenza a virus (a/california/01/2009(h1n1)) | 52 | 19 | 0.73 | HL | train |
9n6u_H_L | 9n6u | crystal structure of 18f25 malarial antibody | no | immune system | 2025-02-05 | 2025-10-15 | x-ray diffraction | 1.6 | 0.214 | 0.188 | 41072404 | 10.1016/j.immuni.2025.09.014 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV1 | H | L | QVQLQQSGAELARPGASVKLSCKASGYTFTNYWMQWVKQRPGQGLEWFGAIYPGDGDTRYTQKFKGKATLTADKSSSTAYMQLSSLASEDSAVYYCARSLYLGAMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIVMTQSHKFMSTSVGDRVSITCKASQDVTNDVAWYQQKPGQSPKLLIYSASYRYTGVPDRFTGSGSGTDFIFTISSVQAEDLAVYYCQQHYSAPPTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VQLQQSGAELARPGASVKLSCKASGYTFTNYWMQWVKQRPGQGLEWFGAIYPGDGDTRYTQKFKGKATLTADKSSSTAYMQLSSLASEDSAVYYCARSLYLGAMDYWGQGTSVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | DIVMTQSHKFMSTSVGDRVSITCKASQDVTNDVAWYQQKPGQSPKLLIYSASYRYTGVPDRFTGSGSGTDFIFTISSVQAEDLAVYYCQQHYSAPPTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 21.541468 | 23.578056 | 221 | 214 | 219 | 213 | 219 | 213 | 97 | 18f25 heavy chain | 18f25 kappa chain | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9n6e_A_B | 9n6e | l9-targeting immunogen bound to three copies of l9 fab | no | immune system/de novo protein | 2025-02-05 | 2025-12-10 | electron microscopy | 3.6 | N.A. | N.A. | 41337490 | 10.1073/pnas.2512358122 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | A | B | QVKLVESGGGVVQPGRSLRLSCEASGFIFSTYGMHWVRQAPGKGLEWVAVIWFDGSNIYYADSVKGRFTISRDNSKNTVFMQMDSLRAEDTAVYYCHRNFYDGSGPFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH | DIQMTQSPSTLSASVGDRVTITCRASQFISRWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSETHFTLTISSLQPDDVATYYCQEYTSYGRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | VKLVESGGGVVQPGRSLRLSCEASGFIFSTYGMHWVRQAPGKGLEWVAVIWFDGSNIYYADSVKGRFTISRDNSKNTVFMQMDSLRAEDTAVYYCHRNFYDGSGPFDYWGQGTLVTV | IQMTQSPSTLSASVGDRVTITCRASQFISRWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSETHFTLTISSLQPDDVATYYCQEYTSYGRTFGQGTKVEIK | 14.089235 | 13.401122 | 227 | 214 | 117 | 106 | 117 | 106 | 39 | l9 fab heavy chain | l9 fab light chain | homo sapiens | homo sapiens | I | protein | l9-targeting immunogen | plasmodium falciparum | 39 | 18 | 0.82 | HL | train |
9n6e_C_D | 9n6e | l9-targeting immunogen bound to three copies of l9 fab | no | immune system/de novo protein | 2025-02-05 | 2025-12-10 | electron microscopy | 3.6 | N.A. | N.A. | 41337490 | 10.1073/pnas.2512358122 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | C | D | QVKLVESGGGVVQPGRSLRLSCEASGFIFSTYGMHWVRQAPGKGLEWVAVIWFDGSNIYYADSVKGRFTISRDNSKNTVFMQMDSLRAEDTAVYYCHRNFYDGSGPFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH | DIQMTQSPSTLSASVGDRVTITCRASQFISRWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSETHFTLTISSLQPDDVATYYCQEYTSYGRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVKLVESGGGVVQPGRSLRLSCEASGFIFSTYGMHWVRQAPGKGLEWVAVIWFDGSNIYYADSVKGRFTISRDNSKNTVFMQMDSLRAEDTAVYYCHRNFYDGSGPFDYWGQGTLVTVS | DIQMTQSPSTLSASVGDRVTITCRASQFISRWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSETHFTLTISSLQPDDVATYYCQEYTSYGRTFGQGTKVEI | 14.207055 | 13.389636 | 227 | 214 | 119 | 106 | 119 | 106 | 44 | l9 fab heavy chain | l9 fab light chain | homo sapiens | homo sapiens | I | protein | l9-targeting immunogen | plasmodium falciparum | 33 | 19 | 0.9 | HL | train |
9n6e_H_L | 9n6e | l9-targeting immunogen bound to three copies of l9 fab | no | immune system/de novo protein | 2025-02-05 | 2025-12-10 | electron microscopy | 3.6 | N.A. | N.A. | 41337490 | 10.1073/pnas.2512358122 | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV1 | H | L | QVKLVESGGGVVQPGRSLRLSCEASGFIFSTYGMHWVRQAPGKGLEWVAVIWFDGSNIYYADSVKGRFTISRDNSKNTVFMQMDSLRAEDTAVYYCHRNFYDGSGPFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH | DIQMTQSPSTLSASVGDRVTITCRASQFISRWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSETHFTLTISSLQPDDVATYYCQEYTSYGRTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QVKLVESGGGVVQPGRSLRLSCEASGFIFSTYGMHWVRQAPGKGLEWVAVIWFDGSNIYYADSVKGRFTISRDNSKNTVFMQMDSLRAEDTAVYYCHRNFYDGSGPFDYWGQGTLVTVS | DIQMTQSPSTLSASVGDRVTITCRASQFISRWLAWYQQKPGKAPKLLIYKASSLESGVPSRFSGSGSETHFTLTISSLQPDDVATYYCQEYTSYGRTFGQGTKVEIK | 14.215788 | 13.471723 | 227 | 214 | 119 | 107 | 119 | 107 | 43 | l9 fab heavy chain | l9 fab light chain | homo sapiens | homo sapiens | I | protein | l9-targeting immunogen | plasmodium falciparum | 37 | 18 | 0.9 | HL | train |
9lsz_H_L | 9lsz | inward-open structure of human b0at1 | no | transport protein | 2025-02-05 | 2026-02-18 | electron microscopy | 3.11 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV4 | H | L | GGSSRSSLEVQLQQSGPELVKPGASVKISCKASGYTFTDYYINWVKQRPGQGLEWIGWIYPRSGGTKYIEKFKGKATLTVDTSSSTAYMQLNSLTSEDSAVYFCARFYYSYNEDYYALDYWSQGTSVTVSSAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSAL... | AQAAELDIVMTQSPSSLVVSAGEKVTMTCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSSYLLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC | VQLQQSGPELVKPGASVKISCKASGYTFTDYYINWVKQRPGQGLEWIGWIYPRSGGTKYIEKFKGKATLTVDTSSSTAYMQLNSLTSEDSAVYFCARFYYSYNEDYYALDYWSQGTSVTV | DIVMTQSPSSLVVSAGEKVTMTCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSSYLLTFGAGTKLE | 14.035399 | 13.492663 | 335 | 225 | 120 | 110 | 120 | 110 | 45 | antibody fab heavy chain | antibody fab light chain | mus musculus | mus musculus | A | protein | sodium-dependent neutral amino acid transporter b(0)at1 | homo sapiens | 35 | 17 | 0.85 | HL | train |
9n7m_A_B | 9n7m | designed anti-osm fab | no | immune system | 2025-02-06 | 2026-02-11 | x-ray diffraction | 2.15 | 0.242 | 0.21 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | A | B | EVQLVESGGGLVQPGGSLRLSCAASGFTFNIYSMNWVRQAPGKGLEWISYISSGSNTIYYADSVKGRFTISRDNAENSLYLQMNSLRDEDTAVYYCARSGLRYFDWLSYFDIWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | EIVLTQSPGTLSLSPGERATLSCRASQSVGSSYLAWYQQRPGQAPRLLIHGASSRATGIPDRFSGSGSGTDFTLTISGLEPEDVAVYYCQQYGSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFTFNIYSMNWVRQAPGKGLEWISYISSGSNTIYYADSVKGRFTISRDNAENSLYLQMNSLRDEDTAVYYCARSGLRYFDWLSYFDIWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGERATLSCRASQSVGSSYLAWYQQRPGQAPRLLIHGASSRATGIPDRFSGSGSGTDFTLTISGLEPEDVAVYYCQQYGSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 21.276566 | 23.552908 | 227 | 215 | 220 | 215 | 226 | 215 | 91 | designed fab heavy chain | designed fab light chain | rattus norvegicus | rattus norvegicus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9n7m_H_L | 9n7m | designed anti-osm fab | no | immune system | 2025-02-06 | 2026-02-11 | x-ray diffraction | 2.15 | 0.242 | 0.21 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | H | L | EVQLVESGGGLVQPGGSLRLSCAASGFTFNIYSMNWVRQAPGKGLEWISYISSGSNTIYYADSVKGRFTISRDNAENSLYLQMNSLRDEDTAVYYCARSGLRYFDWLSYFDIWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | EIVLTQSPGTLSLSPGERATLSCRASQSVGSSYLAWYQQRPGQAPRLLIHGASSRATGIPDRFSGSGSGTDFTLTISGLEPEDVAVYYCQQYGSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFTFNIYSMNWVRQAPGKGLEWISYISSGSNTIYYADSVKGRFTISRDNAENSLYLQMNSLRDEDTAVYYCARSGLRYFDWLSYFDIWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | EIVLTQSPGTLSLSPGERATLSCRASQSVGSSYLAWYQQRPGQAPRLLIHGASSRATGIPDRFSGSGSGTDFTLTISGLEPEDVAVYYCQQYGSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 21.357195 | 23.352278 | 227 | 215 | 219 | 215 | 225 | 215 | 96 | designed fab heavy chain | designed fab light chain | rattus norvegicus | rattus norvegicus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9n7o_H_L | 9n7o | designed anti-osm fab | no | immune system | 2025-02-06 | 2026-02-11 | x-ray diffraction | 1.48 | 0.205 | 0.172 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | H | L | EVQLVESGGGLVQPGGSLRLSCAASGFTFTIYSMNWVRQAPGKGLEWISYISSGSNTIYYADSVKGRFTISRDNAKNSLYLQMNSLRDEDTAVYYCARSSLRYFDWLSYFDYWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | EIVLTQSPGTLSLSPGERATLSCRASQSVGSSYLAWYQQRPGQAPRLLIHGASSRATGIPDRFSGSGSGTDFTLTISGLEPEDVAVYYCQQYGSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFTFTIYSMNWVRQAPGKGLEWISYISSGSNTIYYADSVKGRFTISRDNAKNSLYLQMNSLRDEDTAVYYCARSSLRYFDWLSYFDYWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | EIVLTQSPGTLSLSPGERATLSCRASQSVGSSYLAWYQQRPGQAPRLLIHGASSRATGIPDRFSGSGSGTDFTLTISGLEPEDVAVYYCQQYGSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 21.215937 | 23.323517 | 227 | 215 | 227 | 215 | 227 | 215 | 105 | designed fab heavy chain | designed fab light chain | rattus norvegicus | rattus norvegicus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9i9h_A_B | 9i9h | structure of fab-fragment gb11 in complex with sialyl lewis a | no | immune system | 2025-02-06 | 2026-02-18 | x-ray diffraction | 2.96 | 0.248 | 0.21 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | A | B | EVKLEESGGGLVQPGGSMKLSCAASGFTFSDAWMDWVRQSPEKGLEWVAEIGNYAINHATYYAESVKGRFAISRDDSKSSVYLQMNSLRPEDTGIYFCTVRFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | DIKMTQSPSSMYASLGERVTFTCRASQDINSYLSWFQQKPGKSPKTLIYRANRLVDGVPSRFSGSGSGQDYSLTISSLEYEDMGIYFCLQYDEFPRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN | EVKLEESGGGLVQPGGSMKLSCAASGFTFSDAWMDWVRQSPEKGLEWVAEIGNYAINHATYYAESVKGRFAISRDDSKSSVYLQMNSLRPEDTGIYFCTVRFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | DIKMTQSPSSMYASLGERVTFTCRASQDINSYLSWFQQKPGKSPKTLIYRANRLVDGVPSRFSGSGSGQDYSLTISSLEYEDMGIYFCLQYDEFPRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN | 21.29035 | 23.198175 | 217 | 212 | 217 | 212 | 217 | 212 | 97 | igg antibody fab fragment | igg antibody fab fragment | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9i9h_C_D | 9i9h | structure of fab-fragment gb11 in complex with sialyl lewis a | no | immune system | 2025-02-06 | 2026-02-18 | x-ray diffraction | 2.96 | 0.248 | 0.21 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | C | D | EVKLEESGGGLVQPGGSMKLSCAASGFTFSDAWMDWVRQSPEKGLEWVAEIGNYAINHATYYAESVKGRFAISRDDSKSSVYLQMNSLRPEDTGIYFCTVRFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | DIKMTQSPSSMYASLGERVTFTCRASQDINSYLSWFQQKPGKSPKTLIYRANRLVDGVPSRFSGSGSGQDYSLTISSLEYEDMGIYFCLQYDEFPRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN | EVKLEESGGGLVQPGGSMKLSCAASGFTFSDAWMDWVRQSPEKGLEWVAEIGNYAINHATYYAESVKGRFAISRDDSKSSVYLQMNSLRPEDTGIYFCTVRFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | DIKMTQSPSSMYASLGERVTFTCRASQDINSYLSWFQQKPGKSPKTLIYRANRLVDGVPSRFSGSGSGQDYSLTISSLEYEDMGIYFCLQYDEFPRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN | 21.276056 | 23.180607 | 217 | 212 | 217 | 212 | 217 | 212 | 94 | igg antibody fab fragment | igg antibody fab fragment | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9i9h_E_F | 9i9h | structure of fab-fragment gb11 in complex with sialyl lewis a | no | immune system | 2025-02-06 | 2026-02-18 | x-ray diffraction | 2.96 | 0.248 | 0.21 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | E | F | EVKLEESGGGLVQPGGSMKLSCAASGFTFSDAWMDWVRQSPEKGLEWVAEIGNYAINHATYYAESVKGRFAISRDDSKSSVYLQMNSLRPEDTGIYFCTVRFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | DIKMTQSPSSMYASLGERVTFTCRASQDINSYLSWFQQKPGKSPKTLIYRANRLVDGVPSRFSGSGSGQDYSLTISSLEYEDMGIYFCLQYDEFPRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN | EVKLEESGGGLVQPGGSMKLSCAASGFTFSDAWMDWVRQSPEKGLEWVAEIGNYAINHATYYAESVKGRFAISRDDSKSSVYLQMNSLRPEDTGIYFCTVRFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | DIKMTQSPSSMYASLGERVTFTCRASQDINSYLSWFQQKPGKSPKTLIYRANRLVDGVPSRFSGSGSGQDYSLTISSLEYEDMGIYFCLQYDEFPRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN | 21.535606 | 23.09171 | 217 | 212 | 217 | 212 | 217 | 212 | 97 | igg antibody fab fragment | igg antibody fab fragment | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9i9h_H_L | 9i9h | structure of fab-fragment gb11 in complex with sialyl lewis a | no | immune system | 2025-02-06 | 2026-02-18 | x-ray diffraction | 2.96 | 0.248 | 0.21 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EVKLEESGGGLVQPGGSMKLSCAASGFTFSDAWMDWVRQSPEKGLEWVAEIGNYAINHATYYAESVKGRFAISRDDSKSSVYLQMNSLRPEDTGIYFCTVRFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | DIKMTQSPSSMYASLGERVTFTCRASQDINSYLSWFQQKPGKSPKTLIYRANRLVDGVPSRFSGSGSGQDYSLTISSLEYEDMGIYFCLQYDEFPRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN | EVKLEESGGGLVQPGGSMKLSCAASGFTFSDAWMDWVRQSPEKGLEWVAEIGNYAINHATYYAESVKGRFAISRDDSKSSVYLQMNSLRPEDTGIYFCTVRFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC | DIKMTQSPSSMYASLGERVTFTCRASQDINSYLSWFQQKPGKSPKTLIYRANRLVDGVPSRFSGSGSGQDYSLTISSLEYEDMGIYFCLQYDEFPRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN | 21.343832 | 23.08585 | 217 | 212 | 217 | 212 | 217 | 212 | 101 | igg antibody fab fragment | igg antibody fab fragment | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9n7q_H_L | 9n7q | h1 hemagglutinin (a/michigan/45/2015) in complex with anchor-targeting fab st15 | no | viral protein/immune system | 2025-02-06 | 2026-02-18 | electron microscopy | 3.18 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | H | L | EVQLLESGGGLVQPGGSLRLSCAASGFTFNSYGMSWVRQAPGKGLEWVSAISGSGISTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKGGRDYQPYFYSMDVWGQGTTVTVSS | EIVMTQSPATLSVSPGERATLSCRASQSISSSLAWYQQKPGQSPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPPLTFGGGTRVEIK | EVQLLESGGGLVQPGGSLRLSCAASGFTFNSYGMSWVRQAPGKGLEWVSAISGSGISTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKGGRDYQPYFYSMDVWGQGTTVTVSS | IVMTQSPATLSVSPGERATLSCRASQSISSSLAWYQQKPGQSPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPPLTFGGGTRVEIK | 13.935321 | 13.127694 | 123 | 108 | 123 | 107 | 123 | 107 | 44 | st15 heavy chain fab | st15 light chain fab | homo sapiens | homo sapiens | a;A | protein;protein | h1 ha2;h1 ha1 | influenza a virus;influenza a virus | 46;18 | 19;8 | 0.86;0.8 | HL | train |
9n7q_E_G | 9n7q | h1 hemagglutinin (a/michigan/45/2015) in complex with anchor-targeting fab st15 | no | viral protein/immune system | 2025-02-06 | 2026-02-18 | electron microscopy | 3.18 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | E | G | EVQLLESGGGLVQPGGSLRLSCAASGFTFNSYGMSWVRQAPGKGLEWVSAISGSGISTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKGGRDYQPYFYSMDVWGQGTTVTVSS | EIVMTQSPATLSVSPGERATLSCRASQSISSSLAWYQQKPGQSPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPPLTFGGGTRVEIK | EVQLLESGGGLVQPGGSLRLSCAASGFTFNSYGMSWVRQAPGKGLEWVSAISGSGISTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKGGRDYQPYFYSMDVWGQGTTVTVSS | IVMTQSPATLSVSPGERATLSCRASQSISSSLAWYQQKPGQSPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPPLTFGGGTRVEIK | 13.935331 | 13.127687 | 123 | 108 | 123 | 107 | 123 | 107 | 44 | st15 heavy chain fab | st15 light chain fab | homo sapiens | homo sapiens | b;B | protein;protein | h1 ha2;h1 ha1 | influenza a virus;influenza a virus | 46;18 | 19;8 | 0.86;0.8 | HL | train |
9n7q_D_F | 9n7q | h1 hemagglutinin (a/michigan/45/2015) in complex with anchor-targeting fab st15 | no | viral protein/immune system | 2025-02-06 | 2026-02-18 | electron microscopy | 3.18 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGKV3 | D | F | EVQLLESGGGLVQPGGSLRLSCAASGFTFNSYGMSWVRQAPGKGLEWVSAISGSGISTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKGGRDYQPYFYSMDVWGQGTTVTVSS | EIVMTQSPATLSVSPGERATLSCRASQSISSSLAWYQQKPGQSPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPPLTFGGGTRVEIK | EVQLLESGGGLVQPGGSLRLSCAASGFTFNSYGMSWVRQAPGKGLEWVSAISGSGISTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAKGGRDYQPYFYSMDVWGQGTTVTVSS | IVMTQSPATLSVSPGERATLSCRASQSISSSLAWYQQKPGQSPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPPLTFGGGTRVEIK | 13.935331 | 13.127681 | 123 | 108 | 123 | 107 | 123 | 107 | 44 | st15 heavy chain fab | st15 light chain fab | homo sapiens | homo sapiens | c;C | protein;protein | h1 ha2;h1 ha1 | influenza a virus;influenza a virus | 46;18 | 19;8 | 0.86;0.8 | HL | train |
9n7s_H_L | 9n7s | h1 hemagglutinin (a/california/04/2009) with e47k mutation in ha2 in complex with central stem-targeting fab st10 | no | viral protein/immune system | 2025-02-06 | 2026-02-18 | electron microscopy | 2.97 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV4 | H | L | QVQLQESGPGLVKPSGTLSLTCAVSGGSISSNNWWTWVRQSPGKGLEWMGEIFHSGSTSYNPSLNSRVTMSVDKSKNQFSLRLNSLTAADTAVYYCARLQQIMIYGLIRGGAMDVWGQGTTVTVSS | DIVLTQSPDSLAVSLGERASINCRSSQSLLNRSNNKNFLAWYQQTPGQPPKLLIYWASTRESGVPDRFTGSGSGADFTLTISSLQAEDVAVYYCQQYYTTPRTFGQGTKVEIK | VQLQESGPGLVKPSGTLSLTCAVSGGSISSNNWWTWVRQSPGKGLEWMGEIFHSGSTSYNPSLNSRVTMSVDKSKNQFSLRLNSLTAADTAVYYCARLQQIMIYGLIRGGAMDVWGQGTTVTV | IVLTQSPDSLAVSLGERASINCRSSQSLLNRSNNKNFLAWYQQTPGQPPKLLIYWASTRESGVPDRFTGSGSGADFTLTISSLQAEDVAVYYCQQYYTTPRTFGQGTKVEI | 13.921058 | 13.507907 | 126 | 113 | 123 | 111 | 123 | 111 | 49 | st10 heavy chain fab | st10 light chain fab | homo sapiens | homo sapiens | A;a | protein;protein | h1 ha1;h1 ha2 | influenza a virus;influenza a virus | 14;49 | 6;23 | 1.0;0.88 | HL | train |
9n7t_H_L | 9n7t | h5 hemagglutinin (a/jiangsu/nj210/2023) in complex with central stem-targeting fab st14 | no | viral protein/immune system | 2025-02-06 | 2026-02-18 | electron microscopy | 3.01 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV2 | H | L | QVQVVESGGGLVKPGGSLRLSCAASGFIFSDYYMSWIRQAPGKGLDWVSSITSTGSVIYYGDSVRGRFTISRDNAKNSLYLQMNTLRAEDTAVYYCARGNTIFGIVRGWYFDLWGRGTLVTVSS | SALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQYPGKAPKVMIYEVTNRPSGVSNRFSGSKSGNTASLTISGLQTEDEADYYCSSYTGTITHYVFGTGTKVTVL | QVQVVESGGGLVKPGGSLRLSCAASGFIFSDYYMSWIRQAPGKGLDWVSSITSTGSVIYYGDSVRGRFTISRDNAKNSLYLQMNTLRAEDTAVYYCARGNTIFGIVRGWYFDLWGRGTLVTVSS | LTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQYPGKAPKVMIYEVTNRPSGVSNRFSGSKSGNTASLTISGLQTEDEADYYCSSYTGTITHYVFGTGTKVT | 13.916655 | 13.117616 | 124 | 110 | 124 | 106 | 124 | 106 | 42 | st14 heavy chain fab | st14 light chain fab | homo sapiens | homo sapiens | A;a | protein;protein | h5 ha1;h5 ha2 | influenza a virus;influenza a virus | 15;35 | 7;16 | 1.0;0.89 | HL | train |
9n7t_D_F | 9n7t | h5 hemagglutinin (a/jiangsu/nj210/2023) in complex with central stem-targeting fab st14 | no | viral protein/immune system | 2025-02-06 | 2026-02-18 | electron microscopy | 3.01 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV2 | D | F | QVQVVESGGGLVKPGGSLRLSCAASGFIFSDYYMSWIRQAPGKGLDWVSSITSTGSVIYYGDSVRGRFTISRDNAKNSLYLQMNTLRAEDTAVYYCARGNTIFGIVRGWYFDLWGRGTLVTVSS | SALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQYPGKAPKVMIYEVTNRPSGVSNRFSGSKSGNTASLTISGLQTEDEADYYCSSYTGTITHYVFGTGTKVTVL | QVQVVESGGGLVKPGGSLRLSCAASGFIFSDYYMSWIRQAPGKGLDWVSSITSTGSVIYYGDSVRGRFTISRDNAKNSLYLQMNTLRAEDTAVYYCARGNTIFGIVRGWYFDLWGRGTLVTVSS | LTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQYPGKAPKVMIYEVTNRPSGVSNRFSGSKSGNTASLTISGLQTEDEADYYCSSYTGTITHYVFGTGTKVT | 13.91642 | 13.117447 | 124 | 110 | 124 | 106 | 124 | 106 | 42 | st14 heavy chain fab | st14 light chain fab | homo sapiens | homo sapiens | B;I | protein;protein | h5 ha1;h5 ha2 | influenza a virus;influenza a virus | 15;35 | 7;16 | 1.0;0.89 | HL | train |
9n7t_E_G | 9n7t | h5 hemagglutinin (a/jiangsu/nj210/2023) in complex with central stem-targeting fab st14 | no | viral protein/immune system | 2025-02-06 | 2026-02-18 | electron microscopy | 3.01 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV2 | E | G | QVQVVESGGGLVKPGGSLRLSCAASGFIFSDYYMSWIRQAPGKGLDWVSSITSTGSVIYYGDSVRGRFTISRDNAKNSLYLQMNTLRAEDTAVYYCARGNTIFGIVRGWYFDLWGRGTLVTVSS | SALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQYPGKAPKVMIYEVTNRPSGVSNRFSGSKSGNTASLTISGLQTEDEADYYCSSYTGTITHYVFGTGTKVTVL | QVQVVESGGGLVKPGGSLRLSCAASGFIFSDYYMSWIRQAPGKGLDWVSSITSTGSVIYYGDSVRGRFTISRDNAKNSLYLQMNTLRAEDTAVYYCARGNTIFGIVRGWYFDLWGRGTLVTVSS | LTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQYPGKAPKVMIYEVTNRPSGVSNRFSGSKSGNTASLTISGLQTEDEADYYCSSYTGTITHYVFGTGTKVT | 13.916384 | 13.116927 | 124 | 110 | 124 | 106 | 124 | 106 | 42 | st14 heavy chain fab | st14 light chain fab | homo sapiens | homo sapiens | C;J | protein;protein | h5 ha1;h5 ha2 | influenza a virus;influenza a virus | 15;35 | 7;16 | 1.0;0.89 | HL | train |
9n7v_H_L | 9n7v | h1 hemagglutinin (a/michigan/45/2015) in complex with anchor-targeting fab st4 | no | viral protein/immune system | 2025-02-06 | 2026-02-18 | electron microscopy | 3.15 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV3 | IGLV2 | H | L | QVQLVESGGGVVRPGKSLRLSCAASGFTLSNHALHWVRQAPGKGLEWVAAISYDGSIKYYADSVKDRFTISRDNSKTTLYMQMDSLRPEDTAVYYCARGGWLRFVFLWHFDLWGRGTLVTVSS | QSALTQPASVSGSPGQSITISCTATSSDVGTYNSVSWYQHYPGKAPKLILFDVNNRPSGVSNRFSGSKSGKTASLTISGLQAEDEADYYCSSNTGRSTMFGGGTKLTVL | VQLVESGGGVVRPGKSLRLSCAASGFTLSNHALHWVRQAPGKGLEWVAAISYDGSIKYYADSVKDRFTISRDNSKTTLYMQMDSLRPEDTAVYYCARGGWLRFVFLWHFDLWGRGTLVTV | QSALTQPASVSGSPGQSITISCTATSSDVGTYNSVSWYQHYPGKAPKLILFDVNNRPSGVSNRFSGSKSGKTASLTISGLQAEDEADYYCSSNTGRSTMFGGGTKLTVL | 13.310701 | 12.824503 | 123 | 109 | 105 | 103 | 120 | 109 | 40 | st4 heavy chain fab | st4 light chain fab | homo sapiens | homo sapiens | a;A | protein;protein | h1 ha2;h1 ha1 | influenza a virus;influenza a virus | 41;21 | 8;6 | 0.4;0.46 | HL | train |
9lu3_H_L | 9lu3 | ln1f9 fab bound to nipah virus attachment (g) glycoprotein head domain | no | viral protein/immune system | 2025-02-07 | 2025-11-26 | x-ray diffraction | 3 | 0.269 | 0.219 | 41315143 | 10.1038/s41541-025-01319-2 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EVKLVESGGGLVKPGGSLKLSCAASGFSFRNYAMSWVRQSPEKRLEWVAEVSSGGGYTYYPDTVTGRFTISRDNAKNILYLEMSSLRSEDTAMYYCTRDPDSSGYLAWFAYWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHHHHHH | DILLTQSPASLSASVGETVTITCRASENINSYLAWYQQKQGKSPQLLVYNAKTLAEGVPSRFSGSGSDTQFSLKINTLQPEDFGTYYCQHHSGTPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVKLVESGGGLVKPGGSLKLSCAASGFSFRNYAMSWVRQSPEKRLEWVAEVSSGGGYTYYPDTVTGRFTISRDNAKNILYLEMSSLRSEDTAMYYCTRDPDSSGYLAWFAYWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DILLTQSPASLSASVGETVTITCRASENINSYLAWYQQKQGKSPQLLVYNAKTLAEGVPSRFSGSGSDTQFSLKINTLQPEDFGTYYCQHHSGTPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 21.218597 | 22.842127 | 234 | 214 | 223 | 214 | 223 | 214 | 105 | mab ln1f9 fab heavy chain | mab ln1f9 fab light chain | mus musculus | mus musculus | A | protein | glycoprotein g | henipavirus nipahense | 30 | 14 | 0.93 | HL | train |
9lu3_D_E | 9lu3 | ln1f9 fab bound to nipah virus attachment (g) glycoprotein head domain | no | viral protein/immune system | 2025-02-07 | 2025-11-26 | x-ray diffraction | 3 | 0.269 | 0.219 | 41315143 | 10.1038/s41541-025-01319-2 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | D | E | EVKLVESGGGLVKPGGSLKLSCAASGFSFRNYAMSWVRQSPEKRLEWVAEVSSGGGYTYYPDTVTGRFTISRDNAKNILYLEMSSLRSEDTAMYYCTRDPDSSGYLAWFAYWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHHHHHH | DILLTQSPASLSASVGETVTITCRASENINSYLAWYQQKQGKSPQLLVYNAKTLAEGVPSRFSGSGSDTQFSLKINTLQPEDFGTYYCQHHSGTPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVKLVESGGGLVKPGGSLKLSCAASGFSFRNYAMSWVRQSPEKRLEWVAEVSSGGGYTYYPDTVTGRFTISRDNAKNILYLEMSSLRSEDTAMYYCTRDPDSSGYLAWFAYWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DILLTQSPASLSASVGETVTITCRASENINSYLAWYQQKQGKSPQLLVYNAKTLAEGVPSRFSGSGSDTQFSLKINTLQPEDFGTYYCQHHSGTPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSF | 21.122137 | 22.501152 | 234 | 214 | 222 | 209 | 222 | 209 | 105 | mab ln1f9 fab heavy chain | mab ln1f9 fab light chain | mus musculus | mus musculus | B | protein | glycoprotein g | henipavirus nipahense | 31 | 13 | 0.87 | HL | train |
9luk_H_L | 9luk | crystal structure of switchbody based on anti-osteocalcin antibody ktm219 fab | no | immune system | 2025-02-08 | 2025-10-08 | x-ray diffraction | 1.95 | 0.238 | 0.202 | 40953287 | 10.1002/advs.202508422 | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV2 | H | L | MSVSGWRLFKKISGGGSTGQVKLQQSGAEFVKAGASVKLSCKTSGYTFNNYWIHWVKQSPGQGLEWIGEIDPSDGYSNYNQKFKGKATLTVDKSSSTAYMHLNSLTSEDSAVYYCTSSTSVGGSWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSASAGGGSWSHPQFEKSAAHHHHHHGAAEQKLISEEDLNGAA | MSDIELTQSPLSLPVSLGDQASISCTSSQSLLHSNGDTYLHWYLQKPGQSPKLLIYTLSNRFSGVPDRFSGSGSGTDFTLKISRVEAADLGIYFCSQTTHVPYTFGGGTKLEIKRADAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEGGGSWSHPQFEK | QVKLQQSGAEFVKAGASVKLSCKTSGYTFNNYWIHWVKQSPGQGLEWIGEIDPSDGYSNYNQKFKGKATLTVDKSSSTAYMHLNSLTSEDSAVYYCTSSTSVGGSWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | SDIELTQSPLSLPVSLGDQASISCTSSQSLLHSNGDTYLHWYLQKPGQSPKLLIYTLSNRFSGVPDRFSGSGSGTDFTLKISRVEAADLGIYFCSQTTHVPYTFGGGTKLEIKRADAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 22.590702 | 23.021576 | 278 | 232 | 216 | 217 | 216 | 217 | 90 | heavy chain fragment (fd) of anti-osteocalcin antibody ktm219 with n-terminal hibit | light chain of anti-osteocalcin antibody ktm219 | mus musculus | mus musculus | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9lue_A_B | 9lue | cryo-em structure of the nipah g head domain in complex with three fabs | no | viral protein/immune system | 2025-02-08 | 2025-11-26 | electron microscopy | 3.03 | N.A. | N.A. | 41315143 | 10.1038/s41541-025-01319-2 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV7 | A | B | QMQLQESGPGLVKPSQSLSLTCTVTGYSITSDYAWNWIRQFPRNKLEWMGFITYSGSTSYNPSLKSRISLTRDTSKNQFFLQLSSVTTEDTATYYCARSGANWDWFAYWGQGTLVTVSA | DIQMTQSPASLAVSLGQRATISCRASESVDNYGNSFMHWYQQKPGQPPKLLIYRASKLESGIPARFSGSGSRTDFTLTINPVEADDVATYHCQQSNEDPWTFGGGTKLEIK | QMQLQESGPGLVKPSQSLSLTCTVTGYSITSDYAWNWIRQFPRNKLEWMGFITYSGSTSYNPSLKSRISLTRDTSKNQFFLQLSSVTTEDTATYYCARSGANWDWFAYWGQGTLVTVS | DIQMTQSPASLAVSLGQRATISCRASESVDNYGNSFMHWYQQKPGQPPKLLIYRASKLESGIPARFSGSGSRTDFTLTINPVEADDVATYHCQQSNEDPWTFGGGTKL | 13.583604 | 13.318932 | 119 | 111 | 118 | 108 | 118 | 108 | 45 | niv s2b10 fab heavy chain | niv s2b10 fab light chain | mesocricetus auratus | mesocricetus auratus | G | protein | glycoprotein g | henipavirus nipahense | 62 | 24 | 0.77 | HL | train |
9lue_C_D | 9lue | cryo-em structure of the nipah g head domain in complex with three fabs | no | viral protein/immune system | 2025-02-08 | 2025-11-26 | electron microscopy | 3.03 | N.A. | N.A. | 41315143 | 10.1038/s41541-025-01319-2 | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV3 | C | D | QMQLQESGPGLVKPSQSLSLTCSVTGYSITSGYYWNWIRQFSGNKLEWMGYINHDGSKNYNPSLKNRISITRDTSKNQFFLKLNSVTTEDTATYYCARDYGSYYYPMDYWGQGTSVTVSS | EIVLTQSPPIMSASPGEKVTITCSASSSVTFMHWFQQKPGTSPKLWIFSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPFTFGSGTKLEIK | QMQLQESGPGLVKPSQSLSLTCSVTGYSITSGYYWNWIRQFSGNKLEWMGYINHDGSKNYNPSLKNRISITRDTSKNQFFLKLNSVTTEDTATYYCARDYGSYYYPMDYWGQGTSVTVSS | EIVLTQSPPIMSASPGEKVTITCSASSSVTFMHWFQQKPGTSPKLWIFSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPFTFGSGTKLEI | 13.964886 | 12.952437 | 120 | 106 | 120 | 105 | 120 | 105 | 46 | niv s1e2 fab heavy chain | niv s1e2 fab light chain | mesocricetus auratus | mesocricetus auratus | G | protein | glycoprotein g | henipavirus nipahense | 38 | 16 | 0.76 | HL | train |
9lue_H_L | 9lue | cryo-em structure of the nipah g head domain in complex with three fabs | no | viral protein/immune system | 2025-02-08 | 2025-11-26 | electron microscopy | 3.03 | N.A. | N.A. | 41315143 | 10.1038/s41541-025-01319-2 | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | H | L | EVKLEESGPELVKPGASVKMSCKASGYTFTNYVMHWVKQKPGQGLEWIGYVNPYNDGTQYNEKFRDKATLTSDKSSSTVYMELNSLTSEDSAVYYCTRGDYPYWVFEVWGAGTTVTVSS | EIQMTQSPATLSVTPGDSVSLSCRASQSISNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINNLETEDFGMYFCQHSDSWPFTFGSGTKLEIK | EVKLEESGPELVKPGASVKMSCKASGYTFTNYVMHWVKQKPGQGLEWIGYVNPYNDGTQYNEKFRDKATLTSDKSSSTVYMELNSLTSEDSAVYYCTRGDYPYWVFEVWGAGTTVTVSS | EIQMTQSPATLSVTPGDSVSLSCRASQSISNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINNLETEDFGMYFCQHSDSWPFTFGSGTK | 13.723011 | 13.045572 | 119 | 107 | 119 | 103 | 119 | 103 | 44 | niv ln3d3 fab heavy chain | niv ln3d3 fab light chain | mesocricetus auratus | mesocricetus auratus | G | protein | glycoprotein g | henipavirus nipahense | 45 | 19 | 0.79 | HL | train |
9n8i_A_B | 9n8i | pfs230 domain 1 bound by rupa-39 fab | no | immune system | 2025-02-08 | 2026-02-04 | x-ray diffraction | 1.85 | 0.233 | 0.188 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | A | B | DVQLVESGGGLVKPGGSLRLSCAASGFTFSSYTMNWVRQAPGKGLEWVSSISTNIRYIYYADSVKGRFTISRDNAKNSLFLQMDSLRAEDTAVYYCATIAGPLSLKGDFYFDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVMTQSPATLSVSPGERATLSCRASQSVSSSLAWYQQKPGQAPRLLIHGASTRATGIPTRFSGSGSGTEFTLTISSLQSEDFAVYYCQQYANWPPWTFGQGTKVESKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | DVQLVESGGGLVKPGGSLRLSCAASGFTFSSYTMNWVRQAPGKGLEWVSSISTNIRYIYYADSVKGRFTISRDNAKNSLFLQMDSLRAEDTAVYYCATIAGPLSLKGDFYFDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVMTQSPATLSVSPGERATLSCRASQSVSSSLAWYQQKPGQAPRLLIHGASTRATGIPTRFSGSGSGTEFTLTISSLQSEDFAVYYCQQYANWPPWTFGQGTKVESKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 23.394512 | 22.428858 | 227 | 215 | 227 | 215 | 227 | 215 | 111 | rupa-39 heavy chain | rupa-39 kappa chain | homo sapiens | homo sapiens | E | protein | gametocyte surface protein p230 | plasmodium falciparum 3d7 | 46 | 17 | 0.85 | HL | train |
9n8i_F | 9n8i | pfs230 domain 1 bound by rupa-39 fab | no | immune system | 2025-02-08 | 2026-02-04 | x-ray diffraction | 1.85 | 0.233 | 0.188 | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | F | N.A. | GQVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVSS | N.A. | GQVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVSS | N.A. | 13.745064 | 0 | 122 | 0 | 122 | 0 | 122 | 0 | 0 | anti-kappa nanobody | N.A. | lama glama | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
9n8f_H_L | 9n8f | cryo-em structure of sudv glycoprotein with modified hr1c (l579p) and hr2 stalk bound to ca45 fab | yes | viral protein | 2025-02-08 | 2026-02-18 | electron microscopy | 3.13 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | H | L | VQLQEWGEGLVKPSETLSLTCAVYGGSISGYYHWNWIRLPPGKGLEWIGNIDGNSASTNYNPSLKTRVTISKDTSKNQISLKVRSLTAADTAVYYCARDPGFTIFGVVITSWSGLDSWGQGAVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHT | DIQMTQSPSSLSASVGDTVTITCRASQSISNNLAWYQQRPRRAPQLLIYAASNLASGVPSRFSGSGSGTDFTLTISSLQAEDFAAYYCQQHNTLPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS | VQLQEWGEGLVKPSETLSLTCAVYGGSISGYYHWNWIRLPPGKGLEWIGNIDGNSASTNYNPSLKTRVTISKDTSKNQISLKVRSLTAADTAVYYCARDPGFTIFGVVITSWSGLDSWGQGAVVTVS | DIQMTQSPSSLSASVGDTVTITCRASQSISNNLAWYQQRPRRAPQLLIYAASNLASGVPSRFSGSGSGTDFTLTISSLQAEDFAAYYCQQHNTLPLTFGGGTKVEIKR | 14.763664 | 13.943815 | 236 | 215 | 127 | 108 | 127 | 108 | 39 | ca45 fab heavy chain | ca45 fab light chain | homo sapiens | homo sapiens | A;D | protein;protein | sudv gulu - gp1;sudv gulu - gp2 | sudan ebolavirus (strain human/uganda/gulu/2000);sudan ebolavirus (strain human/uganda/gulu/2000) | 13;38 | 5;18 | 1.0;0.9 | HL | train |
9n8f_J_N | 9n8f | cryo-em structure of sudv glycoprotein with modified hr1c (l579p) and hr2 stalk bound to ca45 fab | yes | viral protein | 2025-02-08 | 2026-02-18 | electron microscopy | 3.13 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | J | N | VQLQEWGEGLVKPSETLSLTCAVYGGSISGYYHWNWIRLPPGKGLEWIGNIDGNSASTNYNPSLKTRVTISKDTSKNQISLKVRSLTAADTAVYYCARDPGFTIFGVVITSWSGLDSWGQGAVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHT | DIQMTQSPSSLSASVGDTVTITCRASQSISNNLAWYQQRPRRAPQLLIYAASNLASGVPSRFSGSGSGTDFTLTISSLQAEDFAAYYCQQHNTLPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS | VQLQEWGEGLVKPSETLSLTCAVYGGSISGYYHWNWIRLPPGKGLEWIGNIDGNSASTNYNPSLKTRVTISKDTSKNQISLKVRSLTAADTAVYYCARDPGFTIFGVVITSWSGLDSWGQGAVVTVS | DIQMTQSPSSLSASVGDTVTITCRASQSISNNLAWYQQRPRRAPQLLIYAASNLASGVPSRFSGSGSGTDFTLTISSLQAEDFAAYYCQQHNTLPLTFGGGTKVEIKR | 14.642128 | 13.546364 | 236 | 215 | 127 | 108 | 127 | 108 | 37 | ca45 fab heavy chain | ca45 fab light chain | homo sapiens | homo sapiens | C;F | protein;protein | sudv gulu - gp1;sudv gulu - gp2 | sudan ebolavirus (strain human/uganda/gulu/2000);sudan ebolavirus (strain human/uganda/gulu/2000) | 17;42 | 7;20 | 1.0;0.87 | HL | train |
9n8f_I_M | 9n8f | cryo-em structure of sudv glycoprotein with modified hr1c (l579p) and hr2 stalk bound to ca45 fab | yes | viral protein | 2025-02-08 | 2026-02-18 | electron microscopy | 3.13 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV4 | IGKV1 | I | M | VQLQEWGEGLVKPSETLSLTCAVYGGSISGYYHWNWIRLPPGKGLEWIGNIDGNSASTNYNPSLKTRVTISKDTSKNQISLKVRSLTAADTAVYYCARDPGFTIFGVVITSWSGLDSWGQGAVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHT | DIQMTQSPSSLSASVGDTVTITCRASQSISNNLAWYQQRPRRAPQLLIYAASNLASGVPSRFSGSGSGTDFTLTISSLQAEDFAAYYCQQHNTLPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS | VQLQEWGEGLVKPSETLSLTCAVYGGSISGYYHWNWIRLPPGKGLEWIGNIDGNSASTNYNPSLKTRVTISKDTSKNQISLKVRSLTAADTAVYYCARDPGFTIFGVVITSWSGLDSWGQGAVVTVS | DIQMTQSPSSLSASVGDTVTITCRASQSISNNLAWYQQRPRRAPQLLIYAASNLASGVPSRFSGSGSGTDFTLTISSLQAEDFAAYYCQQHNTLPLTFGGGTKVEIKR | 14.635098 | 13.790353 | 236 | 215 | 127 | 108 | 127 | 108 | 41 | ca45 fab heavy chain | ca45 fab light chain | homo sapiens | homo sapiens | E | protein | sudv gulu - gp2 | sudan ebolavirus (strain human/uganda/gulu/2000) | 37 | 17 | 0.85 | HL | train |
9n8q_H_L | 9n8q | crystal structure of trastuzumab fab with p151a | no | immune system | 2025-02-09 | 2025-10-22 | x-ray diffraction | 2.6 | 0.278 | 0.213 | 41057658 | 10.1038/s41587-025-02842-2 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAKLGCLVKDYFAEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCHHHHHH | DIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKRTVAAPSVDIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNIKDTYIHWVRQAPGKGLEWVARIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCSRWGGDGFYAMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAKLGCLVKDYFAEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | DIQMTQSPSSLSASVGDRVTITCRASQDVNTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQHYTTPPTFGQGTKVEIKRTVAAPSVDIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 20.745811 | 23.343714 | 229 | 214 | 215 | 213 | 220 | 213 | 85 | trastuzumab fab heavy chain | trastuzumab fab light chain | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9n8n_A_B | 9n8n | tandem antigen chimera of pfs230 and pfs48/45 bound by potent mabs | no | immune system | 2025-02-09 | 2026-02-04 | x-ray diffraction | 2.22 | 0.21 | 0.174 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV3 | A | B | DVQLVESGGGLVKPGGSLRLSCAASGFTFSSYTMNWVRQAPGKGLEWVSSISTNIRYIYYADSVKGRFTISRDNAKNSLFLQMDSLRAEDTAVYYCATIAGPLSLKGDFYFDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVMTQSPATLSVSPGERATLSCRASQSVSSSLAWYQQKPGQAPRLLIHGASTRATGIPTRFSGSGSGTEFTLTISSLQSEDFAVYYCQQYANWPPWTFGQGTKVESKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | DVQLVESGGGLVKPGGSLRLSCAASGFTFSSYTMNWVRQAPGKGLEWVSSISTNIRYIYYADSVKGRFTISRDNAKNSLFLQMDSLRAEDTAVYYCATIAGPLSLKGDFYFDSWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP | EIVMTQSPATLSVSPGERATLSCRASQSVSSSLAWYQQKPGQAPRLLIHGASTRATGIPTRFSGSGSGTEFTLTISSLQSEDFAVYYCQQYANWPPWTFGQGTKVESKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 21.978792 | 22.938602 | 227 | 215 | 217 | 214 | 224 | 214 | 92 | rupa-39 heavy chain | rupa-39 kappa chain | homo sapiens | homo sapiens | I | protein | gametocyte surface protein p230,gametocyte surface protein p45/48 | plasmodium falciparum 3d7 | 47 | 18 | 0.78 | HL | train |
9n8n_F_E | 9n8n | tandem antigen chimera of pfs230 and pfs48/45 bound by potent mabs | no | immune system | 2025-02-09 | 2026-02-04 | x-ray diffraction | 2.22 | 0.21 | 0.174 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV4 | IGKV1 | F | E | QLQLQESGPGLVKPSETLSLTCTVSGGSISRSPYYWGWIRQPPGKGLEWFGSIYNNGSTYYNPPLKSRLTISVDTSKNQFSLKLSSVTAADTAVYYCARHGGSTGMKVVVIAPPDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | DIQMTQSPATLSASVGDRVTITCRASQSISSWLAWYQQKPGEAPKLLIYKASSLQSGVPSRFSGSGSGTKFSLTISSLQPDDFATFYCQQYHSYPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | QLQLQESGPGLVKPSETLSLTCTVSGGSISRSPYYWGWIRQPPGKGLEWFGSIYNNGSTYYNPPLKSRLTISVDTSKNQFSLKLSSVTAADTAVYYCARHGGSTGMKVVVIAPPDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPATLSASVGDRVTITCRASQSISSWLAWYQQKPGEAPKLLIYKASSLQSGVPSRFSGSGSGTKFSLTISSLQPDDFATFYCQQYHSYPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE | 21.344585 | 23.433002 | 230 | 214 | 222 | 209 | 228 | 213 | 98 | rupa-44 heavy chain | rupa-44 kappa chain | homo sapiens | homo sapiens | I | protein | gametocyte surface protein p230,gametocyte surface protein p45/48 | plasmodium falciparum 3d7 | 44 | 20 | 0.77 | HL | train |
9lux_A | 9lux | single-chain fv antibody of g2 fused with antigen peptide from chicken prion protein | no | immune system | 2025-02-10 | 2025-06-11 | x-ray diffraction | 1.85 | 0.226 | 0.194 | 40527602 | 10.1002/1873-3468.70095 | 0 | auth_asym_id | scFv | N.A. | N.A. | A | N.A. | MGEAVAAANQTEVEMENKVVLEVLFQGPDIVLTQSPASLAVSLGQRATISCKASQTLDYDGGTYMNWYQQKPGQPPKLLIFAASNLESGIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQSREDLTFGAGTKLDLKGGGGSGGGGSGGGGSEVMLVESGGVLVKPGGSLKLSCSASGFTFSRYAMSWVRQTPEKRLEWVASISSGGSYTFYPDSVKGRFTISRNNAKNFLYLKMSSLRSEDTAMYYCARSGNDYAVDYWGQGTSVTVSS | N.A. | GEAVAAANQTEVEMENKVVLEVLFQGPDIVLTQSPASLAVSLGQRATISCKASQTLDYDGGTYMNWYQQKPGQPPKLLIFAASNLESGIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQSREDLTFGAGTKLDLKGGGGSGGGGSGGGGSEVMLVESGGVLVKPGGSLKLSCSASGFTFSRYAMSWVRQTPEKRLEWVASISSGGSYTFYPDSVKGRFTISRNNAKNFLYLKMSSLRSEDTAMYYCARSGNDYAVDYWGQGTSVTVSS | N.A. | 18.008705 | 0 | 271 | 0 | 255 | 0 | 270 | 0 | 0 | major prion protein homolog,single-chain fv antibody of g2 fused with antigen peptide from chicken prion protein | N.A. | gallus gallus | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
9lux_B | 9lux | single-chain fv antibody of g2 fused with antigen peptide from chicken prion protein | no | immune system | 2025-02-10 | 2025-06-11 | x-ray diffraction | 1.85 | 0.226 | 0.194 | 40527602 | 10.1002/1873-3468.70095 | 0 | auth_asym_id | scFv | N.A. | N.A. | B | N.A. | MGEAVAAANQTEVEMENKVVLEVLFQGPDIVLTQSPASLAVSLGQRATISCKASQTLDYDGGTYMNWYQQKPGQPPKLLIFAASNLESGIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQSREDLTFGAGTKLDLKGGGGSGGGGSGGGGSEVMLVESGGVLVKPGGSLKLSCSASGFTFSRYAMSWVRQTPEKRLEWVASISSGGSYTFYPDSVKGRFTISRNNAKNFLYLKMSSLRSEDTAMYYCARSGNDYAVDYWGQGTSVTVSS | N.A. | GEAVAAANQTEVEMENKVVLEVLFQGPDIVLTQSPASLAVSLGQRATISCKASQTLDYDGGTYMNWYQQKPGQPPKLLIFAASNLESGIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQSREDLTFGAGTKLDLKGGGGSGGGGSGGGGSEVMLVESGGVLVKPGGSLKLSCSASGFTFSRYAMSWVRQTPEKRLEWVASISSGGSYTFYPDSVKGRFTISRNNAKNFLYLKMSSLRSEDTAMYYCARSGNDYAVDYWGQGTSVTVSS | N.A. | 18.03269 | 0 | 271 | 0 | 255 | 0 | 270 | 0 | 0 | major prion protein homolog,single-chain fv antibody of g2 fused with antigen peptide from chicken prion protein | N.A. | gallus gallus | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
9lux_C | 9lux | single-chain fv antibody of g2 fused with antigen peptide from chicken prion protein | no | immune system | 2025-02-10 | 2025-06-11 | x-ray diffraction | 1.85 | 0.226 | 0.194 | 40527602 | 10.1002/1873-3468.70095 | 0 | auth_asym_id | scFv | N.A. | N.A. | C | N.A. | MGEAVAAANQTEVEMENKVVLEVLFQGPDIVLTQSPASLAVSLGQRATISCKASQTLDYDGGTYMNWYQQKPGQPPKLLIFAASNLESGIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQSREDLTFGAGTKLDLKGGGGSGGGGSGGGGSEVMLVESGGVLVKPGGSLKLSCSASGFTFSRYAMSWVRQTPEKRLEWVASISSGGSYTFYPDSVKGRFTISRNNAKNFLYLKMSSLRSEDTAMYYCARSGNDYAVDYWGQGTSVTVSS | N.A. | GEAVAAANQTEVEMENKVVLEVLFQGPDIVLTQSPASLAVSLGQRATISCKASQTLDYDGGTYMNWYQQKPGQPPKLLIFAASNLESGIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQSREDLTFGAGTKLDLKGGGGSGGGGSGGGGSEVMLVESGGVLVKPGGSLKLSCSASGFTFSRYAMSWVRQTPEKRLEWVASISSGGSYTFYPDSVKGRFTISRNNAKNFLYLKMSSLRSEDTAMYYCARSGNDYAVDYWGQGTSVTVSS | N.A. | 17.972616 | 0 | 271 | 0 | 252 | 0 | 270 | 0 | 0 | major prion protein homolog,single-chain fv antibody of g2 fused with antigen peptide from chicken prion protein | N.A. | gallus gallus | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
9lux_D | 9lux | single-chain fv antibody of g2 fused with antigen peptide from chicken prion protein | no | immune system | 2025-02-10 | 2025-06-11 | x-ray diffraction | 1.85 | 0.226 | 0.194 | 40527602 | 10.1002/1873-3468.70095 | 0 | auth_asym_id | scFv | N.A. | N.A. | D | N.A. | MGEAVAAANQTEVEMENKVVLEVLFQGPDIVLTQSPASLAVSLGQRATISCKASQTLDYDGGTYMNWYQQKPGQPPKLLIFAASNLESGIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQSREDLTFGAGTKLDLKGGGGSGGGGSGGGGSEVMLVESGGVLVKPGGSLKLSCSASGFTFSRYAMSWVRQTPEKRLEWVASISSGGSYTFYPDSVKGRFTISRNNAKNFLYLKMSSLRSEDTAMYYCARSGNDYAVDYWGQGTSVTVSS | N.A. | GEAVAAANQTEVEMENKVVLEVLFQGPDIVLTQSPASLAVSLGQRATISCKASQTLDYDGGTYMNWYQQKPGQPPKLLIFAASNLESGIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQSREDLTFGAGTKLDLKGGGGSGGGGSGGGGSEVMLVESGGVLVKPGGSLKLSCSASGFTFSRYAMSWVRQTPEKRLEWVASISSGGSYTFYPDSVKGRFTISRNNAKNFLYLKMSSLRSEDTAMYYCARSGNDYAVDYWGQGTSVTVSS | N.A. | 17.99312 | 0 | 271 | 0 | 252 | 0 | 270 | 0 | 0 | major prion protein homolog,single-chain fv antibody of g2 fused with antigen peptide from chicken prion protein | N.A. | gallus gallus | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
9lux_E | 9lux | single-chain fv antibody of g2 fused with antigen peptide from chicken prion protein | no | immune system | 2025-02-10 | 2025-06-11 | x-ray diffraction | 1.85 | 0.226 | 0.194 | 40527602 | 10.1002/1873-3468.70095 | 0 | auth_asym_id | scFv | N.A. | N.A. | E | N.A. | MGEAVAAANQTEVEMENKVVLEVLFQGPDIVLTQSPASLAVSLGQRATISCKASQTLDYDGGTYMNWYQQKPGQPPKLLIFAASNLESGIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQSREDLTFGAGTKLDLKGGGGSGGGGSGGGGSEVMLVESGGVLVKPGGSLKLSCSASGFTFSRYAMSWVRQTPEKRLEWVASISSGGSYTFYPDSVKGRFTISRNNAKNFLYLKMSSLRSEDTAMYYCARSGNDYAVDYWGQGTSVTVSS | N.A. | GEAVAAANQTEVEMENKVVLEVLFQGPDIVLTQSPASLAVSLGQRATISCKASQTLDYDGGTYMNWYQQKPGQPPKLLIFAASNLESGIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQSREDLTFGAGTKLDLKGGGGSGGGGSGGGGSEVMLVESGGVLVKPGGSLKLSCSASGFTFSRYAMSWVRQTPEKRLEWVASISSGGSYTFYPDSVKGRFTISRNNAKNFLYLKMSSLRSEDTAMYYCARSGNDYAVDYWGQGTSVTVSS | N.A. | 18.022501 | 0 | 271 | 0 | 254 | 0 | 270 | 0 | 0 | major prion protein homolog,single-chain fv antibody of g2 fused with antigen peptide from chicken prion protein | N.A. | gallus gallus | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
9lux_F | 9lux | single-chain fv antibody of g2 fused with antigen peptide from chicken prion protein | no | immune system | 2025-02-10 | 2025-06-11 | x-ray diffraction | 1.85 | 0.226 | 0.194 | 40527602 | 10.1002/1873-3468.70095 | 0 | auth_asym_id | scFv | N.A. | N.A. | F | N.A. | MGEAVAAANQTEVEMENKVVLEVLFQGPDIVLTQSPASLAVSLGQRATISCKASQTLDYDGGTYMNWYQQKPGQPPKLLIFAASNLESGIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQSREDLTFGAGTKLDLKGGGGSGGGGSGGGGSEVMLVESGGVLVKPGGSLKLSCSASGFTFSRYAMSWVRQTPEKRLEWVASISSGGSYTFYPDSVKGRFTISRNNAKNFLYLKMSSLRSEDTAMYYCARSGNDYAVDYWGQGTSVTVSS | N.A. | GEAVAAANQTEVEMENKVVLEVLFQGPDIVLTQSPASLAVSLGQRATISCKASQTLDYDGGTYMNWYQQKPGQPPKLLIFAASNLESGIPARFSGSGSGTDFTLNIHPVEEEDAATYYCQQSREDLTFGAGTKLDLKGGGGSGGGGSGGGGSEVMLVESGGVLVKPGGSLKLSCSASGFTFSRYAMSWVRQTPEKRLEWVASISSGGSYTFYPDSVKGRFTISRNNAKNFLYLKMSSLRSEDTAMYYCARSGNDYAVDYWGQGTSVTVSS | N.A. | 18.043901 | 0 | 271 | 0 | 254 | 0 | 270 | 0 | 0 | major prion protein homolog,single-chain fv antibody of g2 fused with antigen peptide from chicken prion protein | N.A. | gallus gallus | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
9iat_B_A | 9iat | bc8.121 fab | no | immune system | 2025-02-11 | 2025-11-26 | x-ray diffraction | 1.54 | 0.232 | 0.199 | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGLV1 | B | A | EVQLVESGGGLVQPGGSLRLSCVASGFTFSRFEMNWVRQAPGKGLEWVSYISNSGETQYYADSVKGRFIVSRDNAKNSLYLQMNSLRADDTAIYYCLVVLDYWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHHHHHH | QSVLTQAPSASGTPGQGVTIACSGSNSNIGNNYVYWYHQLPGTAPKLIIYTNDQRPSGVPDRFSGSKSGTSASLAISGLRSEDEGDYYCAAWDDSLSSVLFGGGTKLTVLRQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | EVQLVESGGGLVQPGGSLRLSCVASGFTFSRFEMNWVRQAPGKGLEWVSYISNSGETQYYADSVKGRFIVSRDNAKNSLYLQMNSLRADDTAIYYCLVVLDYWGQGALVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | SVLTQAPSASGTPGQGVTIACSGSNSNIGNNYVYWYHQLPGTAPKLIIYTNDQRPSGVPDRFSGSKSGTSASLAISGLRSEDEGDYYCAAWDDSLSSVLFGGGTKLTVLRQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC | 23.800262 | 20.29081 | 225 | 216 | 216 | 214 | 216 | 214 | 95 | bc8.121-fab_igh | bc8.121-fab_igl | homo sapiens | homo sapiens | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | HL | train |
9lvb_H_L | 9lvb | iaa-free aux1 | no | protein transport/immune system | 2025-02-12 | 2025-07-23 | electron microscopy | 3.97 | N.A. | N.A. | 40720658 | 10.1073/pnas.2513424122 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | MGWSLILLFLVAVATRVLSEISEVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKHHHHHH | MGWSCIILFLVATATGVHSSDIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGGSLRLSCAASGFNVVDFSLHWVRQAPGKGLEWVAYISSSSGSTSYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARWGYWPGEPWWKAFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQYLYYSLVTFGQGTKVEIKRTVAAPSVFIFPPSDSQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR | 23.774782 | 22.825691 | 257 | 235 | 225 | 212 | 225 | 212 | 103 | heavy chain | light chain | homo sapiens | homo sapiens | A | protein | auxin transporter protein 1,soluble cytochrome b562 | arabidopsis thaliana | 33 | 17 | 0.85 | HL | train |
9lvb_N | 9lvb | iaa-free aux1 | no | protein transport/immune system | 2025-02-12 | 2025-07-23 | electron microscopy | 3.97 | N.A. | N.A. | 40720658 | 10.1073/pnas.2513424122 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | MDMRVPAQLLGLLLLWLSGARCMDYKDDDDKGGSQVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVSSLEHHHHHHGSDYKDDDDK | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVT | N.A. | 13.787681 | 0 | 173 | 0 | 118 | 0 | 118 | 0 | 0 | nanobody | N.A. | lama glama | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
9naq_H_L | 9naq | cryo-em structure of 110_c4 fab in complex with cidra1.7 pfemp1 | no | immune system | 2025-02-12 | 2025-08-27 | electron microscopy | 3.4 | N.A. | N.A. | 40833410 | 10.1073/pnas.2508744122 | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV10 | H | L | QVHLVQSGAEVKKPGSSATVSCKASGGPFRGYSVSWVRQAPGQGLEWMGQIITMLDTITYAQRFQDRVTIRADETTSTIYMELNSLRSEDTAIYYCARNGNATVGSLGMDVWGRGTTVTVSS | QAGLTQPPSESKGLRETATFTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNNRPSGISERFSASRSGNTASLTITGLQPEDEAVYFCSAWDTSLRAWLFGGGTHLTVLG | QVHLVQSGAEVKKPGSSATVSCKASGGPFRGYSVSWVRQAPGQGLEWMGQIITMLDTITYAQRFQDRVTIRADETTSTIYMELNSLRSEDTAIYYCARNGNATVGSLGMDVWGRGTTVTVSS | QAGLTQPPSESKGLRETATFTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNNRPSGISERFSASRSGNTASLTITGLQPEDEAVYFCSAWDTSLRAWLFGGGTHLTVLG | 13.99652 | 13.692039 | 122 | 111 | 122 | 111 | 122 | 111 | 44 | 110_c4 fab heavy chain | 110_c4 fab light chain | homo sapiens | homo sapiens | A | protein | erythrocyte membrane protein 1 | plasmodium falciparum | 49 | 23 | 0.82 | HL | train |
9nby_M_N | 9nby | amc008 v4.2 sosip env trimer in complex with pgt121, vrc01 and 3bc315 fabs | no | immune system | 2025-02-14 | 2026-01-21 | electron microscopy | 3.16 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | M | N | QVQLVQSGGQMKKPGESMRISCRASGYEFIDCTLNWIRLAPGKRPEWMGWLKPRGGAVNYARPLQGRVTMTRDVYSDTAFLELRSLTVDDTAVYFCTRGKNCDYNWDFEHWGRGTPVIVSSPSTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGETAIISCRTSQYGSLAWYQQRPGQAPRLVIYSGSTRAAGIPDRFSGSRWGPDYNLTISNLESGDFGVYYCQQYEFFGQGTKVQVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC | QVQLVQSGGQMKKPGESMRISCRASGYEFIDCTLNWIRLAPGKRPEWMGWLKPRGGAVNYARPLQGRVTMTRDVYSDTAFLELRSLTVDDTAVYFCTRGKNCDYNWDFEHWGRGTPVIVSSP | VLTQSPGTLSLSPGETAIISCRTSQYGSLAWYQQRPGQAPRLVIYSGSTRAAGIPDRFSGSRWGPDYNLTISNLESGDFGVYYCQQYEFFGQGTKVQVD | 14.174649 | 12.830507 | 224 | 210 | 122 | 99 | 122 | 99 | 37 | vrc01 fab heavy chain | vrc01 fab light chain | homo sapiens | homo sapiens | A | protein | envelope glycoprotein gp120 | human immunodeficiency virus 1 | 57 | 16 | 0.62 | HL | train |
9nby_R_Q | 9nby | amc008 v4.2 sosip env trimer in complex with pgt121, vrc01 and 3bc315 fabs | no | immune system | 2025-02-14 | 2026-01-21 | electron microscopy | 3.16 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV3 | R | Q | QMQLQESGPGLVKPSETLSLTCSVSGASISDSYWSWIRRSPGKGLEWIGYVHKSGDTNYSPSLKSRVNLSLDTSKNQVSLSLVAATAADSGKYYCARTLHGRRIYGIVAFNEWFTYFYMDVWGNGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | SDISVAPGETARISCGEKSLGSRAVQWYQHRAGQAPSLIIYNNQDRPSGIPERFSGSPDSPFGTTATLTITSVEAGDEADYYCHIWDSRVPTKWVFGGGTTLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTECS | QMQLQESGPGLVKPSETLSLTCSVSGASISDSYWSWIRRSPGKGLEWIGYVHKSGDTNYSPSLKSRVNLSLDTSKNQVSLSLVAATAADSGKYYCARTLHGRRIYGIVAFNEWFTYFYMDVWGNGTQVTVS | DISVAPGETARISCGEKSLGSRAVQWYQHRAGQAPSLIIYNNQDRPSGIPERFSGSPDSPFGTTATLTITSVEAGDEADYYCHIWDSRVPTKWVFGGGTTLTVL | 15.868061 | 13.535459 | 235 | 211 | 131 | 104 | 131 | 104 | 50 | pgt121 fab heavy chain | pgt121 fab light chain | homo sapiens | homo sapiens | A | protein | envelope glycoprotein gp120 | human immunodeficiency virus 1 | 24 | 10 | 0.91 | HL | train |
9nby_I_J | 9nby | amc008 v4.2 sosip env trimer in complex with pgt121, vrc01 and 3bc315 fabs | no | immune system | 2025-02-14 | 2026-01-21 | electron microscopy | 3.16 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | I | J | QVQLVQSGGQMKKPGESMRISCRASGYEFIDCTLNWIRLAPGKRPEWMGWLKPRGGAVNYARPLQGRVTMTRDVYSDTAFLELRSLTVDDTAVYFCTRGKNCDYNWDFEHWGRGTPVIVSSPSTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGETAIISCRTSQYGSLAWYQQRPGQAPRLVIYSGSTRAAGIPDRFSGSRWGPDYNLTISNLESGDFGVYYCQQYEFFGQGTKVQVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC | QVQLVQSGGQMKKPGESMRISCRASGYEFIDCTLNWIRLAPGKRPEWMGWLKPRGGAVNYARPLQGRVTMTRDVYSDTAFLELRSLTVDDTAVYFCTRGKNCDYNWDFEHWGRGTPVIVSSP | VLTQSPGTLSLSPGETAIISCRTSQYGSLAWYQQRPGQAPRLVIYSGSTRAAGIPDRFSGSRWGPDYNLTISNLESGDFGVYYCQQYEFFGQGTKVQVD | 14.174674 | 12.762909 | 224 | 210 | 122 | 99 | 122 | 99 | 36 | vrc01 fab heavy chain | vrc01 fab light chain | homo sapiens | homo sapiens | C | protein | envelope glycoprotein gp120 | human immunodeficiency virus 1 | 60 | 15 | 0.58 | HL | train |
9nby_L_K | 9nby | amc008 v4.2 sosip env trimer in complex with pgt121, vrc01 and 3bc315 fabs | no | immune system | 2025-02-14 | 2026-01-21 | electron microscopy | 3.16 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV3 | L | K | QMQLQESGPGLVKPSETLSLTCSVSGASISDSYWSWIRRSPGKGLEWIGYVHKSGDTNYSPSLKSRVNLSLDTSKNQVSLSLVAATAADSGKYYCARTLHGRRIYGIVAFNEWFTYFYMDVWGNGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | SDISVAPGETARISCGEKSLGSRAVQWYQHRAGQAPSLIIYNNQDRPSGIPERFSGSPDSPFGTTATLTITSVEAGDEADYYCHIWDSRVPTKWVFGGGTTLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTECS | QMQLQESGPGLVKPSETLSLTCSVSGASISDSYWSWIRRSPGKGLEWIGYVHKSGDTNYSPSLKSRVNLSLDTSKNQVSLSLVAATAADSGKYYCARTLHGRRIYGIVAFNEWFTYFYMDVWGNGTQVTVS | DISVAPGETARISCGEKSLGSRAVQWYQHRAGQAPSLIIYNNQDRPSGIPERFSGSPDSPFGTTATLTITSVEAGDEADYYCHIWDSRVPTKWVFGGGTTLTVL | 15.933057 | 13.556445 | 235 | 211 | 131 | 104 | 131 | 104 | 53 | pgt121 fab heavy chain | pgt121 fab light chain | homo sapiens | homo sapiens | C | protein | envelope glycoprotein gp120 | human immunodeficiency virus 1 | 23 | 10 | 0.91 | HL | train |
9nby_H_G | 9nby | amc008 v4.2 sosip env trimer in complex with pgt121, vrc01 and 3bc315 fabs | no | immune system | 2025-02-14 | 2026-01-21 | electron microscopy | 3.16 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV4 | IGLV3 | H | G | QMQLQESGPGLVKPSETLSLTCSVSGASISDSYWSWIRRSPGKGLEWIGYVHKSGDTNYSPSLKSRVNLSLDTSKNQVSLSLVAATAADSGKYYCARTLHGRRIYGIVAFNEWFTYFYMDVWGNGTQVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC | SDISVAPGETARISCGEKSLGSRAVQWYQHRAGQAPSLIIYNNQDRPSGIPERFSGSPDSPFGTTATLTITSVEAGDEADYYCHIWDSRVPTKWVFGGGTTLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTECS | QMQLQESGPGLVKPSETLSLTCSVSGASISDSYWSWIRRSPGKGLEWIGYVHKSGDTNYSPSLKSRVNLSLDTSKNQVSLSLVAATAADSGKYYCARTLHGRRIYGIVAFNEWFTYFYMDVWGNGTQVTVS | DISVAPGETARISCGEKSLGSRAVQWYQHRAGQAPSLIIYNNQDRPSGIPERFSGSPDSPFGTTATLTITSVEAGDEADYYCHIWDSRVPTKWVFGGGTTLTVL | 15.846408 | 13.49264 | 235 | 211 | 131 | 104 | 131 | 104 | 51 | pgt121 fab heavy chain | pgt121 fab light chain | homo sapiens | homo sapiens | E | protein | envelope glycoprotein gp120 | human immunodeficiency virus 1 | 24 | 10 | 0.91 | HL | train |
9nby_P_O | 9nby | amc008 v4.2 sosip env trimer in complex with pgt121, vrc01 and 3bc315 fabs | no | immune system | 2025-02-14 | 2026-01-21 | electron microscopy | 3.16 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | P | O | QVQLVQSGGQMKKPGESMRISCRASGYEFIDCTLNWIRLAPGKRPEWMGWLKPRGGAVNYARPLQGRVTMTRDVYSDTAFLELRSLTVDDTAVYFCTRGKNCDYNWDFEHWGRGTPVIVSSPSTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC | EIVLTQSPGTLSLSPGETAIISCRTSQYGSLAWYQQRPGQAPRLVIYSGSTRAAGIPDRFSGSRWGPDYNLTISNLESGDFGVYYCQQYEFFGQGTKVQVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC | QVQLVQSGGQMKKPGESMRISCRASGYEFIDCTLNWIRLAPGKRPEWMGWLKPRGGAVNYARPLQGRVTMTRDVYSDTAFLELRSLTVDDTAVYFCTRGKNCDYNWDFEHWGRGTPVIVSSP | VLTQSPGTLSLSPGETAIISCRTSQYGSLAWYQQRPGQAPRLVIYSGSTRAAGIPDRFSGSRWGPDYNLTISNLESGDFGVYYCQQYEFFGQGTKVQVD | 14.17107 | 12.762013 | 224 | 210 | 122 | 99 | 122 | 99 | 37 | vrc01 fab heavy chain | vrc01 fab light chain | homo sapiens | homo sapiens | E | protein | envelope glycoprotein gp120 | human immunodeficiency virus 1 | 62 | 16 | 0.62 | HL | train |
9nby_S_T | 9nby | amc008 v4.2 sosip env trimer in complex with pgt121, vrc01 and 3bc315 fabs | no | immune system | 2025-02-14 | 2026-01-21 | electron microscopy | 3.16 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | S | T | QVQLVQSGAEMKDPGASVKVSCRASGYKFTDYYMHWVRQAPGQGLEWVGWVNTNGGFTKYGAKFQGRVTVTRDTSTNTVFLELSRLTFGDTAMYFCARPMRPVSHGIDYSGLFVFQFWGRGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | QSALTQPASVSASPGQSITISCSGTRSDVGGYDFVSWYQQHPGKVPKLIIYEVTKRPSGIPQRFSGSKSGNTASLTISGLQADDEADYYCCSYANYDKLILGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVQSGAEMKDPGASVKVSCRASGYKFTDYYMHWVRQAPGQGLEWVGWVNTNGGFTKYGAKFQGRVTVTRDTSTNTVFLELSRLTFGDTAMYFCARPMRPVSHGIDYSGLFVFQFWGRGTMVTVSS | ALTQPASVSASPGQSITISCSGTRSDVGGYDFVSWYQQHPGKVPKLIIYEVTKRPSGIPQRFSGSKSGNTASLTISGLQADDEADYYCCSYANYDKLILGGGTKLTVLG | 14.391667 | 13.553525 | 232 | 216 | 128 | 109 | 128 | 109 | 42 | 3bc315 fab heavy chain | 3bc315 fab light chain | homo sapiens | homo sapiens | F;E | protein;protein | envelope glycoprotein gp41;envelope glycoprotein gp120 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 46;12 | 19;7 | 0.86;1.0 | HL | train |
9nc3_I_J | 9nc3 | amc008 v4.2 sosip env trimer in complex with b12 and 3bc315 fabs | no | immune system | 2025-02-14 | 2026-01-21 | electron microscopy | 3.74 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGKV3 | I | J | QVQLVQSGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAEPKSC | EIVLTQSPGTLSLSPGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGASSYTFGQGTKLERKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC | QVQLVQSGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAEPKSC | EIVLTQSPGTLSLSPGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGASSYTFGQGTKLERKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC | 23.46144 | 22.915339 | 230 | 215 | 230 | 215 | 230 | 215 | 102 | b12 fab heavy chain | b12 fab light chain | homo sapiens | homo sapiens | A | protein | envelope glycoprotein gp120 | human immunodeficiency virus 1 | 84 | 28 | 0.72 | HL | train |
9nc3_K_L | 9nc3 | amc008 v4.2 sosip env trimer in complex with b12 and 3bc315 fabs | no | immune system | 2025-02-14 | 2026-01-21 | electron microscopy | 3.74 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | K | L | QVQLVQSGAEMKDPGASVKVSCRASGYKFTDYYMHWVRQAPGQGLEWVGWVNTNGGFTKYGAKFQGRVTVTRDTSTNTVFLELSRLTFGDTAMYFCARPMRPVSHGIDYSGLFVFQFWGRGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | QSALTQPASVSASPGQSITISCSGTRSDVGGYDFVSWYQQHPGKVPKLIIYEVTKRPSGIPQRFSGSKSGNTASLTISGLQADDEADYYCCSYANYDKLILGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QLVQSGAEMKDPGASVKVSCRASGYKFTDYYMHWVRQAPGQGLEWVGWVNTNGGFTKYGAKFQGRVTVTRDTSTNTVFLELSRLTFGDTAMYFCARPMRPVSHGIDYSGLFVFQFWGRGTMVTVSS | ALTQPASVSASPGQSITISCSGTRSDVGGYDFVSWYQQHPGKVPKLIIYEVTKRPSGIPQRFSGSKSGNTASLTISGLQADDEADYYCCSYANYDKLILGGGTKLTVLG | 14.312814 | 13.549764 | 232 | 216 | 126 | 109 | 126 | 109 | 42 | 3bc315 fab heavy chain | 3bc315 fab light chain | homo sapiens | homo sapiens | B;F;A | protein;protein;protein | envelope glycoprotein gp41;envelope glycoprotein gp41;envelope glycoprotein gp120 | human immunodeficiency virus 1;human immunodeficiency virus 1;human immunodeficiency virus 1 | 48;10;11 | 19;5;5 | 0.83;1.0;1.0 | HL | train |
9nc3_Q_R | 9nc3 | amc008 v4.2 sosip env trimer in complex with b12 and 3bc315 fabs | no | immune system | 2025-02-14 | 2026-01-21 | electron microscopy | 3.74 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | Q | R | QVQLVQSGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAEPKSC | EIVLTQSPGTLSLSPGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGASSYTFGQGTKLERKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC | VQLVQSGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVS | IVLTQSPGTLSLSPGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGASSYTFGQGTKLE | 14.681337 | 13.128919 | 230 | 215 | 125 | 105 | 125 | 105 | 43 | b12 fab heavy chain | b12 fab light chain | homo sapiens | homo sapiens | C | protein | envelope glycoprotein gp120 | human immunodeficiency virus 1 | 83 | 28 | 0.74 | HL | train |
9nc3_G_H | 9nc3 | amc008 v4.2 sosip env trimer in complex with b12 and 3bc315 fabs | no | immune system | 2025-02-14 | 2026-01-21 | electron microscopy | 3.74 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | FabH:FabL | IGHV1 | IGLV2 | G | H | QVQLVQSGAEMKDPGASVKVSCRASGYKFTDYYMHWVRQAPGQGLEWVGWVNTNGGFTKYGAKFQGRVTVTRDTSTNTVFLELSRLTFGDTAMYFCARPMRPVSHGIDYSGLFVFQFWGRGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | QSALTQPASVSASPGQSITISCSGTRSDVGGYDFVSWYQQHPGKVPKLIIYEVTKRPSGIPQRFSGSKSGNTASLTISGLQADDEADYYCCSYANYDKLILGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVQSGAEMKDPGASVKVSCRASGYKFTDYYMHWVRQAPGQGLEWVGWVNTNGGFTKYGAKFQGRVTVTRDTSTNTVFLELSRLTFGDTAMYFCARPMRPVSHGIDYSGLFVFQFWGRGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK | ALTQPASVSASPGQSITISCSGTRSDVGGYDFVSWYQQHPGKVPKLIIYEVTKRPSGIPQRFSGSKSGNTASLTISGLQADDEADYYCCSYANYDKLILGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP | 24.648499 | 21.192951 | 232 | 216 | 223 | 210 | 229 | 210 | 95 | 3bc315 fab heavy chain | 3bc315 fab light chain | homo sapiens | homo sapiens | D;C | protein;protein | envelope glycoprotein gp41;envelope glycoprotein gp120 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 41;10 | 17;5 | 0.89;1.0 | HL | train |
9nc3_M_N | 9nc3 | amc008 v4.2 sosip env trimer in complex with b12 and 3bc315 fabs | no | immune system | 2025-02-14 | 2026-01-21 | electron microscopy | 3.74 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV1 | IGKV3 | M | N | QVQLVQSGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKAEPKSC | EIVLTQSPGTLSLSPGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGASSYTFGQGTKLERKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLRSPVTKSFNRGEC | QVQLVQSGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSS | EIVLTQSPGTLSLSPGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGASSYTFGQGTKLE | 14.930025 | 13.222467 | 230 | 215 | 127 | 106 | 127 | 106 | 49 | b12 fab heavy chain | b12 fab light chain | homo sapiens | homo sapiens | E | protein | envelope glycoprotein gp120 | human immunodeficiency virus 1 | 86 | 27 | 0.71 | HL | train |
9nc3_O_P | 9nc3 | amc008 v4.2 sosip env trimer in complex with b12 and 3bc315 fabs | no | immune system | 2025-02-14 | 2026-01-21 | electron microscopy | 3.74 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | O | P | QVQLVQSGAEMKDPGASVKVSCRASGYKFTDYYMHWVRQAPGQGLEWVGWVNTNGGFTKYGAKFQGRVTVTRDTSTNTVFLELSRLTFGDTAMYFCARPMRPVSHGIDYSGLFVFQFWGRGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | QSALTQPASVSASPGQSITISCSGTRSDVGGYDFVSWYQQHPGKVPKLIIYEVTKRPSGIPQRFSGSKSGNTASLTISGLQADDEADYYCCSYANYDKLILGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | VQLVQSGAEMKDPGASVKVSCRASGYKFTDYYMHWVRQAPGQGLEWVGWVNTNGGFTKYGAKFQGRVTVTRDTSTNTVFLELSRLTFGDTAMYFCARPMRPVSHGIDYSGLFVFQFWGRGTMVTVS | ALTQPASVSASPGQSITISCSGTRSDVGGYDFVSWYQQHPGKVPKLIIYEVTKRPSGIPQRFSGSKSGNTASLTISGLQADDEADYYCCSYANYDKLILGGGTKLTV | 14.275476 | 13.366589 | 232 | 216 | 126 | 107 | 126 | 107 | 45 | 3bc315 fab heavy chain | 3bc315 fab light chain | homo sapiens | homo sapiens | F;E | protein;protein | envelope glycoprotein gp41;envelope glycoprotein gp120 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 38;11 | 16;6 | 0.89;1.0 | HL | train |
9nc6_G_I | 9nc6 | amc008 v4.2 sosip env trimer in complex with two 3bc315 fabs | no | immune system | 2025-02-14 | 2026-01-21 | electron microscopy | 3.52 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | G | I | QVQLVQSGAEMKDPGASVKVSCRASGYKFTDYYMHWVRQAPGQGLEWVGWVNTNGGFTKYGAKFQGRVTVTRDTSTNTVFLELSRLTFGDTAMYFCARPMRPVSHGIDYSGLFVFQFWGRGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | QSALTQPASVSASPGQSITISCSGTRSDVGGYDFVSWYQQHPGKVPKLIIYEVTKRPSGIPQRFSGSKSGNTASLTISGLQADDEADYYCCSYANYDKLILGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVQSGAEMKDPGASVKVSCRASGYKFTDYYMHWVRQAPGQGLEWVGWVNTNGGFTKYGAKFQGRVTVTRDTSTNTVFLELSRLTFGDTAMYFCARPMRPVSHGIDYSGLFVFQFWGRGTMVTVSS | ALTQPASVSASPGQSITISCSGTRSDVGGYDFVSWYQQHPGKVPKLIIYEVTKRPSGIPQRFSGSKSGNTASLTISGLQADDEADYYCCSYANYDKLILGGGTKLTVLG | 14.490973 | 13.566789 | 232 | 216 | 128 | 109 | 128 | 109 | 44 | 3bc315 fab heavy chain | 3bc315 fab light chain | homo sapiens | homo sapiens | B;D;A | protein;protein;protein | envelope glycoprotein gp41;envelope glycoprotein gp41;envelope glycoprotein gp120 | human immunodeficiency virus 1;human immunodeficiency virus 1;human immunodeficiency virus 1 | 45;12;12 | 20;7;7 | 0.95;1.0;1.0 | HL | train |
9nc6_H_L | 9nc6 | amc008 v4.2 sosip env trimer in complex with two 3bc315 fabs | no | immune system | 2025-02-14 | 2026-01-21 | electron microscopy | 3.52 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | H | L | QVQLVQSGAEMKDPGASVKVSCRASGYKFTDYYMHWVRQAPGQGLEWVGWVNTNGGFTKYGAKFQGRVTVTRDTSTNTVFLELSRLTFGDTAMYFCARPMRPVSHGIDYSGLFVFQFWGRGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | QSALTQPASVSASPGQSITISCSGTRSDVGGYDFVSWYQQHPGKVPKLIIYEVTKRPSGIPQRFSGSKSGNTASLTISGLQADDEADYYCCSYANYDKLILGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVQSGAEMKDPGASVKVSCRASGYKFTDYYMHWVRQAPGQGLEWVGWVNTNGGFTKYGAKFQGRVTVTRDTSTNTVFLELSRLTFGDTAMYFCARPMRPVSHGIDYSGLFVFQFWGRGTMVTVSS | ALTQPASVSASPGQSITISCSGTRSDVGGYDFVSWYQQHPGKVPKLIIYEVTKRPSGIPQRFSGSKSGNTASLTISGLQADDEADYYCCSYANYDKLILGGGTKLTVLG | 14.440687 | 13.517207 | 232 | 216 | 128 | 109 | 128 | 109 | 41 | 3bc315 fab heavy chain | 3bc315 fab light chain | homo sapiens | homo sapiens | F | protein | envelope glycoprotein gp41 | human immunodeficiency virus 1 | 46 | 19 | 0.86 | HL | train |
9nc8_H_L | 9nc8 | amc008 v4.2 sosip env trimer in complex with one 3bc315 fab | no | immune system | 2025-02-14 | 2026-01-21 | electron microscopy | 3.55 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VH:VL | IGHV1 | IGLV2 | H | L | QVQLVQSGAEMKDPGASVKVSCRASGYKFTDYYMHWVRQAPGQGLEWVGWVNTNGGFTKYGAKFQGRVTVTRDTSTNTVFLELSRLTFGDTAMYFCARPMRPVSHGIDYSGLFVFQFWGRGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD | QSALTQPASVSASPGQSITISCSGTRSDVGGYDFVSWYQQHPGKVPKLIIYEVTKRPSGIPQRFSGSKSGNTASLTISGLQADDEADYYCCSYANYDKLILGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS | QVQLVQSGAEMKDPGASVKVSCRASGYKFTDYYMHWVRQAPGQGLEWVGWVNTNGGFTKYGAKFQGRVTVTRDTSTNTVFLELSRLTFGDTAMYFCARPMRPVSHGIDYSGLFVFQFWGRGTMVTVSS | ALTQPASVSASPGQSITISCSGTRSDVGGYDFVSWYQQHPGKVPKLIIYEVTKRPSGIPQRFSGSKSGNTASLTISGLQADDEADYYCCSYANYDKLILGGGTKLTVLG | 14.47357 | 13.58708 | 232 | 216 | 128 | 109 | 128 | 109 | 42 | 3bc315 fab heavy chain | 3bc315 fab light chain | homo sapiens | homo sapiens | F;E | protein;protein | env polyprotein;envelope glycoprotein gp120 | human immunodeficiency virus 1;human immunodeficiency virus 1 | 46;10 | 19;6 | 0.9;1.0 | HL | train |
9lwc_N | 9lwc | cryo-em structure of epinephrine bound dopamine receptor 1 d1r-m74-minigs-gbeta1gamma2-nb35 complex | no | membrane protein/immune system | 2025-02-14 | 2026-02-18 | electron microscopy | 2.9 | N.A. | N.A. | N.A. | N.A. | 0 | auth_asym_id | VHH | IGHV3 | N.A. | N | N.A. | QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHH | N.A. | VQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV | N.A. | 13.09326 | 0 | 134 | 0 | 91 | 0 | 125 | 0 | 0 | nanobody 35 | N.A. | vicugna pacos | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
9ncd_H_L | 9ncd | crystal structure of the peanut allergen ara h 9 with bound fab igx-3103 and antifab nanobody | no | allergen | 2025-02-15 | 2026-02-18 | x-ray diffraction | 1.6 | 0.195 | 0.169 | 41661651 | 10.18176/jiaci.1143 | 0 | auth_asym_id | FabH:FabL | IGHV3 | IGKV1 | H | L | EVQLVESGGGLVQPGRSLRLACAASGFTFEDHALHWVRQVPGQGLEWVSGINWSGGSVAYADAVKGRFTISRNNANNSLYLEMISLRPEDTALYYCVRDSGAGFFASLDNWGLGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNG... | DIQVTQSPSSLSASVGDRVNISCRTSQSIGTFLNWFQQRPGKAPKLLISGASDLQSGVPSSISGSGSGTEFTLTISSLQPEDFAVYYCEQHYDVPFTFGGGTNIYVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | EVQLVESGGGLVQPGRSLRLACAASGFTFEDHALHWVRQVPGQGLEWVSGINWSGGSVAYADAVKGRFTISRNNANNSLYLEMISLRPEDTALYYCVRDSGAGFFASLDNWGLGVLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS | DIQVTQSPSSLSASVGDRVNISCRTSQSIGTFLNWFQQRPGKAPKLLISGASDLQSGVPSSISGSGSGTEFTLTISSLQPEDFAVYYCEQHYDVPFTFGGGTNIYVKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC | 23.09649 | 22.770094 | 451 | 214 | 223 | 214 | 223 | 214 | 97 | fab igx-3103 heavy chain | fab igx-3103 light chain | homo sapiens | homo sapiens | A | protein | non-specific lipid-transfer protein | arachis hypogaea | 39 | 18 | 0.9 | HL | train |
9ncd_K | 9ncd | crystal structure of the peanut allergen ara h 9 with bound fab igx-3103 and antifab nanobody | no | allergen | 2025-02-15 | 2026-02-18 | x-ray diffraction | 1.6 | 0.195 | 0.169 | 41661651 | 10.18176/jiaci.1143 | 0 | auth_asym_id | VHH | IGHV3 | N.A. | K | N.A. | GSQVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVSS | N.A. | SQVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVS | N.A. | 13.74248 | 0 | 123 | 0 | 121 | 0 | 121 | 0 | 0 | anti kappa light chain nanobody (antifab) | N.A. | lama glama | N.A. | N.A. | N.A. | N.A. | N.A. | 0 | 0 | 0 | H_only | train |
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