PDB_ID_chain
stringlengths
6
10
PDB_ID
stringlengths
4
4
Title
stringlengths
4
230
Mutation(s)
stringclasses
2 values
Classification
stringclasses
305 values
Deposit_date
stringdate
1976-03-17 00:00:00
2026-01-20 00:00:00
Release_date
stringdate
1976-05-19 00:00:00
2026-02-25 00:00:00
Method
stringclasses
5 values
Resolution
stringclasses
459 values
R_free
stringclasses
227 values
R_work
stringclasses
211 values
PMID
stringlengths
4
8
DOI
stringlengths
4
68
Model_index
int64
0
76
Asym_ID_type
stringclasses
2 values
Ab_type
stringclasses
30 values
H_subgroup
stringclasses
8 values
L_subgroup
stringclasses
19 values
H_chain_ID
stringclasses
60 values
L_chain_ID
stringclasses
58 values
H_fas_seq
stringlengths
4
919
L_fas_seq
stringlengths
4
627
H_filled_pdb_seq
stringlengths
4
896
L_filled_pdb_seq
stringlengths
4
523
H_mean_radius
float64
0
79.7
L_mean_radius
float64
0
84.3
H_fas_seq_len
int64
0
919
L_fas_seq_len
int64
0
627
H_pdb_seq_len
int64
0
879
L_pdb_seq_len
int64
0
523
H_filled_seq_len
int64
0
896
L_filled_seq_len
int64
0
523
HL_inf_res_num
int64
0
175
H_mol_name
stringlengths
2
331
L_mol_name
stringlengths
2
151
H_species
stringclasses
68 values
L_species
stringclasses
42 values
Ag_chain_ID(s)
stringclasses
279 values
Ag_type(s)
stringclasses
16 values
Ag_mol_name(s)
stringlengths
2
390
Ag_species
stringclasses
743 values
Ab_ag_inf_res_num
stringlengths
1
11
CDR_inf_res_num
stringclasses
444 values
CDR_inf_res_ratio
stringlengths
1
19
hl_label
stringclasses
3 values
split
stringclasses
1 value
8d01_A_B
8d01
the domain-swaped dimer of the hiv-1 cd4bs targeting antibody 21n13
no
viral protein/immune system
2022-05-25
2023-12-13
x-ray diffraction
2.46
0.229
0.189
39213338
10.1126/sciimmunol.adk9550
0
auth_asym_id
FabH:FabL
IGHV4
IGKV1
A
B
QVQLQESGPGRVKPSETLSLTCAVSDDSFGSSYFYWSWIRQAPGKGLEWIGYIAYSGGVRYNPSLSSRVTISRNIHERQFYLRLTSMTAADTAVYYCARHCEDDYGYYSAAQSYGLDSWGQGIAVTVSPSTKGPSVFPLAPSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
DIQMTQSPSSLSASVGDRVTITCRTSENVNNCLNWYQQKPGKAPKLLIYRTSTLQRGVPSRFSGTGSGTDYTLTISSLQSEDFGTYYCQHYYGTPLTFGGGTMVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
VQLQESGPGRVKPSETLSLTCAVSDDSFGSSYFYWSWIRQAPGKGLEWIGYIAYSGGVRYNPSLSSRVTISRNIHERQFYLRLTSMTAADTAVYYCARHCEDDYGYYSAAQSYGLDSWGQGIAVTVSPSTKGPSVFPLAPSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
DIQMTQSPSSLSASVGDRVTITCRTSENVNNCLNWYQQKPGKAPKLLIYRTSTLQRGVPSRFSGTGSGTDYTLTISSLQSEDFGTYYCQHYYGTPLTFGGGTMVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
26.153976
22.33893
225
213
206
213
224
213
44
21n13 fab heavy chain
21n13 fab light chain
macaca mulatta
macaca mulatta
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
8d01_H_L
8d01
the domain-swaped dimer of the hiv-1 cd4bs targeting antibody 21n13
no
viral protein/immune system
2022-05-25
2023-12-13
x-ray diffraction
2.46
0.229
0.189
39213338
10.1126/sciimmunol.adk9550
0
auth_asym_id
FabH:FabL
IGHV4
IGKV1
H
L
QVQLQESGPGRVKPSETLSLTCAVSDDSFGSSYFYWSWIRQAPGKGLEWIGYIAYSGGVRYNPSLSSRVTISRNIHERQFYLRLTSMTAADTAVYYCARHCEDDYGYYSAAQSYGLDSWGQGIAVTVSPSTKGPSVFPLAPSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
DIQMTQSPSSLSASVGDRVTITCRTSENVNNCLNWYQQKPGKAPKLLIYRTSTLQRGVPSRFSGTGSGTDYTLTISSLQSEDFGTYYCQHYYGTPLTFGGGTMVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
QVQLQESGPGRVKPSETLSLTCAVSDDSFGSSYFYWSWIRQAPGKGLEWIGYIAYSGGVRYNPSLSSRVTISRNIHERQFYLRLTSMTAADTAVYYCARHCEDDYGYYSAAQSYGLDSWGQGIAVTVSPSTKGPSVFPLAPSGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
DIQMTQSPSSLSASVGDRVTITCRTSENVNNCLNWYQQKPGKAPKLLIYRTSTLQRGVPSRFSGTGSGTDYTLTISSLQSEDFGTYYCQHYYGTPLTFGGGTMVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
27.17633
22.543407
225
213
223
213
223
213
48
21n13 fab heavy chain
21n13 fab light chain
macaca mulatta
macaca mulatta
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7xw7_A
7xw7
tshr-k1-70 complex
no
membrane protein
2022-05-26
2022-08-17
electron microscopy
5.5
N.A.
N.A.
35940204
10.1038/s41586-022-05173-3
0
auth_asym_id
scFv
N.A.
N.A.
A
N.A.
EVQLVQSGAEVKKPGQSLKISCKASGYSLTDNWIGWVRQKPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCVGLDWNYNPLRYWGPGTLVTVSSVLTQPPSVSAAPGQKVTISCSGSSSDIGSNYVSWYQQFPGTAPKLLIYDNNKRPSAIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSRLGIAVFGGGTQLTVL
N.A.
EVQLVQSGAEVKKPGQSLKISCKASGYSLTDNWIGWVRQKPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSINTAYLQWSSLKASDTAIYYCVGLDWNYNPLRYWGPGTLVTVSSVLTQPPSVSAAPGQKVTISCSGSSSDIGSNYVSWYQQFPGTAPKLLIYDNNKRPSAIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDSRLGIAVFGGGTQLTVL
N.A.
17.621504
0
227
0
227
0
227
0
0
k1-70 scfv
N.A.
homo sapiens
N.A.
R
protein
thyrotropin receptor
homo sapiens
59
26
0.9
H_only
train
7xw9_S
7xw9
cryo-em structure of the trh-bound human trhr-gq complex
no
structural protein
2022-05-26
2022-12-28
electron microscopy
2.7
N.A.
N.A.
36280665
10.1038/s41421-022-00477-0
0
auth_asym_id
scFv
N.A.
N.A.
S
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKGSLEVLFQGPAAAHHHHHHHH
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.496613
0
269
0
231
0
246
0
0
single fab chain (svfv16)
N.A.
synthetic construct
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(q) subunit alpha;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;rattus norvegicus
30;24
20;10
0.95;0.77
H_only
train
8d0z_H_L
8d0z
s728-1157 igg in complex with sars-cov-2-6p-mut7 spike protein (focused refinement)
yes
viral protein/immune system
2022-05-26
2023-03-22
electron microscopy
3.7
N.A.
N.A.
36862518
10.1172/JCI166844
0
auth_asym_id
VH:VL
IGHV3
IGLV3
H
L
EVQLVESGGGLVQPGGSLRLSCAASGLLVSRNYMNWVRQAPGKGLEWVSIIYSGGSTFYADSVEGRFTISRDESKNTLYLQMNSLRTDDTAVYYCARDLSDYGGIDCWGQGTLVTVSS
ELTQPLSVSMALGQTARISCGGDNVGSQNVHWYQQRPGQAPVLVIYRDSNRPSGIPERFSGSKSGNTATLTISRAQAGDEADYYCQVWDSSTVAFGGGTKLTVL
EVQLVESGGGLVQPGGSLRLSCAASGLLVSRNYMNWVRQAPGKGLEWVSIIYSGGSTFYADSVEGRFTISRDESKNTLYLQMNSLRTDDTAVYYCARDLSDYGGIDCWGQGTLVTVS
ELTQPLSVSMALGQTARISCGGDNVGSQNVHWYQQRPGQAPVLVIYRDSNRPSGIPERFSGSKSGNTATLTISRAQAGDEADYYCQVWDSSTVAFGGGTKLT
13.47795
12.7334
118
104
117
102
117
102
46
s728-1157 fab heavy chain variable region
s728-1157 fab light chain variable region
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
65
25
0.74
HL
train
8d0y_D_E
8d0y
crystal structure of hiv-1 bg505 sosipv8 trimer in complex with cd4bs targeting antibody 21n13 and interface targeting antibody 35o22 at 4.7 angstrom
no
viral protein/immune system
2022-05-26
2023-07-19
x-ray diffraction
4.7
0.298
0.268
39213338
10.1126/sciimmunol.adk9550
0
auth_asym_id
VH:VL
IGHV1
IGLV2
D
E
QGQLVQSGATTTKPGSSVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVNMTTDTEVPVTSFTSTGAAYMEIRNLTSDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLT
VLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLGQS
QGQLVQSGATTTKPGSSVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVNMTTDTEVPVTSFTSTGAAYMEIRNLTSDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLT
VLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLGQS
14.512092
13.742917
128
111
128
111
128
111
53
35o22scfv heavy chain variable
35o22scfv light chain variable
macaca mulatta
macaca mulatta
B
protein
bg505sosipv8 gp41
human immunodeficiency virus 1
27
11
0.79
HL
train
8d0y_H_L
8d0y
crystal structure of hiv-1 bg505 sosipv8 trimer in complex with cd4bs targeting antibody 21n13 and interface targeting antibody 35o22 at 4.7 angstrom
no
viral protein/immune system
2022-05-26
2023-07-19
x-ray diffraction
4.7
0.298
0.268
39213338
10.1126/sciimmunol.adk9550
0
auth_asym_id
FabH:FabL
IGHV4
IGKV1
H
L
QVQLQESGPGRVKPSETLSLTCAVSDDSFGSSYFYWSWIRQAPGKGLEWIGYIAYSGGVRYNPSLSSRVTISRNIHERQFYLRLTSMTAADTAVYYCARHCEDDYGYYSAAQSYGLDSWGQGIAVTVSPSTKGPSVFPLAPTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
DIQMTQSPSSLSASVGDRVTITCRTSENVNNCLNWYQQKPGKAPKLLIYRTSTLQRGVPSRFSGTGSGTDYTLTISSLQSEDFGTYYCQHYYGTPLTFGGGTMVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
QVQLQESGPGRVKPSETLSLTCAVSDDSFGSSYFYWSWIRQAPGKGLEWIGYIAYSGGVRYNPSLSSRVTISRNIHERQFYLRLTSMTAADTAVYYCARHCEDDYGYYSAAQSYGLDSWGQGIAVTVSPSTKGPSVFPLAPTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
DIQMTQSPSSLSASVGDRVTITCRTSENVNNCLNWYQQKPGKAPKLLIYRTSTLQRGVPSRFSGTGSGTDYTLTISSLQSEDFGTYYCQHYYGTPLTFGGGTMVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
23.812326
21.566435
225
213
225
213
225
213
103
21n13 fab heavy chain
21n13 fab light chain
macaca mulatta
macaca mulatta
G
protein
bg505sosipv8 gp120
human immunodeficiency virus 1
78
18
0.58
HL
train
8d21_H_L
8d21
cryo-em structure of the vrc321 clinical trial, vaccine-elicited, human antibody 1b06 in complex with a stabilized nc99 ha trimer
no
immune system/viral protein
2022-05-27
2023-04-12
electron microscopy
3.96
N.A.
N.A.
37075126
10.1126/scitranslmed.ade4976
0
auth_asym_id
VH:VL
IGHV3
IGKV3
H
L
EVQLLESGGGLVRPGGSLRLSCKASGFSFSRHGLSWVRQAPGKGLEWVSSISGSSLSRYYADSVKGRFTISRDNSQNTLYLQMNSLRVEDTAVFYCVKDRLDTAVPRGWFDSWGQGILVTVSS
EIVMTQSPATLSVSPGDRATLSCRASQSVSTELAWYQQKPGQAPRLLIYGASTRATDIPARFSGSGSGTEFTLTISSLQSEDFAVYFCQQYNNWPPITFGQGTRLEIK
EVQLLESGGGLVRPGGSLRLSCKASGFSFSRHGLSWVRQAPGKGLEWVSSISGSSLSRYYADSVKGRFTISRDNSQNTLYLQMNSLRVEDTAVFYCVKDRLDTAVPRGWFDSWGQGILVTVSS
EIVMTQSPATLSVSPGDRATLSCRASQSVSTELAWYQQKPGQAPRLLIYGASTRATDIPARFSGSGSGTEFTLTISSLQSEDFAVYFCQQYNNWPPITFGQGTRLEIK
14.221828
13.594703
123
108
123
108
123
108
45
1b06 heavy chain
1b06 light chain
homo sapiens
homo sapiens
B
protein
hemagglutinin ha2 chain
influenza a virus
39
15
0.83
HL
train
8d21_E_F
8d21
cryo-em structure of the vrc321 clinical trial, vaccine-elicited, human antibody 1b06 in complex with a stabilized nc99 ha trimer
no
immune system/viral protein
2022-05-27
2023-04-12
electron microscopy
3.96
N.A.
N.A.
37075126
10.1126/scitranslmed.ade4976
0
auth_asym_id
VH:VL
IGHV3
IGKV3
E
F
EVQLLESGGGLVRPGGSLRLSCKASGFSFSRHGLSWVRQAPGKGLEWVSSISGSSLSRYYADSVKGRFTISRDNSQNTLYLQMNSLRVEDTAVFYCVKDRLDTAVPRGWFDSWGQGILVTVSS
EIVMTQSPATLSVSPGDRATLSCRASQSVSTELAWYQQKPGQAPRLLIYGASTRATDIPARFSGSGSGTEFTLTISSLQSEDFAVYFCQQYNNWPPITFGQGTRLEIK
EVQLLESGGGLVRPGGSLRLSCKASGFSFSRHGLSWVRQAPGKGLEWVSSISGSSLSRYYADSVKGRFTISRDNSQNTLYLQMNSLRVEDTAVFYCVKDRLDTAVPRGWFDSWGQGILVTVSS
EIVMTQSPATLSVSPGDRATLSCRASQSVSTELAWYQQKPGQAPRLLIYGASTRATDIPARFSGSGSGTEFTLTISSLQSEDFAVYFCQQYNNWPPITFGQGTRLEIK
14.214336
13.582625
123
108
123
108
123
108
42
1b06 heavy chain
1b06 light chain
homo sapiens
homo sapiens
C
protein
hemagglutinin ha2 chain
influenza a virus
38
15
0.88
HL
train
8d21_J_K
8d21
cryo-em structure of the vrc321 clinical trial, vaccine-elicited, human antibody 1b06 in complex with a stabilized nc99 ha trimer
no
immune system/viral protein
2022-05-27
2023-04-12
electron microscopy
3.96
N.A.
N.A.
37075126
10.1126/scitranslmed.ade4976
0
auth_asym_id
VH:VL
IGHV3
IGKV3
J
K
EVQLLESGGGLVRPGGSLRLSCKASGFSFSRHGLSWVRQAPGKGLEWVSSISGSSLSRYYADSVKGRFTISRDNSQNTLYLQMNSLRVEDTAVFYCVKDRLDTAVPRGWFDSWGQGILVTVSS
EIVMTQSPATLSVSPGDRATLSCRASQSVSTELAWYQQKPGQAPRLLIYGASTRATDIPARFSGSGSGTEFTLTISSLQSEDFAVYFCQQYNNWPPITFGQGTRLEIK
EVQLLESGGGLVRPGGSLRLSCKASGFSFSRHGLSWVRQAPGKGLEWVSSISGSSLSRYYADSVKGRFTISRDNSQNTLYLQMNSLRVEDTAVFYCVKDRLDTAVPRGWFDSWGQGILVTVSS
EIVMTQSPATLSVSPGDRATLSCRASQSVSTELAWYQQKPGQAPRLLIYGASTRATDIPARFSGSGSGTEFTLTISSLQSEDFAVYFCQQYNNWPPITFGQGTRLEIK
14.221196
13.577197
123
108
123
108
123
108
43
1b06 heavy chain
1b06 light chain
homo sapiens
homo sapiens
G
protein
hemagglutinin ha2 chain
influenza a virus
40
16
0.89
HL
train
8d29_A_B
8d29
crystal structure of theophylline aptamer - apo form
no
rna/immune system
2022-05-28
2022-11-30
x-ray diffraction
1.81
0.211
0.175
36413497
10.1073/pnas.2213117119
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
A
B
EVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPNTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPNTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
22.262453
23.410797
229
214
223
213
223
213
100
fab heavy chain
fab light chain
homo sapiens
homo sapiens
C
RNA
rna (34-mer)
synthetic construct
32
21
0.91
HL
train
8d29_H_L
8d29
crystal structure of theophylline aptamer - apo form
no
rna/immune system
2022-05-28
2022-11-30
x-ray diffraction
1.81
0.211
0.175
36413497
10.1073/pnas.2213117119
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
EVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPNTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPNTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
22.281721
23.379574
229
214
220
214
223
214
99
fab heavy chain
fab light chain
homo sapiens
homo sapiens
C;R
RNA;RNA
rna (34-mer);rna (34-mer)
synthetic construct;synthetic construct
17;35
6;21
0.67;0.88
HL
train
8d29_D_E
8d29
crystal structure of theophylline aptamer - apo form
no
rna/immune system
2022-05-28
2022-11-30
x-ray diffraction
1.81
0.211
0.175
36413497
10.1073/pnas.2213117119
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
D
E
EVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPNTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPNTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
22.355402
23.379152
229
214
224
213
224
213
101
fab heavy chain
fab light chain
homo sapiens
homo sapiens
F
RNA
rna (34-mer)
synthetic construct
32
21
0.91
HL
train
8d29_G_I
8d29
crystal structure of theophylline aptamer - apo form
no
rna/immune system
2022-05-28
2022-11-30
x-ray diffraction
1.81
0.211
0.175
36413497
10.1073/pnas.2213117119
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
G
I
EVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPNTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPNTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
22.081797
23.347395
229
214
218
213
223
213
102
fab heavy chain
fab light chain
homo sapiens
homo sapiens
J
RNA
rna (34-mer)
synthetic construct
33
20
0.91
HL
train
8d36_H_L
8d36
crystal structure of sars-cov-2 fusion peptide in complex with neutralizing antibody cov44-62
no
immune system
2022-05-31
2022-07-27
x-ray diffraction
1.45
0.219
0.197
35857439
10.1126/science.abq3773
0
auth_asym_id
FabH:FabL
IGHV1
IGLV2
H
L
QMQLMQSGAEVKKPGASVTVSCKASGDTFSDYRIHWVRQAPGQGLEWMGRMNPKSGDTNFAQKFQGRVTMTRDMSINTAYMTLSGLTFDDTALYYCASLLIVGGFDPLDDFEVWGQGTMVTISSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
QSALTQPPSASGSPGQSVTISCSGTSSDVGGYNFVSWYQHHPGKAPKILIYEVTKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYGGTNNLLFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
QMQLMQSGAEVKKPGASVTVSCKASGDTFSDYRIHWVRQAPGQGLEWMGRMNPKSGDTNFAQKFQGRVTMTRDMSINTAYMTLSGLTFDDTALYYCASLLIVGGFDPLDDFEVWGQGTMVTISSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
QSALTQPPSASGSPGQSVTISCSGTSSDVGGYNFVSWYQHHPGKAPKILIYEVTKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYGGTNNLLFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP
20.649143
23.799034
227
216
218
212
225
212
99
neutralizing antibody cov44-62 heavy chain
neutralizing antibody cov44-62 light chain
homo sapiens
homo sapiens
F
peptide
spike protein s2 fusion peptide
severe acute respiratory syndrome coronavirus 2
39
22
0.85
HL
train
7xy3_D
7xy3
cryo-em structure of sars-cov-2 spike in complex with vhh14
yes
viral protein/immune system
2022-05-31
2023-09-13
electron microscopy
4.6
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VHH
IGHV3
N.A.
D
N.A.
QLQLVESGGGSVQSGGSLRLSCAASGYTYKTYYETYSMGWFRQAPGKEREGVAAINSDGETSYADSVKGRFTISQDNAKKTLYLQMNSLKPEDMGMYYCAADPAWQPAFLLLRSSGYNYWGQGTQVTVSSAHHSEDPHGQAGQHHHHHHGAYPYDVPDYAS
N.A.
QLQLVESGGGSVQSGGSLRLSCAASGYTYKTYYETYSMGWFRQAPGKEREGVAAINSDGETSYADSVKGRFTISQDNAKKTLYLQMNSLKPEDMGMYYCAADPAWQPAFLLLRSSGYNYWGQGTQVTVSS
N.A.
14.02977
0
161
0
130
0
130
0
0
vhh14
N.A.
camelus bactrianus
N.A.
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
43
20
1
H_only
train
8a1e_B_C
8a1e
rabies virus glycoprotein in complex with fab fragments of 17c7 and 1112-1 neutralizing antibodies
no
viral protein
2022-06-01
2022-08-17
electron microscopy
2.83
N.A.
N.A.
35985336
10.1016/j.chom.2022.07.014
0
auth_asym_id
VH:VL
IGHV1
IGKV1
B
C
QVQLQQPGAELLKPGTSMKLSCKASGYTFSNYWMHWVKLRPGQGFEWIGEINPFNGGTNFNEKFKSKATLTVDRSSSTAYMQLSSVTSEDSAVYYCTIPLSDYGDWFFAVWGAGTTVTVSS
DIVMTQSHKFMSTSIGDRVSITCKASQDVSTAVAWYRQKPGQSPKLLIYSASYRSTGVPDRFTGSGSGTDFTFTISSVQAEDLAVFYCQQHYSAPLTFGAGTKLELK
VQLQQPGAELLKPGTSMKLSCKASGYTFSNYWMHWVKLRPGQGFEWIGEINPFNGGTNFNEKFKSKATLTVDRSSSTAYMQLSSVTSEDSAVYYCTIPLSDYGDWFFAVWGAGTTVT
DIVMTQSHKFMSTSIGDRVSITCKASQDVSTAVAWYRQKPGQSPKLLIYSASYRSTGVPDRFTGSGSGTDFTFTISSVQAEDLAVFYCQQHYSAPLTFGAGTKL
13.508605
12.77529
121
107
117
101
117
104
46
fab 1112-1 heavy chain variable domain
fab 1112-1 light chain variable domain
mus musculus
mus musculus
A
protein
glycoprotein
rabies virus strain pasteur vaccin
56
21
0.78
HL
train
8a1e_D_E
8a1e
rabies virus glycoprotein in complex with fab fragments of 17c7 and 1112-1 neutralizing antibodies
no
viral protein
2022-06-01
2022-08-17
electron microscopy
2.83
N.A.
N.A.
35985336
10.1016/j.chom.2022.07.014
0
auth_asym_id
VH:VL
IGHV3
IGKV3
D
E
EVQLVESGGGVVQPGRSLRLSCAASGFTFSTYAMHWVRQAPGKGLEWVAVVSYDGRTKDYADSVKGRFTISRDNSKNTLYLQMNSLRTEDTAVYFCARERFSGAYFDYWGQGTLVTVSS
EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYSCQQRNNWPPTFGGGTKVEIKRA
EVQLVESGGGVVQPGRSLRLSCAASGFTFSTYAMHWVRQAPGKGLEWVAVVSYDGRTKDYADSVKGRFTISRDNSKNTLYLQMNSLRTEDTAVYFCARERFSGAYFDYWGQGTLVTVSS
EIVLTQSPATLSLSPGERATLSCRASQSVSSYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSGSGTDFTLTISSLEPEDFAVYSCQQRNNWPPTFGGGTKVEIKRA
13.628255
13.511991
119
109
119
109
119
109
43
fab 17c7 heavy chain variable domain
fab 17c7 light chain variable domain
homo sapiens
homo sapiens
A
protein
glycoprotein
rabies virus strain pasteur vaccin
48
21
0.88
HL
train
8d3a_H_L
8d3a
crystal structure of dh475 fab in complex with man9
no
immune system/antigen
2022-06-01
2022-10-12
x-ray diffraction
2.9
0.272
0.229
36225920
10.3389/fimmu.2022.962939
0
auth_asym_id
FabH:FabL
IGHV3
IGLV4
H
L
EVQLLESGGGLVQPGGSLKLSCAASGFAVNNYPMNWVRQAPGKGLEWVSSIIGSGSRASYADSVKGRFTISRDNGKDIVYLQMNNLRADDTALYYCVKDSSTAWWDKPAASEFDFWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDK
QLVLTQSPSASASLGASVKLTCTLNSGNTNFAVAWHQQQAGKGPRYLMTINSDGRQSRGDGIPDRFSGSTSGADRYLTISSLHFEDEGDYYCQAWTADLHVFGPGTRVAVVGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
EVQLLESGGGLVQPGGSLKLSCAASGFAVNNYPMNWVRQAPGKGLEWVSSIIGSGSRASYADSVKGRFTISRDNGKDIVYLQMNNLRADDTALYYCVKDSSTAWWDKPAASEFDFWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
QLVLTQSPSASASLGASVKLTCTLNSGNTNFAVAWHQQQAGKGPRYLMTINSDGRQSRGDGIPDRFSGSTSGADRYLTISSLHFEDEGDYYCQAWTADLHVFGPGTRVAVVGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
22.180023
23.91556
231
217
227
214
227
214
90
dh475 fab heavy chain
dh475 fab light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7xy8_H_L
7xy8
crystal structure of antibody fab fragment in complex with cd147(emmpirin)
no
protein binding
2022-06-01
2022-11-23
x-ray diffraction
2.3
0.281
0.236
36385956
10.1155/2022/3552793
0
auth_asym_id
FabH:FabL
IGHV1
IGKV1
H
L
QVQLVQSGAEVKKPGASVKVSCKASGYTFTSDFMHWVRQAPGQGLEWMGWIYPGDGDTEYNQKFQGRVTLTRDTSISTAYMELSRLRSDDTAVYYCARGRGYVMDAWGQGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESKYGPPCPPCPAPEFLGGPS
DIQMTQSPSSLSASVGDRVTITCRASQGISNYLNWYQQKPGKAIKPLIYYTSNLQSGVPSRFSGSGSGTDYTLTISSLQPEDFATYFCQQYDSSPRTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVQSGAEVKKPGASVKVSCKASGYTFTSDFMHWVRQAPGQGLEWMGWIYPGDGDTEYNQKFQGRVTLTRDTSISTAYMELSRLRSDDTAVYYCARGRGYVMDAWGQGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESK
DIQMTQSPSSLSASVGDRVTITCRASQGISNYLNWYQQKPGKAIKPLIYYTSNLQSGVPSRFSGSGSGTDYTLTISSLQPEDFATYFCQQYDSSPRTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
21.743221
23.147142
236
214
212
214
218
214
89
heavy chain
light chain
synthetic construct
synthetic construct
A
protein
isoform 2 of basigin
homo sapiens
52
19
0.66
HL
train
7xy8_I_M
7xy8
crystal structure of antibody fab fragment in complex with cd147(emmpirin)
no
protein binding
2022-06-01
2022-11-23
x-ray diffraction
2.3
0.281
0.236
36385956
10.1155/2022/3552793
0
auth_asym_id
FabH:FabL
IGHV1
IGKV1
I
M
QVQLVQSGAEVKKPGASVKVSCKASGYTFTSDFMHWVRQAPGQGLEWMGWIYPGDGDTEYNQKFQGRVTLTRDTSISTAYMELSRLRSDDTAVYYCARGRGYVMDAWGQGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESKYGPPCPPCPAPEFLGGPS
DIQMTQSPSSLSASVGDRVTITCRASQGISNYLNWYQQKPGKAIKPLIYYTSNLQSGVPSRFSGSGSGTDYTLTISSLQPEDFATYFCQQYDSSPRTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVQSGAEVKKPGASVKVSCKASGYTFTSDFMHWVRQAPGQGLEWMGWIYPGDGDTEYNQKFQGRVTLTRDTSISTAYMELSRLRSDDTAVYYCARGRGYVMDAWGQGTTVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESK
DIQMTQSPSSLSASVGDRVTITCRASQGISNYLNWYQQKPGKAIKPLIYYTSNLQSGVPSRFSGSGSGTDYTLTISSLQPEDFATYFCQQYDSSPRTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
22.492615
22.986645
236
214
218
214
218
214
100
heavy chain
light chain
synthetic construct
synthetic construct
A;B
protein;protein
isoform 2 of basigin;isoform 2 of basigin
homo sapiens;homo sapiens
37;38
5;17
0.31;0.77
HL
train
8d47_H_L
8d47
fp.006 fab in complex with sars-cov-2 fusion peptide
no
antiviral protein
2022-06-01
2022-12-21
x-ray diffraction
2
0.238
0.184
36701425
10.1126/sciimmunol.ade0958
0
auth_asym_id
FabH:FabL
IGHV3
IGKV3
H
L
EVQLVESGGGVVQPGGSLRLSCAASGFNFNNYALHWVRQAPGKGLEWVAIISYEARNKKYGVSVMGRFSISRDNSKSIMYLEMNSLRVEDTGVYYCARDLFLSDYDRSGYDPTRGGFDHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
EIVMTQSPATLSVSPGERATLSCRASQSVSSSLAWYQHRFGQAPRLLISGASTRATGIPGRFSGSGSGTEFTLTISSLQSEDVAVYYCQQYGDWPLVTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGVVQPGGSLRLSCAASGFNFNNYALHWVRQAPGKGLEWVAIISYEARNKKYGVSVMGRFSISRDNSKSIMYLEMNSLRVEDTGVYYCARDLFLSDYDRSGYDPTRGGFDHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
EIVMTQSPATLSVSPGERATLSCRASQSVSSSLAWYQHRFGQAPRLLISGASTRATGIPGRFSGSGSGTEFTLTISSLQSEDVAVYYCQQYGDWPLVTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
22.728071
22.409857
242
215
225
212
231
212
103
fp.006 heavy chain
fp.006 light chain
homo sapiens
homo sapiens
C
peptide
sars-cov-2 fusion peptide
severe acute respiratory syndrome coronavirus 2
31
17
0.85
HL
train
8d47_B_A
8d47
fp.006 fab in complex with sars-cov-2 fusion peptide
no
antiviral protein
2022-06-01
2022-12-21
x-ray diffraction
2
0.238
0.184
36701425
10.1126/sciimmunol.ade0958
0
auth_asym_id
FabH:FabL
IGHV3
IGKV3
B
A
EVQLVESGGGVVQPGGSLRLSCAASGFNFNNYALHWVRQAPGKGLEWVAIISYEARNKKYGVSVMGRFSISRDNSKSIMYLEMNSLRVEDTGVYYCARDLFLSDYDRSGYDPTRGGFDHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
EIVMTQSPATLSVSPGERATLSCRASQSVSSSLAWYQHRFGQAPRLLISGASTRATGIPGRFSGSGSGTEFTLTISSLQSEDVAVYYCQQYGDWPLVTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGVVQPGGSLRLSCAASGFNFNNYALHWVRQAPGKGLEWVAIISYEARNKKYGVSVMGRFSISRDNSKSIMYLEMNSLRVEDTGVYYCARDLFLSDYDRSGYDPTRGGFDHWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS
EIVMTQSPATLSVSPGERATLSCRASQSVSSSLAWYQHRFGQAPRLLISGASTRATGIPGRFSGSGSGTEFTLTISSLQSEDVAVYYCQQYGDWPLVTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
22.750317
22.929226
242
215
231
213
232
213
105
fp.006 heavy chain
fp.006 light chain
homo sapiens
homo sapiens
D
peptide
sars-cov-2 fusion peptide
severe acute respiratory syndrome coronavirus 2
27
16
0.89
HL
train
8d48_H_L
8d48
sd1.040 fab in complex with sars-cov-2 spike 2p glycoprotein
yes
antiviral protein
2022-06-01
2023-01-25
electron microscopy
3.7
N.A.
N.A.
36701425
10.1126/sciimmunol.ade0958
0
auth_asym_id
FabH:FabL
IGHV1
IGKV4
H
L
QVQLVQSGAEVKKPGASVKVSCKASGYTFTSFYIHWVRQAPGQGLEWMGIIDPSGGSTSYPQKFQGRVTMTRDTSTSTVYMDLSSLRSEDTAVYYCTRDGSAGDNSWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
DIVMTQSPDSLAVSLGERATINCKSSRNVLYSSNNKNYLAWYQQKPGQPPKLLIYWASARESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYNTPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVQSGAEVKKPGASVKVSCKASGYTFTSFYIHWVRQAPGQGLEWMGIIDPSGGSTSYPQKFQGRVTMTRDTSTSTVYMDLSSLRSEDTAVYYCTRDGSAGDNSWFDPWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS
DIVMTQSPDSLAVSLGERATINCKSSRNVLYSSNNKNYLAWYQQKPGQPPKLLIYWASARESGVPDRFSGSGSGTDFTLTISSLQAEDVAVYYCQQYYNTPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
23.575354
24.506317
233
220
223
220
223
220
82
sd1.040 fab heavy chain
sd1.040 fab light chain
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
37
16
0.84
HL
train
7xz5_N
7xz5
gpr119-gs-lpc complex
no
membrane protein
2022-06-02
2022-08-24
electron microscopy
3.1
N.A.
N.A.
35970999
10.1038/s41594-022-00816-5
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
MQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS
N.A.
13.898181
0
139
0
128
0
128
0
0
nanobody35
N.A.
lama glama
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
42;33
12;12
0.57;0.71
H_only
train
8d4r_H_L
8d4r
crystal structure of mosaic hiv-1 envelope (mosm3.2) in complex with antibodies pgt124 and 35o22 at 3.8 angstrom
no
viral protein/immune system
2022-06-02
2023-12-13
x-ray diffraction
3.81
0.296
0.277
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV4
IGLV3
H
L
VQLQESGPGLVRPSETLSVTCIVSGGSISNYYWTWIRQSPGKGLEWIGYISDRETTTYNPSLNSRAVISRDTSKNQLSLQLRSVTTADTAIYFCATARRGQRIYGVVSFGEFFYYYYMDVWGKGTAVTVSSASTKGPSVFPLAPSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
YVSPLSVALGETARISCGRQALGSRAVQWYQHKPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTTATLTISGVEVGDEADYYCHMWDSRSGFSWSFGGATRLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPT
VQLQESGPGLVRPSETLSVTCIVSGGSISNYYWTWIRQSPGKGLEWIGYISDRETTTYNPSLNSRAVISRDTSKNQLSLQLRSVTTADTAIYFCATARRGQRIYGVVSFGEFFYYYYMDVWGKGTAVTVSSASTKGPSVFPLAPSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
YVSPLSVALGETARISCGRQALGSRAVQWYQHKPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTTATLTISGVEVGDEADYYCHMWDSRSGFSWSFGGATRLTVLSQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPT
22.386936
24.16932
226
210
226
210
226
210
99
pgt124 fab heavy chain
pgt124 fab light chain
homo sapiens
homo sapiens
G
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
24
10
0.91
HL
train
8d4r_D_E
8d4r
crystal structure of mosaic hiv-1 envelope (mosm3.2) in complex with antibodies pgt124 and 35o22 at 3.8 angstrom
no
viral protein/immune system
2022-06-02
2023-12-13
x-ray diffraction
3.81
0.296
0.277
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV1
IGLV2
D
E
EGQLVQSGAELKKPGASVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVIMTTDTEVPVTSFTSTGAAYMEIRNLKFDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVSSASTKGPSVFPLGCLVKDYFPEPVTVHTFPAVLQSSGLYSLSSCNVNHKPSNTKVDK
SVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLGQSKANPSVTLFPPSSEELQANKATLVCLISDFYPGAVTETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTSTVEKTV
EGQLVQSGAELKKPGASVKISCKTSGYRFNFYHINWIRQTAGRGPEWMGWISPYSGDKNLAPAFQDRVIMTTDTEVPVTSFTSTGAAYMEIRNLKFDDTGTYFCAKGLLRDGSSTWLPYLWGQGTLLTVSSASTKGPSVFPLGCLVKDYFPEPVTVHTFPAVLQSSGLYSLSSCNVNHKPSNTKVDK
SVLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSVLGQSKANPSVTLFPPSSEELQANKATLVCLISDFYPGAVTETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTSTVEKTV
18.716621
22.96655
187
192
187
192
187
192
76
35o22 fab heavy chain
35o22 fab light chain
homo sapiens
homo sapiens
G;B
protein;protein
envelope glycoprotein gp120;envelope glycoprotein gp41
human immunodeficiency virus 1;human immunodeficiency virus 1
19;23
5;9
0.45;0.82
HL
train
8d54_A_B
8d54
anti hiv gp120/cd4 complex antibody cg10 fab
no
immune system
2022-06-03
2022-12-14
x-ray diffraction
1.4
0.188
0.169
36448805
10.1128/jvi.01082-22
0
auth_asym_id
FabH:FabL
IGHV1
IGKV7
A
B
QVQLKQSGTELVRPGTSVKMSCKAAGYTFTDYWIGWVKQRPGHGLEWIGDFYPGGDYTLYSENFMGKASLTADTSSNTAYMQLSSLTSEDSAIYYCARGHYYGYSYAWFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKT
DIVLTQSPASLAVSLGQRATISCKASQSVDYDGDSYMNWYQQKPGQPPKLLIYAASNLESGIPARFSGSGSGTDFTLNIHPVGEEDAATYYCQQSHEDPWTFGGGTMLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLKQSGTELVRPGTSVKMSCKAAGYTFTDYWIGWVKQRPGHGLEWIGDFYPGGDYTLYSENFMGKASLTADTSSNTAYMQLSSLTSEDSAIYYCARGHYYGYSYAWFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
DIVLTQSPASLAVSLGQRATISCKASQSVDYDGDSYMNWYQQKPGQPPKLLIYAASNLESGIPARFSGSGSGTDFTLNIHPVGEEDAATYYCQQSHEDPWTFGGGTMLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
21.513578
23.552557
228
218
222
218
225
218
101
cg10 fab heavy chain
cg10 fab light chain
mus musculus
mus musculus
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
8d53_E
8d53
crystal structure of mosaic hiv-1 envelope (mosm3.3) in complex with antibodies pgt124 and 35o22 at 3.25 angstrom
no
viral protein/immune system
2022-06-03
2024-07-24
x-ray diffraction
3.24
0.331
0.317
N.A.
N.A.
0
auth_asym_id
VL
N.A.
IGLV2
N.A.
E
N.A.
VLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSV
N.A.
VLTQSASVSGSLGQSVTISCTGPNSVCCSHKSISWYQWPPGRAPTLIIYEDNERAPGISPRFSGYKSYWSAYLTISDLRPEDETTYYCCSYTHNSGCVFGTGTKVSV
0
13.168685
0
107
0
107
0
107
0
N.A.
35o22scfv light chain variable
N.A.
homo sapiens
D
protein
35o22scfv heavy chain variable
homo sapiens
31
8
0.5
L_only
train
8d53_H_L
8d53
crystal structure of mosaic hiv-1 envelope (mosm3.3) in complex with antibodies pgt124 and 35o22 at 3.25 angstrom
no
viral protein/immune system
2022-06-03
2024-07-24
x-ray diffraction
3.24
0.331
0.317
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV4
IGLV3
H
L
QVQLQESGPGLVRPSETLSVTCIVSGGSISNYYWTWIRQSPGKGLEWIGYISDRETTTYNPSLNSRAVISRDTSKNQLSLQLRSVTTADTAIYFCATARRGQRIYGVVSFGEFFYYYYMDVWGKGTAVTVSSASTKGPSVFPLAPSSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
SYVSPLSVALGETARISCGRQALGSRAVQWYQHKPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTTATLTISGVEVGDEADYYCHMWDSRSGFSWSFGGATRLTVLSQPKAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTEC
QVQLQESGPGLVRPSETLSVTCIVSGGSISNYYWTWIRQSPGKGLEWIGYISDRETTTYNPSLNSRAVISRDTSKNQLSLQLRSVTTADTAIYFCATARRGQRIYGVVSFGEFFYYYYMDVWGKGTAVTVSSASTKGPSVFPLAPSSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
SYVSPLSVALGETARISCGRQALGSRAVQWYQHKPGQAPILLIYNNQDRPSGIPERFSGTPDINFGTTATLTISGVEVGDEADYYCHMWDSRSGFSWSFGGATRLTVLSQPKAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHKSYSCQVTHEGSTVEKTVAPTEC
22.605038
24.691477
229
212
229
212
229
212
99
pgt124 fab heavy chain
pgt124 fab light chain
homo sapiens
homo sapiens
G
protein
envelope glycoprotein gp120
human immunodeficiency virus 1
25
10
0.91
HL
train
7y0c_M_N
7y0c
crystal structure of bd55-1403 and sars-cov-2 omicron rbd
yes
viral protein/immune system
2022-06-04
2022-09-28
x-ray diffraction
2.94
0.278
0.202
36493787
10.1016/j.celrep.2022.111845
0
auth_asym_id
FabH:FabL
IGHV1
IGKV3
M
N
QVQLVQSGAEMKKPGSSVKVSCQASGGTFSTYVISWVRQAPGQGLEWMGGIIPIFNTPHYAQKFQGRVTITADESTSTAYMELSSLTSGDTAVYYCARVSQWELLVYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
EIVLTQSPGTLSLSPGERATLSCRASQSINSNYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGVSPRWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
QVQLVQSGAEMKKPGSSVKVSCQASGGTFSTYVISWVRQAPGQGLEWMGGIIPIFNTPHYAQKFQGRVTITADESTSTAYMELSSLTSGDTAVYYCARVSQWELLVYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
EIVLTQSPGTLSLSPGERATLSCRASQSINSNYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGVSPRWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
23.102032
22.868803
218
214
218
214
218
214
98
bd55-1403 fab heavy chain
bd55-1403 fab light chain
homo sapiens
homo sapiens
E
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
45
19
0.79
HL
train
7y0c_A_B
7y0c
crystal structure of bd55-1403 and sars-cov-2 omicron rbd
yes
viral protein/immune system
2022-06-04
2022-09-28
x-ray diffraction
2.94
0.278
0.202
36493787
10.1016/j.celrep.2022.111845
0
auth_asym_id
FabH:FabL
IGHV1
IGKV3
A
B
QVQLVQSGAEMKKPGSSVKVSCQASGGTFSTYVISWVRQAPGQGLEWMGGIIPIFNTPHYAQKFQGRVTITADESTSTAYMELSSLTSGDTAVYYCARVSQWELLVYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
EIVLTQSPGTLSLSPGERATLSCRASQSINSNYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGVSPRWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
QVQLVQSGAEMKKPGSSVKVSCQASGGTFSTYVISWVRQAPGQGLEWMGGIIPIFNTPHYAQKFQGRVTITADESTSTAYMELSSLTSGDTAVYYCARVSQWELLVYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
EIVLTQSPGTLSLSPGERATLSCRASQSINSNYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYGVSPRWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
22.466105
23.129965
218
214
218
214
218
214
104
bd55-1403 fab heavy chain
bd55-1403 fab light chain
homo sapiens
homo sapiens
R
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
42
18
0.82
HL
train
8d5c_H_L
8d5c
anti-hiv-1 gp120-scd4 complex antibody cg10 fab in complex with b41-scd4
yes
viral protein/immune system
2022-06-04
2022-11-16
electron microscopy
3.9
N.A.
N.A.
36448805
10.1128/jvi.01082-22
0
auth_asym_id
VH:VL
IGHV1
IGKV7
H
L
QVQLKQSGTELVRPGTSVKMSCKAAGYTFTDYWIGWVKQRPGHGLEWIGDFYPGGDYTLYSENFMGKASLTADTSSNTAYMQLSSLTSEDSAIYYCARGHYYGYSYAWFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKT
DIVLTQSPASLAVSLGQRATISCKASQSVDYDGDSYMNWYQQKPGQPPKLLIYAASNLESGIPARFSGSGSGTDFTLNIHPVGEEDAATYYCQQSHEDPWTFGGGTMLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLKQSGTELVRPGTSVKMSCKAAGYTFTDYWIGWVKQRPGHGLEWIGDFYPGGDYTLYSENFMGKASLTADTSSNTAYMQLSSLTSEDSAIYYCARGHYYGYSYAWFAYWGQGTLVTVSSA
DIVLTQSPASLAVSLGQRATISCKASQSVDYDGDSYMNWYQQKPGQPPKLLIYAASNLESGIPARFSGSGSGTDFTLNIHPVGEEDAATYYCQQSHEDPWTFGGGTMLEIKRT
14.361154
14.108158
228
218
122
113
123
113
37
cg10 fab heavy chain
cg10 fab light chain
mus musculus
mus musculus
A;D
protein;protein
envelope glycoprotein gp160;t-cell surface glycoprotein cd4
human immunodeficiency virus;homo sapiens
32;21
13;7
0.93;0.58
HL
train
8d5c_I_J
8d5c
anti-hiv-1 gp120-scd4 complex antibody cg10 fab in complex with b41-scd4
yes
viral protein/immune system
2022-06-04
2022-11-16
electron microscopy
3.9
N.A.
N.A.
36448805
10.1128/jvi.01082-22
0
auth_asym_id
VH:VL
IGHV1
IGKV7
I
J
QVQLKQSGTELVRPGTSVKMSCKAAGYTFTDYWIGWVKQRPGHGLEWIGDFYPGGDYTLYSENFMGKASLTADTSSNTAYMQLSSLTSEDSAIYYCARGHYYGYSYAWFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKT
DIVLTQSPASLAVSLGQRATISCKASQSVDYDGDSYMNWYQQKPGQPPKLLIYAASNLESGIPARFSGSGSGTDFTLNIHPVGEEDAATYYCQQSHEDPWTFGGGTMLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLKQSGTELVRPGTSVKMSCKAAGYTFTDYWIGWVKQRPGHGLEWIGDFYPGGDYTLYSENFMGKASLTADTSSNTAYMQLSSLTSEDSAIYYCARGHYYGYSYAWFAYWGQGTLVTVSSA
DIVLTQSPASLAVSLGQRATISCKASQSVDYDGDSYMNWYQQKPGQPPKLLIYAASNLESGIPARFSGSGSGTDFTLNIHPVGEEDAATYYCQQSHEDPWTFGGGTMLEIKRT
14.18199
14.025619
228
218
119
113
123
113
42
cg10 fab heavy chain
cg10 fab light chain
mus musculus
mus musculus
B;E
protein;protein
envelope glycoprotein gp160;t-cell surface glycoprotein cd4
human immunodeficiency virus;homo sapiens
38;15
16;8
0.8;0.89
HL
train
8d5c_P_Q
8d5c
anti-hiv-1 gp120-scd4 complex antibody cg10 fab in complex with b41-scd4
yes
viral protein/immune system
2022-06-04
2022-11-16
electron microscopy
3.9
N.A.
N.A.
36448805
10.1128/jvi.01082-22
0
auth_asym_id
VH:VL
IGHV1
IGKV7
P
Q
QVQLKQSGTELVRPGTSVKMSCKAAGYTFTDYWIGWVKQRPGHGLEWIGDFYPGGDYTLYSENFMGKASLTADTSSNTAYMQLSSLTSEDSAIYYCARGHYYGYSYAWFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKT
DIVLTQSPASLAVSLGQRATISCKASQSVDYDGDSYMNWYQQKPGQPPKLLIYAASNLESGIPARFSGSGSGTDFTLNIHPVGEEDAATYYCQQSHEDPWTFGGGTMLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLKQSGTELVRPGTSVKMSCKAAGYTFTDYWIGWVKQRPGHGLEWIGDFYPGGDYTLYSENFMGKASLTADTSSNTAYMQLSSLTSEDSAIYYCARGHYYGYSYAWFAYWGQGTLVTVSSA
DIVLTQSPASLAVSLGQRATISCKASQSVDYDGDSYMNWYQQKPGQPPKLLIYAASNLESGIPARFSGSGSGTDFTLNIHPVGEEDAATYYCQQSHEDPWTFGGGTMLEIKRT
13.314185
13.860668
228
218
104
113
123
113
24
cg10 fab heavy chain
cg10 fab light chain
mus musculus
mus musculus
C;F
protein;protein
envelope glycoprotein gp160;t-cell surface glycoprotein cd4
human immunodeficiency virus;homo sapiens
40;12
14;7
0.82;1.0
HL
train
7y0g_B_A
7y0g
crystal structure of anti-mpeg h15-2b fab
no
immune system
2022-06-05
2022-08-10
x-ray diffraction
2.08
0.245
0.211
35936993
10.1038/s42004-022-00709-0
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
B
A
EVQLVESGGGLVQPGGSLKLSCAASGFTFSNYWMNWVRQASGKGLEWVGEIRSKSNNYATHYAESVKGRFTISRDDSKNTAYLQMNSLKTEDTAVYYCSNRYYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTGGSHHHHHH
DIQMTQSPSSLSASVGDRVTITCKASQDVNTAVAWYQQKPGKAPKLLIYWASTRHTGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCLQYINYPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLKLSCAASGFTFSNYWMNWVRQASGKGLEWVGEIRSKSNNYATHYAESVKGRFTISRDDSKNTAYLQMNSLKTEDTAVYYCSNRYYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
DIQMTQSPSSLSASVGDRVTITCKASQDVNTAVAWYQQKPGKAPKLLIYWASTRHTGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCLQYINYPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
20.921059
23.405315
229
214
211
213
216
213
91
15-2b heavy chain
15-2b light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7y0g_E_D
7y0g
crystal structure of anti-mpeg h15-2b fab
no
immune system
2022-06-05
2022-08-10
x-ray diffraction
2.08
0.245
0.211
35936993
10.1038/s42004-022-00709-0
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
E
D
EVQLVESGGGLVQPGGSLKLSCAASGFTFSNYWMNWVRQASGKGLEWVGEIRSKSNNYATHYAESVKGRFTISRDDSKNTAYLQMNSLKTEDTAVYYCSNRYYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTGGSHHHHHH
DIQMTQSPSSLSASVGDRVTITCKASQDVNTAVAWYQQKPGKAPKLLIYWASTRHTGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCLQYINYPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLKLSCAASGFTFSNYWMNWVRQASGKGLEWVGEIRSKSNNYATHYAESVKGRFTISRDDSKNTAYLQMNSLKTEDTAVYYCSNRYYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
DIQMTQSPSSLSASVGDRVTITCKASQDVNTAVAWYQQKPGKAPKLLIYWASTRHTGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCLQYINYPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
20.524523
23.224773
229
214
207
211
214
211
93
15-2b heavy chain
15-2b light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7y0g_H_G
7y0g
crystal structure of anti-mpeg h15-2b fab
no
immune system
2022-06-05
2022-08-10
x-ray diffraction
2.08
0.245
0.211
35936993
10.1038/s42004-022-00709-0
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
G
EVQLVESGGGLVQPGGSLKLSCAASGFTFSNYWMNWVRQASGKGLEWVGEIRSKSNNYATHYAESVKGRFTISRDDSKNTAYLQMNSLKTEDTAVYYCSNRYYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTGGSHHHHHH
DIQMTQSPSSLSASVGDRVTITCKASQDVNTAVAWYQQKPGKAPKLLIYWASTRHTGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCLQYINYPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLKLSCAASGFTFSNYWMNWVRQASGKGLEWVGEIRSKSNNYATHYAESVKGRFTISRDDSKNTAYLQMNSLKTEDTAVYYCSNRYYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
DIQMTQSPSSLSASVGDRVTITCKASQDVNTAVAWYQQKPGKAPKLLIYWASTRHTGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCLQYINYPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
20.883556
23.419983
229
214
211
213
216
213
89
15-2b heavy chain
15-2b light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7y0g_K_J
7y0g
crystal structure of anti-mpeg h15-2b fab
no
immune system
2022-06-05
2022-08-10
x-ray diffraction
2.08
0.245
0.211
35936993
10.1038/s42004-022-00709-0
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
K
J
EVQLVESGGGLVQPGGSLKLSCAASGFTFSNYWMNWVRQASGKGLEWVGEIRSKSNNYATHYAESVKGRFTISRDDSKNTAYLQMNSLKTEDTAVYYCSNRYYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTGGSHHHHHH
DIQMTQSPSSLSASVGDRVTITCKASQDVNTAVAWYQQKPGKAPKLLIYWASTRHTGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCLQYINYPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLKLSCAASGFTFSNYWMNWVRQASGKGLEWVGEIRSKSNNYATHYAESVKGRFTISRDDSKNTAYLQMNSLKTEDTAVYYCSNRYYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
DIQMTQSPSSLSASVGDRVTITCKASQDVNTAVAWYQQKPGKAPKLLIYWASTRHTGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCLQYINYPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
20.525822
23.165178
229
214
206
211
214
211
89
15-2b heavy chain
15-2b light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7y0o_B
7y0o
interface of sars-cov-2 wt spike in complex with r15 fab and p14 nanobody
no
viral protein/immune system
2022-06-05
2023-09-06
electron microscopy
4.4
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
EEQLVESGGGLVQPGGSLRLSCAASGFRFGSYYMSWVRQAPGKAPEWVSDINTRGETTRYSDSVKGRFTIARDNANNTVFLFMNRLKPEDTAVYYCAVAASGDTFEGRSDPDYWGQGTLVTVS
N.A.
EEQLVESGGGLVQPGGSLRLSCAASGFRFGSYYMSWVRQAPGKAPEWVSDINTRGETTRYSDSVKGRFTIARDNANNTVFLFMNRLKPEDTAVYYCAVAASGDTFEGRSDPDYWGQGTLVTVS
N.A.
14.147536
0
123
0
123
0
123
0
0
p14 nanobody
N.A.
vicugna pacos
N.A.
A
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
49
13
0.57
H_only
train
7y0o_H_L
7y0o
interface of sars-cov-2 wt spike in complex with r15 fab and p14 nanobody
no
viral protein/immune system
2022-06-05
2023-09-06
electron microscopy
4.4
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV1
IGKV1
H
L
QMQLVQSGAEVKKPGASVKVSCKASGYTFTSYAISWVRQAPGQGLEWMGRIIPILGIANYAQKFQGRVTITADESTSTAYMELSSRSEDTAVYYCASGAFYYGSGSYPFDYWGQGT
GDIQLTQSPSSLSASVGDRVTITCRASQDISDYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISNLQPEDFATYYCQQSYSAPRTFGQGTKVEIK
QMQLVQSGAEVKKPGASVKVSCKASGYTFTSYAISWVRQAPGQGLEWMGRIIPILGIANYAQKFQGRVTITADESTSTAYMELSSRSEDTAVYYCASGAFYYGSGSYPFDYWGQGT
GDIQLTQSPSSLSASVGDRVTITCRASQDISDYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISNLQPEDFATYYCQQSYSAPRTFGQGTKVEIK
14.122262
13.485006
116
108
116
108
116
108
40
heavy chain of r15
light chain of r15
homo sapiens
homo sapiens
A
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
39
20
0.91
HL
train
7y0n_E_J
7y0n
sars-cov-2 wt spike in complex with r15 fab and p14 nanobody
yes
viral protein/immune system
2022-06-05
2023-09-13
electron microscopy
3.8
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV1
IGKV1
E
J
QMQLVQSGAEVKKPGASVKVSCKASGYTFTSYAISWVRQAPGQGLEWMGRIIPILGIANYAQKFQGRVTITADESTSTAYMELSSRSEDTAVYYCASGAFYYGSGSYPFDYWGQGT
GDIQLTQSPSSLSASVGDRVTITCRASQDISDYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISNLQPEDFATYYCQQSYSAPRTFGQGTKVEIK
QMQLVQSGAEVKKPGASVKVSCKASGYTFTSYAISWVRQAPGQGLEWMGRIIPILGIANYAQKFQGRVTITADESTSTAYMELSSRSEDTAVYYCASGAFYYGSGSYPFDYWGQGT
GDIQLTQSPSSLSASVGDRVTITCRASQDISDYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISNLQPEDFATYYCQQSYSAPRTFGQGTKVEIK
14.037362
13.18739
116
108
116
108
116
108
35
heavy chain of r15-f7
light chain of r15-f7
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
61
21
0.66
HL
train
7y0n_G
7y0n
sars-cov-2 wt spike in complex with r15 fab and p14 nanobody
yes
viral protein/immune system
2022-06-05
2023-09-13
electron microscopy
3.8
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VHH
IGHV3
N.A.
G
N.A.
EEQLVESGGGLVQPGGSLRLSCAASGFRFGSYYMSWVRQAPGKAPEWVSDINTRGETTRYSDSVKGRFTIARDNANNTVFLFMNRLKPEDTAVYYCAVAASGDTFEGRSDPDYWGQGTLVTVS
N.A.
EEQLVESGGGLVQPGGSLRLSCAASGFRFGSYYMSWVRQAPGKAPEWVSDINTRGETTRYSDSVKGRFTIARDNANNTVFLFMNRLKPEDTAVYYCAVAASGDTFEGRSDPDYWGQGTLVTVS
N.A.
14.252546
0
123
0
123
0
123
0
0
p14 nanobody
N.A.
vicugna pacos
N.A.
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
36
10
0.62
H_only
train
7y0n_C_L
7y0n
sars-cov-2 wt spike in complex with r15 fab and p14 nanobody
yes
viral protein/immune system
2022-06-05
2023-09-13
electron microscopy
3.8
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV1
IGKV1
C
L
QMQLVQSGAEVKKPGASVKVSCKASGYTFTSYAISWVRQAPGQGLEWMGRIIPILGIANYAQKFQGRVTITADESTSTAYMELSSRSEDTAVYYCASGAFYYGSGSYPFDYWGQGT
GDIQLTQSPSSLSASVGDRVTITCRASQDISDYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISNLQPEDFATYYCQQSYSAPRTFGQGTKVEIK
QMQLVQSGAEVKKPGASVKVSCKASGYTFTSYAISWVRQAPGQGLEWMGRIIPILGIANYAQKFQGRVTITADESTSTAYMELSSRSEDTAVYYCASGAFYYGSGSYPFDYWGQGT
GDIQLTQSPSSLSASVGDRVTITCRASQDISDYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISNLQPEDFATYYCQQSYSAPRTFGQGTKVEIK
14.018406
13.187704
116
108
116
108
116
108
38
heavy chain of r15-f7
light chain of r15-f7
homo sapiens
homo sapiens
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
58
21
0.72
HL
train
7y0n_H
7y0n
sars-cov-2 wt spike in complex with r15 fab and p14 nanobody
yes
viral protein/immune system
2022-06-05
2023-09-13
electron microscopy
3.8
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VHH
IGHV3
N.A.
H
N.A.
EEQLVESGGGLVQPGGSLRLSCAASGFRFGSYYMSWVRQAPGKAPEWVSDINTRGETTRYSDSVKGRFTIARDNANNTVFLFMNRLKPEDTAVYYCAVAASGDTFEGRSDPDYWGQGTLVTVS
N.A.
EEQLVESGGGLVQPGGSLRLSCAASGFRFGSYYMSWVRQAPGKAPEWVSDINTRGETTRYSDSVKGRFTIARDNANNTVFLFMNRLKPEDTAVYYCAVAASGDTFEGRSDPDYWGQGTLVTVS
N.A.
14.2472
0
123
0
123
0
123
0
0
p14 nanobody
N.A.
vicugna pacos
N.A.
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
35
10
0.67
H_only
train
7y0n_F_K
7y0n
sars-cov-2 wt spike in complex with r15 fab and p14 nanobody
yes
viral protein/immune system
2022-06-05
2023-09-13
electron microscopy
3.8
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV1
IGKV1
F
K
QMQLVQSGAEVKKPGASVKVSCKASGYTFTSYAISWVRQAPGQGLEWMGRIIPILGIANYAQKFQGRVTITADESTSTAYMELSSRSEDTAVYYCASGAFYYGSGSYPFDYWGQGT
GDIQLTQSPSSLSASVGDRVTITCRASQDISDYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISNLQPEDFATYYCQQSYSAPRTFGQGTKVEIK
QMQLVQSGAEVKKPGASVKVSCKASGYTFTSYAISWVRQAPGQGLEWMGRIIPILGIANYAQKFQGRVTITADESTSTAYMELSSRSEDTAVYYCASGAFYYGSGSYPFDYWGQGT
GDIQLTQSPSSLSASVGDRVTITCRASQDISDYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISNLQPEDFATYYCQQSYSAPRTFGQGTKVEIK
14.014545
13.195956
116
108
116
108
116
108
38
heavy chain of r15-f7
light chain of r15-f7
homo sapiens
homo sapiens
D
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
58
21
0.72
HL
train
7y0n_I
7y0n
sars-cov-2 wt spike in complex with r15 fab and p14 nanobody
yes
viral protein/immune system
2022-06-05
2023-09-13
electron microscopy
3.8
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VHH
IGHV3
N.A.
I
N.A.
EEQLVESGGGLVQPGGSLRLSCAASGFRFGSYYMSWVRQAPGKAPEWVSDINTRGETTRYSDSVKGRFTIARDNANNTVFLFMNRLKPEDTAVYYCAVAASGDTFEGRSDPDYWGQGTLVTVS
N.A.
EEQLVESGGGLVQPGGSLRLSCAASGFRFGSYYMSWVRQAPGKAPEWVSDINTRGETTRYSDSVKGRFTIARDNANNTVFLFMNRLKPEDTAVYYCAVAASGDTFEGRSDPDYWGQGTLVTVS
N.A.
14.253764
0
123
0
123
0
123
0
0
p14 nanobody
N.A.
vicugna pacos
N.A.
D
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
37
10
0.59
H_only
train
7y0v_H_L
7y0v
the co-crystal structure of ba.1-rbd with fab-5549
yes
viral protein/immune system
2022-06-06
2022-09-28
x-ray diffraction
2.48
0.268
0.211
36493787
10.1016/j.celrep.2022.111845
0
auth_asym_id
FabH:FabL
IGHV4
IGLV3
H
L
QLQLQESGPGLVKPSETLSLTCTVSGASITSSDSYWGWIRQPPGKGLEWIGSIYYTGSAYKSPPLKSRVTMSVDTSKNQFSLKVTSLTAADTAVYYCARGRGSPPHYYFYFGLDVWGQGTTVSVSLASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH
SYELTQPPSVSVSPGQTATITCSGTALPNHYAYWYQQKPGQAPVLVIYTDNERPSGIPERFSGSTSGTTVTLTISGVQAEDEADYYCQSADSNANVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
QLQLQESGPGLVKPSETLSLTCTVSGASITSSDSYWGWIRQPPGKGLEWIGSIYYTGSAYKSPPLKSRVTMSVDTSKNQFSLKVTSLTAADTAVYYCARGRGSPPHYYFYFGLDVWGQGTTVSVSLASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKK
YELTQPPSVSVSPGQTATITCSGTALPNHYAYWYQQKPGQAPVLVIYTDNERPSGIPERFSGSTSGTTVTLTISGVQAEDEADYYCQSADSNANVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTE
21.645756
23.85761
233
213
223
210
223
210
84
5549-fab
5549-fab
homo sapiens
homo sapiens
R
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
44
22
0.88
HL
train
7y0w_A_B
7y0w
local structure of bd55-5514 and bd55-5840 fab and omicron ba.1 rbd complex
yes
viral protein
2022-06-06
2022-09-28
electron microscopy
3.42
N.A.
N.A.
36493787
10.1016/j.celrep.2022.111845
0
auth_asym_id
VH:VL
IGHV1
IGKV1
A
B
QVQLVQSGAEVKKPGSSVKVSCKASGGTFRSHVISWVRQAPGQGLEWMGGFIPLFGTTIYAQAFQGRVMISADESTSTAYMELSSLRSEDTAVYFCARLFPNGDPNSPEDGFDIWGQGTLVTV
DIQMTQSPSSLSASVGDRVTITCQASQDIGNYLNWYQQKPGKAPKLLIYDASHLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQRYDDLPSYTFGQGTKVEI
QVQLVQSGAEVKKPGSSVKVSCKASGGTFRSHVISWVRQAPGQGLEWMGGFIPLFGTTIYAQAFQGRVMISADESTSTAYMELSSLRSEDTAVYFCARLFPNGDPNSPEDGFDIWGQGTLVTV
DIQMTQSPSSLSASVGDRVTITCQASQDIGNYLNWYQQKPGKAPKLLIYDASHLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQRYDDLPSYTFGQGTKVEI
14.174
13.155492
123
107
123
107
123
107
43
bd55-5514h
bd55-5514l
homo sapiens
homo sapiens
R
protein
spike protein s1
homo sapiens
49
20
0.8
HL
train
7y0w_H_L
7y0w
local structure of bd55-5514 and bd55-5840 fab and omicron ba.1 rbd complex
yes
viral protein
2022-06-06
2022-09-28
electron microscopy
3.42
N.A.
N.A.
36493787
10.1016/j.celrep.2022.111845
0
auth_asym_id
VH:VL
IGHV7
IGKV3
H
L
VQLAQSGSELRKPGASVKVSCDTSGHSFTSNAIHWVRQAPGQGLEWMGWINTDTGTPTYAQGFTGRFVFSLDTSARTAYLQISSLKADDTAVFYCARERDYSDYFFDYWGQGTLVTVSS
EVVMTQSPASLSVSPGERATLSCRARASLGISTDLAWYQQRPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDSAVYYCQQYSNWPLTFGGGTKVEIK
VQLAQSGSELRKPGASVKVSCDTSGHSFTSNAIHWVRQAPGQGLEWMGWINTDTGTPTYAQGFTGRFVFSLDTSARTAYLQISSLKADDTAVFYCARERDYSDYFFDYWGQGTLVTVSS
EVVMTQSPASLSVSPGERATLSCRARASLGISTDLAWYQQRPGQAPRLLIYGASTRATGIPARFSGSGSGTEFTLTISSLQSEDSAVYYCQQYSNWPLTFGGGTKVEIK
13.755217
13.253717
119
109
119
109
119
109
43
bd55-5840h
bd55-5840l
homo sapiens
homo sapiens
R
protein
spike protein s1
homo sapiens
44
20
0.83
HL
train
8d8r_H_L
8d8r
sars-cov-2 spike rbd in complex with dmab 2196
no
viral protein/immune system
2022-06-08
2022-10-19
electron microscopy
4.1
N.A.
N.A.
36202799
10.1038/s41467-022-33309-6
0
auth_asym_id
VH:VL
IGHV1
IGKV3
H
L
QMQLVQSGPEVKKPGTSVKVSCKASGFTFMSSAVQWVRQARGQRLEWIGWIVIGSGNTNYAQKFQERVTITRDMSTSTAYMELSSLRSEDTAVYYCAAPYCSSISCNDGFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQHYGSSRGWTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QMQLVQSGPEVKKPGTSVKVSCKASGFTFMSSAVQWVRQARGQRLEWIGWIVIGSGNTNYAQKFQERVTITRDMSTSTAYMELSSLRSEDTAVYYCAAPYCSSISCNDGFDIWGQGTMVTVS
EIVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQHYGSSRGWTFGQGTKVEIK
14.19317
13.474884
226
216
122
109
122
109
40
2196 heavy chain
2196 light chain
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
39
19
0.83
HL
train
7y1f_E
7y1f
cryo-em structure of human k-opioid receptor-gi complex
no
structural protein
2022-06-08
2023-05-24
electron microscopy
3.3
N.A.
N.A.
37285260
10.1093/procel/pwac033
0
auth_asym_id
scFv
N.A.
N.A.
E
N.A.
GSMLLVNQSHQGFNKEHTSKMVSAIVLYVLLAAAAHSAFADVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAHHHHHHHH
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.258108
0
299
0
232
0
246
0
0
scfv16
N.A.
homo sapiens
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
28;21
17;8
0.89;0.8
H_only
train
7y1b_H_L
7y1b
3.2 angstrom cryo-em structure of extracellular region of mouse basigin-2 in complex with the fab fragment of antibody 6e7f1
no
transport protein
2022-06-08
2023-06-14
electron microscopy
3.23
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV1
IGKV6
H
L
MGWSYIILFLVTTATGVHSQVQLQQPGAELVKPGASVNLSCKASGYTFTNYWIHWVKQRPGQGLEWIGMIHPNSGTINYNEKFKTKATLTVDKSSSTAYMQLSSLTSEDSAVYYCARVGTGSLDYWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR
MVSTSQLLGLLLFWTSASRCDIVMTQSPATLSVTPGDRVSLSCRASQSISDYLHWYQQKSHESPRLLIKYVSQSISGIPSRFSGSGSGSYFTLSIDSVEPEDVGVYYCQNGHRFPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
QVQLQQPGAELVKPGASVNLSCKASGYTFTNYWIHWVKQRPGQGLEWIGMIHPNSGTINYNEKFKTKATLTVDKSSSTAYMQLSSLTSEDSAVYYCARVGTGSLDYWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPR
DIVMTQSPATLSVTPGDRVSLSCRASQSISDYLHWYQQKSHESPRLLIKYVSQSISGIPSRFSGSGSGSYFTLSIDSVEPEDVGVYYCQNGHRFPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE
21.438633
23.74067
236
234
214
213
217
213
89
heavy chain of 6e7f1
light chain of 6e7f1
mus musculus
mus musculus
A
protein
isoform 2 of basigin
mus musculus
51
18
0.75
HL
train
7y24_S
7y24
cryo-em structure of the octreotide-bound sstr2-minigo-scfv16 complex
yes
structural protein
2022-06-09
2022-10-19
electron microscopy
3.25
N.A.
N.A.
36138141
10.1038/s41589-022-01130-3
0
auth_asym_id
scFv
N.A.
N.A.
S
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.43922
0
246
0
231
0
246
0
0
single fab chain (svfv16)
N.A.
homo sapiens
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(o) subunit alpha;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
29;20
17;9
0.89;0.9
H_only
train
7y26_D
7y26
cryo-em structure of the octreotide-bound sstr2-minigq-scfv16 complex
yes
structural protein
2022-06-09
2022-10-19
electron microscopy
3.3
N.A.
N.A.
36138141
10.1038/s41589-022-01130-3
0
auth_asym_id
scFv
N.A.
N.A.
D
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGSGGGGSGGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPERFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAHHHHHHHH
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGSGGGGSGGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPERFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLE
N.A.
17.816828
0
258
0
222
0
245
0
0
single fab chain (svfv16)
N.A.
homo sapiens
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;engineered guanine nucleotide-binding protein g(q) subunit alpha
homo sapiens;homo sapiens
17;27
8;15
0.89;0.94
H_only
train
7y3g_N
7y3g
cryo-em structure of a class a orphan gpcr
yes
membrane protein
2022-06-10
2023-06-07
electron microscopy
2.77
N.A.
N.A.
36593162
10.1016/j.scib.2022.12.023
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
MKYLLPTAAAGLLLLAAQPAMAMQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHH
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV
N.A.
13.950075
0
157
0
126
0
126
0
0
nanobody 35
N.A.
lama glama
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
41;32
15;11
0.68;0.69
H_only
train
8a44_C_D
8a44
plasmodium vivax duffy binding protein region ii bound the darc ectodomain and monoclonal antibody db1
yes
cell adhesion
2022-06-10
2023-06-07
x-ray diffraction
2.49
0.225
0.196
37336887
10.1038/s41467-023-39357-w
0
auth_asym_id
FabH:FabL
IGHV5
IGKV1
C
D
EVQLVQSGAEVKKPGESLKISCKGSGYSFTDYWIGWVRQMPGKGLEWMGIIYAGDSDTRYSPSFQGQVTISADKSISTASLQWSSLKASDTAMYYCARLAYDSSGYYYAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
IVMTQSPSSLSASVGDRVTITCRASQTISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPLITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
EVQLVQSGAEVKKPGESLKISCKGSGYSFTDYWIGWVRQMPGKGLEWMGIIYAGDSDTRYSPSFQGQVTISADKSISTASLQWSSLKASDTAMYYCARLAYDSSGYYYAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
IVMTQSPSSLSASVGDRVTITCRASQTISSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPLITFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
23.272562
23.467407
225
213
225
213
225
213
104
heavy chain of monoclonal antibody db1
light chain of monoclonal antibody db1
homo sapiens
homo sapiens
A
protein
duffy binding protein
plasmodium vivax
49
21
0.78
HL
train
7y36_N
7y36
cryo-em structure of the teriparatide-bound human pth1r-gs complex
yes
membrane protein
2022-06-10
2023-07-05
electron microscopy
2.8
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTV
N.A.
13.722148
0
126
0
126
0
126
0
0
nanobody 35
N.A.
synthetic construct
N.A.
A;B
protein;protein
isoform gnas-2 of guanine nucleotide-binding protein g(s) subunit alpha isoforms short;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;rattus norvegicus
47;30
13;11
0.57;0.69
H_only
train
7y3j_H_L
7y3j
24b3 antibody-peptide complex
no
immune system
2022-06-11
2022-08-17
x-ray diffraction
2.6
0.261
0.222
35839743
10.1016/j.bbrc.2022.07.010
0
auth_asym_id
FabH:FabL
IGHV1
IGKV2
H
L
EVQLQQSGPELVKPGASVKIFCKASGYTFTDYNMDWVKQSHGKRLEWIGDINPNTGVTIDNPKFKGKATLTVDESSSTVYMELRSLSSEDTAVYYCARLPDNYVMDYWGQGTSVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSQTVTCNVAHPASSTKVDKKIVPRD
DVVMTQTPLSLPVSLGDQASISCRCSQSLVHRNGNTNLHWYLQKSGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTYVPLTFGVGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN
EVQLQQSGPELVKPGASVKIFCKASGYTFTDYNMDWVKQSHGKRLEWIGDINPNTGVTIDNPKFKGKATLTVDESSSTVYMELRSLSSEDTAVYYCARLPDNYVMDYWGQGTSVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSQTVTCNVAHPASSTKVDKKIVPRD
DVVMTQTPLSLPVSLGDQASISCRCSQSLVHRNGNTNLHWYLQKSGQSPKLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYFCSQSTYVPLTFGVGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN
22.98199
22.846125
219
217
219
217
219
217
104
24b3 heavy chain
24b3 light chain
mus musculus
mus musculus
A
peptide
ala-leu-val-phe-phe-ala-pro-ala-val-gly-ser
homo sapiens
33
16
0.7
HL
train
7y3o_H_L
7y3o
crystal structure of sars-cov-2 receptor binding domain in complex with human antibody biols56
no
viral protein/immune system
2022-06-11
2023-12-27
x-ray diffraction
2.1
0.229
0.183
38109549
10.1073/pnas.2314193120
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
EVQLVESGGGVVQPGGSLRLSCAVSGFTFDDYAMHWVRQAPGKGLDWVSLISGDGSYTYYADSVKGRFTISRDSSKNSLYLQMNSLRTEDTALYYCAKAQTPTLWWLQDAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS
DIQMTQSPSSLSASVGDRVTITCRASQSISNYLNWYQQKPGKAPKLLIYVASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGVVQPGGSLRLSCAVSGFTFDDYAMHWVRQAPGKGLDWVSLISGDGSYTYYADSVKGRFTISRDSSKNSLYLQMNSLRTEDTALYYCAKAQTPTLWWLQDAFDIWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS
DIQMTQSPSSLSASVGDRVTITCRASQSISNYLNWYQQKPGKAPKLLIYVASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQSYSTPFTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
23.241568
22.404417
226
214
226
214
226
214
101
heavy chain of biols56
light chain of biols56
homo sapiens
homo sapiens
A
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
43
19
0.83
HL
train
8d9z_B_A
8d9z
crystal structure of cobra alpha-neurotoxin in complex with centi-lnx-d09 antibody
no
immune system,antitoxin/toxin
2022-06-12
2023-06-14
x-ray diffraction
1.8
0.198
0.165
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
B
A
EVQLVESGGGFVQPGGSLRLSCAASGFTFSNFDMHWVRQSPGKGLEWVSGLDHSGGAHYAGSVKGRFTISREDAKNSLDLQMNNLRVDDTAVYFCVRGTLYHYTSGSYYSDAFDIWGQGTLVTVSSASVKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTGLE
EIVLTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYAASSLESGVPSRFSGSGSGTDFTLTISSQQPEDFATYYCQQANSFPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGFVQPGGSLRLSCAASGFTFSNFDMHWVRQSPGKGLEWVSGLDHSGGAHYAGSVKGRFTISREDAKNSLDLQMNNLRVDDTAVYFCVRGTLYHYTSGSYYSDAFDIWGQGTLVTVSSASVKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
EIVLTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYAASSLESGVPSRFSGSGSGTDFTLTISSQQPEDFATYYCQQANSFPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
22.508966
23.016851
237
214
227
213
227
213
92
centi-lnx-d09 fab heavy chain
centi-lnx-d09 fab light chain
homo sapiens
homo sapiens
D
protein
long neurotoxin 1
naja nivea
38
19
0.86
HL
train
8da0_B_A
8da0
crystal structure of mamba alpha-neurotoxin in complex with centi-lnx-d09 antibody
no
immune system,antitoxin/toxin
2022-06-12
2023-06-14
x-ray diffraction
2.2
0.248
0.196
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
B
A
EVQLVESGGGFVQPGGSLRLSCAASGFTFSNFDMHWVRQSPGKGLEWVSGLDHSGGAHYAGSVKGRFTISREDAKNSLDLQMNNLRVDDTAVYFCVRGTLYHYTSGSYYSDAFDIWGQGTLVTVSSASVKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTGLE
EIVLTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYAASSLESGVPSRFSGSGSGTDFTLTISSQQPEDFATYYCQQANSFPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGFVQPGGSLRLSCAASGFTFSNFDMHWVRQSPGKGLEWVSGLDHSGGAHYAGSVKGRFTISREDAKNSLDLQMNNLRVDDTAVYFCVRGTLYHYTSGSYYSDAFDIWGQGTLVTVSSASVKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
EIVLTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYAASSLESGVPSRFSGSGSGTDFTLTISSQQPEDFATYYCQQANSFPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
24.428972
22.45644
237
214
234
214
234
214
119
centi-lnx-d09 fab heavy chain
centi-lnx-d09 fab light chain
homo sapiens
homo sapiens
E
protein
alpha-elapitoxin-dpp2d
dendroaspis polylepis polylepis
39
19
0.79
HL
train
8da0_D_C
8da0
crystal structure of mamba alpha-neurotoxin in complex with centi-lnx-d09 antibody
no
immune system,antitoxin/toxin
2022-06-12
2023-06-14
x-ray diffraction
2.2
0.248
0.196
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
D
C
EVQLVESGGGFVQPGGSLRLSCAASGFTFSNFDMHWVRQSPGKGLEWVSGLDHSGGAHYAGSVKGRFTISREDAKNSLDLQMNNLRVDDTAVYFCVRGTLYHYTSGSYYSDAFDIWGQGTLVTVSSASVKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHTGLE
EIVLTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYAASSLESGVPSRFSGSGSGTDFTLTISSQQPEDFATYYCQQANSFPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGFVQPGGSLRLSCAASGFTFSNFDMHWVRQSPGKGLEWVSGLDHSGGAHYAGSVKGRFTISREDAKNSLDLQMNNLRVDDTAVYFCVRGTLYHYTSGSYYSDAFDIWGQGTLVTVSSASVKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTHT
EIVLTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYAASSLESGVPSRFSGSGSGTDFTLTISSQQPEDFATYYCQQANSFPYTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
24.414953
22.434887
237
214
234
214
234
214
117
centi-lnx-d09 fab heavy chain
centi-lnx-d09 fab light chain
homo sapiens
homo sapiens
F
peptide
alpha-elapitoxin-dpp2d
dendroaspis polylepis polylepis
24
13
0.93
HL
train
8dao_C_D
8dao
crystal structure of sars-cov-2 spike stem fusion peptide in complex with neutralizing antibody cov44-79
no
immune system
2022-06-13
2022-07-27
x-ray diffraction
2.8
0.284
0.231
35857439
10.1126/science.abq3773
0
auth_asym_id
VH:VL
IGHV3
IGKV1
C
D
QVQLVESGGGVVQPGRSLRLSCAASGLTFSGYAMHWVRQAPGKGLEWVAVISRDARNKYYADSVKGRFTISRDNSKKTVYLEMNSLRVEDTAVYYCAILIIPGITEPGSPDALDIWGQGTMVSVSS
DIQMTQSPSSMSASVGDRVTITCRASQDISKWLAWYQQRPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQASSFPWSITFGQGTRLEIR
QVQLVESGGGVVQPGRSLRLSCAASGLTFSGYAMHWVRQAPGKGLEWVAVISRDARNKYYADSVKGRFTISRDNSKKTVYLEMNSLRVEDTAVYYCAILIIPGITEPGSPDALDIWGQGTMVSVSS
DIQMTQSPSSMSASVGDRVTITCRASQDISKWLAWYQQRPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQASSFPWSITFGQGTRLEIR
14.623608
13.408505
126
109
126
109
126
109
53
cov44-79 heavy chain variable domain
cov44-79 light chain variable domain
homo sapiens
homo sapiens
I
peptide
spike protein s2 fusion peptide
severe acute respiratory syndrome coronavirus 2
35
23
0.96
HL
train
8dao_A_B
8dao
crystal structure of sars-cov-2 spike stem fusion peptide in complex with neutralizing antibody cov44-79
no
immune system
2022-06-13
2022-07-27
x-ray diffraction
2.8
0.284
0.231
35857439
10.1126/science.abq3773
0
auth_asym_id
VH:VL
IGHV3
IGKV1
A
B
QVQLVESGGGVVQPGRSLRLSCAASGLTFSGYAMHWVRQAPGKGLEWVAVISRDARNKYYADSVKGRFTISRDNSKKTVYLEMNSLRVEDTAVYYCAILIIPGITEPGSPDALDIWGQGTMVSVSS
DIQMTQSPSSMSASVGDRVTITCRASQDISKWLAWYQQRPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQASSFPWSITFGQGTRLEIR
QVQLVESGGGVVQPGRSLRLSCAASGLTFSGYAMHWVRQAPGKGLEWVAVISRDARNKYYADSVKGRFTISRDNSKKTVYLEMNSLRVEDTAVYYCAILIIPGITEPGSPDALDIWGQGTMVSVSS
DIQMTQSPSSMSASVGDRVTITCRASQDISKWLAWYQQRPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQASSFPWSITFGQGTRLEIR
14.635154
13.415292
126
109
126
109
126
109
57
cov44-79 heavy chain variable domain
cov44-79 light chain variable domain
homo sapiens
homo sapiens
J
peptide
spike protein s2 fusion peptide
severe acute respiratory syndrome coronavirus 2
31
21
0.95
HL
train
8dad_H_L
8dad
sars-cov-2 receptor binding domain in complex with az090 fab
yes
viral protein/immune system
2022-06-13
2022-08-24
electron microscopy
3.85
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV1
IGKV3
H
L
QVQLVQSGPEVKKPGTSVKVSCKASQFTFSISAVQWVRQARGQRLEWMGWIVVGSGNTDYAQRFQERVTISRDMSAGTVYMELRSLRSEDTAVYYCAAPYCNKTNCRDGFDMWGQGTMVTVSS
IVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASRRATGIPDRFSGSASGTDFILTISRLEPEDFAVYYCQQYRNSPWTFGQGTKVEIK
QVQLVQSGPEVKKPGTSVKVSCKASQFTFSISAVQWVRQARGQRLEWMGWIVVGSGNTDYAQRFQERVTISRDMSAGTVYMELRSLRSEDTAVYYCAAPYCNKTNCRDGFDMWGQGTMVTVSS
IVLTQSPGTLSLSPGERATLSCRASQSVSSSYLAWYQQKPGQAPRLLIYGASRRATGIPDRFSGSASGTDFILTISRLEPEDFAVYYCQQYRNSPWTFGQGTKVEIK
14.186516
13.238228
123
107
123
107
123
107
39
az090 fab heavy chain
az090 fab light chain
homo sapiens
homo sapiens
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
49
22
0.88
HL
train
8dam_B
8dam
nbf3:nbe8:cav beta subunit 1b complex
no
transport protein/immune system
2022-06-13
2022-12-21
x-ray diffraction
2
0.227
0.193
36494348
10.1038/s41467-022-35025-7
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
GQVQLQESGGGLVQAGGSLRLSCVASGRTFSSYAMGWFRQAPGKEREFVAAIDWSGGTASHADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAASSYWSRSVDEYDYWGQGTQVTVSS
N.A.
QVQLQESGGGLVQAGGSLRLSCVASGRTFSSYAMGWFRQAPGKEREFVAAIDWSGGTASHADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAASSYWSRSVDEYDYWGQGTQVTVSS
N.A.
13.570343
0
123
0
120
0
122
0
0
nanobody f3
N.A.
lama glama
N.A.
A
protein
voltage-dependent l-type calcium channel subunit beta-1
mus musculus
50
14
0.64
H_only
train
8dam_C
8dam
nbf3:nbe8:cav beta subunit 1b complex
no
transport protein/immune system
2022-06-13
2022-12-21
x-ray diffraction
2
0.227
0.193
36494348
10.1038/s41467-022-35025-7
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
GQVQLQESGGGSVQAGGSLRLSCAASGRTFSKNAMGWFRQAPGKEREFVVAISWSGRNTYYADSVKGRFTISRDNAKNTVDLQMNSLKPEDSAVYYCAVGGDWRVYDISFYYTAHQYEYWGQGTQVTVSS
N.A.
GQVQLQESGGGSVQAGGSLRLSCAASGRTFSKNAMGWFRQAPGKEREFVVAISWSGRNTYYADSVKGRFTISRDNAKNTVDLQMNSLKPEDSAVYYCAVGGDWRVYDISFYYTAHQYEYWGQGTQVTV
N.A.
13.870285
0
130
0
128
0
128
0
0
nanobody e8
N.A.
lama glama
N.A.
A
protein
voltage-dependent l-type calcium channel subunit beta-1
mus musculus
44
16
0.89
H_only
train
8dbz_B_C
8dbz
cryoem structure of hantavirus andv gn(h) protein complex with 2fabs andv-5 and andv-34
no
viral protein/immune system
2022-06-15
2023-04-05
electron microscopy
4.1
N.A.
N.A.
36971354
10.7554/eLife.81743
0
auth_asym_id
VH:VL
IGHV1
IGKV2
B
C
QVQLLQSGAEVKKPGSSVRVSCQSSGDIYNYYGISWVRQAPGQGLEWMGGIIPVYGRPNYVQKFRGRVTFTVDKSTSTAYMELSTLRADDTAVYYCARDTARSHYFGSGNDYGMDVWGQGTTVIVSS
DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGFNFVDWYLQKPGQSPQLLIYLGSTRASGVPDRFSGSGSGTDFTLEISRVEAEDVGVYYCMQALQFPRTFGQGTKLDIK
QVQLLQSGAEVKKPGSSVRVSCQSSGDIYNYYGISWVRQAPGQGLEWMGGIIPVYGRPNYVQKFRGRVTFTVDKSTSTAYMELSTLRADDTAVYYCARDTARSHYFGSGNDYGMDVWGQGTTVIVSS
DIVMTQSPLSLPVTPGEPASISCRSSQSLLHSNGFNFVDWYLQKPGQSPQLLIYLGSTRASGVPDRFSGSGSGTDFTLEISRVEAEDVGVYYCMQALQFPRTFGQGTKLDIK
14.250969
13.694123
127
112
127
112
127
112
48
fv (h) andv-5
fv (l) andv-5
homo sapiens
homo sapiens
A;G
protein;protein
glycoprotein n;fab fc (l) kappac
andes orthohantavirus;homo sapiens
38;17
14;5
0.82;0.62
HL
train
8dbz_D_E
8dbz
cryoem structure of hantavirus andv gn(h) protein complex with 2fabs andv-5 and andv-34
no
viral protein/immune system
2022-06-15
2023-04-05
electron microscopy
4.1
N.A.
N.A.
36971354
10.7554/eLife.81743
0
auth_asym_id
VH:VL
IGHV1
IGKV3
D
E
QVHLVQSGGELRKPGSSVKVSCKASGGTFSSFAITWLRQAPGQGLEWVGAYIPVFGSAIHGQKVHGRVTLTADESTTTAYMELSSLRSEDTAVYFCARGPTQNWEYSYYTYFESWGQGTLVTVSS
QIVLTQSPGTLSLSPGERATLSCRASQSVTSRYLAWYQQKPGQAPRLLIYDTSSRATGIPDRFSGSGSETDFTLTISRLAPEDFAVYYCQQYGTSPAVTFGQGTRLEIK
QVHLVQSGGELRKPGSSVKVSCKASGGTFSSFAITWLRQAPGQGLEWVGAYIPVFGSAIHGQKVHGRVTLTADESTTTAYMELSSLRSEDTAVYFCARGPTQNWEYSYYTYFESWGQGTLVTVSS
QIVLTQSPGTLSLSPGERATLSCRASQSVTSRYLAWYQQKPGQAPRLLIYDTSSRATGIPDRFSGSGSETDFTLTISRLAPEDFAVYYCQQYGTSPAVTFGQGTRLEIK
13.863628
13.34049
125
109
125
109
125
109
39
fv (h) andv-34
fv (l) andv-34
homo sapiens
homo sapiens
A;I
protein;protein
glycoprotein n;fab fc (l) kappac
andes orthohantavirus;homo sapiens
54;19
19;5
0.73;0.56
HL
train
8dce_H
8dce
sars-cov-2 receptor-binding domain speedesign immunogen 1 bound to c144 scfv
yes
viral protein/immune system
2022-06-16
2022-06-29
x-ray diffraction
2
0.203
0.177
36103542
10.1126/sciadv.abq8276
0
auth_asym_id
scFv
N.A.
N.A.
H
N.A.
ETEVQLVESGGGLIQPGGSLRLSCAASGFTVSNNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDKSKNTLYLQMNRLRAEDTAVYYCAREGEVEGYNDFWSGYSRDRYYFDYWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSGGGGSQSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTRVFGTGTKVTVLGTHHHHHH
N.A.
EVQLVESGGGLIQPGGSLRLSCAASGFTVSNNYMSWVRQAPGKGLEWVSVIYSGGSTYYADSVKGRFTISRDKSKNTLYLQMNRLRAEDTAVYYCAREGEVEGYNDFWSGYSRDRYYFDYWGQGTLVTVSSGGGGSGGGGSGGGGSGGGGSGGGGSQSALTQPASVSGSPGQSITISCTGTSSDVGGYNYVSWYQQHPGKAPKLMIYDVSNRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSSSTRVFGTGTKVTVLGT
N.A.
17.490686
0
276
0
242
0
268
0
0
c144 scfv
N.A.
homo sapiens
N.A.
A
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
44
20
0.83
H_only
train
8a67_D
8a67
branched lys48- and lys63-linked tri-ubiquitin (k48-k63-ub3) in complex with matured synthetic nanobody nbsl3.3q (3rd generation)
yes
signaling protein
2022-06-16
2023-02-15
x-ray diffraction
1.86
0.245
0.186
38977901
10.1038/s41594-024-01354-y
0
auth_asym_id
VHH
IGHV3
N.A.
D
N.A.
MKYLLPTAAAGLLLLAAQPAMAQVQLQESGGGLVQAGGSLRLSCAASGSIFDLGVMGWYRQAPGKEREQVAGIDYGGVTNYADSVKGRFTISRDNDTVYLQMNSLKPEDTAVYYCAAGIVGDEVGWIYYLYWGQGTQVTVSSHHHHHH
N.A.
VQLQESGGGLVQAGGSLRLSCAASGSIFDLGVMGWYRQAPGKEREQVAGIDYGGVTNYADSVKGRFTISRDNDTVYLQMNSLKPEDTAVYYCAAGIVGDEVGWIYYLYWGQGTQVTVSSHHHHHH
N.A.
15.357194
0
148
0
125
0
125
0
0
synthetic nanobody nbsl3.3q
N.A.
synthetic construct
N.A.
A;B;C
protein;protein;protein
polyubiquitin-b;polyubiquitin-b;polyubiquitin-b
homo sapiens;homo sapiens;homo sapiens
28;28;40
13;15;10
0.87;0.94;0.59
H_only
train
8a67_H
8a67
branched lys48- and lys63-linked tri-ubiquitin (k48-k63-ub3) in complex with matured synthetic nanobody nbsl3.3q (3rd generation)
yes
signaling protein
2022-06-16
2023-02-15
x-ray diffraction
1.86
0.245
0.186
38977901
10.1038/s41594-024-01354-y
0
auth_asym_id
VHH
IGHV3
N.A.
H
N.A.
MKYLLPTAAAGLLLLAAQPAMAQVQLQESGGGLVQAGGSLRLSCAASGSIFDLGVMGWYRQAPGKEREQVAGIDYGGVTNYADSVKGRFTISRDNDTVYLQMNSLKPEDTAVYYCAAGIVGDEVGWIYYLYWGQGTQVTVSSHHHHHH
N.A.
VQLQESGGGLVQAGGSLRLSCAASGSIFDLGVMGWYRQAPGKEREQVAGIDYGGVTNYADSVKGRFTISRDNDTVYLQMNSLKPEDTAVYYCAAGIVGDEVGWIYYLYWGQGTQVTVSSHHHHHH
N.A.
15.329328
0
148
0
125
0
125
0
0
synthetic nanobody nbsl3.3q
N.A.
synthetic construct
N.A.
E;F;G
protein;protein;protein
polyubiquitin-b;polyubiquitin-b;polyubiquitin-b
homo sapiens;homo sapiens;homo sapiens
27;31;39
14;16;10
0.93;0.84;0.59
H_only
train
8dcn_A_B
8dcn
crystal structure of clostridioides difficile binary toxin cdtb d4 fragment in complex with bintoxb/9 fab
no
toxin/immune system
2022-06-16
2023-04-05
x-ray diffraction
2.6
0.26
0.227
36951574
10.1128/jb.00456-22
0
auth_asym_id
FabH:FabL
IGHV1
IGKV4
A
B
QVQLQQSGAELARPGASVKMSCKASGYTFTSYTMHWVKQRPGQGLEWIGYINPSNDYTSYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYCARCWGYDPYYFDYWGQGTTLTVSSASTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGKGLEVLFQ
DIVMSQSPSLLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKVLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYNLLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
QVQLQQSGAELARPGASVKMSCKASGYTFTSYTMHWVKQRPGQGLEWIGYINPSNDYTSYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYCARCWGYDPYYFDYWGQGTTLTVSSASTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR
DIVMSQSPSLLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKVLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYNLLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE
22.770294
23.394966
231
219
214
218
220
218
95
bintoxb/9 fab heavy chain
bintoxb/9 fab light chain
mus musculus
mus musculus
C
protein
adp-ribosylating binary toxin binding subunit cdtb
clostridioides difficile
36
17
0.94
HL
train
8dcn_D_E
8dcn
crystal structure of clostridioides difficile binary toxin cdtb d4 fragment in complex with bintoxb/9 fab
no
toxin/immune system
2022-06-16
2023-04-05
x-ray diffraction
2.6
0.26
0.227
36951574
10.1128/jb.00456-22
0
auth_asym_id
FabH:FabL
IGHV1
IGKV4
D
E
QVQLQQSGAELARPGASVKMSCKASGYTFTSYTMHWVKQRPGQGLEWIGYINPSNDYTSYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYCARCWGYDPYYFDYWGQGTTLTVSSASTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPRDCGKGLEVLFQ
DIVMSQSPSLLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKVLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYNLLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
QVQLQQSGAELARPGASVKMSCKASGYTFTSYTMHWVKQRPGQGLEWIGYINPSNDYTSYNQKFKDKATLTADKSSSTAYMQLSSLTSEDSAVYYCARCWGYDPYYFDYWGQGTTLTVSSASTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETVTCNVAHPASSTKVDKKIVPR
DIVMSQSPSLLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSPKVLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYNLLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE
22.708445
23.5157
231
219
214
218
220
218
98
bintoxb/9 fab heavy chain
bintoxb/9 fab light chain
mus musculus
mus musculus
F
protein
adp-ribosylating binary toxin binding subunit cdtb
clostridioides difficile
31
15
0.94
HL
train
7y58_B
7y58
cryoem structure of qaca (d411n), an antibacterial efflux transporter from staphylococcus aureus
yes
membrane protein/immune system
2022-06-16
2023-07-12
electron microscopy
3.8
N.A.
N.A.
37458117
10.15252/embj.2023113418
0
auth_asym_id
VHH
IGHV3
N.A.
B
N.A.
MQVQLQESGGGSVQTGGSLRLSCAASGYRYSDNCVGWFRQAPGREREAVATYNSGSSTWYADSVKGRFTISQDSAKSTVYLQMNNLKPEDTAMYYCAGRNRLGSYCYMTGDFAYWGQGTQVTVSS
N.A.
MQVQLQESGGGSVQTGGSLRLSCAASGYRYSDNCVGWFRQAPGREREAVATYNSGSSTWYADSVKGRFTISQDSAKSTVYLQMNNLKPEDTAMYYCAGRNRLGSYCYMTGDFAYWGQGTQVTV
N.A.
13.820968
0
125
0
118
0
123
0
0
single-domain indian camelid antibody (a4)
N.A.
camelus dromedarius
N.A.
A
protein
antiseptic resistance protein
staphylococcus aureus
43
19
0.95
H_only
train
7y58_C
7y58
cryoem structure of qaca (d411n), an antibacterial efflux transporter from staphylococcus aureus
yes
membrane protein/immune system
2022-06-16
2023-07-12
electron microscopy
3.8
N.A.
N.A.
37458117
10.15252/embj.2023113418
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
MQVQLQESGGGSVQAGGSLRLSCAASGYTNSRKCMGWFRQIPGKEREGVAAIYGFGRGLILYADSVKGRFTISQDNAKNTVYLQMNSLKPEDTAMYYCAADSPGSCLSRSGYNYWGQGTQVTVSS
N.A.
VQLQESGGGSVQAGGSLRLSCAASGYTNSRKCMGWFRQIPGKEREGVAAIYGFGRGLILYADSVKGRFTISQDNAKNTVYLQMNSLKPEDTAMYYCAADSPGSCLSRSGYNYWGQGTQVTVS
N.A.
13.322463
0
125
0
115
0
122
0
0
single-domain indian camelid antibody(b7)
N.A.
camelus dromedarius
N.A.
A
protein
antiseptic resistance protein
staphylococcus aureus
22
8
0.73
H_only
train
8dcr_N
8dcr
cryo-em structure of dobutamine-bound beta1-adrenergic receptor in complex with heterotrimeric gs-protein
yes
signaling protein
2022-06-17
2022-07-27
electron microscopy
2.6
N.A.
N.A.
35835792
10.1038/s41467-022-31823-1
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
AAQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA
N.A.
AAQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS
N.A.
13.948423
0
140
0
130
0
130
0
0
nanobody 35
N.A.
lama glama
N.A.
B;A
protein;protein
guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(s) subunit alpha isoforms short
bos taurus;bos taurus
31;52
10;13
0.67;0.5
H_only
train
8dcs_N
8dcs
cryo-em structure of cyanopindolol-bound beta1-adrenergic receptor in complex with heterotrimeric gs-protein
yes
signaling protein
2022-06-17
2022-07-27
electron microscopy
2.5
N.A.
N.A.
35835792
10.1038/s41467-022-31823-1
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
AAQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSHHHHHHEPEA
N.A.
AAQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS
N.A.
13.967217
0
140
0
130
0
130
0
0
nanobody 35
N.A.
lama glama
N.A.
B;A
protein;protein
guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1;guanine nucleotide-binding protein g(s) subunit alpha isoforms short
bos taurus;bos taurus
31;50
11;11
0.69;0.48
H_only
train
8dd2_J_I
8dd2
human gabaa receptor alpha1-beta2-gamma2 subtype in complex with gaba plus zolpidem
no
membrane protein/immune system
2022-06-17
2022-08-17
electron microscopy
2.9
N.A.
N.A.
35933426
10.1038/s41467-022-32212-4
0
auth_asym_id
VH:VL
IGHV1
IGKV3
J
I
EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMYWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITTDTFSNTAYLQLSSLTSEDTAVYYCARKGLRWAMDYWGQGTSVTVSTAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLEPSGPISTINPCPPCKECHKCPAPNLEGGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDW...
NIVMTQSPKSMSMSVGERVTLSCKASEYVGTYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFTGSGSATDFTLTIGSVQAEDLADYHCGQSYSYPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
VQLQQSGAELVKPGASVKLSCTASGFNIKDTYMYWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITTDTFSNTAYLQLSSLTSEDTAVYYCARKGLRWAMDYWGQGTSVTVS
NIVMTQSPKSMSMSVGERVTLSCKASEYVGTYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFTGSGSATDFTLTIGSVQAEDLADYHCGQSYSYPTFGAGTKLEL
13.576077
13.121418
454
213
116
105
116
105
46
igg2b fab heavy chain
kappa fab light chain
mus musculus
mus musculus
B
protein
gamma-aminobutyric acid receptor subunit alpha-1
homo sapiens
42
16
0.8
HL
train
8dd2_K_L
8dd2
human gabaa receptor alpha1-beta2-gamma2 subtype in complex with gaba plus zolpidem
no
membrane protein/immune system
2022-06-17
2022-08-17
electron microscopy
2.9
N.A.
N.A.
35933426
10.1038/s41467-022-32212-4
0
auth_asym_id
VH:VL
IGHV1
IGKV3
K
L
EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMYWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITTDTFSNTAYLQLSSLTSEDTAVYYCARKGLRWAMDYWGQGTSVTVSTAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLEPSGPISTINPCPPCKECHKCPAPNLEGGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDW...
NIVMTQSPKSMSMSVGERVTLSCKASEYVGTYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFTGSGSATDFTLTIGSVQAEDLADYHCGQSYSYPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
VQLQQSGAELVKPGASVKLSCTASGFNIKDTYMYWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITTDTFSNTAYLQLSSLTSEDTAVYYCARKGLRWAMDYWGQGTSVTVST
NIVMTQSPKSMSMSVGERVTLSCKASEYVGTYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFTGSGSATDFTLTIGSVQAEDLADYHCGQSYSYPTFGAGTKLELK
13.654894
13.227033
454
213
117
106
117
106
42
igg2b fab heavy chain
kappa fab light chain
mus musculus
mus musculus
D
protein
gamma-aminobutyric acid receptor subunit alpha-1
homo sapiens
45
20
0.83
HL
train
8dd3_J_I
8dd3
human gabaa receptor alpha1-beta2-gamma2 subtype in complex with gaba plus dmcm
no
membrane protein/immune system
2022-06-17
2022-08-17
electron microscopy
2.9
N.A.
N.A.
35933426
10.1038/s41467-022-32212-4
0
auth_asym_id
VH:VL
IGHV1
IGKV3
J
I
EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMYWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITTDTFSNTAYLQLSSLTSEDTAVYYCARKGLRWAMDYWGQGTSVTVSTAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLEPSGPISTINPCPPCKECHKCPAPNLEGGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDW...
NIVMTQSPKSMSMSVGERVTLSCKASEYVGTYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFTGSGSATDFTLTIGSVQAEDLADYHCGQSYSYPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
VQLQQSGAELVKPGASVKLSCTASGFNIKDTYMYWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITTDTFSNTAYLQLSSLTSEDTAVYYCARKGLRWAMDYWGQGTSVTVS
NIVMTQSPKSMSMSVGERVTLSCKASEYVGTYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFTGSGSATDFTLTIGSVQAEDLADYHCGQSYSYPTFGAGTKLEL
13.724676
13.208084
454
213
116
105
116
105
43
igg2b fab heavy chain
kappa fab light chain
mus musculus
mus musculus
B
protein
gamma-aminobutyric acid receptor subunit alpha-1
homo sapiens
39
15
0.79
HL
train
8dd3_K_L
8dd3
human gabaa receptor alpha1-beta2-gamma2 subtype in complex with gaba plus dmcm
no
membrane protein/immune system
2022-06-17
2022-08-17
electron microscopy
2.9
N.A.
N.A.
35933426
10.1038/s41467-022-32212-4
0
auth_asym_id
VH:VL
IGHV1
IGKV3
K
L
EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYMYWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITTDTFSNTAYLQLSSLTSEDTAVYYCARKGLRWAMDYWGQGTSVTVSTAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKLEPSGPISTINPCPPCKECHKCPAPNLEGGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDW...
NIVMTQSPKSMSMSVGERVTLSCKASEYVGTYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFTGSGSATDFTLTIGSVQAEDLADYHCGQSYSYPTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
VQLQQSGAELVKPGASVKLSCTASGFNIKDTYMYWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITTDTFSNTAYLQLSSLTSEDTAVYYCARKGLRWAMDYWGQGTSVTVST
NIVMTQSPKSMSMSVGERVTLSCKASEYVGTYVSWYQQKPEQSPKLLIYGASNRYTGVPDRFTGSGSATDFTLTIGSVQAEDLADYHCGQSYSYPTFGAGTKLELK
13.870254
13.354876
454
213
117
106
117
106
45
igg2b fab heavy chain
kappa fab light chain
mus musculus
mus musculus
D
protein
gamma-aminobutyric acid receptor subunit alpha-1
homo sapiens
39
16
0.84
HL
train
8dcy_A_B
8dcy
cchfv gp38 hoti/kosovo bound with 13g8 fab
no
viral protein
2022-06-17
2022-12-07
x-ray diffraction
3.62
0.299
0.281
36435827
10.1038/s41467-022-34923-0
0
auth_asym_id
FabH:FabL
IGHV4
IGKV1
A
B
DVQLQQSGPGLVAPSQSLSITCTVSGFSLTNYGIHWVRQPPGKGLEWLGVIWAGGYTKYNSALMSRLSMSKDNSKSQVFLKMNSLQTDDTAMYYCARDEVRRDYYAMDHWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGSHHHHHHHH
DIQMTQSPAILSASPGEKVTMTCWASSGVSYMHWYQQKPGSSPKPWIFATSNLASGVPARFSGSGSGTSYSLTISRVEAEDAATYYCQQWSFNPLTFGAGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQLQQSGPGLVAPSQSLSITCTVSGFSLTNYGIHWVRQPPGKGLEWLGVIWAGGYTKYNSALMSRLSMSKDNSKSQVFLKMNSLQTDDTAMYYCARDEVRRDYYAMDHWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVE
DIQMTQSPAILSASPGEKVTMTCWASSGVSYMHWYQQKPGSSPKPWIFATSNLASGVPARFSGSGSGTSYSLTISRVEAEDAATYYCQQWSFNPLTFGAGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
21.173111
22.898773
233
213
202
208
218
210
95
13g8 heavy chain
13g8 light chain
mus musculus
mus musculus
C
protein
envelopment polyprotein
crimean-congo hemorrhagic fever orthonairovirus
30
14
0.93
HL
train
8ddk_A_B
8ddk
cchfv gp38 hoti/kosovo bound with cc5_17
no
viral protein
2022-06-18
2022-12-14
x-ray diffraction
3.86
0.335
0.304
36435827
10.1038/s41467-022-34923-0
0
auth_asym_id
FabH:FabL
IGHV5
IGKV1
A
B
EVQLVQSGAEVKKPGESLRISCKGSGYSFTSYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLQWTSLKASDTAMYYCARQLGGSSFGNYYDSGSYYTAAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCGSHHHHHHHH
DIQMTQSPSSLSASVGDRVTITCRASQSINNYLNWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFASYYCQQSYRGTFGQGTKVEFKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVQSGAEVKKPGESLRISCKGSGYSFTSYWIGWVRQMPGKGLEWMGIIYPGDSDTRYSPSFQGQVTISADKSISTAYLQWTSLKASDTAMYYCARQLGGSSFGNYYDSGSYYTAAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDK
IQMTQSPSSLSASVGDRVTITCRASQSINNYLNWYQQKPGKAPKLLIYAASTLQSGVPSRFSGSGSGTDFTLTISSLQPEDFASYYCQQSYRGTFGQGTKVEFKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSS
21.48706
21.524874
243
212
188
141
226
200
45
heavy chain cc5-17
light chain cc5_17
homo sapiens
homo sapiens
C
protein
envelopment polyprotein
crimean-congo hemorrhagic fever orthonairovirus
31
8
0.5
HL
train
7y64_S
7y64
cryo-em structure of c5a-bound c5ar1 in complex with gi protein
no
membrane protein
2022-06-18
2023-03-01
electron microscopy
2.9
N.A.
N.A.
36806352
10.1038/s41422-023-00779-2
0
auth_asym_id
scFv
N.A.
N.A.
S
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAENLYFQGHHHHHHHH
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.826454
0
266
0
231
0
246
0
0
scfv16
N.A.
mus musculus
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
28;22
17;9
1.0;0.82
H_only
train
7y65_S
7y65
cryo-em structure of c5a peptide-bound c5ar1 in complex with gi protein
no
membrane protein
2022-06-18
2023-03-01
electron microscopy
3.2
N.A.
N.A.
36806352
10.1038/s41422-023-00779-2
0
auth_asym_id
scFv
N.A.
N.A.
S
N.A.
MDVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAENLYFQGHHHHHHHH
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
16.871328
0
267
0
194
0
246
0
0
scfv16
N.A.
mus musculus
N.A.
A
protein
guanine nucleotide-binding protein g(i) subunit alpha-1
homo sapiens
38
10
0.38
H_only
train
7y66_S
7y66
cryo-em structure of bm213-bound c5ar1 in complex with gi protein
no
membrane protein
2022-06-18
2023-03-01
electron microscopy
2.9
N.A.
N.A.
36806352
10.1038/s41422-023-00779-2
0
auth_asym_id
scFv
N.A.
N.A.
S
N.A.
MDVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAENLYFQGHHHHHHHH
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.810057
0
267
0
231
0
246
0
0
scfv16
N.A.
mus musculus
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
33;20
20;9
0.95;0.9
H_only
train
8de4_B_C
8de4
native serotonin transporter in complex with 15b8 fab in the presence of methamphetamine
no
membrane protein
2022-06-19
2023-07-05
electron microscopy
2.9
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV1
IGKV7
B
C
QVQLQQSGPELVKLGASVRISCKASGYRFSYSWMNWVKQRPGKGLEWIGRIYPGDGDTKYSGKFKGKATLTADKSSSTVYMQLSSLTSEDSAVYFCARSAYGSEGFAMDYWGQGTSVT
DIVLTQSPASLAVSLGQRATISCRASESVDNYGISFLNWFQQKPGQPPKLLIYAASNQGSGVPARFSGSGSGTYFSLNIHPMEEDDTAVYFCQQTKGVSWTFGGGTKVEI
QVQLQQSGPELVKLGASVRISCKASGYRFSYSWMNWVKQRPGKGLEWIGRIYPGDGDTKYSGKFKGKATLTADKSSSTVYMQLSSLTSEDSAVYFCARSAYGSEGFAMDYWGQGTSVT
DIVLTQSPASLAVSLGQRATISCRASESVDNYGISFLNWFQQKPGQPPKLLIYAASNQGSGVPARFSGSGSGTYFSLNIHPMEEDDTAVYFCQQTKGVSWTFGGGTKVEI
13.665728
13.365172
118
110
118
110
118
110
49
15b8 fab heavy chain variable domain
15b8 fab light chain variable domain
mus musculus
mus musculus
A
protein
transporter
sus scrofa
35
14
0.88
HL
train
8de6_E_F
8de6
oligomeric c9 in complex with ae11 fab
no
immune system
2022-06-20
2023-01-25
electron microscopy
3.2
N.A.
N.A.
36639734
10.1038/s42003-023-04431-y
0
auth_asym_id
VH:VL
IGHV4
IGKV1
E
F
MAVLALLFCLVTFPSCILSQVQLKESGPGLVAPSQSLSITCTVSGFSLTVYGVNWIRQPPGKGLEWLGMIWGDGSTDYNSALKSRLSITKDNSKSQVFLKMNSLQTDDTARYYCARDRSYGGSSAWFGYWGQGTLVTVSA
MSSAQFLGLLLLCFQGTRCDIQMTQTTSSLSASLGDRVTISCRASHDISNYLNWYQQKPDGTLKLLIYYTSRLHSGVPSRFSGSGSGTDYSLTISNLEQEDVATYFCQQGNYLPYTFGGGTKLEIK
QVQLKESGPGLVAPSQSLSITCTVSGFSLTVYGVNWIRQPPGKGLEWLGMIWGDGSTDYNSALKSRLSITKDNSKSQVFLKMNSLQTDDTARYYCARDRSYGGSSAWFGYWGQGTLVTVSA
DIQMTQTTSSLSASLGDRVTISCRASHDISNYLNWYQQKPDGTLKLLIYYTSRLHSGVPSRFSGSGSGTDYSLTISNLEQEDVATYFCQQGNYLPYTFGGGTKLEIK
13.956247
13.566951
140
126
121
107
121
107
45
ae11 fab vh
ae11 fab vl
mus musculus
mus musculus
A;C
protein;protein
complement component c9;complement component c9
homo sapiens;homo sapiens
35;25
17;13
0.77;1.0
HL
train
8de6_B_I
8de6
oligomeric c9 in complex with ae11 fab
no
immune system
2022-06-20
2023-01-25
electron microscopy
3.2
N.A.
N.A.
36639734
10.1038/s42003-023-04431-y
0
auth_asym_id
VH:VL
IGHV4
IGKV1
B
I
MAVLALLFCLVTFPSCILSQVQLKESGPGLVAPSQSLSITCTVSGFSLTVYGVNWIRQPPGKGLEWLGMIWGDGSTDYNSALKSRLSITKDNSKSQVFLKMNSLQTDDTARYYCARDRSYGGSSAWFGYWGQGTLVTVSA
MSSAQFLGLLLLCFQGTRCDIQMTQTTSSLSASLGDRVTISCRASHDISNYLNWYQQKPDGTLKLLIYYTSRLHSGVPSRFSGSGSGTDYSLTISNLEQEDVATYFCQQGNYLPYTFGGGTKLEIK
QVQLKESGPGLVAPSQSLSITCTVSGFSLTVYGVNWIRQPPGKGLEWLGMIWGDGSTDYNSALKSRLSITKDNSKSQVFLKMNSLQTDDTARYYCARDRSYGGSSAWFGYWGQGTLVTVSA
DIQMTQTTSSLSASLGDRVTISCRASHDISNYLNWYQQKPDGTLKLLIYYTSRLHSGVPSRFSGSGSGTDYSLTISNLEQEDVATYFCQQGNYLPYTFGGGTKLEIK
13.9679
13.56626
140
126
121
107
121
107
45
ae11 fab vh
ae11 fab vl
mus musculus
mus musculus
A;G
protein;protein
complement component c9;complement component c9
homo sapiens;homo sapiens
25;36
12;15
0.92;0.79
HL
train
8ded_U_V
8ded
cryo-em structure of western equine encephalitis virus vlp in complex with skw19 fab
no
virus/immune system
2022-06-20
2023-07-05
electron microscopy
4.1
N.A.
N.A.
37295404
10.1016/j.cell.2023.05.019
0
auth_asym_id
VH:VL
IGHV3
IGKV2
U
V
EVQLVESGGGLAKPGGSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVSVISSHYSTYYADSVKGRFTISRDNSKNTVSLQVNSLRAEDTAVYYCAKVGRSGYCTASGCNALLFDWFDVWGPGVLVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGLEVLFQ
DVVMTQSPLSLPVTPGQPASISCRSSQSLVHSNGNTSLSWYQQKAGHPPRLLIYQVSNRYSGVPDRFSGTGAGTDFTLTISRVETEDVGVYYCGQGAHLPPAFGQGTKVEIKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLAKPGGSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVSVISSHYSTYYADSVKGRFTISRDNSKNTVSLQVNSLRAEDTAVYYCAKVGRSGYCTASGCNALLFDWFDVWGPGVLVTVSS
DVVMTQSPLSLPVTPGQPASISCRSSQSLVHSNGNTSLSWYQQKAGHPPRLLIYQVSNRYSGVPDRFSGTGAGTDFTLTISRVETEDVGVYYCGQGAHLPPAFGQGTKVEIK
14.553665
13.597745
241
219
130
112
130
112
40
skw19 fab heavy chain
skw19 fab light chain
homo sapiens
homo sapiens
F;G
protein;protein
spike glycoprotein e1;spike glycoprotein e2
western equine encephalitis virus;western equine encephalitis virus
10;32
5;13
1.0;0.81
HL
train
8ded_H_L
8ded
cryo-em structure of western equine encephalitis virus vlp in complex with skw19 fab
no
virus/immune system
2022-06-20
2023-07-05
electron microscopy
4.1
N.A.
N.A.
37295404
10.1016/j.cell.2023.05.019
0
auth_asym_id
VH:VL
IGHV3
IGKV2
H
L
EVQLVESGGGLAKPGGSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVSVISSHYSTYYADSVKGRFTISRDNSKNTVSLQVNSLRAEDTAVYYCAKVGRSGYCTASGCNALLFDWFDVWGPGVLVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGLEVLFQ
DVVMTQSPLSLPVTPGQPASISCRSSQSLVHSNGNTSLSWYQQKAGHPPRLLIYQVSNRYSGVPDRFSGTGAGTDFTLTISRVETEDVGVYYCGQGAHLPPAFGQGTKVEIKRTVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGALKTGNSQESVTEQDSKDNTYSLSSTLTLSSTEYQSHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLAKPGGSLRLSCAASGFTFSSYAMHWVRQAPGKGLEWVSVISSHYSTYYADSVKGRFTISRDNSKNTVSLQVNSLRAEDTAVYYCAKVGRSGYCTASGCNALLFDWFDVWGPGVLVTVSS
DVVMTQSPLSLPVTPGQPASISCRSSQSLVHSNGNTSLSWYQQKAGHPPRLLIYQVSNRYSGVPDRFSGTGAGTDFTLTISRVETEDVGVYYCGQGAHLPPAFGQGTKVEIK
14.544688
13.549742
241
219
130
112
130
112
38
skw19 fab heavy chain
skw19 fab light chain
homo sapiens
homo sapiens
K
protein
spike glycoprotein e2
western equine encephalitis virus
30
12
0.86
HL
train
8def_S_T
8def
cryo-em structure of western equine encephalitis virus vlp in complex with skw24 fab
no
virus/immune system
2022-06-20
2023-07-05
electron microscopy
4.2
N.A.
N.A.
37295404
10.1016/j.cell.2023.05.019
0
auth_asym_id
VH:VL
IGHV3
IGLV3
S
T
EVQLVESGGGLVQPGGSLRLSCVASGFTFSDYRMAWVRQATGKGLEWVSTISQPSGTNTYYLDPVKGRFTVSRDNAKNTLYLQMHSLRAEDTAVYYCARVVTESRPPAAWFDVWGPGVLVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGLEVLFQ
SYELTQPPSVSASPGQTARITCGGINIGSELVHWYQQKPPQAPVLVIYANGERPSGIPERFSGSNSGNTATLTISGVEAGDEADYYCQLWDISSDHNYIFGDGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVEVAWKADGSAVNAGVETTKPSKQSNNKYAASSYLSLTSDQWKSHKSYSCQVTHEGSTVEKTVAPAECS
EVQLVESGGGLVQPGGSLRLSCVASGFTFSDYRMAWVRQATGKGLEWVSTISQPSGTNTYYLDPVKGRFTVSRDNAKNTLYLQMHSLRAEDTAVYYCARVVTESRPPAAWFDVWGPGVLVTVSS
SYELTQPPSVSASPGQTARITCGGINIGSELVHWYQQKPPQAPVLVIYANGERPSGIPERFSGSNSGNTATLTISGVEAGDEADYYCQLWDISSDHNYIFGDGTRL
14.088625
13.313271
235
215
124
106
124
106
44
skw24 fab heavy chain
skw24 fab light chain
homo sapiens
homo sapiens
G
protein
spike glycoprotein e2
western equine encephalitis virus
50
25
0.86
HL
train
8def_U_V
8def
cryo-em structure of western equine encephalitis virus vlp in complex with skw24 fab
no
virus/immune system
2022-06-20
2023-07-05
electron microscopy
4.2
N.A.
N.A.
37295404
10.1016/j.cell.2023.05.019
0
auth_asym_id
VH:VL
IGHV3
IGLV3
U
V
EVQLVESGGGLVQPGGSLRLSCVASGFTFSDYRMAWVRQATGKGLEWVSTISQPSGTNTYYLDPVKGRFTVSRDNAKNTLYLQMHSLRAEDTAVYYCARVVTESRPPAAWFDVWGPGVLVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGGLEVLFQ
SYELTQPPSVSASPGQTARITCGGINIGSELVHWYQQKPPQAPVLVIYANGERPSGIPERFSGSNSGNTATLTISGVEAGDEADYYCQLWDISSDHNYIFGDGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVEVAWKADGSAVNAGVETTKPSKQSNNKYAASSYLSLTSDQWKSHKSYSCQVTHEGSTVEKTVAPAECS
EVQLVESGGGLVQPGGSLRLSCVASGFTFSDYRMAWVRQATGKGLEWVSTISQPSGTNTYYLDPVKGRFTVSRDNAKNTLYLQMHSLRAEDTAVYYCARVVTESRPPAAWFDVWGPGVLVTVSS
SYELTQPPSVSASPGQTARITCGGINIGSELVHWYQQKPPQAPVLVIYANGERPSGIPERFSGSNSGNTATLTISGVEAGDEADYYCQLWDISSDHNYIFGDGTRL
14.070924
13.27111
235
215
124
106
124
106
45
skw24 fab heavy chain
skw24 fab light chain
homo sapiens
homo sapiens
J;K
protein;protein
spike glycoprotein e1;spike glycoprotein e2
western equine encephalitis virus;western equine encephalitis virus
11;50
5;24
1.0;0.86
HL
train
7y6k_J_E
7y6k
cryo-em structure of sars-cov-2 receptor binding domain in complex with k202.b bispecific antibody
yes
viral protein/immune system
2022-06-20
2023-07-19
electron microscopy
3.34
N.A.
N.A.
36870394
10.1016/j.antiviral.2023.105576
0
auth_asym_id
FabH:VHVL+
IGHV3
N.A.
J
E
EVQLLESGGGLVQPGGSLRLSCAASGFTFSDYAMSWVRQAPGKGLEWVSWIYSGSGNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARFPIARTSNSQSSYDGMDVWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDKRVESKYGPPCPPCPAPEFLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSQEDPEVQFNWYVDGVEVHNAKTKPREEQFNSTYRVVSVLTVLHQDW...
EVQVLESGGGLVQPGGSLRLSCAASGFTFSSYDMSWVRQAPGKGLEWVSGISYSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDVNFVPLVTFDYWGQGTLVTVSSGGGGSGGGGSGGGGSQSVLTQPPSASGTPGQRVTLSCTGSSSNIGSNSVTWYQQLPGTAPKLLIYDDNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCGTWDYSLSAYVFGGGTKLTVLGGGGSGGGGSGGGGSQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNAVSWYQQLPGTAPKLLIYADNKRPSGV...
VQLLESGGGLVQPGGSLRLSCAASGFTFSDYAMSWVRQAPGKGLEWVSWIYSGSGNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARFPIARTSNSQSSYDGMDVWGQGTLVTVSSASTKGPSVFPLAPCSRSTSESTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTKTYTCNVDHKPSNTKVDK
EVQVLESGGGLVQPGGSLRLSCAASGFTFSSYDMSWVRQAPGKGLEWVSGISYSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDVNFVPLVTFDYWGQGTLVTVSSGGGGSGGGGSGGGGSQSVLTQPPSASGTPGQRVTLSCTGSSSNIGSNSVTWYQQLPGTAPKLLIYDDNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCGTWDYSLSAYVFGGGTKLTVLGGGGSGGGGSGGGGSQSVLTQPPSASGTPGQRVTISCSGSSSNIGSNAVSWYQQLPGTAPKLLIYADNKRPSGV...
19.30406
31.87697
454
478
198
441
222
475
97
fab region of heavy chain from k202.b, bispecific antibody
scfv region and fab region of light chain from k202.b, bispecific antibody fusion protein
homo sapiens
homo sapiens
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
102
25
0.52
HL
train
8df5_A_B
8df5
sars-cov-2 beta rbd in complex with human ace2 and s304 fab and s309 fab
no
viral protein/hydrolase/immune system
2022-06-21
2022-08-03
x-ray diffraction
2.7
0.217
0.177
35762884
10.1126/science.abo7896
0
auth_asym_id
FabH:FabL
IGHV1
IGKV3
A
B
QVQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYMELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
EIVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQHDTSLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYMELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
EIVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQHDTSLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
22.618872
22.820435
230
214
224
214
228
214
95
s309 fab heavy chain
s309 fab light chain
homo sapiens
homo sapiens
R
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
39
17
0.94
HL
train
8df5_H_L
8df5
sars-cov-2 beta rbd in complex with human ace2 and s304 fab and s309 fab
no
viral protein/hydrolase/immune system
2022-06-21
2022-08-03
x-ray diffraction
2.7
0.217
0.177
35762884
10.1126/science.abo7896
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
H
L
QVQLVESGGGLVQPGGSLRLSCAASGFTFSSYDMHWVRQTTGKGLEWVSTIGTAGDTYYPDSVKGRFTISREDAKNSLYLQMNSLRAGDTAVYYCARGDSSGYYYYFDYWGQGTLLTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKAC
DIQMTQSPSSLSAAVGDRVTITCRASQSIGSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFAIYYCQQSYVSPTYTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVESGGGLVQPGGSLRLSCAASGFTFSSYDMHWVRQTTGKGLEWVSTIGTAGDTYYPDSVKGRFTISREDAKNSLYLQMNSLRAGDTAVYYCARGDSSGYYYYFDYWGQGTLLTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKAC
DIQMTQSPSSLSAAVGDRVTITCRASQSIGSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFAIYYCQQSYVSPTYTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
20.627106
23.481949
223
215
217
215
223
215
96
s304 fab heavy chain
s304 fab light chain
homo sapiens
homo sapiens
R
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
57
22
0.81
HL
train
8df5_C_D
8df5
sars-cov-2 beta rbd in complex with human ace2 and s304 fab and s309 fab
no
viral protein/hydrolase/immune system
2022-06-21
2022-08-03
x-ray diffraction
2.7
0.217
0.177
35762884
10.1126/science.abo7896
0
auth_asym_id
FabH:FabL
IGHV1
IGKV3
C
D
QVQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYMELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
EIVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQHDTSLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYMELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
EIVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQHDTSLTFGGGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
23.148655
22.800495
230
214
230
214
230
214
101
s309 fab heavy chain
s309 fab light chain
homo sapiens
homo sapiens
S
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
42
18
0.9
HL
train
8df5_M_N
8df5
sars-cov-2 beta rbd in complex with human ace2 and s304 fab and s309 fab
no
viral protein/hydrolase/immune system
2022-06-21
2022-08-03
x-ray diffraction
2.7
0.217
0.177
35762884
10.1126/science.abo7896
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
M
N
QVQLVESGGGLVQPGGSLRLSCAASGFTFSSYDMHWVRQTTGKGLEWVSTIGTAGDTYYPDSVKGRFTISREDAKNSLYLQMNSLRAGDTAVYYCARGDSSGYYYYFDYWGQGTLLTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKAC
DIQMTQSPSSLSAAVGDRVTITCRASQSIGSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFAIYYCQQSYVSPTYTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVESGGGLVQPGGSLRLSCAASGFTFSSYDMHWVRQTTGKGLEWVSTIGTAGDTYYPDSVKGRFTISREDAKNSLYLQMNSLRAGDTAVYYCARGDSSGYYYYFDYWGQGTLLTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
DIQMTQSPSSLSAAVGDRVTITCRASQSIGSYLNWYQQKPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFAIYYCQQSYVSPTYTFGPGTKVDIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
20.829832
23.526186
223
215
218
215
221
215
94
s304 fab heavy chain
s304 fab light chain
homo sapiens
homo sapiens
S
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
56
21
0.81
HL
train