PDB_ID_chain
stringlengths
6
10
PDB_ID
stringlengths
4
4
Title
stringlengths
4
230
Mutation(s)
stringclasses
2 values
Classification
stringclasses
305 values
Deposit_date
stringdate
1976-03-17 00:00:00
2026-01-20 00:00:00
Release_date
stringdate
1976-05-19 00:00:00
2026-02-25 00:00:00
Method
stringclasses
5 values
Resolution
stringclasses
459 values
R_free
stringclasses
227 values
R_work
stringclasses
211 values
PMID
stringlengths
4
8
DOI
stringlengths
4
68
Model_index
int64
0
76
Asym_ID_type
stringclasses
2 values
Ab_type
stringclasses
30 values
H_subgroup
stringclasses
8 values
L_subgroup
stringclasses
19 values
H_chain_ID
stringclasses
60 values
L_chain_ID
stringclasses
58 values
H_fas_seq
stringlengths
4
919
L_fas_seq
stringlengths
4
627
H_filled_pdb_seq
stringlengths
4
896
L_filled_pdb_seq
stringlengths
4
523
H_mean_radius
float64
0
79.7
L_mean_radius
float64
0
84.3
H_fas_seq_len
int64
0
919
L_fas_seq_len
int64
0
627
H_pdb_seq_len
int64
0
879
L_pdb_seq_len
int64
0
523
H_filled_seq_len
int64
0
896
L_filled_seq_len
int64
0
523
HL_inf_res_num
int64
0
175
H_mol_name
stringlengths
2
331
L_mol_name
stringlengths
2
151
H_species
stringclasses
68 values
L_species
stringclasses
42 values
Ag_chain_ID(s)
stringclasses
279 values
Ag_type(s)
stringclasses
16 values
Ag_mol_name(s)
stringlengths
2
390
Ag_species
stringclasses
743 values
Ab_ag_inf_res_num
stringlengths
1
11
CDR_inf_res_num
stringclasses
444 values
CDR_inf_res_ratio
stringlengths
1
19
hl_label
stringclasses
3 values
split
stringclasses
1 value
7qcq_A
7qcq
vhh z70 in interaction with phf6 tau peptide
no
immune system
2021-11-25
2021-12-08
x-ray diffraction
1.7
0.214
0.195
35007758
10.1016/j.ymthe.2022.01.009
0
label_asym_id
VHH
IGHV3
N.A.
A
N.A.
MAEVQLQASGGVFVQSGGSLRLSCAASGATSTFDGMGWFRQAPGKEREFVSAISYEQGSYTYYADSVKGRFTISRDNSKNMVYLQMNSLRAEDTATYYCAPAYEGDLYAFDSYGGQGTQVTVSSAAAHHHHHH
N.A.
GGVFVQSGGSLRLSCAASGATSTFDGMGWFRQAPGKEREFVSAISYEQGSYTYYADSVKGRFTISRDNSKNMVYLQMNSLRAEDTATYYCAPAYEGDLYAFDSYGGQGTQVTVSS
N.A.
13.621462
0
133
0
110
0
115
0
0
vhh z70
N.A.
lama glama
N.A.
B
peptide
tau 301-312
lama glama
22
6
0.43
H_only
train
7syy_H_L
7syy
hendra virus g protein head domain in complex with cross-neutralizing murine antibody hah1.3
no
viral protein/immune system
2021-11-25
2022-06-01
x-ray diffraction
2.74
0.233
0.211
35617431
10.1073/pnas.2122769119
0
auth_asym_id
FabH:FabL
IGHV7
IGKV2
H
L
QIQLVQSGPELKKPGETVKISCTTSGYTFTNYGLNWVKQAPGKGFKWMAWINTYTGEPTYADDFKGRFAFSLETSASTTYLQINNLKNEDMSTYFCARSGYYDGLKAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC
DVLMIQTPLSLPVSLGDQASISCRSSQSLIHINGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPFTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNECVY
QIQLVQSGPELKKPGETVKISCTTSGYTFTNYGLNWVKQAPGKGFKWMAWINTYTGEPTYADDFKGRFAFSLETSASTTYLQINNLKNEDMSTYFCARSGYYDGLKAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC
DVLMIQTPLSLPVSLGDQASISCRSSQSLIHINGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPFTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE
23.062273
23.557894
223
221
218
218
223
218
98
antibody hah1.3 heavy chain
antibody hah1.3 light chain
mus musculus
mus musculus
A
protein
attachment glycoprotein
hendra henipavirus
46
20
0.77
HL
train
7syz_H_L
7syz
hendra virus g protein head domain in complex with cross-neutralizing murine antibody hah1.3
no
viral protein/immune system
2021-11-25
2022-06-08
x-ray diffraction
2.86
0.262
0.246
35617431
10.1073/pnas.2122769119
0
auth_asym_id
FabH:FabL
IGHV7
IGKV2
H
L
QIQLVQSGPELKKPGETVKISCTTSGYTFTNYGLNWVKQAPGKGFKWMAWINTYTGEPTYADDFKGRFAFSLETSASTTYLQINNLKNEDMSTYFCARSGYYDGLKAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC
DVLMIQTPLSLPVSLGDQASISCRSSQSLIHINGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPFTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNECVY
QIQLVQSGPELKKPGETVKISCTTSGYTFTNYGLNWVKQAPGKGFKWMAWINTYTGEPTYADDFKGRFAFSLETSASTTYLQINNLKNEDMSTYFCARSGYYDGLKAMDYWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDC
DVLMIQTPLSLPVSLGDQASISCRSSQSLIHINGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPFTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
23.499262
23.146116
223
221
223
219
223
219
99
antibody hah1.3 heavy chain
antibody hah1.3 light chain
mus musculus
mus musculus
A
protein
attachment glycoprotein
hendra henipavirus
42
18
0.82
HL
train
7w3z_H
7w3z
cryo-em structure of human gastrin releasing peptide receptor in complex with the agonist gastrin releasing peptide and gq heterotrimers
yes
membrane protein
2021-11-26
2023-02-22
electron microscopy
3
N.A.
N.A.
36724251
10.1073/pnas.2216230120
0
auth_asym_id
scFv
N.A.
N.A.
H
N.A.
MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFADVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKENLYFQGHHHHHHHHHH
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK
N.A.
17.553719
0
303
0
236
0
248
0
0
scfv16
N.A.
homo sapiens
N.A.
B;C
protein;protein
guanine nucleotide-binding protein g(q) subunit alpha;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
33;22
19;9
0.9;0.82
H_only
train
7t01_H_L
7t01
sars-cov-2 s-rbd + fab 54042-4
no
viral protein
2021-11-29
2022-04-13
electron microscopy
2.69
N.A.
N.A.
34592170
10.1016/j.celrep.2021.109784
0
auth_asym_id
VH:VL
IGHV2
IGKV1
H
L
QITLKESGPTLVKPTQTLTLTCTFSGFSLSTIGVGVSWIRQPPGKALDWLALIYWDDDKRYSPSLKSRLTVTMDTSKNQVVLTLTNMDPVDTATYFCAHGLFSSSDWGGLDVWGQGTTVT
DMQMTQSPSSLSASVGDRVTITCRASQSVFTYLNWYQQKPGKAPKLLIYAASRLQSGVPSRFRGSGSGTDFTLTISSLQPEDFATYYCQQSHSTPFIFGPGTKVDIK
QITLKESGPTLVKPTQTLTLTCTFSGFSLSTIGVGVSWIRQPPGKALDWLALIYWDDDKRYSPSLKSRLTVTMDTSKNQVVLTLTNMDPVDTATYFCAHGLFSSSDWGGLDVWGQGTTVT
DMQMTQSPSSLSASVGDRVTITCRASQSVFTYLNWYQQKPGKAPKLLIYAASRLQSGVPSRFRGSGSGTDFTLTISSLQPEDFATYYCQQSHSTPFIFGPGTKVDIK
13.963086
13.268864
120
107
120
107
120
107
46
54042-4 fab - heavy chain
54042-4 fab - light chain
homo sapiens
homo sapiens
A
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
33
18
0.95
HL
train
7t0f_H_L
7t0f
crystal structure of s25-39 fab in complex with 4-meo-kdooall
no
immune system
2021-11-29
2022-04-20
x-ray diffraction
2
0.261
0.214
35395245
10.1016/j.jbc.2022.101901
0
auth_asym_id
FabH:FabL
IGHV3
IGKV4
H
L
EVKLVESGGGLVQPGGSLRLACATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKAKGYTTEYSASVKGRFTISRDNSQSSLYLQMNTLRAEDSATYYCARDHDGYYERFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR
DIVMTQSPSSLAVSAGEKVTMNCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFALTISSVQAEDLAVYYCKQSYNLRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
EVKLVESGGGLVQPGGSLRLACATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKAKGYTTEYSASVKGRFTISRDNSQSSLYLQMNTLRAEDSATYYCARDHDGYYERFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVP
IVMTQSPSSLAVSAGEKVTMNCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFALTISSVQAEDLAVYYCKQSYNLRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
21.470081
23.84663
222
219
214
218
221
218
97
s25-39 fab heavy chain
s25-39 fab light chain
mus musculus
mus musculus
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7t0g_H_L
7t0g
crystal structure of s25-39 fab unliganded 1
no
immune system
2021-11-29
2022-04-20
x-ray diffraction
1.53
0.212
0.176
35395245
10.1016/j.jbc.2022.101901
0
auth_asym_id
FabH:FabL
IGHV3
IGKV4
H
L
EVKLVESGGGLVQPGGSLRLACATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKAKGYTTEYSASVKGRFTISRDNSQSSLYLQMNTLRAEDSATYYCARDHDGYYERFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR
DIVMTQSPSSLAVSAGEKVTMNCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFALTISSVQAEDLAVYYCKQSYNLRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
EVKLVESGGGLVQPGGSLRLACATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKAKGYTTEYSASVKGRFTISRDNSQSSLYLQMNTLRAEDSATYYCARDHDGYYERFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR
DIVMTQSPSSLAVSAGEKVTMNCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFALTISSVQAEDLAVYYCKQSYNLRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
21.18698
24.193153
222
219
215
219
222
219
102
s25-39 fab heavy chain
s25-39 fab light chain
mus musculus
mus musculus
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7t0h_H_L
7t0h
crystal structure of s25-39 fab unliganded 2
no
immune system
2021-11-29
2022-04-20
x-ray diffraction
1.3
0.2
0.148
35395245
10.1016/j.jbc.2022.101901
0
auth_asym_id
FabH:FabL
IGHV3
IGKV4
H
L
EVKLVESGGGLVQPGGSLRLACATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKAKGYTTEYSASVKGRFTISRDNSQSSLYLQMNTLRAEDSATYYCARDHDGYYERFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR
DIVMTQSPSSLAVSAGEKVTMNCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFALTISSVQAEDLAVYYCKQSYNLRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
EVKLVESGGGLVQPGGSLRLACATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKAKGYTTEYSASVKGRFTISRDNSQSSLYLQMNTLRAEDSATYYCARDHDGYYERFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR
DIVMTQSPSSLAVSAGEKVTMNCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFALTISSVQAEDLAVYYCKQSYNLRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
20.917309
24.27603
222
219
215
219
222
219
95
s25-39 fab heavy chain
s25-39 fab light chain
mus musculus
mus musculus
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7t0i_B_A
7t0i
crystal structure of s25-39 fab unliganded 3
no
immune system
2021-11-29
2022-04-20
x-ray diffraction
2.1
0.225
0.18
35395245
10.1016/j.jbc.2022.101901
0
auth_asym_id
FabH:FabL
IGHV3
IGKV4
B
A
EVKLVESGGGLVQPGGSLRLACATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKAKGYTTEYSASVKGRFTISRDNSQSSLYLQMNTLRAEDSATYYCARDHDGYYERFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR
DIVMTQSPSSLAVSAGEKVTMNCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFALTISSVQAEDLAVYYCKQSYNLRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
EVKLVESGGGLVQPGGSLRLACATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKAKGYTTEYSASVKGRFTISRDNSQSSLYLQMNTLRAEDSATYYCARDHDGYYERFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR
DIVMTQSPSSLAVSAGEKVTMNCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFALTISSVQAEDLAVYYCKQSYNLRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
21.583622
24.170847
222
219
214
219
222
219
88
s25-39 fab heavy chain
s25-39 fab light chain
mus musculus
mus musculus
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7t0i_D_C
7t0i
crystal structure of s25-39 fab unliganded 3
no
immune system
2021-11-29
2022-04-20
x-ray diffraction
2.1
0.225
0.18
35395245
10.1016/j.jbc.2022.101901
0
auth_asym_id
FabH:FabL
IGHV3
IGKV4
D
C
EVKLVESGGGLVQPGGSLRLACATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKAKGYTTEYSASVKGRFTISRDNSQSSLYLQMNTLRAEDSATYYCARDHDGYYERFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR
DIVMTQSPSSLAVSAGEKVTMNCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFALTISSVQAEDLAVYYCKQSYNLRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
EVKLVESGGGLVQPGGSLRLACATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKAKGYTTEYSASVKGRFTISRDNSQSSLYLQMNTLRAEDSATYYCARDHDGYYERFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR
DIVMTQSPSSLAVSAGEKVTMNCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFALTISSVQAEDLAVYYCKQSYNLRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
21.019867
24.120619
222
219
215
219
222
219
95
s25-39 fab heavy chain
s25-39 fab light chain
mus musculus
mus musculus
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7t0i_F_E
7t0i
crystal structure of s25-39 fab unliganded 3
no
immune system
2021-11-29
2022-04-20
x-ray diffraction
2.1
0.225
0.18
35395245
10.1016/j.jbc.2022.101901
0
auth_asym_id
FabH:FabL
IGHV3
IGKV4
F
E
EVKLVESGGGLVQPGGSLRLACATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKAKGYTTEYSASVKGRFTISRDNSQSSLYLQMNTLRAEDSATYYCARDHDGYYERFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR
DIVMTQSPSSLAVSAGEKVTMNCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFALTISSVQAEDLAVYYCKQSYNLRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
EVKLVESGGGLVQPGGSLRLACATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKAKGYTTEYSASVKGRFTISRDNSQSSLYLQMNTLRAEDSATYYCARDHDGYYERFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR
DIVMTQSPSSLAVSAGEKVTMNCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFALTISSVQAEDLAVYYCKQSYNLRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
20.793388
24.053997
222
219
210
219
222
219
83
s25-39 fab heavy chain
s25-39 fab light chain
mus musculus
mus musculus
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7t0i_H_L
7t0i
crystal structure of s25-39 fab unliganded 3
no
immune system
2021-11-29
2022-04-20
x-ray diffraction
2.1
0.225
0.18
35395245
10.1016/j.jbc.2022.101901
0
auth_asym_id
FabH:FabL
IGHV3
IGKV4
H
L
EVKLVESGGGLVQPGGSLRLACATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKAKGYTTEYSASVKGRFTISRDNSQSSLYLQMNTLRAEDSATYYCARDHDGYYERFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR
DIVMTQSPSSLAVSAGEKVTMNCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFALTISSVQAEDLAVYYCKQSYNLRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
EVKLVESGGGLVQPGGSLRLACATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKAKGYTTEYSASVKGRFTISRDNSQSSLYLQMNTLRAEDSATYYCARDHDGYYERFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR
DIVMTQSPSSLAVSAGEKVTMNCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFALTISSVQAEDLAVYYCKQSYNLRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
21.259964
24.126719
222
219
213
219
222
219
86
s25-39 fab heavy chain
s25-39 fab light chain
mus musculus
mus musculus
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7t0k_B_A
7t0k
crystal structure of s25-2 fab unliganded 4
no
immune system
2021-11-29
2022-04-20
x-ray diffraction
2
0.255
0.222
35395245
10.1016/j.jbc.2022.101901
0
auth_asym_id
FabH:FabL
IGHV3
IGKV4
B
A
EVKLVESGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRA
DIVMSQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTITSVQAEDLAVYYCKQSYNLRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
EVKLVESGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRA
DIVMSQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTITSVQAEDLAVYYCKQSYNLRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
22.406094
24.201836
223
219
223
219
223
219
112
s25-2 fab heavy chain
s25-2 fab light chain
mus musculus
mus musculus
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7t0k_D_C
7t0k
crystal structure of s25-2 fab unliganded 4
no
immune system
2021-11-29
2022-04-20
x-ray diffraction
2
0.255
0.222
35395245
10.1016/j.jbc.2022.101901
0
auth_asym_id
FabH:FabL
IGHV3
IGKV4
D
C
EVKLVESGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRA
DIVMSQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTITSVQAEDLAVYYCKQSYNLRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
EVKLVESGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR
DIVMSQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTITSVQAEDLAVYYCKQSYNLRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE
22.351732
24.047617
223
219
222
218
222
218
113
s25-2 fab heavy chain
s25-2 fab light chain
mus musculus
mus musculus
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7t0k_F_E
7t0k
crystal structure of s25-2 fab unliganded 4
no
immune system
2021-11-29
2022-04-20
x-ray diffraction
2
0.255
0.222
35395245
10.1016/j.jbc.2022.101901
0
auth_asym_id
FabH:FabL
IGHV3
IGKV4
F
E
EVKLVESGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRA
DIVMSQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTITSVQAEDLAVYYCKQSYNLRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
EVKLVESGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR
DIVMSQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTITSVQAEDLAVYYCKQSYNLRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
21.373514
24.205002
223
219
215
219
222
219
104
s25-2 fab heavy chain
s25-2 fab light chain
mus musculus
mus musculus
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7t0k_H_L
7t0k
crystal structure of s25-2 fab unliganded 4
no
immune system
2021-11-29
2022-04-20
x-ray diffraction
2
0.255
0.222
35395245
10.1016/j.jbc.2022.101901
0
auth_asym_id
FabH:FabL
IGHV3
IGKV4
H
L
EVKLVESGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRA
DIVMSQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTITSVQAEDLAVYYCKQSYNLRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
EVKLVESGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR
DIVMSQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTITSVQAEDLAVYYCKQSYNLRTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE
22.144154
23.998602
223
219
218
218
222
218
103
s25-2 fab heavy chain
s25-2 fab light chain
mus musculus
mus musculus
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7w53_E
7w53
cryo-em structure of the neuromedin u-bound neuromedin u receptor 1-gq protein complex
no
signaling protein
2021-11-29
2022-04-20
electron microscopy
3.2
N.A.
N.A.
35440625
10.1038/s41467-022-29683-w
0
auth_asym_id
scFv
N.A.
N.A.
E
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.191275
0
249
0
232
0
247
0
0
scfv16
N.A.
homo sapiens
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(q) subunit alpha;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
28;25
18;11
0.9;0.85
H_only
train
7w55_E
7w55
cryo-em structure of the neuromedin u-bound neuromedin u receptor 2-gq protein complex
no
signaling protein
2021-11-29
2022-04-20
electron microscopy
2.8
N.A.
N.A.
35440625
10.1038/s41467-022-29683-w
0
auth_asym_id
scFv
N.A.
N.A.
E
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.136812
0
248
0
231
0
246
0
0
scfv16
N.A.
homo sapiens
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(q) subunit alpha;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
33;26
20;11
0.91;0.79
H_only
train
7w56_E
7w56
cryo-em structure of the neuromedin s-bound neuromedin u receptor 1-gq protein complex
no
signaling protein
2021-11-29
2022-04-20
electron microscopy
2.9
N.A.
N.A.
35440625
10.1038/s41467-022-29683-w
0
auth_asym_id
scFv
N.A.
N.A.
E
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.235826
0
248
0
232
0
246
0
0
scfv16
N.A.
homo sapiens
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(q) subunit alpha;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
33;24
20;10
0.91;0.83
H_only
train
7szu_H_L
7szu
crystal structure of pepper rna aptamer in complex with hbc ligand and fab bl3-6
no
immune system/rna
2021-11-29
2022-07-06
x-ray diffraction
2.24
0.263
0.219
35759696
10.1021/acschembio.2c00290
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
EVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPSTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
EVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPSTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
22.275066
23.319466
224
213
224
213
224
213
102
bl3-6 fab heavy chain
bl3-6 fab light chain
mus musculus
mus musculus
R
RNA
rna aptamer
synthetic construct
32
21
0.88
HL
train
7t0l_H_L
7t0l
hla-b*27:05 in complex with the pan-hla-ia monoclonal antibody w6/32
yes
immune system
2021-11-29
2022-12-07
x-ray diffraction
3
0.252
0.198
39093013
10.4049/jimmunol.2400328
0
auth_asym_id
FabH:FabL
IGHV4
IGKV3
H
L
VQLKQSGPGLVQPSQSLSLTCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWSGGSTDYNAAFISRLSIRKDNSKSQVFFKMNSLQADDTAIYYCARTFTTSTSAWFAYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEP
SIVMTQTPKFLLVSAGDRVTITCKASQSVSNDVAWYQQKPGQSPKLLIYYASNRYTGVPDRFTGSGYGTDFTFTISTVQAEDLAVYFCQQDYSSPPWTFGGGTKLEIRRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFN
VQLKQSGPGLVQPSQSLSLTCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWSGGSTDYNAAFISRLSIRKDNSKSQVFFKMNSLQADDTAIYYCARTFTTSTSAWFAYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKK
SIVMTQTPKFLLVSAGDRVTITCKASQSVSNDVAWYQQKPGQSPKLLIYYASNRYTGVPDRFTGSGYGTDFTFTISTVQAEDLAVYFCQQDYSSPPWTFGGGTKLEIRRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFN
21.05372
23.56553
218
211
215
211
215
211
100
igg2a heavy chain
light chain kappa
mus musculus
mus musculus
A;B
protein;protein
mhc class i antigen;beta-2-microglobulin
homo sapiens;homo sapiens
41;29
13;17
0.59;0.89
HL
train
7t0l_G_K
7t0l
hla-b*27:05 in complex with the pan-hla-ia monoclonal antibody w6/32
yes
immune system
2021-11-29
2022-12-07
x-ray diffraction
3
0.252
0.198
39093013
10.4049/jimmunol.2400328
0
auth_asym_id
FabH:FabL
IGHV4
IGKV3
G
K
VQLKQSGPGLVQPSQSLSLTCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWSGGSTDYNAAFISRLSIRKDNSKSQVFFKMNSLQADDTAIYYCARTFTTSTSAWFAYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEP
SIVMTQTPKFLLVSAGDRVTITCKASQSVSNDVAWYQQKPGQSPKLLIYYASNRYTGVPDRFTGSGYGTDFTFTISTVQAEDLAVYFCQQDYSSPPWTFGGGTKLEIRRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFN
VQLKQSGPGLVQPSQSLSLTCTVSGFSLTSYGVHWVRQPPGKGLEWLGVIWSGGSTDYNAAFISRLSIRKDNSKSQVFFKMNSLQADDTAIYYCARTFTTSTSAWFAYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEP
SIVMTQTPKFLLVSAGDRVTITCKASQSVSNDVAWYQQKPGQSPKLLIYYASNRYTGVPDRFTGSGYGTDFTFTISTVQAEDLAVYFCQQDYSSPPWTFGGGTKLEIRRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFN
21.369137
23.575743
218
211
218
211
218
211
98
igg2a heavy chain
light chain kappa
mus musculus
mus musculus
D;E
protein;protein
mhc class i antigen;beta-2-microglobulin
homo sapiens;homo sapiens
46;27
15;16
0.6;1.0
HL
train
7t10_S
7t10
cryoem structure of somatostatin receptor 2 in complex with somatostatin-14 and gi3
yes
membrane protein/signaling protein
2021-11-30
2022-03-09
electron microscopy
2.5
N.A.
N.A.
35210615
10.1038/s41594-022-00727-5
0
auth_asym_id
scFv
N.A.
N.A.
S
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAHHHHHHHH
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.94774
0
259
0
232
0
246
0
0
scfv16
N.A.
mus musculus
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(i) subunit alpha-3;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
30;22
19;9
1.0;0.75
H_only
train
7t11_S
7t11
cryoem structure of somatostatin receptor 2 in complex with octreotide and gi3.
yes
membrane protein/signaling protein
2021-11-30
2022-03-09
electron microscopy
2.7
N.A.
N.A.
35210615
10.1038/s41594-022-00727-5
0
auth_asym_id
scFv
N.A.
N.A.
S
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAHHHHHHHH
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.813951
0
259
0
228
0
246
0
0
scfv16
N.A.
mus musculus
N.A.
B;A
protein;protein
guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(i) subunit alpha-3
homo sapiens;homo sapiens
21;30
9;17
0.75;0.94
H_only
train
7t0w_H_F
7t0w
complex of gaba-a synaptic receptor with autoimmune antibody fab115
no
membrane protein/immune system
2021-11-30
2022-07-13
electron microscopy
3
N.A.
N.A.
35803245
10.1016/j.cell.2022.06.025
0
label_asym_id
VH:VL
IGHV1
IGLV1
H
F
QVQLVQSGAEVKKPGASVKVSCKASGYTFISYDINWVRQATGQGLEWMGGMDPKSGNTGYAQKFQGRVTMTTNTAISTAYMELSSLRSEDTAVYYCVRGEQSYDRTGYSDWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHDYKDDDDKHHHHHH
QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVSWYQQLPGTAPKLLIYSTNQRPSGVPDRFSGSKSGTSASLAIGGLQSEDEADYYCAAWDDSLKRLVVFGGGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
VQLVQSGAEVKKPGASVKVSCKASGYTFISYDINWVRQATGQGLEWMGGMDPKSGNTGYAQKFQGRVTMTTNTAISTAYMELSSLRSEDTAVYYCVRGEQSYDRTGYSDWFDPWGQGTLVT
VLTQPPSASGTPGQRVTISCSGSSSNIGSNTVSWYQQLPGTAPKLLIYSTNQRPSGVPDRFSGSKSGTSASLAIGGLQSEDEADYYCAAWDDSLKRLVVFGGGTRLTVLG
14.51174
13.55231
246
217
121
110
121
110
48
fab115 heavy chain, igg1
fab115 light chain, igg1
homo sapiens
homo sapiens
A;B
protein;protein
gamma-aminobutyric acid receptor subunit beta-2;gamma-aminobutyric acid receptor subunit alpha-1
homo sapiens;homo sapiens
22;47
11;21
1.0;0.84
HL
train
7t0w_G_I
7t0w
complex of gaba-a synaptic receptor with autoimmune antibody fab115
no
membrane protein/immune system
2021-11-30
2022-07-13
electron microscopy
3
N.A.
N.A.
35803245
10.1016/j.cell.2022.06.025
0
label_asym_id
VH:VL
IGHV1
IGLV1
G
I
QVQLVQSGAEVKKPGASVKVSCKASGYTFISYDINWVRQATGQGLEWMGGMDPKSGNTGYAQKFQGRVTMTTNTAISTAYMELSSLRSEDTAVYYCVRGEQSYDRTGYSDWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHDYKDDDDKHHHHHH
QSVLTQPPSASGTPGQRVTISCSGSSSNIGSNTVSWYQQLPGTAPKLLIYSTNQRPSGVPDRFSGSKSGTSASLAIGGLQSEDEADYYCAAWDDSLKRLVVFGGGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
VQLVQSGAEVKKPGASVKVSCKASGYTFISYDINWVRQATGQGLEWMGGMDPKSGNTGYAQKFQGRVTMTTNTAISTAYMELSSLRSEDTAVYYCVRGEQSYDRTGYSDWFDPWGQGTLVT
VLTQPPSASGTPGQRVTISCSGSSSNIGSNTVSWYQQLPGTAPKLLIYSTNQRPSGVPDRFSGSKSGTSASLAIGGLQSEDEADYYCAAWDDSLKRLVVFGGGTRLTVLG
14.464951
13.500958
246
217
121
110
121
110
47
fab115 heavy chain, igg1
fab115 light chain, igg1
homo sapiens
homo sapiens
C;D
protein;protein
gamma-aminobutyric acid receptor subunit beta-2;gamma-aminobutyric acid receptor subunit alpha-1
homo sapiens;homo sapiens
22;47
11;20
1.0;0.83
HL
train
7qe5_B
7qe5
structure of the membrane domains of the sialic acid trap transporter hisiaqm from haemophilus influenzae
no
transport protein
2021-12-01
2022-07-27
electron microscopy
4.7
N.A.
N.A.
35927235
10.1038/s41467-022-31907-y
0
auth_asym_id
VH
IGHV3
N.A.
B
N.A.
MQILFQGDSHNEIPIAYGSRWIVITRGPAGHGQVQLVESGGGLVQTKTTTSVIDTTNDAQNLLTQAQTIVNTLKDYCPILIAKSSSSNGGTNNANTPSWQTAGGGKNSCATFGAEFSAASDMINNAQKIVQETQQLSANQPKNITQPHNLNLNSPSSLTALAQKMLKNAQSQAEILKLANQVESDFNKLSSGHLKDYIGKCDASAISSANMTMQNQKNNWGNGCAGVEETQSLLKTSAADFNNQTPQINQAQNLANTLIQELGNNPFRASGGGSGGGGSGKLSDTYEQLSRLLTNDNGTNSKTSAQAINQAVNNLNERAK...
N.A.
QLVESGGGLVQTKTTTSVIDTTNDAQNLLTQAQTIVNTLKDYCPILIAKSSSSNGGTNNANTPSWQTAGGGKNSCATFGAEFSAASDMINNAQKIVQETQQLSANQPKNITQPHNLNLNSPSSLTALAQKMLKNAQSQAEILKLANQVESDFNKLSSGHLKDYIGKCDASAISSANMTMQNQKNNWGNGCAGVEETQSLLKTSAADFNNQTPQINQAQNLANTLIQELGNNPFRASGGGSGGGGSGKLSDTYEQLSRLLTNDNGTNSKTSAQAINQAVNNLNERAKTLAGGTTNSPAYQATLLALRSVLGLWNSMGYAVI...
N.A.
14.301065
0
576
0
124
0
529
0
0
megabody3
N.A.
vicugna pacos
N.A.
A
protein
sialic acid trap transporter permease protein siat
haemophilus influenzae
55
19
0.83
H_only
train
7t1x_A_B
7t1x
crystal structure of human fab a194-01 in complex with its synthetic heptasaccharide ara6-man epitope (bsi110888)
no
immune system
2021-12-02
2022-12-07
x-ray diffraction
2.6
0.216
0.159
N.A.
N.A.
0
label_asym_id
FabH:FabL
IGHV3
IGKV3
A
B
QVQLLESGGGVVRPGGSLRLSCAASGFNFEDFGMSWVRQAPGKGLEWVSSISWNGANIGYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAIDWYRDDYYKMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTH
EIVMTQSPATLSVSPGERATLSCRASRSIRSALAWYQHKPGQAPRLLIFGASTRATGIPARFSGSGSGTDFTLTVSSIRSEDSAVYYCQQYDFWYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLLESGGGVVRPGGSLRLSCAASGFNFEDFGMSWVRQAPGKGLEWVSSISWNGANIGYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAIDWYRDDYYKMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
EIVMTQSPATLSVSPGERATLSCRASRSIRSALAWYQHKPGQAPRLLIFGASTRATGIPARFSGSGSGTDFTLTVSSIRSEDSAVYYCQQYDFWYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
20.781391
23.287878
228
213
216
212
222
212
95
fab a194-01 heavy chain
fab a194-01 light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7t1x_C_D
7t1x
crystal structure of human fab a194-01 in complex with its synthetic heptasaccharide ara6-man epitope (bsi110888)
no
immune system
2021-12-02
2022-12-07
x-ray diffraction
2.6
0.216
0.159
N.A.
N.A.
0
label_asym_id
FabH:FabL
IGHV3
IGKV3
C
D
QVQLLESGGGVVRPGGSLRLSCAASGFNFEDFGMSWVRQAPGKGLEWVSSISWNGANIGYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAIDWYRDDYYKMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTH
EIVMTQSPATLSVSPGERATLSCRASRSIRSALAWYQHKPGQAPRLLIFGASTRATGIPARFSGSGSGTDFTLTVSSIRSEDSAVYYCQQYDFWYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLLESGGGVVRPGGSLRLSCAASGFNFEDFGMSWVRQAPGKGLEWVSSISWNGANIGYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAIDWYRDDYYKMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
EIVMTQSPATLSVSPGERATLSCRASRSIRSALAWYQHKPGQAPRLLIFGASTRATGIPARFSGSGSGTDFTLTVSSIRSEDSAVYYCQQYDFWYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
20.71258
23.370708
228
213
217
213
222
213
94
fab a194-01 heavy chain
fab a194-01 light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7t1x_E_F
7t1x
crystal structure of human fab a194-01 in complex with its synthetic heptasaccharide ara6-man epitope (bsi110888)
no
immune system
2021-12-02
2022-12-07
x-ray diffraction
2.6
0.216
0.159
N.A.
N.A.
0
label_asym_id
FabH:FabL
IGHV3
IGKV3
E
F
QVQLLESGGGVVRPGGSLRLSCAASGFNFEDFGMSWVRQAPGKGLEWVSSISWNGANIGYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAIDWYRDDYYKMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTH
EIVMTQSPATLSVSPGERATLSCRASRSIRSALAWYQHKPGQAPRLLIFGASTRATGIPARFSGSGSGTDFTLTVSSIRSEDSAVYYCQQYDFWYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLLESGGGVVRPGGSLRLSCAASGFNFEDFGMSWVRQAPGKGLEWVSSISWNGANIGYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAIDWYRDDYYKMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
EIVMTQSPATLSVSPGERATLSCRASRSIRSALAWYQHKPGQAPRLLIFGASTRATGIPARFSGSGSGTDFTLTVSSIRSEDSAVYYCQQYDFWYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
20.767027
23.213224
228
213
215
212
222
212
94
fab a194-01 heavy chain
fab a194-01 light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7t1x_G_H
7t1x
crystal structure of human fab a194-01 in complex with its synthetic heptasaccharide ara6-man epitope (bsi110888)
no
immune system
2021-12-02
2022-12-07
x-ray diffraction
2.6
0.216
0.159
N.A.
N.A.
0
label_asym_id
FabH:FabL
IGHV3
IGKV3
G
H
QVQLLESGGGVVRPGGSLRLSCAASGFNFEDFGMSWVRQAPGKGLEWVSSISWNGANIGYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAIDWYRDDYYKMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTH
EIVMTQSPATLSVSPGERATLSCRASRSIRSALAWYQHKPGQAPRLLIFGASTRATGIPARFSGSGSGTDFTLTVSSIRSEDSAVYYCQQYDFWYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLLESGGGVVRPGGSLRLSCAASGFNFEDFGMSWVRQAPGKGLEWVSSISWNGANIGYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAIDWYRDDYYKMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
EIVMTQSPATLSVSPGERATLSCRASRSIRSALAWYQHKPGQAPRLLIFGASTRATGIPARFSGSGSGTDFTLTVSSIRSEDSAVYYCQQYDFWYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
21.045141
23.241789
228
213
217
212
222
212
95
fab a194-01 heavy chain
fab a194-01 light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7t1x_I_J
7t1x
crystal structure of human fab a194-01 in complex with its synthetic heptasaccharide ara6-man epitope (bsi110888)
no
immune system
2021-12-02
2022-12-07
x-ray diffraction
2.6
0.216
0.159
N.A.
N.A.
0
label_asym_id
FabH:FabL
IGHV3
IGKV3
I
J
QVQLLESGGGVVRPGGSLRLSCAASGFNFEDFGMSWVRQAPGKGLEWVSSISWNGANIGYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAIDWYRDDYYKMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTH
EIVMTQSPATLSVSPGERATLSCRASRSIRSALAWYQHKPGQAPRLLIFGASTRATGIPARFSGSGSGTDFTLTVSSIRSEDSAVYYCQQYDFWYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLLESGGGVVRPGGSLRLSCAASGFNFEDFGMSWVRQAPGKGLEWVSSISWNGANIGYVDSVKGRFTISRDNAKNSLYLQMNSLRAEDTALYYCAIDWYRDDYYKMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
EIVMTQSPATLSVSPGERATLSCRASRSIRSALAWYQHKPGQAPRLLIFGASTRATGIPARFSGSGSGTDFTLTVSSIRSEDSAVYYCQQYDFWYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
20.78602
23.270401
228
213
215
212
221
212
93
fab a194-01 heavy chain
fab a194-01 light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7qez_E_F
7qez
crystal structure of the sars-cov-2 rbd in complex with the ultrapotent antibody cv2.1169 and cr3022
yes
viral protein
2021-12-03
2022-05-18
x-ray diffraction
2.89
0.281
0.239
35704748
10.1084/jem.20220638
0
auth_asym_id
FabH:FabL
IGHV5
IGKV4
E
F
QMQLVQSGTEVKKPGESLKISCKGSGYGFITYWIGWVRQMPGKGLEWMGIIYPGDSETRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCAGGSGISTPMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCFEDDDDK
DIQLTQSPDSLAVSLGERATINCKSSQSVLYSSINKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS
QMQLVQSGTEVKKPGESLKISCKGSGYGFITYWIGWVRQMPGKGLEWMGIIYPGDSETRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCAGGSGISTPMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
DIQLTQSPDSLAVSLGERATINCKSSQSVLYSSINKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYSTPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
22.015783
23.47969
229
221
214
218
221
218
105
cr3022 heavy chain
cr3022 light chain
homo sapiens
homo sapiens
A
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
54
23
0.79
HL
train
7qez_H_L
7qez
crystal structure of the sars-cov-2 rbd in complex with the ultrapotent antibody cv2.1169 and cr3022
yes
viral protein
2021-12-03
2022-05-18
x-ray diffraction
2.89
0.281
0.239
35704748
10.1084/jem.20220638
0
auth_asym_id
VH:VL
IGHV1
IGKV3
H
L
QVQLVQSGPEVKKPGTSVKVSCKASGFTFTTSAVQWVRQARGQRLEWIGWIVVGSGNTNYAQKFQERVTITRDMSTTTAYMELSSLRSEDTAVYYCAAPYCSGGTCLDGFDIWGQGTMVTVSSASTTSPKVFPLSLCSTQPDGNVVIACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCP
EIVLTQSPGTLSLSPGERATLSCRASQSVSRSYLAWYQQKPGQAPRLLIYSASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVQSGPEVKKPGTSVKVSCKASGFTFTTSAVQWVRQARGQRLEWIGWIVVGSGNTNYAQKFQERVTITRDMSTTTAYMELSSLRSEDTAVYYCAAPYCSGGTCLDGFDIWGQGTMVTVSS
EIVLTQSPGTLSLSPGERATLSCRASQSVSRSYLAWYQQKPGQAPRLLIYSASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPWTFGQGTKVEIK
14.113409
13.220254
225
215
123
108
123
108
41
cv2.1169 iga heavy chain
cv2.1169 light chain
homo sapiens
homo sapiens
A
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
41
20
0.8
HL
train
7qf0_H_L
7qf0
crystal structure of the sars-cov-2 rbd in complex with the human antibody cv2.2325
yes
viral protein
2021-12-03
2022-05-18
x-ray diffraction
2.3
0.221
0.185
35704748
10.1084/jem.20220638
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
EVQLVESGGGLIQPGGSLRLSCAASGFTVSRNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDGDYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
DIQMTQSPSFLSASVGDRVTITCRASQGISSFLAWYQQKPGKAPKLLIYGASTLQSGVTSRFSGSGSGTEFTLTISSLQPEDFATYYCQRLDSYPPITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
EVQLVESGGGLIQPGGSLRLSCAASGFTVSRNYMSWVRQAPGKGLEWVSVIYSGGSTFYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDGDYYGMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS
DIQMTQSPSFLSASVGDRVTITCRASQGISSFLAWYQQKPGKAPKLLIYGASTLQSGVTSRFSGSGSGTEFTLTISSLQPEDFATYYCQRLDSYPPITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
22.899961
22.347736
229
214
216
214
219
214
101
cv2.2325 heavy chain
cv2.2325 light chain
homo sapiens
homo sapiens
A
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
69
23
0.68
HL
train
7qf1_C_B
7qf1
crystal structure of the sars-cov-2 rbd in complex with the human antibody cv2.6264
yes
viral protein
2021-12-03
2022-05-18
x-ray diffraction
2.8
0.254
0.229
35704748
10.1084/jem.20220638
0
auth_asym_id
FabH:FabL
IGHV1
IGKV1
C
B
QVQLVQSEAEVKKPGSSVKVSCKASGGTYSSYAISWVRQAPGQGLEWMGGIIPILGIANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARLPYYYDSSGYYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSNPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
VQLVQSEAEVKKPGSSVKVSCKASGGTYSSYAISWVRQAPGQGLEWMGGIIPILGIANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARLPYYYDSSGYYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSNPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
22.241472
22.9354
236
213
219
213
224
213
92
cv2.6264 heavy chain
cv2.6264 light chain
homo sapiens
homo sapiens
A
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
35
16
0.8
HL
train
7qf1_E_D
7qf1
crystal structure of the sars-cov-2 rbd in complex with the human antibody cv2.6264
yes
viral protein
2021-12-03
2022-05-18
x-ray diffraction
2.8
0.254
0.229
35704748
10.1084/jem.20220638
0
auth_asym_id
FabH:FabL
IGHV1
IGKV1
E
D
QVQLVQSEAEVKKPGSSVKVSCKASGGTYSSYAISWVRQAPGQGLEWMGGIIPILGIANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARLPYYYDSSGYYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSNPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
VQLVQSEAEVKKPGSSVKVSCKASGGTYSSYAISWVRQAPGQGLEWMGGIIPILGIANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARLPYYYDSSGYYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
DIQMTQSPSSLSASVGDRVTITCRASQSISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSNPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
22.42922
22.914944
236
213
219
213
224
213
93
cv2.6264 heavy chain
cv2.6264 light chain
homo sapiens
homo sapiens
F
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
37
17
0.77
HL
train
7t25_A_B
7t25
ospa-fab 319-44 complex structure
no
immune system
2021-12-03
2022-12-14
x-ray diffraction
2.25
0.233
0.191
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV5
IGKV3
A
B
EMQLVQSGAEVKKPGESLKISCKGSGYIFATYWIGWVRQMPGKGLEWMGIIYPNDSDTRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAMYYCARTRWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTH
EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
MQLVQSGAEVKKPGESLKISCKGSGYIFATYWIGWVRQMPGKGLEWMGIIYPNDSDTRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAMYYCARTRWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
22.02546
22.863903
223
215
208
213
215
213
86
319-44 fab heavy chain
319-44 fab light chain
homo sapiens
homo sapiens
C
protein
outer surface protein a
borreliella burgdorferi b31
28
14
0.88
HL
train
7t25_H_L
7t25
ospa-fab 319-44 complex structure
no
immune system
2021-12-03
2022-12-14
x-ray diffraction
2.25
0.233
0.191
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV5
IGKV3
H
L
EMQLVQSGAEVKKPGESLKISCKGSGYIFATYWIGWVRQMPGKGLEWMGIIYPNDSDTRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAMYYCARTRWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTH
EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
MQLVQSGAEVKKPGESLKISCKGSGYIFATYWIGWVRQMPGKGLEWMGIIYPNDSDTRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAMYYCARTRWYFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCD
EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
22.529621
22.739311
223
215
212
214
219
214
88
319-44 fab heavy chain
319-44 fab light chain
homo sapiens
homo sapiens
E
protein
outer surface protein a
borreliella burgdorferi b31
28
14
0.88
HL
train
7w7e_H
7w7e
cryo-em structure of the alpha2a adrenergic receptor goa signaling complex bound to a biased agonist
no
membrane protein
2021-12-04
2022-09-28
electron microscopy
3.4
N.A.
N.A.
36173843
10.1126/science.abn7065
0
auth_asym_id
scFv
N.A.
N.A.
H
N.A.
MLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFADVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKGSLEVLFQGPAAAHHHHHHHH
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELK
N.A.
17.683697
0
307
0
232
0
248
0
0
scfv
N.A.
mus musculus
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(o) subunit alpha;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
33;22
20;8
0.91;0.73
H_only
train
7t3d_C_D
7t3d
cryoem map of anchor 222-1c06 fab and lateral patch 2b05 fab binding h1 ha
yes
viral protein/immune system
2021-12-07
2022-01-12
electron microscopy
3.38
N.A.
N.A.
34942633
10.1038/s41586-021-04356-8
0
auth_asym_id
VH:VL
IGHV3
IGKV1
C
D
VQLLESGGGLVQPGGSLSLSCAASGFTFSSFAMSWVRQAPVKGLEWVSMISAGGGNTYYADSVKGRFTISRDNSKSTLYLQMSSLTAEDTAVYYCAKSDSSGFQYGRREFWGQGTLVTVS
DIQMTQSPSSLSAFVGDRVTIACQASQDIRIHLNWYQQKPGKAPKLLIYDASNLEAGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQHYHNLPRTFGGGTKVEIK
VQLLESGGGLVQPGGSLSLSCAASGFTFSSFAMSWVRQAPVKGLEWVSMISAGGGNTYYADSVKGRFTISRDNSKSTLYLQMSSLTAEDTAVYYCAKSDSSGFQYGRREFWGQGTLVTVS
DIQMTQSPSSLSAFVGDRVTIACQASQDIRIHLNWYQQKPGKAPKLLIYDASNLEAGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQHYHNLPRTFGGGTKVEIK
13.533642
13.226017
120
107
120
107
120
107
41
2b05 mab heavy chain
2b05 mab light chain
homo sapiens
homo sapiens
A
protein
hemagglutinin ha1 chain
influenza a virus (a/california/04/2009(h1n1))
46
21
0.91
HL
train
7t3d_H_L
7t3d
cryoem map of anchor 222-1c06 fab and lateral patch 2b05 fab binding h1 ha
yes
viral protein/immune system
2021-12-07
2022-01-12
electron microscopy
3.38
N.A.
N.A.
34942633
10.1038/s41586-021-04356-8
0
auth_asym_id
VH:VL
IGHV3
IGKV3
H
L
EVQLVESGGDLVQPGGSLRLSCVVSGFTFSTYSMNWVRQAPGKGLEWVSYISSSSLSRYYADSVKGRFTISRDNAKNSLSLQLNSLRAEDTAVYYCVRGSITWPTEYYLDYWGQGTLVTVSS
EIVMTQSPATLSVSPGERATLSCRASQTIRSDLAWYQQKPGQPPRLIIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDSAVYFCQQYNNWPPLTFGGGTKVEIK
QLVESGGDLVQPGGSLRLSCVVSGFTFSTYSMNWVRQAPGKGLEWVSYISSSSLSRYYADSVKGRFTISRDNAKNSLSLQLNSLRAEDTAVYYCVRGSITWPTEYYLDYW
EIVMTQSPATLSVSPGERATLSCRASQTIRSDLAWYQQKPGQPPRLIIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDSAVYFCQQYNNWPPLTFGGGTKVEIK
13.436555
13.228701
122
108
110
108
110
108
38
222-1c06 mab heavy chain
222-1c06 mab light chain
homo sapiens
homo sapiens
A;B
protein;protein
hemagglutinin ha1 chain;hemagglutinin ha2 chain
influenza a virus (a/california/04/2009(h1n1));influenza a virus (a/california/04/2009(h1n1))
12;32
5;12
0.71;0.86
HL
train
7t3d_J_M
7t3d
cryoem map of anchor 222-1c06 fab and lateral patch 2b05 fab binding h1 ha
yes
viral protein/immune system
2021-12-07
2022-01-12
electron microscopy
3.38
N.A.
N.A.
34942633
10.1038/s41586-021-04356-8
0
auth_asym_id
VH:VL
IGHV3
IGKV1
J
M
VQLLESGGGLVQPGGSLSLSCAASGFTFSSFAMSWVRQAPVKGLEWVSMISAGGGNTYYADSVKGRFTISRDNSKSTLYLQMSSLTAEDTAVYYCAKSDSSGFQYGRREFWGQGTLVTVS
DIQMTQSPSSLSAFVGDRVTIACQASQDIRIHLNWYQQKPGKAPKLLIYDASNLEAGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQHYHNLPRTFGGGTKVEIK
VQLLESGGGLVQPGGSLSLSCAASGFTFSSFAMSWVRQAPVKGLEWVSMISAGGGNTYYADSVKGRFTISRDNSKSTLYLQMSSLTAEDTAVYYCAKSDSSGFQYGRREFWGQGTLVTVS
DIQMTQSPSSLSAFVGDRVTIACQASQDIRIHLNWYQQKPGKAPKLLIYDASNLEAGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQHYHNLPRTFGGGTKVEIK
13.533636
13.226008
120
107
120
107
120
107
41
2b05 mab heavy chain
2b05 mab light chain
homo sapiens
homo sapiens
E
protein
hemagglutinin ha1 chain
influenza a virus (a/california/04/2009(h1n1))
46
21
0.91
HL
train
7t3d_O_Q
7t3d
cryoem map of anchor 222-1c06 fab and lateral patch 2b05 fab binding h1 ha
yes
viral protein/immune system
2021-12-07
2022-01-12
electron microscopy
3.38
N.A.
N.A.
34942633
10.1038/s41586-021-04356-8
0
auth_asym_id
VH:VL
IGHV3
IGKV3
O
Q
EVQLVESGGDLVQPGGSLRLSCVVSGFTFSTYSMNWVRQAPGKGLEWVSYISSSSLSRYYADSVKGRFTISRDNAKNSLSLQLNSLRAEDTAVYYCVRGSITWPTEYYLDYWGQGTLVTVSS
EIVMTQSPATLSVSPGERATLSCRASQTIRSDLAWYQQKPGQPPRLIIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDSAVYFCQQYNNWPPLTFGGGTKVEIK
QLVESGGDLVQPGGSLRLSCVVSGFTFSTYSMNWVRQAPGKGLEWVSYISSSSLSRYYADSVKGRFTISRDNAKNSLSLQLNSLRAEDTAVYYCVRGSITWPTEYYLDYW
EIVMTQSPATLSVSPGERATLSCRASQTIRSDLAWYQQKPGQPPRLIIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDSAVYFCQQYNNWPPLTFGGGTKVEIK
13.436569
13.22869
122
108
110
108
110
108
38
222-1c06 mab heavy chain
222-1c06 mab light chain
homo sapiens
homo sapiens
E;G
protein;protein
hemagglutinin ha1 chain;hemagglutinin ha2 chain
influenza a virus (a/california/04/2009(h1n1));influenza a virus (a/california/04/2009(h1n1))
12;32
5;12
0.71;0.86
HL
train
7t3d_K_N
7t3d
cryoem map of anchor 222-1c06 fab and lateral patch 2b05 fab binding h1 ha
yes
viral protein/immune system
2021-12-07
2022-01-12
electron microscopy
3.38
N.A.
N.A.
34942633
10.1038/s41586-021-04356-8
0
auth_asym_id
VH:VL
IGHV3
IGKV1
K
N
VQLLESGGGLVQPGGSLSLSCAASGFTFSSFAMSWVRQAPVKGLEWVSMISAGGGNTYYADSVKGRFTISRDNSKSTLYLQMSSLTAEDTAVYYCAKSDSSGFQYGRREFWGQGTLVTVS
DIQMTQSPSSLSAFVGDRVTIACQASQDIRIHLNWYQQKPGKAPKLLIYDASNLEAGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQHYHNLPRTFGGGTKVEIK
VQLLESGGGLVQPGGSLSLSCAASGFTFSSFAMSWVRQAPVKGLEWVSMISAGGGNTYYADSVKGRFTISRDNSKSTLYLQMSSLTAEDTAVYYCAKSDSSGFQYGRREFWGQGTLVTVS
DIQMTQSPSSLSAFVGDRVTIACQASQDIRIHLNWYQQKPGKAPKLLIYDASNLEAGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQHYHNLPRTFGGGTKVEIK
13.533638
13.226016
120
107
120
107
120
107
41
2b05 mab heavy chain
2b05 mab light chain
homo sapiens
homo sapiens
F
protein
hemagglutinin ha1 chain
influenza a virus (a/california/04/2009(h1n1))
46
21
0.91
HL
train
7t3d_P_R
7t3d
cryoem map of anchor 222-1c06 fab and lateral patch 2b05 fab binding h1 ha
yes
viral protein/immune system
2021-12-07
2022-01-12
electron microscopy
3.38
N.A.
N.A.
34942633
10.1038/s41586-021-04356-8
0
auth_asym_id
VH:VL
IGHV3
IGKV3
P
R
EVQLVESGGDLVQPGGSLRLSCVVSGFTFSTYSMNWVRQAPGKGLEWVSYISSSSLSRYYADSVKGRFTISRDNAKNSLSLQLNSLRAEDTAVYYCVRGSITWPTEYYLDYWGQGTLVTVSS
EIVMTQSPATLSVSPGERATLSCRASQTIRSDLAWYQQKPGQPPRLIIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDSAVYFCQQYNNWPPLTFGGGTKVEIK
QLVESGGDLVQPGGSLRLSCVVSGFTFSTYSMNWVRQAPGKGLEWVSYISSSSLSRYYADSVKGRFTISRDNAKNSLSLQLNSLRAEDTAVYYCVRGSITWPTEYYLDYW
EIVMTQSPATLSVSPGERATLSCRASQTIRSDLAWYQQKPGQPPRLIIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDSAVYFCQQYNNWPPLTFGGGTKVEIK
13.436559
13.22869
122
108
110
108
110
108
38
222-1c06 mab heavy chain
222-1c06 mab light chain
homo sapiens
homo sapiens
F;I
protein;protein
hemagglutinin ha1 chain;hemagglutinin ha2 chain
influenza a virus (a/california/04/2009(h1n1));influenza a virus (a/california/04/2009(h1n1))
12;32
5;12
0.71;0.86
HL
train
7t3m_D
7t3m
sars-cov-2 s (spike glycoprotein) d614g with three (3) rbds up, bound to antibody 2-7 scfv, composite map
yes
viral protein/immune system
2021-12-08
2022-08-24
electron microscopy
3
N.A.
N.A.
36192374
10.1038/s41467-022-33030-4
0
auth_asym_id
scFv
N.A.
N.A.
D
N.A.
MKHLWFFLLLVAAAQPAMAQVTLKESGPTRVKPTQTLTLTCTFSGFSLSTTGVGVGWIRQPPGKALEWLALIYWNDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCARISGSGYFYPFDIWGQGTTVTVSSGGGGSGGGGSGGGGSNFMLTQPHSVSESPGKTVTISCTRSSGSIASNYVQWYQQRPGSSPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLKAEDEADYYCQSYDSSSLWVFGGGTKLTVLGQPKAAPSAAALEHHHHHH
N.A.
QVTLKESGPTRVKPTQTLTLTCTFSGFSLSTTGVGVGWIRQPPGKALEWLALIYWNDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCARISGSGYFYPFDIWGQGTTVTVSSGGGGSGGGGSGGGGSNFMLTQPHSVSESPGKTVTISCTRSSGSIASNYVQWYQQRPGSSPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLKAEDEADYYCQSYDSSSLWVFGGGTKLTVL
N.A.
17.955263
0
286
0
232
0
248
0
0
antibody 2-7 scfv
N.A.
escherichia coli
N.A.
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
39
16
0.8
H_only
train
7t3m_I
7t3m
sars-cov-2 s (spike glycoprotein) d614g with three (3) rbds up, bound to antibody 2-7 scfv, composite map
yes
viral protein/immune system
2021-12-08
2022-08-24
electron microscopy
3
N.A.
N.A.
36192374
10.1038/s41467-022-33030-4
0
auth_asym_id
scFv
N.A.
N.A.
I
N.A.
MKHLWFFLLLVAAAQPAMAQVTLKESGPTRVKPTQTLTLTCTFSGFSLSTTGVGVGWIRQPPGKALEWLALIYWNDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCARISGSGYFYPFDIWGQGTTVTVSSGGGGSGGGGSGGGGSNFMLTQPHSVSESPGKTVTISCTRSSGSIASNYVQWYQQRPGSSPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLKAEDEADYYCQSYDSSSLWVFGGGTKLTVLGQPKAAPSAAALEHHHHHH
N.A.
QVTLKESGPTRVKPTQTLTLTCTFSGFSLSTTGVGVGWIRQPPGKALEWLALIYWNDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCARISGSGYFYPFDIWGQGTTVTVSSGGGGSGGGGSGGGGSNFMLTQPHSVSESPGKTVTISCTRSSGSIASNYVQWYQQRPGSSPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLKAEDEADYYCQSYDSSSLWVFGGGTKLTVL
N.A.
17.951515
0
286
0
232
0
248
0
0
antibody 2-7 scfv
N.A.
escherichia coli
N.A.
C
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
39
16
0.8
H_only
train
7t3m_H
7t3m
sars-cov-2 s (spike glycoprotein) d614g with three (3) rbds up, bound to antibody 2-7 scfv, composite map
yes
viral protein/immune system
2021-12-08
2022-08-24
electron microscopy
3
N.A.
N.A.
36192374
10.1038/s41467-022-33030-4
0
auth_asym_id
scFv
N.A.
N.A.
H
N.A.
MKHLWFFLLLVAAAQPAMAQVTLKESGPTRVKPTQTLTLTCTFSGFSLSTTGVGVGWIRQPPGKALEWLALIYWNDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCARISGSGYFYPFDIWGQGTTVTVSSGGGGSGGGGSGGGGSNFMLTQPHSVSESPGKTVTISCTRSSGSIASNYVQWYQQRPGSSPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLKAEDEADYYCQSYDSSSLWVFGGGTKLTVLGQPKAAPSAAALEHHHHHH
N.A.
QVTLKESGPTRVKPTQTLTLTCTFSGFSLSTTGVGVGWIRQPPGKALEWLALIYWNDDKRYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCARISGSGYFYPFDIWGQGTTVTVSSGGGGSGGGGSGGGGSNFMLTQPHSVSESPGKTVTISCTRSSGSIASNYVQWYQQRPGSSPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLKAEDEADYYCQSYDSSSLWVFGGGTKLTVL
N.A.
17.963184
0
286
0
232
0
248
0
0
antibody 2-7 scfv
N.A.
escherichia coli
N.A.
G
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
38
15
0.79
H_only
train
7w9e_D_E
7w9e
sars-cov-2 delta s-8d3
yes
viral protein
2021-12-09
2022-01-12
electron microscopy
3.1
N.A.
N.A.
35169135
10.1038/s41467-022-28528-w
0
auth_asym_id
FabH:FabL
IGHV1
IGKV1
D
E
EVQLQQSGPELVKPGASVKISCKTSGYTFTEYTMYWVKQSHGKSLEWIGGINPNIGDTSYNQNFKGKATLTVDRSSSTAYMELRSLTSEDSAVYYCARDGYPYYYALDHWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRV...
DIVMTQSQKFMSTSVGDRVSVTCKASQNVGTNVAWYQQKPGQSPKALIYSTSYRYSGVPDRFTGSGSGTDFTLTISNVQSEDLAEYFCQQYNSYPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
EVQLQQSGPELVKPGASVKISCKTSGYTFTEYTMYWVKQSHGKSLEWIGGINPNIGDTSYNQNFKGKATLTVDRSSSTAYMELRSLTSEDSAVYYCARDGYPYYYALDHWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR
DIVMTQSQKFMSTSVGDRVSVTCKASQNVGTNVAWYQQKPGQSPKALIYSTSYRYSGVPDRFTGSGSGTDFTLTISNVQSEDLAEYFCQQYNSYPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR
23.667019
23.001606
444
214
220
211
220
211
98
anti-h5n1 hemagglutinin monoclonal anitbody h5m9 heavy chain
the light chain of 8d3 fab
mus musculus
mus musculus
C
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
30
17
0.89
HL
train
7w9f_A_B
7w9f
sars-cov-2 delta s-rbd-8d3
yes
viral protein
2021-12-09
2022-01-12
electron microscopy
3.6
N.A.
N.A.
35169135
10.1038/s41467-022-28528-w
0
auth_asym_id
FabH:FabL
IGHV1
IGKV1
A
B
EVQLQQSGPELVKPGASVKISCKTSGYTFTEYTMYWVKQSHGKSLEWIGGINPNIGDTSYNQNFKGKATLTVDRSSSTAYMELRSLTSEDSAVYYCARDGYPYYYALDHWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRV...
DIVMTQSQKFMSTSVGDRVSVTCKASQNVGTNVAWYQQKPGQSPKALIYSTSYRYSGVPDRFTGSGSGTDFTLTISNVQSEDLAEYFCQQYNSYPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
EVQLQQSGPELVKPGASVKISCKTSGYTFTEYTMYWVKQSHGKSLEWIGGINPNIGDTSYNQNFKGKATLTVDRSSSTAYMELRSLTSEDSAVYYCARDGYPYYYALDHWGQGTSVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR
DIVMTQSQKFMSTSVGDRVSVTCKASQNVGTNVAWYQQKPGQSPKALIYSTSYRYSGVPDRFTGSGSGTDFTLTISNVQSEDLAEYFCQQYNSYPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR
23.667023
23.001612
444
214
220
211
220
211
98
the heavy chain of 8d3
the light chain of 8d3
mus musculus
mus musculus
E
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
34
18
0.86
HL
train
7t4g_H_L
7t4g
the envelope glycoprotein sivmac239.k180s sosip trimer in complex with 3 copies of the neutralizing antibody k11
yes
viral protein/immune system
2021-12-09
2022-10-19
electron microscopy
3.7
N.A.
N.A.
36068229
10.1038/s41467-022-32783-2
0
auth_asym_id
VH:VL
IGHV4
IGKV1
H
L
DWTWRILFLVAAATGAHSQVQLQESGPGVVRPSQTLSLTCAVSGDTVSSCCFFWTWIRQPPGKGLEWIGNIYSDNDNTNYNPSLKTRISISKDMSKNQFSLKLNSLTATDTAIYYCARESPSRGNFCYAYLYGNCPLHFDLWGQGVLVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGGSKPPTCPPCTSPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSQEDPDVKFNWYVNGA...
ETDTLLLWVLLLWVPGSTGDILLTQSPSSLSGSVGDRVTITCRASQGINSYLNWYQQKPGKAPKLLIYFANRLQSGVPSRFSGSGSGTEFTLTISSLQSEDGATYYCQQYDTFPTFGPGTKLDIKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC
QLQESGPGVVRPSQTLSLTCAVSGDTVSSCCFFWTWIRQPPGKGLEWIGNIYSDNDNTNYNPSLKTRISISKDMSKNQFSLKLNSLTATDTAIYYCARESPSRGNFCYAYLYGNCPLHFDLWGQGVLVTVSS
DILLTQSPSSLSGSVGDRVTITCRASQGINSYLNWYQQKPGKAPKLLIYFANRLQSGVPSRFSGSGSGTEFTLTISSLQSEDGATYYCQQYDTFPTFGPGTKLDIK
14.772578
13.069304
485
232
132
106
132
106
50
k11 igg heavy chain
k11 igg light chain
macaca mulatta
macaca mulatta
A
protein
envelope glycoprotein gp120
simian immunodeficiency virus
33
16
1
HL
train
7t4g_G_I
7t4g
the envelope glycoprotein sivmac239.k180s sosip trimer in complex with 3 copies of the neutralizing antibody k11
yes
viral protein/immune system
2021-12-09
2022-10-19
electron microscopy
3.7
N.A.
N.A.
36068229
10.1038/s41467-022-32783-2
0
auth_asym_id
VH:VL
IGHV4
IGKV1
G
I
DWTWRILFLVAAATGAHSQVQLQESGPGVVRPSQTLSLTCAVSGDTVSSCCFFWTWIRQPPGKGLEWIGNIYSDNDNTNYNPSLKTRISISKDMSKNQFSLKLNSLTATDTAIYYCARESPSRGNFCYAYLYGNCPLHFDLWGQGVLVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGGSKPPTCPPCTSPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSQEDPDVKFNWYVNGA...
ETDTLLLWVLLLWVPGSTGDILLTQSPSSLSGSVGDRVTITCRASQGINSYLNWYQQKPGKAPKLLIYFANRLQSGVPSRFSGSGSGTEFTLTISSLQSEDGATYYCQQYDTFPTFGPGTKLDIKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC
QLQESGPGVVRPSQTLSLTCAVSGDTVSSCCFFWTWIRQPPGKGLEWIGNIYSDNDNTNYNPSLKTRISISKDMSKNQFSLKLNSLTATDTAIYYCARESPSRGNFCYAYLYGNCPLHFDLWGQGVLVTVSS
DILLTQSPSSLSGSVGDRVTITCRASQGINSYLNWYQQKPGKAPKLLIYFANRLQSGVPSRFSGSGSGTEFTLTISSLQSEDGATYYCQQYDTFPTFGPGTKLDIK
14.745817
13.061115
485
232
132
106
132
106
49
k11 igg heavy chain
k11 igg light chain
macaca mulatta
macaca mulatta
C
protein
envelope glycoprotein gp120
simian immunodeficiency virus
33
17
1
HL
train
7t4g_J_K
7t4g
the envelope glycoprotein sivmac239.k180s sosip trimer in complex with 3 copies of the neutralizing antibody k11
yes
viral protein/immune system
2021-12-09
2022-10-19
electron microscopy
3.7
N.A.
N.A.
36068229
10.1038/s41467-022-32783-2
0
auth_asym_id
VH:VL
IGHV4
IGKV1
J
K
DWTWRILFLVAAATGAHSQVQLQESGPGVVRPSQTLSLTCAVSGDTVSSCCFFWTWIRQPPGKGLEWIGNIYSDNDNTNYNPSLKTRISISKDMSKNQFSLKLNSLTATDTAIYYCARESPSRGNFCYAYLYGNCPLHFDLWGQGVLVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGGSKPPTCPPCTSPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSQEDPDVKFNWYVNGA...
ETDTLLLWVLLLWVPGSTGDILLTQSPSSLSGSVGDRVTITCRASQGINSYLNWYQQKPGKAPKLLIYFANRLQSGVPSRFSGSGSGTEFTLTISSLQSEDGATYYCQQYDTFPTFGPGTKLDIKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC
QLQESGPGVVRPSQTLSLTCAVSGDTVSSCCFFWTWIRQPPGKGLEWIGNIYSDNDNTNYNPSLKTRISISKDMSKNQFSLKLNSLTATDTAIYYCARESPSRGNFCYAYLYGNCPLHFDLWGQGVLVTVSS
DILLTQSPSSLSGSVGDRVTITCRASQGINSYLNWYQQKPGKAPKLLIYFANRLQSGVPSRFSGSGSGTEFTLTISSLQSEDGATYYCQQYDTFPTFGPGTKLDIK
14.754602
13.048262
485
232
132
106
132
106
52
k11 igg heavy chain
k11 igg light chain
macaca mulatta
macaca mulatta
E
protein
envelope glycoprotein gp120
simian immunodeficiency virus
34
16
0.94
HL
train
7t4q_J_K
7t4q
cryoem structure of the hcmv pentamer gh/gl/ul128/ul130/ul131a in complex with neutralizing fabs 2c12, 7i13 and 13h11
no
viral protein/immune system
2021-12-10
2022-03-23
electron microscopy
2.9
N.A.
N.A.
35275719
10.1126/sciadv.abm2536
0
auth_asym_id
VH:VL
IGHV1
IGKV1
J
K
MKKNIAFLLASMFVFSIATNAYAQVQLVQSGAEVKKPGASVKVSCKASGYTFTNYYIHWVRQAPGQGLEWMGIIHPSSGGTSYAQKFQGRVTMTRDTSTSTVSMDLSSLRSEDTAVYYCGRAFRILGLSDVFVNDWGQGTVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQGINNYLAWYQQKPGKVPKLLIYAASTLQSGVPSRFSGSGSGTAFTLTILSLQPEDVATYYCQKYNSAPFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQLVQSGAEVKKPGASVKVSCKASGYTFTNYYIHWVRQAPGQGLEWMGIIHPSSGGTSYAQKFQGRVTMTRDTSTSTVSMDLSSLRSEDTAVYYCGRAFRILGLSDVFVNDWGQGTVVTVS
DIQMTQSPSSLSASVGDRVTITCRASQGINNYLAWYQQKPGKVPKLLIYAASTLQSGVPSRFSGSGSGTAFTLTILSLQPEDVATYYCQKYNSAPFTFGPGTKVD
13.785474
12.868711
250
237
121
105
121
105
42
fab 13h11 heavy chain
fab 13h11 light chain
homo sapiens
homo sapiens
A
protein
envelope glycoprotein h
human betaherpesvirus 5
72
24
0.63
HL
train
7t4q_I_H
7t4q
cryoem structure of the hcmv pentamer gh/gl/ul128/ul130/ul131a in complex with neutralizing fabs 2c12, 7i13 and 13h11
no
viral protein/immune system
2021-12-10
2022-03-23
electron microscopy
2.9
N.A.
N.A.
35275719
10.1126/sciadv.abm2536
0
auth_asym_id
VH:VL
IGHV3
IGKV3
I
H
MKKNIAFLLASMFVFSIATNAYAQVQLVESGGGVVQPGRSLRLSCAASGFTFSNYGMHWVRQGPGKGLEWVAVISYDASSKYYTDSVQGRFTISRDNSKNTLFLQMNSLRGEDTAVYYCAKALRYLDWFLSDPFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
MKKNIAFLLASMFVFSIATNAYAEIVLTQSPGTLSLSPGERATLSCRASQSVSSDFLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYAASPPFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQLVESGGGVVQPGRSLRLSCAASGFTFSNYGMHWVRQGPGKGLEWVAVISYDASSKYYTDSVQGRFTISRDNSKNTLFLQMNSLRGEDTAVYYCAKALRYLDWFLSDPFDYWGQGTLVTVS
EIVLTQSPGTLSLSPGERATLSCRASQSVSSDFLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYAASPPFGQGTRLEIK
13.630276
13.060819
251
237
122
107
122
107
36
fab 7i13 heavy chain
fab 7i13 light chain
homo sapiens
homo sapiens
C;D
protein;protein
envelope protein ul128;envelope glycoprotein ul130
human betaherpesvirus 5;human betaherpesvirus 5
33;30
10;13
0.59;0.65
HL
train
7t4q_F_G
7t4q
cryoem structure of the hcmv pentamer gh/gl/ul128/ul130/ul131a in complex with neutralizing fabs 2c12, 7i13 and 13h11
no
viral protein/immune system
2021-12-10
2022-03-23
electron microscopy
2.9
N.A.
N.A.
35275719
10.1126/sciadv.abm2536
0
auth_asym_id
VH:VL
IGHV2
IGLV2
F
G
MKKNIAFLLASMFVFSIATNAYAQITLRESGPTLVKPTQTLTLTCTFSGFSLNTNGVGVGWIRQPPGKALEWLALIYWNGNEGYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCVHWPQGLTTVTRLAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
MKKNIAFLLASMFVFSIATNAYAQSALTQPRSVSGSPGQSVTISCTGTTSDVGRYNFVSWYQQHPGKAPKLLMYDVSQRPSGVPSRFSGSKSGNTASLTISGLQAEDEAVFYCCSYAGGNFFSYVFGTGTKVTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC
QITLRESGPTLVKPTQTLTLTCTFSGFSLNTNGVGVGWIRQPPGKALEWLALIYWNGNEGYSPSLKSRLTITKDTSKNQVVLTMTNMDPVDTATYYCVHWPQGLTTVTRLAFDIWGQGTMVTVS
SALTQPRSVSGSPGQSVTISCTGTTSDVGRYNFVSWYQQHPGKAPKLLMYDVSQRPSGVPSRFSGSKSGNTASLTISGLQAEDEAVFYCCSYAGGNFFSYVFGTGTKVTVLG
14.098403
13.713918
252
240
124
112
124
112
49
fab 2c12 heavy chain
fab 2c12 light chain
homo sapiens
homo sapiens
C;E
protein;protein
envelope protein ul128;envelope protein ul131a
human betaherpesvirus 5;human betaherpesvirus 5
25;26
11;16
0.85;0.94
HL
train
7t4s_J_K
7t4s
cryoem structure of the hcmv pentamer gh/gl/ul128/ul130/ul131a in complex with nrp2 and neutralizing fabs 8i21 and 13h11
no
viral protein/immune system
2021-12-10
2022-03-23
electron microscopy
3.1
N.A.
N.A.
35275719
10.1126/sciadv.abm2536
0
auth_asym_id
VH:VL
IGHV1
IGKV1
J
K
MKKNIAFLLASMFVFSIATNAYAQVQLVQSGAEVKKPGASVKVSCKASGYTFTNYYIHWVRQAPGQGLEWMGIIHPSSGGTSYAQKFQGRVTMTRDTSTSTVSMDLSSLRSEDTAVYYCGRAFRILGLSDVFVNDWGQGTVVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
MKKNIAFLLASMFVFSIATNAYADIQMTQSPSSLSASVGDRVTITCRASQGINNYLAWYQQKPGKVPKLLIYAASTLQSGVPSRFSGSGSGTAFTLTILSLQPEDVATYYCQKYNSAPFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQLVQSGAEVKKPGASVKVSCKASGYTFTNYYIHWVRQAPGQGLEWMGIIHPSSGGTSYAQKFQGRVTMTRDTSTSTVSMDLSSLRSEDTAVYYCGRAFRILGLSDVFVNDWGQGTVVTVS
DIQMTQSPSSLSASVGDRVTITCRASQGINNYLAWYQQKPGKVPKLLIYAASTLQSGVPSRFSGSGSGTAFTLTILSLQPEDVATYYCQKYNSAPFTFGPGTKVD
13.735816
12.862823
250
237
121
105
121
105
42
fab 13h11 heavy chain
fab 13h11 light chain
homo sapiens
homo sapiens
A
protein
envelope glycoprotein h
human betaherpesvirus 5
72
24
0.65
HL
train
7t4s_H_I
7t4s
cryoem structure of the hcmv pentamer gh/gl/ul128/ul130/ul131a in complex with nrp2 and neutralizing fabs 8i21 and 13h11
no
viral protein/immune system
2021-12-10
2022-03-23
electron microscopy
3.1
N.A.
N.A.
35275719
10.1126/sciadv.abm2536
0
auth_asym_id
VH:VL
IGHV3
IGKV3
H
I
MKKNIAFLLASMFVFSIATNAYALVELVESGGGVVQPGRSLRLSCAASGFTFSSDGMHWVRQSPGRGLEWVAFISSDGSTPYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAMYFCAKDWALFRWLRTFDHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
MKKNIAFLLASMFVFSIATNAYAETVMTQSPATLSVSPGGRATLSCRASQSVGINLAWYQQKPGQAPRLLIYGASTRASGFPARFSGSGSGTEFTLTITSLQSEDFAVYYCQQYNDWPPWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
LVELVESGGGVVQPGRSLRLSCAASGFTFSSDGMHWVRQSPGRGLEWVAFISSDGSTPYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAMYFCAKDWALFRWLRTFDHWGQGTLVTVS
ETVMTQSPATLSVSPGGRATLSCRASQSVGINLAWYQQKPGQAPRLLIYGASTRASGFPARFSGSGSGTEFTLTITSLQSEDFAVYYCQQYNDWPPWTFGQGTKVEI
13.968208
13.031426
249
238
121
107
121
107
45
fab 8i21 heavy chain
fab 8i21 light chain
homo sapiens
homo sapiens
D
protein
envelope glycoprotein ul130
human betaherpesvirus 5
67
20
0.56
HL
train
7t5o_H_L
7t5o
vflip spike trimer with gar03
no
viral protein/immune system
2021-12-12
2023-01-25
electron microscopy
3.39
N.A.
N.A.
36755042
10.1038/s41467-023-36295-5
0
auth_asym_id
FabH:FabL
IGHV1
IGLV3
H
L
QVQLVQSGAEVKKPGASVKVSCKASGYTFSSYDINWVRQAPGQGLEWMGWMSPNSGNTGYAQKFQGRVTMTRSTSMSTAYMELSSLRSEDTAVYFCARMSSSLTNYLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGSHHHHHH
SYVLTQPPSVAVAPGQTARIRCGENDIGSKNVHWYQQKSGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSTGDHPDVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC
QVQLVQSGAEVKKPGASVKVSCKASGYTFSSYDINWVRQAPGQGLEWMGWMSPNSGNTGYAQKFQGRVTMTRSTSMSTAYMELSSLRSEDTAVYFCARMSSSLTNYLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
SYVLTQPPSVAVAPGQTARIRCGENDIGSKNVHWYQQKSGQAPVLVVYDDSDRPSGIPERFSGSNSGNTATLTISRVEAGDEADYYCQVWDSTGDHPDVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
23.471775
24.855553
231
215
220
213
220
213
85
gar03 fab heavy chain
gar03 fab light chain
homo sapiens
homo sapiens
C
protein
spike glycoprotein
severe acute respiratory syndrome-related coronavirus
47
18
0.82
HL
train
7t62_B
7t62
gpc2 hep ct3 complex
no
immune system
2021-12-13
2021-12-22
electron microscopy
21
N.A.
N.A.
34195677
10.1016/j.xcrm.2021.100297
0
auth_asym_id
VHVL+
N.A.
N.A.
B
N.A.
EVQLQQSGPELVKPGASVKMSCKASRFTFTDYNIHWVKQSPGKTLEWIGYINPNNGDIFYKQKFNGKATLTINKSSNTAYMELRSLTSEDSAVYYCVRSSNIRYTFDRFFDVWGTGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLESDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIENVLTQSPAIMSASLGEKVTMSCRASSSVNYIYWYQQKSDASPKLWIYYTSNLAPGVPARFSGSGSGNSYSLTISSMEGEDAATYYCQQFSSSPSTFGTG...
N.A.
EVQLQQSGPELVKPGASVKMSCKASRFTFTDYNIHWVKQSPGKTLEWIGYINPNNGDIFYKQKFNGKATLTINKSSNTAYMELRSLTSEDSAVYYCVRSSNIRYTFDRFFDVWGTGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLESDLYTLSSSVTVPSSPRPSETVTCNVAHPASSTKVDKKIENVLTQSPAIMSASLGEKVTMSCRASSSVNYIYWYQQKSDASPKLWIYYTSNLAPGVPARFSGSGSGNSYSLTISSMEGEDAATYYCQQFSSSPSTFGTG...
N.A.
24.585733
0
433
0
432
0
432
0
0
ct3
N.A.
mus musculus
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
7t6b_E
7t6b
structure of s1pr2-heterotrimeric g13 signaling complex
no
signaling protein/immune system
2021-12-13
2022-04-06
electron microscopy
3.19
N.A.
N.A.
35353559
10.1126/sciadv.abn0067
0
auth_asym_id
scFv
N.A.
N.A.
E
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAHHHHHHHH
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.517422
0
259
0
232
0
246
0
0
scfv16
N.A.
mus musculus
N.A.
A;C
protein;protein
guanine nucleotide-binding protein subunit alpha-13;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
32;20
20;8
0.95;0.8
H_only
train
7qia_B
7qia
structure of apo-elenrmt in complex with two nanobodies at 3.5a
yes
membrane protein
2021-12-14
2021-12-29
electron microscopy
3.5
N.A.
N.A.
35001872
10.7554/eLife.74589
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
QLQLVESGGGLVLAGGSLRLSCAASVRTFSHYALGWFRQAPGKEREFVAAIRWTGSSANYADSVKGRFTISRDNAKNTVDLRMNSLKPEDTAVYYCAARTVYRPGFEDPNEYAYWGQGTRVTVSS
N.A.
QLVESGGGLVLAGGSLRLSCAASVRTFSHYALGWFRQAPGKEREFVAAIRWTGSSANYADSVKGRFTISRDNAKNTVDLRMNSLKPEDTAVYYCAARTVYRPGFEDPNEYAYWGQGTRVTV
N.A.
13.423386
0
125
0
121
0
121
0
0
nanobody 2
N.A.
synthetic construct
N.A.
A
protein
divalent metal cation transporter
eggerthella lenta
30
12
1
H_only
train
7qia_C
7qia
structure of apo-elenrmt in complex with two nanobodies at 3.5a
yes
membrane protein
2021-12-14
2021-12-29
electron microscopy
3.5
N.A.
N.A.
35001872
10.7554/eLife.74589
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
QLQLVESGGGLVQPGGSLRLSCEASGKVFMINAMGWYRQAPGKQRELVAFISRRGNINYADSVKGRFTISRDNAKNTVYLQMNSLRPEDTAIYYCSADPRSNLDDGRYWGKGTPVTVSS
N.A.
QLQLVESGGGLVQPGGSLRLSCEASGKVFMINAMGWYRQAPGKQRELVAFISRRGNINYADSVKGRFTISRDNAKNTVYLQMNSLRPEDTAIYYCSADPRSNLDDGRYWGKGTPVTV
N.A.
13.533527
0
119
0
117
0
117
0
0
nanobody 1
N.A.
synthetic construct
N.A.
A
protein
divalent metal cation transporter
eggerthella lenta
34
13
0.93
H_only
train
7qic_B
7qic
structure of magnesium-bound elenrmt in complex with two nanobodies at 4.1a
yes
membrane protein
2021-12-14
2021-12-29
electron microscopy
4.1
N.A.
N.A.
35001872
10.7554/eLife.74589
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
QLQLVESGGGLVLAGGSLRLSCAASVRTFSHYALGWFRQAPGKEREFVAAIRWTGSSANYADSVKGRFTISRDNAKNTVDLRMNSLKPEDTAVYYCAARTVYRPGFEDPNEYAYWGQGTRVTVSS
N.A.
QLVESGGGLVLAGGSLRLSCAASVRTFSHYALGWFRQAPGKEREFVAAIRWTGSSANYADSVKGRFTISRDNAKNTVDLRMNSLKPEDTAVYYCAARTVYRPGFEDPNEYAYWGQGTRVTV
N.A.
13.648024
0
125
0
121
0
121
0
0
nanobody 2
N.A.
synthetic construct
N.A.
A
protein
divalent metal cation transporter
eggerthella lenta
29
12
1
H_only
train
7qic_C
7qic
structure of magnesium-bound elenrmt in complex with two nanobodies at 4.1a
yes
membrane protein
2021-12-14
2021-12-29
electron microscopy
4.1
N.A.
N.A.
35001872
10.7554/eLife.74589
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
QLQLVESGGGLVQPGGSLRLSCEASGKVFMINAMGWYRQAPGKQRELVAFISRRGNINYADSVKGRFTISRDNAKNTVYLQMNSLRPEDTAIYYCSADPRSNLDDGRYWGKGTPVTVSS
N.A.
QLQLVESGGGLVQPGGSLRLSCEASGKVFMINAMGWYRQAPGKQRELVAFISRRGNINYADSVKGRFTISRDNAKNTVYLQMNSLRPEDTAIYYCSADPRSNLDDGRYWGKGTPVTV
N.A.
13.656121
0
119
0
117
0
117
0
0
nanobody 1
N.A.
synthetic construct
N.A.
A
protein
divalent metal cation transporter
eggerthella lenta
33
13
1
H_only
train
7t6s_E
7t6s
structure of the human fpr2-gi complex with compound c43
no
signaling protein
2021-12-14
2022-03-30
electron microscopy
3
N.A.
N.A.
35217703
10.1038/s41467-022-28586-0
0
auth_asym_id
scFv
N.A.
N.A.
E
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPERFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPERFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.096762
0
247
0
231
0
247
0
0
scfv16
N.A.
rattus
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;rattus
32;24
21;11
0.95;0.92
H_only
train
7t6v_E
7t6v
structure of the human fpr2-gi complex with fmlfii
no
signaling protein
2021-12-14
2022-03-30
electron microscopy
3.1
N.A.
N.A.
35217703
10.1038/s41467-022-28586-0
0
auth_asym_id
scFv
N.A.
N.A.
E
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPERFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPERFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.452858
0
247
0
232
0
247
0
0
scfv16
N.A.
rattus
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;rattus
31;23
18;11
0.9;0.92
H_only
train
7t7b_H_L
7t7b
crystal structure of sars-cov-2 spike protein receptor-binding domain in complex with a cross-neutralizing antibody adi-62113 fab
no
immune system/viral protein
2021-12-14
2022-08-03
x-ray diffraction
2.59
0.267
0.221
35906394
10.1038/s42003-022-03700-6
0
auth_asym_id
FabH:FabL
IGHV1
IGKV1
H
L
QVQLQQSGAEVKKPGASVKLSCKASGYTFSVFPIHWVRQAPGQRLEWMGWHNAGDGDTKYSQKFQGRVTIISDTSASTAYMELSSLKSEDTAVYYCARAARPYYDRRGYFFRADYFQHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
DIQVTQSPSSLSASVGDRVTITCQASQDIKNSLNWYQQKPGKAPKLLISDASNLETGVPSRFSGNGSGTDFTFTISSLQPEDIATYYCQQYDNLITFGPGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS
QVQLQQSGAEVKKPGASVKLSCKASGYTFSVFPIHWVRQAPGQRLEWMGWHNAGDGDTKYSQKFQGRVTIISDTSASTAYMELSSLKSEDTAVYYCARAARPYYDRRGYFFRADYFQHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
DIQVTQSPSSLSASVGDRVTITCQASQDIKNSLNWYQQKPGKAPKLLISDASNLETGVPSRFSGNGSGTDFTFTISSLQPEDIATYYCQQYDNLITFGPGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
22.643095
22.917776
232
214
224
210
230
210
102
adi-62113 fab heavy chain
adi-62113 fab light chain
homo sapiens
homo sapiens
A
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
46
20
0.91
HL
train
7t73_H_L
7t73
hiv-1 envelope apexgt2.2mut in complex with pct64.lmca fab
no
viral protein/immune system
2021-12-14
2022-09-28
electron microscopy
4
N.A.
N.A.
36179689
10.1016/j.immuni.2022.09.001
0
auth_asym_id
VH:VL
IGHV3
IGKV3
H
L
EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTGVETYDFWSGYDDHYYDYYFRDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVKPGGSLRLSCAASGFTFSNAWMSWVRQAPGKGLEWVGRIKSKTDGGTTDYAAPVKGRFTISRDDSKNTLYLQMNSLKTEDTAVYYCTTGVETYDFWSGYDDHYYDYYFRDVWGKGTTVTV
EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSFTFGPGTKVDI
16.554153
12.780385
238
214
130
106
132
106
42
pct64.lmca fab heavy chain
pct64.lmca fab light chain
homo sapiens
homo sapiens
C;E
protein;protein
hiv envelope apexgt2.2mut gp120;hiv envelope apexgt2.2mut gp120
human immunodeficiency virus 1;human immunodeficiency virus 1
13;14
5;7
0.83;1.0
HL
train
7t76_H_L
7t76
hiv-1 envelope apexgt3 in complex with pg9.igl fab
no
viral protein/immune system
2021-12-14
2022-09-28
electron microscopy
4.43
N.A.
N.A.
36179689
10.1016/j.immuni.2022.09.001
0
auth_asym_id
VH:VL
IGHV3
IGLV2
H
L
MYRMQLLSCIALSLALVTNSQVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAREAGGPDYRNGYNYYDFWSGYYYYYYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
MLNSTSLFRFLFCAVTDPSCDRRLPEINMYRMQLLSCIALSLALVTNSQSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
VQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCAREAGGPDYRNGYNYYDFWSGYYYYYYMDVWGKGTTVTVSS
SALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYEVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTVVFGGGTKLTVL
15.525133
13.082884
260
264
134
109
136
109
45
pg9.igl fab heavy chain
pg9.igl fab light chain
homo sapiens
homo sapiens
C;E
protein;protein
hiv envelope apexgt3 gp120;hiv envelope apexgt3 gp120
human immunodeficiency virus 1;human immunodeficiency virus 1
12;15
7;6
0.88;1.0
HL
train
7t6x_A_B
7t6x
cryo-em structure of full-length hepatitis c virus e1e2 glycoprotein in complex with ar4a, at12009, and igh505 fabs
no
viral protein/immune system
2021-12-14
2022-11-02
electron microscopy
3.83
N.A.
N.A.
36264808
10.1126/science.abn9884
0
auth_asym_id
VH:VL
IGHV1
IGLV1
A
B
MELGLSWLFLVAILAQPAMAQVQFVQSGAEVKKPGASVKVSCKASGYTFTRHAIHWVRQAPGQRLEWMGWINPGNGNAKYSQKFQGRVTITRDTPASTVYMELSSLRSEDMGVYYCARDGGYSHDYSYFYGLDVWGPGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHTCPPCPAPELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPR...
METPAQLLFLLLLWLPGSTQSVLTQPPSAASGTPGQRVTISCSGSSSNIGGNFVDWYQQFPGTAPKLLIYTNDQRPSGVPARFSGSKSGTSASLAISGLRSEDEADYYCAAWDDIVNGWVFGGGTKLEIKRTAAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
VQFVQSGAEVKKPGASVKVSCKASGYTFTRHAIHWVRQAPGQRLEWMGWINPGNGNAKYSQKFQGRVTITRDTPASTVYMELSSLRSEDMGVYYCARDGGYSHDYSYFYGLDVWGPGTTVIV
SVLTQPPSAASGTPGQRVTISCSGSSSNIGGNFVDWYQQFPGTAPKLLIYTNDQRPSGVPARFSGSKSGTSASLAISGLRSEDEADYYCAAWDDIVNGWVFGGGTKL
14.497347
13.129907
475
235
122
107
122
107
49
igh505, heavy chain
igh505, lambda light chain
homo sapiens
homo sapiens
E
protein
envelope glycoprotein e1
hepacivirus c
35
17
0.77
HL
train
7t6x_C_D
7t6x
cryo-em structure of full-length hepatitis c virus e1e2 glycoprotein in complex with ar4a, at12009, and igh505 fabs
no
viral protein/immune system
2021-12-14
2022-11-02
electron microscopy
3.83
N.A.
N.A.
36264808
10.1126/science.abn9884
0
auth_asym_id
VH:VL
IGHV1
IGKV3
C
D
MGWSCIILFLVATATGVHSQVLVQSGAEVKKPGSSVRVSCKASGDTFKTHAISWVRQAPGQGLEWVGGTVRQAPGDGLELLGGFVPILAPANDAQKFQGRVTITADGSTGPVYMDLSTLTSEDTAMYYCVTSLSEPIPRSCRGGRCYSGPFDAFGVWGQGTLVTVSSASVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
MGWSCIILFLVATATGVHEIMLTQSPVTLSVSPGERATLSCRASQSIGTNLAWYQKPGQAPRLLIHGASTRATGVPVSFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPLTFGGGTKVEIKSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
LVQSGAEVKKPGSSVRVSCKASGDTFKTHAISWVRQAPGQGLEWVGGTVRQAPGDGLELLGGFVPILAPANDAQKFQGRVTITADGSTGPVYMDLSTLTSEDTAMYYCVTSLSEPIPRSCRGGRCYSGPFDAFGVWGQGTLVTV
EIMLTQSPVTLSVSPGERATLSCRASQSIGTNLAWYQKPGQAPRLLIHGASTRATGVPVSFSGSGSGTEFTLTISSLQSEDFAVYYCQQYNNWPLTFGGGTKVEI
15.475222
13.018765
274
229
144
105
144
105
47
at12009 crossmab, heavy chain
at12009 crossmab, light kappa chain
homo sapiens
homo sapiens
U
protein
envelope glycoprotein e2
hepacivirus c
50
24
1
HL
train
7t6x_H_L
7t6x
cryo-em structure of full-length hepatitis c virus e1e2 glycoprotein in complex with ar4a, at12009, and igh505 fabs
no
viral protein/immune system
2021-12-14
2022-11-02
electron microscopy
3.83
N.A.
N.A.
36264808
10.1126/science.abn9884
0
auth_asym_id
VH:VL
IGHV5
IGKV3
H
L
MGWSCIILFLVATATGVHEVQLLEQSGPEVKKPGDSLRISCKMSGDSLVTTWIGWVRQKPGQGLEWMGIINPGDSSTNIYPGDSATRYGPSFQGQVTISIDKSTSTAYLQWNNVKASDTGIYYCARHVPVPISGTFLWREREMHDFGYFDDWGQGTLVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCGGSAWSHPQFEK
MGWSCIILFLVATATGVHELTLTQSPGTLSLSPGERATLSCRASQSVSNNYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTGFTLIISRLEPEDFAVYYCQQYGSSSITFGQGTRLEIKRTAAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
LEQSGPEVKKPGDSLRISCKMSGDSLVTTWIGWVRQKPGQGLEWMGIINPGDSSTNIYPGDSATRYGPSFQGQVTISIDKSTSTAYLQWNNVKASDTGIYYCARHVPVPISGTFLWREREMHDFGYFDDWGQGTLVIVSS
LTLTQSPGTLSLSPGERATLSCRASQSVSNNYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTGFTLIISRLEPEDFAVYYCQQYGSSSITFGQGTRLEI
15.740685
12.841043
277
233
140
106
140
106
44
ar4a fab, heavy chain
ar4a, kappa light chain
homo sapiens
homo sapiens
U
protein
envelope glycoprotein e2
hepacivirus c
29
11
1
HL
train
7t72_H_L
7t72
epitope-based selection of sars-cov-2 neutralizing antibodies from convalescent patients
no
viral protein
2021-12-14
2022-12-21
x-ray diffraction
3.18
0.308
0.237
36755042
10.1038/s41467-023-36295-5
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
EVQLVQSGGDLVQPGGSLRLSCAVSGFTVSRNYMTWVRQAPGRGLEWVSLIYPGGSAFYADSVKGRFTISRDNSKNTLYLQMNSLRVEDTAVYYCARDPVSTGHYHDSDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGSHHHHHH
DIQMTQSPSALSASVGDRVTITCQASQDINKFLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGGGSGTDFTFTISSLQPEDIATYYCHQYDNLPRTFGQGTKVELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVQSGGDLVQPGGSLRLSCAVSGFTVSRNYMTWVRQAPGRGLEWVSLIYPGGSAFYADSVKGRFTISRDNSKNTLYLQMNSLRVEDTAVYYCARDPVSTGHYHDSDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
DIQMTQSPSALSASVGDRVTITCQASQDINKFLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGGGSGTDFTFTISSLQPEDIATYYCHQYDNLPRTFGQGTKVELKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
22.11307
23.225067
232
214
216
211
222
211
99
antibody heavy chain
antibody light chain
homo sapiens
homo sapiens
A
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
61
25
0.83
HL
train
7wb5_H_L
7wb5
local structure of hu33 and spike
no
viral protein
2021-12-15
2022-10-26
electron microscopy
3.7
N.A.
N.A.
35078968
10.1038/s41392-022-00879-2
0
auth_asym_id
VH:VL
IGHV7
IGKV1
H
L
QVQLVQSGSELKKPGASVKVSCKASGYTFTDYGMNWVRQAPGQGLEWMGWINTYSGEPTYADDFRGRFVFSLDTSVSTAYLQICSLKAEDTAVYYCARGGNWDWYFDVWGQGTLVTVS
DIQMTQSPSSLSASVGDRVTITCRASQSVSNFLHWYQQKPGKAPKLLIYYASQSISGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSNTWPLTFGQGTKLEIK
QVQLVQSGSELKKPGASVKVSCKASGYTFTDYGMNWVRQAPGQGLEWMGWINTYSGEPTYADDFRGRFVFSLDTSVSTAYLQICSLKAEDTAVYYCARGGNWDWYFDVWGQGTLVTVS
DIQMTQSPSSLSASVGDRVTITCRASQSVSNFLHWYQQKPGKAPKLLIYYASQSISGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSNTWPLTFGQGTKLEIK
13.553485
13.152052
118
107
118
107
118
107
47
hu33 heavy chain
hu33 light chain
homo sapiens
homo sapiens
R
protein
surface glycoprotein
severe acute respiratory syndrome coronavirus 2
35
18
0.95
HL
train
7t83_A
7t83
structure of angiotensin ii type i receptor (at1r) nanobody antagonist at118i4h32
no
immune system
2021-12-15
2022-12-07
x-ray diffraction
2.1
0.257
0.208
36477674
10.1038/s41467-022-35276-4
0
auth_asym_id
VHH
IGHV3
N.A.
A
N.A.
MAEVQLVESGGGLVQPGGSLRLSCAASGYIYRRYRMGWYRQAPGKGREFVAAISGGSSTNYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCAAYRIVSDPRVYWGQGTQVTVSSLEHHHHHH
N.A.
AEVQLVESGGGLVQPGGSLRLSCAASGYIYRRYRMGWYRQAPGKGREFVAAISGGSSTNYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCAAYRIVSDPRVYWGQGTQVTVSSL
N.A.
14.114953
0
128
0
120
0
120
0
0
nanobody at118i4h32
N.A.
synthetic construct
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
7t83_B
7t83
structure of angiotensin ii type i receptor (at1r) nanobody antagonist at118i4h32
no
immune system
2021-12-15
2022-12-07
x-ray diffraction
2.1
0.257
0.208
36477674
10.1038/s41467-022-35276-4
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
MAEVQLVESGGGLVQPGGSLRLSCAASGYIYRRYRMGWYRQAPGKGREFVAAISGGSSTNYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCAAYRIVSDPRVYWGQGTQVTVSSLEHHHHHH
N.A.
MAEVQLVESGGGLVQPGGSLRLSCAASGYIYRRYRMGWYRQAPGKGREFVAAISGGSSTNYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCAAYRIVSDPRVYWGQGTQVTVSS
N.A.
14.073103
0
128
0
120
0
120
0
0
nanobody at118i4h32
N.A.
synthetic construct
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
7t83_C
7t83
structure of angiotensin ii type i receptor (at1r) nanobody antagonist at118i4h32
no
immune system
2021-12-15
2022-12-07
x-ray diffraction
2.1
0.257
0.208
36477674
10.1038/s41467-022-35276-4
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
MAEVQLVESGGGLVQPGGSLRLSCAASGYIYRRYRMGWYRQAPGKGREFVAAISGGSSTNYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCAAYRIVSDPRVYWGQGTQVTVSSLEHHHHHH
N.A.
VQLVESGGGLVQPGGSLRLSCAASGYIYRRYRMGWYRQAPGKGREFVAAISGGSSTNYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCAAYRIVSDPRVYWGQGTQVTVS
N.A.
13.694037
0
128
0
116
0
116
0
0
nanobody at118i4h32
N.A.
synthetic construct
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
7t83_D
7t83
structure of angiotensin ii type i receptor (at1r) nanobody antagonist at118i4h32
no
immune system
2021-12-15
2022-12-07
x-ray diffraction
2.1
0.257
0.208
36477674
10.1038/s41467-022-35276-4
0
auth_asym_id
VHH
IGHV3
N.A.
D
N.A.
MAEVQLVESGGGLVQPGGSLRLSCAASGYIYRRYRMGWYRQAPGKGREFVAAISGGSSTNYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCAAYRIVSDPRVYWGQGTQVTVSSLEHHHHHH
N.A.
EVQLVESGGGLVQPGGSLRLSCAASGYIYRRYRMGWYRQAPGKGREFVAAISGGSSTNYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCAAYRIVSDPRVYWGQGTQVTVSS
N.A.
13.896795
0
128
0
118
0
118
0
0
nanobody at118i4h32
N.A.
synthetic construct
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
7t83_E
7t83
structure of angiotensin ii type i receptor (at1r) nanobody antagonist at118i4h32
no
immune system
2021-12-15
2022-12-07
x-ray diffraction
2.1
0.257
0.208
36477674
10.1038/s41467-022-35276-4
0
auth_asym_id
VHH
IGHV3
N.A.
E
N.A.
MAEVQLVESGGGLVQPGGSLRLSCAASGYIYRRYRMGWYRQAPGKGREFVAAISGGSSTNYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCAAYRIVSDPRVYWGQGTQVTVSSLEHHHHHH
N.A.
VQLVESGGGLVQPGGSLRLSCAASGYIYRRYRMGWYRQAPGKGREFVAAISGGSSTNYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCAAYRIVSDPRVYWGQGTQVTVSS
N.A.
13.799622
0
128
0
117
0
117
0
0
nanobody at118i4h32
N.A.
synthetic construct
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
7t83_F
7t83
structure of angiotensin ii type i receptor (at1r) nanobody antagonist at118i4h32
no
immune system
2021-12-15
2022-12-07
x-ray diffraction
2.1
0.257
0.208
36477674
10.1038/s41467-022-35276-4
0
auth_asym_id
VHH
IGHV3
N.A.
F
N.A.
MAEVQLVESGGGLVQPGGSLRLSCAASGYIYRRYRMGWYRQAPGKGREFVAAISGGSSTNYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCAAYRIVSDPRVYWGQGTQVTVSSLEHHHHHH
N.A.
VQLVESGGGLVQPGGSLRLSCAASGYIYRRYRMGWYRQAPGKGREFVAAISGGSSTNYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCAAYRIVSDPRVYWGQGTQVTVSS
N.A.
13.837297
0
128
0
117
0
117
0
0
nanobody at118i4h32
N.A.
synthetic construct
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
7t83_G
7t83
structure of angiotensin ii type i receptor (at1r) nanobody antagonist at118i4h32
no
immune system
2021-12-15
2022-12-07
x-ray diffraction
2.1
0.257
0.208
36477674
10.1038/s41467-022-35276-4
0
auth_asym_id
VHH
IGHV3
N.A.
G
N.A.
MAEVQLVESGGGLVQPGGSLRLSCAASGYIYRRYRMGWYRQAPGKGREFVAAISGGSSTNYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCAAYRIVSDPRVYWGQGTQVTVSSLEHHHHHH
N.A.
MAEVQLVESGGGLVQPGGSLRLSCAASGYIYRRYRMGWYRQAPGKGREFVAAISGGSSTNYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCAAYRIVSDPRVYWGQGTQVTVSSL
N.A.
14.277411
0
128
0
121
0
121
0
0
nanobody at118i4h32
N.A.
synthetic construct
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
7t83_H
7t83
structure of angiotensin ii type i receptor (at1r) nanobody antagonist at118i4h32
no
immune system
2021-12-15
2022-12-07
x-ray diffraction
2.1
0.257
0.208
36477674
10.1038/s41467-022-35276-4
0
auth_asym_id
VHH
IGHV3
N.A.
H
N.A.
MAEVQLVESGGGLVQPGGSLRLSCAASGYIYRRYRMGWYRQAPGKGREFVAAISGGSSTNYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCAAYRIVSDPRVYWGQGTQVTVSSLEHHHHHH
N.A.
AEVQLVESGGGLVQPGGSLRLSCAASGYIYRRYRMGWYRQAPGKGREFVAAISGGSSTNYADSVKGRFTISRDNSKNTVYLQMNSLRAEDTAVYYCAAYRIVSDPRVYWGQGTQVTVSS
N.A.
13.936808
0
128
0
119
0
119
0
0
nanobody at118i4h32
N.A.
synthetic construct
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
7t82_D_C
7t82
crystal structure of leukocidin e/centyrin s26/fab b438
no
toxin
2021-12-15
2023-01-11
x-ray diffraction
3.5
0.279
0.229
37098341
10.1016/j.chom.2023.04.004
0
auth_asym_id
FabH:FabL
IGHV1
IGKV2
D
C
QVQLQQSGAELMNPGASVKISCKSTGYKFSSYWIEWVKQRPGHGLEWMGEILPGSGSTNHNEKFKGKAIFTADASSNTAYMELSSLTSEDSAVYYCARTISTATDWFAYWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCHHHHHH
DVLMTQTPLSLPVSLGDQASISCRSSQTIVYSDGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRVSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLQQSGAELMNPGASVKISCKSTGYKFSSYWIEWVKQRPGHGLEWMGEILPGSGSTNHNEKFKGKAIFTADASSNTAYMELSSLTSEDSAVYYCARTISTATDWFAYWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
DVLMTQTPLSLPVSLGDQASISCRSSQTIVYSDGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRVSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
20.971828
23.804842
229
219
216
217
220
217
96
antibody fab heavy chain
antibody fab light chain
mus musculus
mus musculus
A
protein
leukocidin e
staphylococcaceae
53
23
0.7
HL
train
7t82_H_L
7t82
crystal structure of leukocidin e/centyrin s26/fab b438
no
toxin
2021-12-15
2023-01-11
x-ray diffraction
3.5
0.279
0.229
37098341
10.1016/j.chom.2023.04.004
0
auth_asym_id
FabH:FabL
IGHV1
IGKV2
H
L
QVQLQQSGAELMNPGASVKISCKSTGYKFSSYWIEWVKQRPGHGLEWMGEILPGSGSTNHNEKFKGKAIFTADASSNTAYMELSSLTSEDSAVYYCARTISTATDWFAYWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCHHHHHH
DVLMTQTPLSLPVSLGDQASISCRSSQTIVYSDGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRVSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLQQSGAELMNPGASVKISCKSTGYKFSSYWIEWVKQRPGHGLEWMGEILPGSGSTNHNEKFKGKAIFTADASSNTAYMELSSLTSEDSAVYYCARTISTATDWFAYWGQGTLVTVSAASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
DVLMTQTPLSLPVSLGDQASISCRSSQTIVYSDGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRVSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
21.244596
23.865124
229
219
216
217
220
217
96
antibody fab heavy chain
antibody fab light chain
mus musculus
mus musculus
B
protein
leukocidin e
staphylococcaceae
47
20
0.71
HL
train
7t86_D_C
7t86
crystal structure of fab cr5133 / phospho-sd peptide complex
no
toxin
2021-12-15
2023-01-11
x-ray diffraction
1.9
0.222
0.196
37098341
10.1016/j.chom.2023.04.004
0
auth_asym_id
FabH:FabL
IGHV3
IGKV3
D
C
EVQLVETGGGLVKPGGSLRLSCSASRFSFRDYYMTWIRQAPGKGPEWVSHISGSGSTIYYADSVRGRFTISRDNAKSSLYLQMDSLQADDTAVYYCARGGRATSYYWVHWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCHHHHHH
EIVLTQSPATLSLSPGERATLSCRASQSVSGYLGWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPLTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
EVQLVETGGGLVKPGGSLRLSCSASRFSFRDYYMTWIRQAPGKGPEWVSHISGSGSTIYYADSVRGRFTISRDNAKSSLYLQMDSLQADDTAVYYCARGGRATSYYWVHWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
EIVLTQSPATLSLSPGERATLSCRASQSVSGYLGWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPLTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
22.680891
22.580545
229
213
215
213
221
213
84
antibody fab cr5133 heavy chain
antibody fab cr5133 light chain
homo sapiens
homo sapiens
G
peptide
phospho-sd peptide
synthetic construct
14
6
0.75
HL
train
7t86_H_L
7t86
crystal structure of fab cr5133 / phospho-sd peptide complex
no
toxin
2021-12-15
2023-01-11
x-ray diffraction
1.9
0.222
0.196
37098341
10.1016/j.chom.2023.04.004
0
auth_asym_id
FabH:FabL
IGHV3
IGKV3
H
L
EVQLVETGGGLVKPGGSLRLSCSASRFSFRDYYMTWIRQAPGKGPEWVSHISGSGSTIYYADSVRGRFTISRDNAKSSLYLQMDSLQADDTAVYYCARGGRATSYYWVHWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCHHHHHH
EIVLTQSPATLSLSPGERATLSCRASQSVSGYLGWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPLTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
EVQLVETGGGLVKPGGSLRLSCSASRFSFRDYYMTWIRQAPGKGPEWVSHISGSGSTIYYADSVRGRFTISRDNAKSSLYLQMDSLQADDTAVYYCARGGRATSYYWVHWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
EIVLTQSPATLSLSPGERATLSCRASQSVSGYLGWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPLTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
22.603743
22.641804
229
213
217
213
222
213
86
antibody fab cr5133 heavy chain
antibody fab cr5133 light chain
homo sapiens
homo sapiens
I
peptide
phospho-sd peptide
synthetic construct
11
6
0.86
HL
train
7t86_B_A
7t86
crystal structure of fab cr5133 / phospho-sd peptide complex
no
toxin
2021-12-15
2023-01-11
x-ray diffraction
1.9
0.222
0.196
37098341
10.1016/j.chom.2023.04.004
0
auth_asym_id
FabH:FabL
IGHV3
IGKV3
B
A
EVQLVETGGGLVKPGGSLRLSCSASRFSFRDYYMTWIRQAPGKGPEWVSHISGSGSTIYYADSVRGRFTISRDNAKSSLYLQMDSLQADDTAVYYCARGGRATSYYWVHWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCHHHHHH
EIVLTQSPATLSLSPGERATLSCRASQSVSGYLGWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPLTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
EVQLVETGGGLVKPGGSLRLSCSASRFSFRDYYMTWIRQAPGKGPEWVSHISGSGSTIYYADSVRGRFTISRDNAKSSLYLQMDSLQADDTAVYYCARGGRATSYYWVHWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
EIVLTQSPATLSLSPGERATLSCRASQSVSGYLGWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPLTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
22.849205
22.72077
229
213
216
213
222
213
87
antibody fab cr5133 heavy chain
antibody fab cr5133 light chain
homo sapiens
homo sapiens
J
peptide
phospho-sd peptide
synthetic construct
11
6
0.86
HL
train
7t86_F_E
7t86
crystal structure of fab cr5133 / phospho-sd peptide complex
no
toxin
2021-12-15
2023-01-11
x-ray diffraction
1.9
0.222
0.196
37098341
10.1016/j.chom.2023.04.004
0
auth_asym_id
FabH:FabL
IGHV3
IGKV3
F
E
EVQLVETGGGLVKPGGSLRLSCSASRFSFRDYYMTWIRQAPGKGPEWVSHISGSGSTIYYADSVRGRFTISRDNAKSSLYLQMDSLQADDTAVYYCARGGRATSYYWVHWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCHHHHHH
EIVLTQSPATLSLSPGERATLSCRASQSVSGYLGWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPLTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
EVQLVETGGGLVKPGGSLRLSCSASRFSFRDYYMTWIRQAPGKGPEWVSHISGSGSTIYYADSVRGRFTISRDNAKSSLYLQMDSLQADDTAVYYCARGGRATSYYWVHWGPGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
EIVLTQSPATLSLSPGERATLSCRASQSVSGYLGWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGSSPLTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
22.466763
22.55699
229
213
216
213
222
213
85
antibody fab cr5133 heavy chain
antibody fab cr5133 light chain
homo sapiens
homo sapiens
K
peptide
phospho-sd peptide
synthetic construct
11
6
0.86
HL
train
7qji_B
7qji
x-ray structure of apo-elenrmt in complex with two nanobodies at 4.1a
yes
membrane protein
2021-12-16
2022-02-02
x-ray diffraction
4.1
0.316
0.267
35001872
10.7554/eLife.74589
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
QLVESGGGLVLAGGSLRLSCAASVRTFSHYALGWFRQAPGKEREFVAAIRWTGSSANYADSVKGRFTISRDNAKNTVDLRMNSLKPEDTAVYYCAARTVYRPGFEDPNEYAYWGQGTRVTV
N.A.
QLVESGGGLVLAGGSLRLSCAASVRTFSHYALGWFRQAPGKEREFVAAIRWTGSSANYADSVKGRFTISRDNAKNTVDLRMNSLKPEDTAVYYCAARTVYRPGFEDPNEYAYWGQGTRVTV
N.A.
13.423374
0
121
0
121
0
121
0
0
elen-nanobody-complex
N.A.
vicugna pacos
N.A.
A
protein
divalent metal cation transporter
vicugna pacos
29
11
1
H_only
train
7qji_C
7qji
x-ray structure of apo-elenrmt in complex with two nanobodies at 4.1a
yes
membrane protein
2021-12-16
2022-02-02
x-ray diffraction
4.1
0.316
0.267
35001872
10.7554/eLife.74589
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
QLQLVESGGGLVQPGGSLRLSCEASGKVFMINAMGWYRQAPGKQRELVAFISRRGNINYADSVKGRFTISRDNAKNTVYLQMNSLRPEDTAIYYCSADPRSNLDDGRYWGKGTPVTV
N.A.
QLQLVESGGGLVQPGGSLRLSCEASGKVFMINAMGWYRQAPGKQRELVAFISRRGNINYADSVKGRFTISRDNAKNTVYLQMNSLRPEDTAIYYCSADPRSNLDDGRYWGKGTPVTV
N.A.
13.533551
0
117
0
117
0
117
0
0
elen-nanobody-complex
N.A.
vicugna pacos
N.A.
A
protein
divalent metal cation transporter
vicugna pacos
34
14
0.93
H_only
train
7qji_F
7qji
x-ray structure of apo-elenrmt in complex with two nanobodies at 4.1a
yes
membrane protein
2021-12-16
2022-02-02
x-ray diffraction
4.1
0.316
0.267
35001872
10.7554/eLife.74589
0
auth_asym_id
VHH
IGHV3
N.A.
F
N.A.
QLQLVESGGGLVQPGGSLRLSCEASGKVFMINAMGWYRQAPGKQRELVAFISRRGNINYADSVKGRFTISRDNAKNTVYLQMNSLRPEDTAIYYCSADPRSNLDDGRYWGKGTPVTV
N.A.
QLQLVESGGGLVQPGGSLRLSCEASGKVFMINAMGWYRQAPGKQRELVAFISRRGNINYADSVKGRFTISRDNAKNTVYLQMNSLRPEDTAIYYCSADPRSNLDDGRYWGKGTPVTV
N.A.
13.533508
0
117
0
117
0
117
0
0
elen-nanobody-complex
N.A.
vicugna pacos
N.A.
E
protein
divalent metal cation transporter
vicugna pacos
32
13
0.93
H_only
train
7qji_G
7qji
x-ray structure of apo-elenrmt in complex with two nanobodies at 4.1a
yes
membrane protein
2021-12-16
2022-02-02
x-ray diffraction
4.1
0.316
0.267
35001872
10.7554/eLife.74589
0
auth_asym_id
VHH
IGHV3
N.A.
G
N.A.
QLVESGGGLVLAGGSLRLSCAASVRTFSHYALGWFRQAPGKEREFVAAIRWTGSSANYADSVKGRFTISRDNAKNTVDLRMNSLKPEDTAVYYCAARTVYRPGFEDPNEYAYWGQGTRVTV
N.A.
QLVESGGGLVLAGGSLRLSCAASVRTFSHYALGWFRQAPGKEREFVAAIRWTGSSANYADSVKGRFTISRDNAKNTVDLRMNSLKPEDTAVYYCAARTVYRPGFEDPNEYAYWGQGTRVTV
N.A.
13.423359
0
121
0
121
0
121
0
0
elen-nanobody-complex
N.A.
vicugna pacos
N.A.
E
protein
divalent metal cation transporter
vicugna pacos
29
11
1
H_only
train
7qiv_C
7qiv
structure of human c3b in complex with the ewe nanobody
no
immune system
2021-12-16
2022-02-16
x-ray diffraction
2.8
0.275
0.235
35935935
10.3389/fimmu.2022.872536
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
MEWEQVQLVETGGGLVQAGGSLRLSCAASGSIFSINAMGWFRQAPGKEREFVATINRSGGRTYYADSVKGRFTISRDNGKNMVYLQMHSLKPEDTAIYYCAAGTGWSPQTDNEYNYWGQGTQVTVSSHHHHHH
N.A.
QVQLVETGGGLVQAGGSLRLSCAASGSIFSINAMGWFRQAPGKEREFVATINRSGGRTYYADSVKGRFTISRDNGKNMVYLQMHSLKPEDTAIYYCAAGTGWSPQTDNEYNYWGQGTQVTVSSH
N.A.
13.749442
0
133
0
124
0
124
0
0
nanobody ewe
N.A.
lama glama
N.A.
B
protein
complement c3b alpha' chain
homo sapiens
36
13
0.72
H_only
train
7wbj_N
7wbj
cryo-em structure of n-terminal modified human vasoactive intestinal polypeptide receptor 2 (vip2r) in complex with pacap27 and gs
yes
structural protein
2021-12-16
2022-05-18
electron microscopy
3.42
N.A.
N.A.
35477937
10.1038/s41467-022-30041-z
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
MAQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS
N.A.
13.983407
0
140
0
128
0
128
0
0
nanobody-35
N.A.
synthetic construct
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
bos taurus;rattus norvegicus
50;30
13;11
0.52;0.79
H_only
train
7wbh_U_V
7wbh
overall structure of hu33 and spike
no
viral protein
2021-12-16
2022-10-26
electron microscopy
3.7
N.A.
N.A.
35078968
10.1038/s41392-022-00879-2
0
auth_asym_id
VH:VL
IGHV7
IGKV1
U
V
QVQLVQSGSELKKPGASVKVSCKASGYTFTDYGMNWVRQAPGQGLEWMGWINTYSGEPTYADDFRGRFVFSLDTSVSTAYLQICSLKAEDTAVYYCARGGNWDWYFDVWGQGTLVTVS
DIQMTQSPSSLSASVGDRVTITCRASQSVSNFLHWYQQKPGKAPKLLIYYASQSISGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSNTWPLTFGQGTKLEIK
QVQLVQSGSELKKPGASVKVSCKASGYTFTDYGMNWVRQAPGQGLEWMGWINTYSGEPTYADDFRGRFVFSLDTSVSTAYLQICSLKAEDTAVYYCARGGNWDWYFDVWGQGTLVTVS
DIQMTQSPSSLSASVGDRVTITCRASQSVSNFLHWYQQKPGKAPKLLIYYASQSISGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSNTWPLTFGQGTKLEIK
13.892058
13.45938
118
107
118
107
118
107
33
heavy chain of hu33
light chain of hu33
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome-related coronavirus
30
15
0.94
HL
train
7wbh_O_Q
7wbh
overall structure of hu33 and spike
no
viral protein
2021-12-16
2022-10-26
electron microscopy
3.7
N.A.
N.A.
35078968
10.1038/s41392-022-00879-2
0
auth_asym_id
VH:VL
IGHV7
IGKV1
O
Q
QVQLVQSGSELKKPGASVKVSCKASGYTFTDYGMNWVRQAPGQGLEWMGWINTYSGEPTYADDFRGRFVFSLDTSVSTAYLQICSLKAEDTAVYYCARGGNWDWYFDVWGQGTLVTVS
DIQMTQSPSSLSASVGDRVTITCRASQSVSNFLHWYQQKPGKAPKLLIYYASQSISGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSNTWPLTFGQGTKLEIK
QVQLVQSGSELKKPGASVKVSCKASGYTFTDYGMNWVRQAPGQGLEWMGWINTYSGEPTYADDFRGRFVFSLDTSVSTAYLQICSLKAEDTAVYYCARGGNWDWYFDVWGQGTLVTVS
DIQMTQSPSSLSASVGDRVTITCRASQSVSNFLHWYQQKPGKAPKLLIYYASQSISGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSNTWPLTFGQGTKLEIK
13.886086
13.496414
118
107
118
107
118
107
45
heavy chain of hu33
light chain of hu33
homo sapiens
homo sapiens
B
protein
spike glycoprotein
severe acute respiratory syndrome-related coronavirus
36
17
0.94
HL
train
7wbh_P_S
7wbh
overall structure of hu33 and spike
no
viral protein
2021-12-16
2022-10-26
electron microscopy
3.7
N.A.
N.A.
35078968
10.1038/s41392-022-00879-2
0
auth_asym_id
VH:VL
IGHV7
IGKV1
P
S
QVQLVQSGSELKKPGASVKVSCKASGYTFTDYGMNWVRQAPGQGLEWMGWINTYSGEPTYADDFRGRFVFSLDTSVSTAYLQICSLKAEDTAVYYCARGGNWDWYFDVWGQGTLVTVS
DIQMTQSPSSLSASVGDRVTITCRASQSVSNFLHWYQQKPGKAPKLLIYYASQSISGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSNTWPLTFGQGTKLEIK
QVQLVQSGSELKKPGASVKVSCKASGYTFTDYGMNWVRQAPGQGLEWMGWINTYSGEPTYADDFRGRFVFSLDTSVSTAYLQICSLKAEDTAVYYCARGGNWDWYFDVWGQGTLVTVS
DIQMTQSPSSLSASVGDRVTITCRASQSVSNFLHWYQQKPGKAPKLLIYYASQSISGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSNTWPLTFGQGTKLEIK
13.864447
13.451031
118
107
118
107
118
107
36
heavy chain of hu33
light chain of hu33
homo sapiens
homo sapiens
C
protein
spike glycoprotein
severe acute respiratory syndrome-related coronavirus
44
20
0.83
HL
train
7t8w_H_L
7t8w
structure of antibody 3g12 bound to respiratory syncytial virus g central conserved domain mutant s177q
yes
viral protein/immune system
2021-12-17
2022-02-09
x-ray diffraction
3.1
0.25
0.237
35266806
10.1128/jvi.02201-21
0
auth_asym_id
FabH:FabL
IGHV4
IGKV3
H
L
QLQLQESGPGLVKPSETLSLTCTVSGGSISSSNYYWGWIRQPPGKGLEWIASIHDSGSIYYNPSLRSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARHLVWFGELRNNWFDPWGQGTLVTVASASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH
EIVMTQSPATLSVSPGERATLSCRASQSVNSNLAWYQHKPGQAPRLLIYGASTRATGIPARFSGSGSGTDFTLTISSLQSEDFAVYYCQQYNNWPLFGPGTKVDLKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QLQLQESGPGLVKPSETLSLTCTVSGGSISSSNYYWGWIRQPPGKGLEWIASIHDSGSIYYNPSLRSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARHLVWFGELRNNWFDPWGQGTLVTVASASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
EIVMTQSPATLSVSPGERATLSCRASQSVNSNLAWYQHKPGQAPRLLIYGASTRATGIPARFSGSGSGTDFTLTISSLQSEDFAVYYCQQYNNWPLFGPGTKVDLKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
21.93037
23.28251
232
213
229
212
229
212
101
3g12 fab heavy chain
3g12 fab light chain
homo sapiens
homo sapiens
D
peptide
mature secreted glycoprotein g
human respiratory syncytial virus a2
43
16
0.67
HL
train