PDB_ID_chain
stringlengths
6
10
PDB_ID
stringlengths
4
4
Title
stringlengths
4
230
Mutation(s)
stringclasses
2 values
Classification
stringclasses
305 values
Deposit_date
stringdate
1976-03-17 00:00:00
2026-01-20 00:00:00
Release_date
stringdate
1976-05-19 00:00:00
2026-02-25 00:00:00
Method
stringclasses
5 values
Resolution
stringclasses
459 values
R_free
stringclasses
227 values
R_work
stringclasses
211 values
PMID
stringlengths
4
8
DOI
stringlengths
4
68
Model_index
int64
0
76
Asym_ID_type
stringclasses
2 values
Ab_type
stringclasses
30 values
H_subgroup
stringclasses
8 values
L_subgroup
stringclasses
19 values
H_chain_ID
stringclasses
60 values
L_chain_ID
stringclasses
58 values
H_fas_seq
stringlengths
4
919
L_fas_seq
stringlengths
4
627
H_filled_pdb_seq
stringlengths
4
896
L_filled_pdb_seq
stringlengths
4
523
H_mean_radius
float64
0
79.7
L_mean_radius
float64
0
84.3
H_fas_seq_len
int64
0
919
L_fas_seq_len
int64
0
627
H_pdb_seq_len
int64
0
879
L_pdb_seq_len
int64
0
523
H_filled_seq_len
int64
0
896
L_filled_seq_len
int64
0
523
HL_inf_res_num
int64
0
175
H_mol_name
stringlengths
2
331
L_mol_name
stringlengths
2
151
H_species
stringclasses
68 values
L_species
stringclasses
42 values
Ag_chain_ID(s)
stringclasses
279 values
Ag_type(s)
stringclasses
16 values
Ag_mol_name(s)
stringlengths
2
390
Ag_species
stringclasses
743 values
Ab_ag_inf_res_num
stringlengths
1
11
CDR_inf_res_num
stringclasses
444 values
CDR_inf_res_ratio
stringlengths
1
19
hl_label
stringclasses
3 values
split
stringclasses
1 value
7y6l_H_L
7y6l
the sars-cov-2 receptor binding domain bound with the fab fragment of a human neutralizing antibody ab816
yes
viral protein
2022-06-21
2023-06-21
electron microscopy
3.5
N.A.
N.A.
37288342
10.1016/j.isci.2023.106955
0
auth_asym_id
VH:VL
IGHV5
IGKV1
H
L
MDPKGSLSWRILLFLSLAFELSYGLEQVQLVQSGAEVKKPGESLMISCKASGYNFRNYWIAWVRQMPGKGLEWMGIIHPGDSDIRYRPSLQGHVTISADKSITTAYLQWGSLKASDTAMYYCTRITTDADSSGLFHYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCENLYFQGHHHHHH
MDPKGSLSWRILLFLSLAFELSYGLEEIVLTQSPSTLSASVGDRVTITCRASQNIYTWLAWYQRKPGKAPKVLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYKSAWSFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
QVQLVQSGAEVKKPGESLMISCKASGYNFRNYWIAWVRQMPGKGLEWMGIIHPGDSDIRYRPSLQGHVTISADKSITTAYLQWGSLKASDTAMYYCTRITTDADSSGLFHYWGQGTLVTVSS
EIVLTQSPSTLSASVGDRVTITCRASQNIYTWLAWYQRKPGKAPKVLIYKASSLESGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCQQYKSAWSFGQGTKVEIK
14.016032
13.181698
264
238
122
106
122
106
40
ab816 heavy chain
ab816 light chain
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
34
15
0.83
HL
train
7y6n_H_L
7y6n
the sars-cov-2 receptor binding domain bound with the fab fragment of a human neutralizing antibody ab803
yes
viral protein
2022-06-21
2023-06-21
electron microscopy
4.4
N.A.
N.A.
37288342
10.1016/j.isci.2023.106955
0
auth_asym_id
VH:VL
IGHV3
IGKV1
H
L
MDPKGSLSWRILLFLSLAFELSYGLEVQLVESGGGLVQPGRSLRVSCAASGFTFDDYAMHWVRQTPRKGLEWVAGISRNSAAIAYADSVKGRFTISRDNAKNSVFLQMNGLRADDTALYYCVKSPRYGWGSPDYSFDFWGRGTLVTVSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCENLYFQGHHHHHH
MDPKGSLSWRILLFLSLAFELSYGLEIQLTQSPSSLSASVGDRVTITCRASQNIGTYLNWYQQEPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYCCQQSFTTPLTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQLVESGGGLVQPGRSLRVSCAASGFTFDDYAMHWVRQTPRKGLEWVAGISRNSAAIAYADSVKGRFTISRDNAKNSVFLQMNGLRADDTALYYCVKSPRYGWGSPDYSFDFWGRGTLVTVS
IQLTQSPSSLSASVGDRVTITCRASQNIGTYLNWYQQEPGKAPKLLIYAASSLQSGVPSRFSGSGSGTDFTLTISSLQPEDFATYCCQQSFTTPLTFGQGTKVEIK
14.345306
13.320948
264
239
122
106
122
106
41
ab803 heavy chain
ab803 light chain
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
28
16
1
HL
train
7y71_O_P
7y71
sars-cov-2 spike glycoprotein trimer complexed with fab fragment of anti-rbd antibody e7
yes
viral protein
2022-06-21
2023-08-02
electron microscopy
3.12
N.A.
N.A.
37494438
10.1126/sciadv.ade3470
0
auth_asym_id
FabH:FabL
IGHV4
IGKV2
O
P
QVQLQESGPGLVKPSETLSLTCTVSGGFIGPHYWSWVRQPPGKGLEWIGYIYISGSTNYNPSLKSRLTISVDMSKSQFSLTLSSATAADTAVYYCARGGGYLETGPFEYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
DIVMTQSPLSLPVTPGEPASISCRSSQSLLQNNGYNYLAWYLQKPGQSPQLLIYLSSTRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQSLQIPGTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLQESGPGLVKPSETLSLTCTVSGGFIGPHYWSWVRQPPGKGLEWIGYIYISGSTNYNPSLKSRLTISVDMSKSQFSLTLSSATAADTAVYYCARGGGYLETGPFEYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
DIVMTQSPLSLPVTPGEPASISCRSSQSLLQNNGYNYLAWYLQKPGQSPQLLIYLSSTRASGVPDRFSGSGSGTDFTLKISRVEAEDVGVYYCMQSLQIPGTFGQGTRLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
21.476303
24.350454
221
219
221
219
221
219
92
fab e7 heavy chain
fab e7 light chain
homo sapiens
homo sapiens
A;C
protein;protein
spike glycoprotein;spike glycoprotein
homo sapiens;homo sapiens
41;20
15;6
0.83;0.55
HL
train
7y7m_F_G
7y7m
the structure of coxsackievirus a16 mature virion in complex with fab 8c4
no
virus
2022-06-22
2022-08-24
electron microscopy
3.05
N.A.
N.A.
36543790
10.1038/s41467-022-35575-w
0
auth_asym_id
FabH:FabL
IGHV1
IGKV1
F
G
QVQLQQSGPELVKPGASVKISCKASGYAFSTSWMNWVIQRPGQGLEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARRDYGYFDYWGQGTTLTVSSAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKL
DIQMTQSSSYLSVSLGGRVTITCKASDHINNWLAWYQQKPGNAPRLLISGATSLETGVPSRFSGSGSGKDYTLSITSLQTEDVATYYCQQYWNSPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
QVQLQQSGPELVKPGASVKISCKASGYAFSTSWMNWVIQRPGQGLEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARRDYGYFDYWGQGTTLTVSSAKTTPPSVYPLAPGCGDTTGSSVTLGCLVKGYFPESVTVTWNSGSLSSSVHTFPALLQSGLYTMSSSVTVPSSTWPSQTVTCSVAHPASSTTVDKKL
DIQMTQSSSYLSVSLGGRVTITCKASDHINNWLAWYQQKPGNAPRLLISGATSLETGVPSRFSGSGSGKDYTLSITSLQTEDVATYYCQQYWNSPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE
23.227232
23.40757
214
214
214
213
214
213
92
the heavy chain of fab 8c4
the light chain of fab 8c4
coxsackievirus a16
coxsackievirus a16
C
protein
capsid protein vp3
coxsackievirus a16
14
7
1
HL
train
8dfg_H_L
8dfg
crystal structure of potently neutralizing human monoclonal antibody 42d6 fab in complex with msp1-19
yes
structural protein/immune system
2022-06-22
2022-10-12
x-ray diffraction
2
0.266
0.225
36202833
10.1038/s41467-022-33336-3
0
auth_asym_id
FabH:FabL
IGHV4
IGKV3
H
L
MGIQVQLQESGPGLVKSSETLSLTCNVFRGSIGSYYWSWIRQPAGRGLEWIGRVYSNGRANYNPSFKSRVTISVDKSKNQFSLRLTSVTAADTAVYYCAREIYYHDSTGSLYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTGGSHHHHHH
MGIEIVMTQSPATLSVSPGERATLSCRASQTVSSSLAWYQHKPGQAPRLLIYGASTRATGVPVRFSGSGSGTEFTLTINSMHSEDFAIYYCLQFNDWPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLQESGPGLVKSSETLSLTCNVFRGSIGSYYWSWIRQPAGRGLEWIGRVYSNGRANYNPSFKSRVTISVDKSKNQFSLRLTSVTAADTAVYYCAREIYYHDSTGSLYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
EIVMTQSPATLSVSPGERATLSCRASQTVSSSLAWYQHKPGQAPRLLIYGASTRATGVPVRFSGSGSGTEFTLTINSMHSEDFAIYYCLQFNDWPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
22.798807
22.799385
242
217
218
213
224
213
94
42d6 fab heavy chain
42d6 fab light chain
homo sapiens
homo sapiens
A
protein
merozoite surface protein 1
plasmodium falciparum 3d7
40
18
0.95
HL
train
8dfg_I_M
8dfg
crystal structure of potently neutralizing human monoclonal antibody 42d6 fab in complex with msp1-19
yes
structural protein/immune system
2022-06-22
2022-10-12
x-ray diffraction
2
0.266
0.225
36202833
10.1038/s41467-022-33336-3
0
auth_asym_id
FabH:FabL
IGHV4
IGKV3
I
M
MGIQVQLQESGPGLVKSSETLSLTCNVFRGSIGSYYWSWIRQPAGRGLEWIGRVYSNGRANYNPSFKSRVTISVDKSKNQFSLRLTSVTAADTAVYYCAREIYYHDSTGSLYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTGGSHHHHHH
MGIEIVMTQSPATLSVSPGERATLSCRASQTVSSSLAWYQHKPGQAPRLLIYGASTRATGVPVRFSGSGSGTEFTLTINSMHSEDFAIYYCLQFNDWPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
VQLQESGPGLVKSSETLSLTCNVFRGSIGSYYWSWIRQPAGRGLEWIGRVYSNGRANYNPSFKSRVTISVDKSKNQFSLRLTSVTAADTAVYYCAREIYYHDSTGSLYYFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
EIVMTQSPATLSVSPGERATLSCRASQTVSSSLAWYQHKPGQAPRLLIYGASTRATGVPVRFSGSGSGTEFTLTINSMHSEDFAIYYCLQFNDWPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
22.744335
22.820824
242
217
216
213
223
213
94
42d6 fab heavy chain
42d6 fab light chain
homo sapiens
homo sapiens
B
protein
merozoite surface protein 1
plasmodium falciparum 3d7
41
18
0.95
HL
train
8dfh_H_L
8dfh
crystal structure of non-neutralizing / interfering human monoclonal antibody 42c3 fab in complex with msp1-19
yes
structural protein/immune system
2022-06-22
2022-10-12
x-ray diffraction
2.3
0.233
0.209
36202833
10.1038/s41467-022-33336-3
0
auth_asym_id
FabH:FabL
IGHV3
IGLV1
H
L
MGIQVQVVESGGGVVQPGGSLRLSCLASGFTFSDFGFHWVRQSPGKGLEWVTYTRYDGRNEYGESVKGRFTISRDNAKNTVYLQMNTLRLEDTAIYYCGRSGAKWASEPMDVWGGGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTGGSHHHHHH
MGIQSVLTQPPSASGTPGQRVTISCSGSKSNIGSYYVYWYQQVPGTAPKLLIHRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYHCSVWDDNLNGLVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
QVQVVESGGGVVQPGGSLRLSCLASGFTFSDFGFHWVRQSPGKGLEWVTYTRYDGRNEYGESVKGRFTISRDNAKNTVYLQMNTLRLEDTAIYYCGRSGAKWASEPMDVWGGGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
VLTQPPSASGTPGQRVTISCSGSKSNIGSYYVYWYQQVPGTAPKLLIHRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYHCSVWDDNLNGLVFGGGTKLTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
24.445108
20.513296
238
216
218
211
220
211
99
42c3 fab heavy chain
42c3 fab light chain
homo sapiens
homo sapiens
A
protein
merozoite surface protein 1
plasmodium falciparum 3d7
49
20
0.83
HL
train
8dfi_H_L
8dfi
crystal structure of moderately neutralizing / interfering human monoclonal antibody 42c11 fab in complex with msp1-19
yes
structural protein/immune system
2022-06-22
2022-10-12
x-ray diffraction
1.9
0.2
0.175
36202833
10.1038/s41467-022-33336-3
0
auth_asym_id
FabH:FabL
IGHV3
IGLV1
H
L
MGIQVQLVESGGGVVQPGGSLRLSCAASGFIFSSYSMHWVRQAPGKGLEWVAFIRYDGRREYYADSVKGRFTVSRDNIMNTVFLQMNNLRPEDTATYYCAKVGWTWVSEPADVWGEGATVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTGGSHHHHHH
MGIQSVLTQPPSTSGTPGQGVTISCSGSRSNVGTNYVYWYQQIPGRAPKLLINRNTQRPSGVPVRFSGSKSGTTAFLAITGLRSEDEADYFCAVWDGDLSGVIFGGGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
QVQLVESGGGVVQPGGSLRLSCAASGFIFSSYSMHWVRQAPGKGLEWVAFIRYDGRREYYADSVKGRFTVSRDNIMNTVFLQMNNLRPEDTATYYCAKVGWTWVSEPADVWGEGATVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
SVLTQPPSTSGTPGQGVTISCSGSRSNVGTNYVYWYQQIPGRAPKLLINRNTQRPSGVPVRFSGSKSGTTAFLAITGLRSEDEADYFCAVWDGDLSGVIFGGGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTE
24.31037
20.660608
239
219
212
213
222
213
87
42c11 fab heavy chain
42c11 fab light chain
homo sapiens
homo sapiens
A
protein
merozoite surface protein 1
plasmodium falciparum 3d7
55
23
0.82
HL
train
7y7k_B_C
7y7k
sars-cov-2 rbd in complex with 1f fab
no
viral protein/immune system
2022-06-22
2023-02-22
electron microscopy
4.4
N.A.
N.A.
36726762
10.1093/procel/pwac042
0
auth_asym_id
VH:VL
IGHV4
IGLV1
B
C
EVQLVESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYRGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARHVRSAYYYGSGSYRDEGNWFDPWGQGTLVTVSS
QSVLTQPPSVSGAPGQRVTISCTGTRSNIGAGHDVHWYQQLPGTAPKLLIYGNNNRPSGVPDRFSGAKSGTSASLAITGLQAEDEADYYCQSYDRTLTSYVFGTGTKVTVL
EVQLVESGPGLVKPSETLSLTCTVSGGSISSSSYYWGWIRQPPGKGLEWIGSIYYRGSTYYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAVYYCARHVRSAYYYGSGSYRDEGNWFDPWGQGTLVTVSS
QSVLTQPPSVSGAPGQRVTISCTGTRSNIGAGHDVHWYQQLPGTAPKLLIYGNNNRPSGVPDRFSGAKSGTSASLAITGLQAEDEADYYCQSYDRTLTSYVFGTGTKVTVL
14.623396
13.379422
132
111
132
111
132
111
45
1f vh
1f vl
homo sapiens
homo sapiens
A
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
26
13
1
HL
train
7y89_S
7y89
structure of the gpr17-gi complex
no
membrane protein
2022-06-23
2022-10-12
electron microscopy
3.02
N.A.
N.A.
36105372
10.1002/mco2.159
0
auth_asym_id
scFv
N.A.
N.A.
S
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.633667
0
248
0
233
0
248
0
0
guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2
N.A.
homo sapiens
N.A.
C;B
protein;protein
guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
31;24
19;9
0.95;0.75
H_only
train
8dg8_H_L
8dg8
cryo-em structure of hpiv3 prefusion f trimer in complex with 3x1 fab
no
immune system
2022-06-23
2023-02-22
electron microscopy
3.62
N.A.
N.A.
36781872
10.1038/s41467-023-36459-3
0
auth_asym_id
VH:VL
IGHV3
IGLV3
H
L
EVQLLESGGGLVQPGGSLRLSCAASGFTFSSFGMSWVRQSPGKGLEWVADISHSAGFLNYADSVKGRFTVSRDNSKSTLHLQMKSLRAEDTAVYYCAKRLAGLPDLEWLLYPNFLDHWGQGTLVTVSS
SSELTQDPAVSVALGQTVRITCQGDILRTYYVSWYQQKPGQAPLLVIYGKNNRPSVIPDRFSGSTSGDTASLTITGAQAEDEAEYYCSSRDRSGNHVLFGGGTKLTVL
QLLESGGGLVQPGGSLRLSCAASGFTFSSFGMSWVRQSPGKGLEWVADISHSAGFLNYADSVKGRFTVSRDNSKSTLHLQMKSLRAEDTAVYYCAKRLAGLPDLEWLLYPNFLDHWGQGTLVTVS
ELTQDPAVSVALGQTVRITCQGDILRTYYVSWYQQKPGQAPLLVIYGKNNRPSVIPDRFSGSTSGDTASLTITGAQAEDEAEYYCSSRDRSGNHVLFGGGTKLTV
14.091997
13.293667
128
108
125
103
125
105
50
3x1 monoclonal antibody, vh region
3x1 monoclonal antibody, vl region
homo sapiens
homo sapiens
B
protein
fusion glycoprotein f0
human parainfluenza 3 virus (strain nih 47885)
41
22
1
HL
train
8dg9_H_L
8dg9
cryo-em structure of rsv prefusion f trimer in complex with three mxr fabs
no
immune system
2022-06-23
2023-02-22
electron microscopy
2.24
N.A.
N.A.
36781872
10.1038/s41467-023-36459-3
0
auth_asym_id
VH:VL
IGHV3
IGLV1
H
L
EVQVVESGGGLVKPGGSLRLSCAASGFPFSSYKMDWVRQAPGKGLEWVSSISASGSYINYADSVKGRFTISRDNAKNSLYLQMKSLRADDTAVYFCARDGGRELSPFEKWGQGILVTVSS
QSVLTQPPSVSGAPGQRVTISCTGTNSNIGTGYDVHWYQQLPGTAPKVVLFDNNNRPSGVPDRFSGSKSGTSAALAITGLQAEDEAVYYCQSYDKSLGGWVFGGGTKLTVL
EVQVVESGGGLVKPGGSLRLSCAASGFPFSSYKMDWVRQAPGKGLEWVSSISASGSYINYADSVKGRFTISRDNAKNSLYLQMKSLRADDTAVYFCARDGGRELSPFEKWGQGILVTVSS
QSVLTQPPSVSGAPGQRVTISCTGTNSNIGTGYDVHWYQQLPGTAPKVVLFDNNNRPSGVPDRFSGSKSGTSAALAITGLQAEDEAVYYCQSYDKSLGGWVFGGGTKLTVL
13.618483
13.286965
120
111
120
111
120
111
43
mab mxr heavy chain, vh region
mab mxr light chain, vl region
homo sapiens
homo sapiens
A
protein
fusion glycoprotein f0
respiratory syncytial virus a2
51
19
0.79
HL
train
8dg9_F_G
8dg9
cryo-em structure of rsv prefusion f trimer in complex with three mxr fabs
no
immune system
2022-06-23
2023-02-22
electron microscopy
2.24
N.A.
N.A.
36781872
10.1038/s41467-023-36459-3
0
auth_asym_id
VH:VL
IGHV3
IGLV1
F
G
EVQVVESGGGLVKPGGSLRLSCAASGFPFSSYKMDWVRQAPGKGLEWVSSISASGSYINYADSVKGRFTISRDNAKNSLYLQMKSLRADDTAVYFCARDGGRELSPFEKWGQGILVTVSS
QSVLTQPPSVSGAPGQRVTISCTGTNSNIGTGYDVHWYQQLPGTAPKVVLFDNNNRPSGVPDRFSGSKSGTSAALAITGLQAEDEAVYYCQSYDKSLGGWVFGGGTKLTVL
EVQVVESGGGLVKPGGSLRLSCAASGFPFSSYKMDWVRQAPGKGLEWVSSISASGSYINYADSVKGRFTISRDNAKNSLYLQMKSLRADDTAVYFCARDGGRELSPFEKWGQGILVTVSS
QSVLTQPPSVSGAPGQRVTISCTGTNSNIGTGYDVHWYQQLPGTAPKVVLFDNNNRPSGVPDRFSGSKSGTSAALAITGLQAEDEAVYYCQSYDKSLGGWVFGGGTKLTVL
13.589661
13.272069
120
111
120
111
120
111
40
mab mxr heavy chain, vh region
mab mxr light chain, vl region
homo sapiens
homo sapiens
B
protein
fusion glycoprotein f0
respiratory syncytial virus a2
51
19
0.79
HL
train
8dg9_D_E
8dg9
cryo-em structure of rsv prefusion f trimer in complex with three mxr fabs
no
immune system
2022-06-23
2023-02-22
electron microscopy
2.24
N.A.
N.A.
36781872
10.1038/s41467-023-36459-3
0
auth_asym_id
VH:VL
IGHV3
IGLV1
D
E
EVQVVESGGGLVKPGGSLRLSCAASGFPFSSYKMDWVRQAPGKGLEWVSSISASGSYINYADSVKGRFTISRDNAKNSLYLQMKSLRADDTAVYFCARDGGRELSPFEKWGQGILVTVSS
QSVLTQPPSVSGAPGQRVTISCTGTNSNIGTGYDVHWYQQLPGTAPKVVLFDNNNRPSGVPDRFSGSKSGTSAALAITGLQAEDEAVYYCQSYDKSLGGWVFGGGTKLTVL
EVQVVESGGGLVKPGGSLRLSCAASGFPFSSYKMDWVRQAPGKGLEWVSSISASGSYINYADSVKGRFTISRDNAKNSLYLQMKSLRADDTAVYFCARDGGRELSPFEKWGQGILVTVSS
QSVLTQPPSVSGAPGQRVTISCTGTNSNIGTGYDVHWYQQLPGTAPKVVLFDNNNRPSGVPDRFSGSKSGTSAALAITGLQAEDEAVYYCQSYDKSLGGWVFGGGTKLTVL
13.589687
13.270212
120
111
120
111
120
111
41
mab mxr heavy chain, vh region
mab mxr light chain, vl region
homo sapiens
homo sapiens
C
protein
fusion glycoprotein f0
respiratory syncytial virus a2
50
19
0.79
HL
train
8dgu_H_L
8dgu
crystal structure of sars-cov-2 spike stem helix peptide in complex with fab of broadly neutralizing antibody cc25.106 isolated from a vaccinated covid-19 convalescent
no
immune system
2022-06-24
2023-01-25
x-ray diffraction
1.89
0.245
0.214
36889306
10.1016/j.immuni.2023.02.005
0
auth_asym_id
FabH:FabL
IGHV1
IGLV1
H
L
EVQLVQSGAEVKKPGASLKVSCKASGYTFTDYYMHWVRQAPGQGLEWMGIIKPSAGNTRNAQKFQGRVTMTRDTSTSTVYMELSALRFEDTAVYYCARGGVHGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
QSVLTQPPSVSAPPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIHENNQRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDTNLGAFVFGAATRVTVLGQPKANPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
EVQLVQSGAEVKKPGASLKVSCKASGYTFTDYYMHWVRQAPGQGLEWMGIIKPSAGNTRNAQKFQGRVTMTRDTSTSTVYMELSALRFEDTAVYYCARGGVHGLDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
QSVLTQPPSVSAPPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIHENNQRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGTWDTNLGAFVFGAATRVTVLGQPKANPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
20.572739
23.818335
220
216
218
213
218
213
98
antibody cc25.106 fab heavy chain
antibody cc25.106 fab light chain
homo sapiens
homo sapiens
A
peptide
spike protein s2'
severe acute respiratory syndrome coronavirus 2
34
18
0.72
HL
train
8dgv_H_L
8dgv
crystal structure of mers-cov spike stem helix peptide in complex with fab of broadly neutralizing antibody cc99.103 isolated from a vaccinated covid-19 convalescent
no
immune system
2022-06-24
2023-01-25
x-ray diffraction
2.3
0.249
0.203
36889306
10.1016/j.immuni.2023.02.005
0
auth_asym_id
FabH:FabL
IGHV1
IGKV3
H
L
QVQLVQSGAEMKKPGASVKISCKASGYTFTSDYMHWVRQAPGQGLEWMGIVNPSGSGTRYAQKFQGRVTMTRDTPTKTFYIELTRLKSDDTAVYYCASGILTGLFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
DVVMTQSPGTLSLSAGERATLSCRASQTMTKNYVAWYQQKPGQAPRLLIYGASTRATGIPDRFSGSGSGTDFTLTISRLAPEDFAVYYCLQYGSSPPIFTFGPGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGECS
QVQLVQSGAEMKKPGASVKISCKASGYTFTSDYMHWVRQAPGQGLEWMGIVNPSGSGTRYAQKFQGRVTMTRDTPTKTFYIELTRLKSDDTAVYYCASGILTGLFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
PGTLSLSAGERATLSCRASQTMTKNYVAWYQQKPGQAPRLLIYGASTRATGIPDRFSGSGSGTDFTLTISRLAPEDFAVYYCLQYGSSPPIFTFGPGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRG
21.427414
22.935322
221
218
212
208
218
208
89
antibody cc99.103 fab heavy chain
antibody cc99.103 fab light chain
homo sapiens
homo sapiens
A
peptide
spike protein s2'
middle east respiratory syndrome-related coronavirus (isolate united kingdom/h123990006/2012)
36
18
0.72
HL
train
8dgw_A_B
8dgw
crystal structure of hcov-hku1 spike stem helix peptide in complex with fab of broadly neutralizing antibody cc95.108 isolated from a vaccinated covid-19 convalescent
no
immune system
2022-06-24
2023-01-25
x-ray diffraction
2.81
0.248
0.217
36889306
10.1016/j.immuni.2023.02.005
0
auth_asym_id
FabH:FabL
IGHV1
IGLV1
A
B
QVQLVQSGTEVRQPGASVRVSCKASGYTFTDSYIHWVRQAPGQGLEWMGIIKPSGGNTRYAQRFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARDSRGPGIFWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
QSVLTQPPSVSAAPERKVTISCSGSSSNIGTNFVSWYQQLPGTAPKLLIYENNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGAWDSTPGTWVFGGGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
QVQLVQSGTEVRQPGASVRVSCKASGYTFTDSYIHWVRQAPGQGLEWMGIIKPSGGNTRYAQRFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARDSRGPGIFWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
VLTQPPSVSAAPERKVTISCSGSSSNIGTNFVSWYQQLPGTAPKLLIYENNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGAWDSTPGTWVFGGGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP
20.73986
23.895044
220
216
218
207
218
210
101
antibody cc95.108 fab heavy chain
antibody cc95.108 fab light chain
homo sapiens
homo sapiens
G;I
peptide;peptide
spike protein s2';spike protein s2'
human coronavirus hku1 (isolate n1);human coronavirus hku1 (isolate n1)
21;35
10;17
0.83;0.71
HL
train
8dgw_H_L
8dgw
crystal structure of hcov-hku1 spike stem helix peptide in complex with fab of broadly neutralizing antibody cc95.108 isolated from a vaccinated covid-19 convalescent
no
immune system
2022-06-24
2023-01-25
x-ray diffraction
2.81
0.248
0.217
36889306
10.1016/j.immuni.2023.02.005
0
auth_asym_id
FabH:FabL
IGHV1
IGLV1
H
L
QVQLVQSGTEVRQPGASVRVSCKASGYTFTDSYIHWVRQAPGQGLEWMGIIKPSGGNTRYAQRFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARDSRGPGIFWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
QSVLTQPPSVSAAPERKVTISCSGSSSNIGTNFVSWYQQLPGTAPKLLIYENNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGAWDSTPGTWVFGGGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
QVQLVQSGTEVRQPGASVRVSCKASGYTFTDSYIHWVRQAPGQGLEWMGIIKPSGGNTRYAQRFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARDSRGPGIFWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEP
SVLTQPPSVSAAPERKVTISCSGSSSNIGTNFVSWYQQLPGTAPKLLIYENNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGAWDSTPGTWVFGGGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP
20.633247
23.715668
220
216
213
211
217
211
93
antibody cc95.108 fab heavy chain
antibody cc95.108 fab light chain
homo sapiens
homo sapiens
G;I
peptide;peptide
spike protein s2';spike protein s2'
human coronavirus hku1 (isolate n1);human coronavirus hku1 (isolate n1)
34;20
16;11
0.73;0.92
HL
train
8dgw_C_D
8dgw
crystal structure of hcov-hku1 spike stem helix peptide in complex with fab of broadly neutralizing antibody cc95.108 isolated from a vaccinated covid-19 convalescent
no
immune system
2022-06-24
2023-01-25
x-ray diffraction
2.81
0.248
0.217
36889306
10.1016/j.immuni.2023.02.005
0
auth_asym_id
FabH:FabL
IGHV1
IGLV1
C
D
QVQLVQSGTEVRQPGASVRVSCKASGYTFTDSYIHWVRQAPGQGLEWMGIIKPSGGNTRYAQRFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARDSRGPGIFWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
QSVLTQPPSVSAAPERKVTISCSGSSSNIGTNFVSWYQQLPGTAPKLLIYENNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGAWDSTPGTWVFGGGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
QVQLVQSGTEVRQPGASVRVSCKASGYTFTDSYIHWVRQAPGQGLEWMGIIKPSGGNTRYAQRFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARDSRGPGIFWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKS
VLTQPPSVSAAPERKVTISCSGSSSNIGTNFVSWYQQLPGTAPKLLIYENNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGAWDSTPGTWVFGGGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP
20.418562
23.931654
220
216
213
210
219
210
91
antibody cc95.108 fab heavy chain
antibody cc95.108 fab light chain
homo sapiens
homo sapiens
J;K
peptide;peptide
spike protein s2';spike protein s2'
human coronavirus hku1 (isolate n1);human coronavirus hku1 (isolate n1)
33;20
16;11
0.73;0.92
HL
train
8dgw_E_F
8dgw
crystal structure of hcov-hku1 spike stem helix peptide in complex with fab of broadly neutralizing antibody cc95.108 isolated from a vaccinated covid-19 convalescent
no
immune system
2022-06-24
2023-01-25
x-ray diffraction
2.81
0.248
0.217
36889306
10.1016/j.immuni.2023.02.005
0
auth_asym_id
FabH:FabL
IGHV1
IGLV1
E
F
QVQLVQSGTEVRQPGASVRVSCKASGYTFTDSYIHWVRQAPGQGLEWMGIIKPSGGNTRYAQRFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARDSRGPGIFWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
QSVLTQPPSVSAAPERKVTISCSGSSSNIGTNFVSWYQQLPGTAPKLLIYENNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGAWDSTPGTWVFGGGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
QVQLVQSGTEVRQPGASVRVSCKASGYTFTDSYIHWVRQAPGQGLEWMGIIKPSGGNTRYAQRFQGRVTMTRDTSTSTVYMELSSLRSEDTAVYYCARDSRGPGIFWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPK
VLTQPPSVSAAPERKVTISCSGSSSNIGTNFVSWYQQLPGTAPKLLIYENNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYCGAWDSTPGTWVFGGGTRLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP
20.353434
23.585472
220
216
210
210
218
210
89
antibody cc95.108 fab heavy chain
antibody cc95.108 fab light chain
homo sapiens
homo sapiens
J;K
peptide;peptide
spike protein s2';spike protein s2'
human coronavirus hku1 (isolate n1);human coronavirus hku1 (isolate n1)
21;28
11;11
0.85;0.65
HL
train
7y9t_C
7y9t
structure of the auxin exporter pin1 in arabidopsis thaliana in the apo state
no
transport protein
2022-06-26
2022-09-07
electron microscopy
3.1
N.A.
N.A.
35917925
10.1038/s41586-022-05143-9
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
GSSSQVQLVESGGGLVQAGGSLRLSCAASGFPVNISWMEWYRQVPGKEREWVAAIQSTGSYTWYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCRVKVGAYYRGQGTQVTVSAGRAG
N.A.
SSQVQLVESGGGLVQAGGSLRLSCAASGFPVNISWMEWYRQVPGKEREWVAAIQSTGSYTWYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCRVKVGAYYRGQGTQVTVS
N.A.
14.018378
0
123
0
116
0
116
0
0
nanobody
N.A.
escherichia coli
N.A.
A
protein
auxin efflux carrier component 1
arabidopsis thaliana
32
6
0.35
H_only
train
7y9t_D
7y9t
structure of the auxin exporter pin1 in arabidopsis thaliana in the apo state
no
transport protein
2022-06-26
2022-09-07
electron microscopy
3.1
N.A.
N.A.
35917925
10.1038/s41586-022-05143-9
0
auth_asym_id
VHH
IGHV3
N.A.
D
N.A.
GSSSQVQLVESGGGLVQAGGSLRLSCAASGFPVNISWMEWYRQVPGKEREWVAAIQSTGSYTWYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCRVKVGAYYRGQGTQVTVSAGRAG
N.A.
SSQVQLVESGGGLVQAGGSLRLSCAASGFPVNISWMEWYRQVPGKEREWVAAIQSTGSYTWYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCRVKVGAYYRGQGTQVTVS
N.A.
14.018386
0
123
0
116
0
116
0
0
nanobody
N.A.
escherichia coli
N.A.
B
protein
auxin efflux carrier component 1
arabidopsis thaliana
32
6
0.35
H_only
train
7y9u_C
7y9u
structure of the auxin exporter pin1 in arabidopsis thaliana in the npa-bound state
no
transport protein
2022-06-26
2022-09-07
electron microscopy
3.3
N.A.
N.A.
35917925
10.1038/s41586-022-05143-9
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
GSSSQVQLVESGGGLVQAGGSLRLSCAASGFPVNISWMEWYRQVPGKEREWVAAIQSTGSYTWYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCRVKVGAYYRGQGTQVTVSAGRAG
N.A.
SQVQLVESGGGLVQAGGSLRLSCAASGFPVNISWMEWYRQVPGKEREWVAAIQSTGSYTWYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCRVKVGAYYRGQGTQVTVS
N.A.
13.827299
0
123
0
115
0
115
0
0
nanobody
N.A.
escherichia coli
N.A.
A
protein
auxin efflux carrier component 1
arabidopsis thaliana
27
5
0.33
H_only
train
7y9u_D
7y9u
structure of the auxin exporter pin1 in arabidopsis thaliana in the npa-bound state
no
transport protein
2022-06-26
2022-09-07
electron microscopy
3.3
N.A.
N.A.
35917925
10.1038/s41586-022-05143-9
0
auth_asym_id
VHH
IGHV3
N.A.
D
N.A.
GSSSQVQLVESGGGLVQAGGSLRLSCAASGFPVNISWMEWYRQVPGKEREWVAAIQSTGSYTWYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCRVKVGAYYRGQGTQVTVSAGRAG
N.A.
SQVQLVESGGGLVQAGGSLRLSCAASGFPVNISWMEWYRQVPGKEREWVAAIQSTGSYTWYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCRVKVGAYYRGQGTQVTVS
N.A.
13.82733
0
123
0
115
0
115
0
0
nanobody
N.A.
escherichia coli
N.A.
B
protein
auxin efflux carrier component 1
arabidopsis thaliana
29
5
0.31
H_only
train
7yad_C_D
7yad
cryo-em structure of s309-rbd-rbd-s309 in the s309-bound omicron spike protein (local refinement)
yes
immune system/viral protein
2022-06-27
2022-08-31
electron microscopy
2.66
N.A.
N.A.
36002453
10.1038/s41467-022-32665-7
0
auth_asym_id
VH:VL
IGHV1
IGKV3
C
D
QVQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYMELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTVS
EIVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQHDTSLTFGGGTKVEIKR
QVQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYMELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTVS
EIVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQHDTSLTFGGGTKVEIKR
14.324582
13.540113
126
108
126
108
126
108
38
s309 neutralizing antibody heavy chain
s309 neutralizing antibody light chain
homo sapiens
homo sapiens
E
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
40
15
0.83
HL
train
7yad_A_B
7yad
cryo-em structure of s309-rbd-rbd-s309 in the s309-bound omicron spike protein (local refinement)
yes
immune system/viral protein
2022-06-27
2022-08-31
electron microscopy
2.66
N.A.
N.A.
36002453
10.1038/s41467-022-32665-7
0
auth_asym_id
VH:VL
IGHV1
IGKV3
A
B
QVQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYMELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVTVS
EIVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQHDTSLTFGGGTKVEIKR
QVQLVQSGAEVKKPGASVKVSCKASGYPFTSYGISWVRQAPGQGLEWMGWISTYNGNTNYAQKFQGRVTMTTDTSTTTGYMELRRLRSDDTAVYYCARDYTRGAWFGESLIGGFDNWGQGTLVT
EIVLTQSPGTLSLSPGERATLSCRASQTVSSTSLAWYQQKPGQAPRLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQHDTSLTFGGGTKVE
14.187004
13.096893
126
108
124
105
124
105
41
s309 neutralizing antibody heavy chain
s309 neutralizing antibody light chain
homo sapiens
homo sapiens
M
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
37
15
0.83
HL
train
7yac_S
7yac
paltusotine-bound sstr2-gi complex
yes
signaling protein
2022-06-27
2023-04-19
electron microscopy
3.24
N.A.
N.A.
36810324
10.1038/s41467-023-36673-z
0
auth_asym_id
scFv
N.A.
N.A.
S
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAHHHHHHHH
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.782194
0
259
0
232
0
246
0
0
scfv16
N.A.
mus musculus
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
29;25
19;11
1.0;0.79
H_only
train
8a94_R_O
8a94
sars cov2 spike in the 2-up state in complex with fab47.
no
viral protein
2022-06-27
2023-05-03
electron microscopy
2.4
N.A.
N.A.
36574772
10.1016/j.immuni.2022.12.005
0
auth_asym_id
VH:VL
IGHV1
IGKV3
R
O
QVQLVQSGAEVKKPGSSVKVSCKASGGTFNTYAINWVRQAPGQGLEWMGRIIPMFGIANYAQKFQGTVTFTADKSTSTAYMELSSLRYEDTAVYYCARSAYYSESSGYYLDYWGQGTLVTVSS
EIVLTQSPGTLSLSPGERATLSCRASQSVSGSYLAWYQQKPGQAPSLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYVNSPRTFGQGTKLE
VQLVQSGAEVKKPGSSVKVSCKASGGTFNTYAINWVRQAPGQGLEWMGRIIPMFGIANYAQKFQGTVTFTADKSTSTAYMELSSLRYEDTAVYYCARSAYYSESSGYYLDYWGQGTLVTVSS
EIVLTQSPGTLSLSPGERATLSCRASQSVSGSYLAWYQQKPGQAPSLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYVNSPRTFGQGTKLE
13.982909
12.876963
123
106
122
106
122
106
42
fab47 (heavy chain variable domain)
fab47 (light chain variable domain)
homo sapiens
homo sapiens
A
protein
sars-cov2 spike in 2-up conformation in complex with fab47
severe acute respiratory syndrome coronavirus
45
18
0.78
HL
train
8a94_K_E
8a94
sars cov2 spike in the 2-up state in complex with fab47.
no
viral protein
2022-06-27
2023-05-03
electron microscopy
2.4
N.A.
N.A.
36574772
10.1016/j.immuni.2022.12.005
0
auth_asym_id
VH:VL
IGHV1
IGKV3
K
E
QVQLVQSGAEVKKPGSSVKVSCKASGGTFNTYAINWVRQAPGQGLEWMGRIIPMFGIANYAQKFQGTVTFTADKSTSTAYMELSSLRYEDTAVYYCARSAYYSESSGYYLDYWGQGTLVTVSS
EIVLTQSPGTLSLSPGERATLSCRASQSVSGSYLAWYQQKPGQAPSLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYVNSPRTFGQGTKLE
VQLVQSGAEVKKPGSSVKVSCKASGGTFNTYAINWVRQAPGQGLEWMGRIIPMFGIANYAQKFQGTVTFTADKSTSTAYMELSSLRYEDTAVYYCARSAYYSESSGYYLDYWGQGTLVTVSS
EIVLTQSPGTLSLSPGERATLSCRASQSVSGSYLAWYQQKPGQAPSLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYVNSPRTFGQGTKLE
14.014166
12.94021
123
106
122
106
122
106
41
fab47 (heavy chain variable domain)
fab47 (light chain variable domain)
homo sapiens
homo sapiens
B
protein
sars-cov2 spike in 2-up conformation in complex with fab47
severe acute respiratory syndrome coronavirus
44
18
0.82
HL
train
8a94_T_Q
8a94
sars cov2 spike in the 2-up state in complex with fab47.
no
viral protein
2022-06-27
2023-05-03
electron microscopy
2.4
N.A.
N.A.
36574772
10.1016/j.immuni.2022.12.005
0
auth_asym_id
VH:VL
IGHV1
IGKV3
T
Q
QVQLVQSGAEVKKPGSSVKVSCKASGGTFNTYAINWVRQAPGQGLEWMGRIIPMFGIANYAQKFQGTVTFTADKSTSTAYMELSSLRYEDTAVYYCARSAYYSESSGYYLDYWGQGTLVTVSS
EIVLTQSPGTLSLSPGERATLSCRASQSVSGSYLAWYQQKPGQAPSLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYVNSPRTFGQGTKLE
VQLVQSGAEVKKPGSSVKVSCKASGGTFNTYAINWVRQAPGQGLEWMGRIIPMFGIANYAQKFQGTVTFTADKSTSTAYMELSSLRYEDTAVYYCARSAYYSESSGYYLDYWGQGTLVTVSS
EIVLTQSPGTLSLSPGERATLSCRASQSVSGSYLAWYQQKPGQAPSLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYVNSPRTFGQGTKLE
14.025178
12.884464
123
106
122
106
122
106
40
fab47 (heavy chain variable domain)
fab47 (light chain variable domain)
homo sapiens
homo sapiens
C
protein
sars-cov2 spike in 2-up conformation in complex with fab47
severe acute respiratory syndrome coronavirus
47
19
0.79
HL
train
8a96_K_J
8a96
sars cov2 spike rbd in complex with fab47
no
viral protein
2022-06-27
2023-05-03
electron microscopy
2.7
N.A.
N.A.
36574772
10.1016/j.immuni.2022.12.005
0
auth_asym_id
VH:VL
IGHV1
IGKV3
K
J
VQLVQSGAEVKKPGSSVKVSCKASGGTFNTYAINWVRQAPGQGLEWMGRIIPMFGIANYAQKFQGTVTFTADKSTSTAYMELSSLRYEDTAVYYCARSAYYSESSGYYLDYWGQGTLVTVSS
EIVLTQSPGTLSLSPGERATLSCRASQSVSGSYLAWYQQKPGQAPSLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYVNSPRTFGQGTKLE
VQLVQSGAEVKKPGSSVKVSCKASGGTFNTYAINWVRQAPGQGLEWMGRIIPMFGIANYAQKFQGTVTFTADKSTSTAYMELSSLRYEDTAVYYCARSAYYSESSGYYLDYWGQGTLVTVSS
EIVLTQSPGTLSLSPGERATLSCRASQSVSGSYLAWYQQKPGQAPSLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYVNSPRTFGQGTKLE
14.013629
12.854329
122
106
122
106
122
106
43
fab47 heavy chain (variable domain)
fab47 light chain (variable domain)
homo sapiens
homo sapiens
C
protein
spike protein s1
severe acute respiratory syndrome coronavirus
46
20
0.83
HL
train
8a95_R_O
8a95
sars cov2 spike rbd in complex with fab47
no
viral protein
2022-06-27
2023-08-16
electron microscopy
2.64
N.A.
N.A.
36574772
10.1016/j.immuni.2022.12.005
0
auth_asym_id
VH:VL
IGHV1
IGKV3
R
O
QVQLVQSGAEVKKPGSSVKVSCKASGGTFNTYAINWVRQAPGQGLEWMGRIIPMFGIANYAQKFQGTVTFTADKSTSTAYMELSSLRYEDTAVYYCARSAYYSESSGYYLDYWGQGTLVTVSS
EIVLTQSPGTLSLSPGERATLSCRASQSVSGSYLAWYQQKPGQAPSLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYVNSPRTFGQGTKLE
VQLVQSGAEVKKPGSSVKVSCKASGGTFNTYAINWVRQAPGQGLEWMGRIIPMFGIANYAQKFQGTVTFTADKSTSTAYMELSSLRYEDTAVYYCARSAYYSESSGYYLDYWGQGTLVTVSS
EIVLTQSPGTLSLSPGERATLSCRASQSVSGSYLAWYQQKPGQAPSLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYVNSPRTFGQGTKLE
14.012695
13.012565
123
106
122
106
122
106
36
fab47 (heavy chain variable domain)
fab47 (light chain variable domain)
homo sapiens
homo sapiens
A
protein
sars-cov2 trimeric spike in 1-up conformation in complex with three fab47
severe acute respiratory syndrome coronavirus
45
16
0.73
HL
train
8a95_S_P
8a95
sars cov2 spike rbd in complex with fab47
no
viral protein
2022-06-27
2023-08-16
electron microscopy
2.64
N.A.
N.A.
36574772
10.1016/j.immuni.2022.12.005
0
auth_asym_id
VH:VL
IGHV1
IGKV3
S
P
QVQLVQSGAEVKKPGSSVKVSCKASGGTFNTYAINWVRQAPGQGLEWMGRIIPMFGIANYAQKFQGTVTFTADKSTSTAYMELSSLRYEDTAVYYCARSAYYSESSGYYLDYWGQGTLVTVSS
EIVLTQSPGTLSLSPGERATLSCRASQSVSGSYLAWYQQKPGQAPSLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYVNSPRTFGQGTKLE
VQLVQSGAEVKKPGSSVKVSCKASGGTFNTYAINWVRQAPGQGLEWMGRIIPMFGIANYAQKFQGTVTFTADKSTSTAYMELSSLRYEDTAVYYCARSAYYSESSGYYLDYWGQGTLVTVSS
EIVLTQSPGTLSLSPGERATLSCRASQSVSGSYLAWYQQKPGQAPSLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYVNSPRTFGQGTKLE
13.954579
12.893078
123
106
122
106
122
106
47
fab47 (heavy chain variable domain)
fab47 (light chain variable domain)
homo sapiens
homo sapiens
B
protein
sars-cov2 trimeric spike in 1-up conformation in complex with three fab47
severe acute respiratory syndrome coronavirus
43
18
0.78
HL
train
8a95_T_Q
8a95
sars cov2 spike rbd in complex with fab47
no
viral protein
2022-06-27
2023-08-16
electron microscopy
2.64
N.A.
N.A.
36574772
10.1016/j.immuni.2022.12.005
0
auth_asym_id
VH:VL
IGHV1
IGKV3
T
Q
QVQLVQSGAEVKKPGSSVKVSCKASGGTFNTYAINWVRQAPGQGLEWMGRIIPMFGIANYAQKFQGTVTFTADKSTSTAYMELSSLRYEDTAVYYCARSAYYSESSGYYLDYWGQGTLVTVSS
EIVLTQSPGTLSLSPGERATLSCRASQSVSGSYLAWYQQKPGQAPSLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYVNSPRTFGQGTKLE
VQLVQSGAEVKKPGSSVKVSCKASGGTFNTYAINWVRQAPGQGLEWMGRIIPMFGIANYAQKFQGTVTFTADKSTSTAYMELSSLRYEDTAVYYCARSAYYSESSGYYLDYWGQGTLVTVSS
EIVLTQSPGTLSLSPGERATLSCRASQSVSGSYLAWYQQKPGQAPSLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYVNSPRTFGQGTKLE
13.980536
12.843355
123
106
122
106
122
106
39
fab47 (heavy chain variable domain)
fab47 (light chain variable domain)
homo sapiens
homo sapiens
C
protein
sars-cov2 trimeric spike in 1-up conformation in complex with three fab47
severe acute respiratory syndrome coronavirus
44
17
0.74
HL
train
8di5_H
8di5
cryo-em structure of sars-cov-2 beta (b.1.351) spike protein in complex with vh domain f6 (focused refinement of rbd and vh f6)
yes
viral protein/immune system
2022-06-28
2022-08-24
electron microscopy
3.04
N.A.
N.A.
35875685
10.1016/j.isci.2022.104798
0
auth_asym_id
VH
IGHV3
N.A.
H
N.A.
EVQLVESGGGLVQPGGSLRLSCAASDFDFYDYEMSWVRQAPGKALEWIGNIYYSGDTFYNPSLKSRVTISRDNSKNTLYLQMNSLRAEDTATYYCARVESGSGWLDFWGQGTLVTVSS
N.A.
QLVESGGGLVQPGGSLRLSCAASDFDFYDYEMSWVRQAPGKALEWIGNIYYSGDTFYNPSLKSRVTISRDNSKNTLYLQMNSLRAEDTATYYCARVESGSGWLDFWGQGTLVTVSS
N.A.
13.721902
0
118
0
116
0
116
0
0
vh f6
N.A.
homo sapiens
N.A.
C
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
50
14
0.54
H_only
train
7yar_G_H
7yar
zikv_fab_g9e
no
virus
2022-06-28
2023-01-04
electron microscopy
5.9
N.A.
N.A.
36626401
10.1371/journal.ppat.1010814
0
auth_asym_id
FabH:FabL
IGHV3
IGLV2
G
H
RVHLVESGGGVVQPGRSLRLSCVASGFAFSNYHMHWVRQAPGKGLEWVAIIWDDGSDQYYADSVKGRFTISRDNSKNTLFLQMNRLRAEDTALYYCVGGSSAYNGDNGWREAASLDDWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
SALTQPASVSGSPGQSITIFCSGSSNDVGGYNYVSWYQQYPGKVPKLLIYDVNSRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSRRTWVFGGGTIVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
RVHLVESGGGVVQPGRSLRLSCVASGFAFSNYHMHWVRQAPGKGLEWVAIIWDDGSDQYYADSVKGRFTISRDNSKNTLFLQMNRLRAEDTALYYCVGGSSAYNGDNGWREAASLDDWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
SALTQPASVSGSPGQSITIFCSGSSNDVGGYNYVSWYQQYPGKVPKLLIYDVNSRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSRRTWVFGGGTIVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
21.535244
23.604534
231
212
230
212
230
212
88
heavy chain
light chain
homo sapiens
homo sapiens
A;C
protein;protein
e protein;e protein
zika virus zikv/h. sapiens/frenchpolynesia/10087pf/2013;zika virus zikv/h. sapiens/frenchpolynesia/10087pf/2013
42;27
21;6
1.0;0.4
HL
train
7yar_K_L
7yar
zikv_fab_g9e
no
virus
2022-06-28
2023-01-04
electron microscopy
5.9
N.A.
N.A.
36626401
10.1371/journal.ppat.1010814
0
auth_asym_id
FabH:FabL
IGHV3
IGLV2
K
L
RVHLVESGGGVVQPGRSLRLSCVASGFAFSNYHMHWVRQAPGKGLEWVAIIWDDGSDQYYADSVKGRFTISRDNSKNTLFLQMNRLRAEDTALYYCVGGSSAYNGDNGWREAASLDDWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
SALTQPASVSGSPGQSITIFCSGSSNDVGGYNYVSWYQQYPGKVPKLLIYDVNSRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSRRTWVFGGGTIVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
RVHLVESGGGVVQPGRSLRLSCVASGFAFSNYHMHWVRQAPGKGLEWVAIIWDDGSDQYYADSVKGRFTISRDNSKNTLFLQMNRLRAEDTALYYCVGGSSAYNGDNGWREAASLDDWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
SALTQPASVSGSPGQSITIFCSGSSNDVGGYNYVSWYQQYPGKVPKLLIYDVNSRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSRRTWVFGGGTIVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
21.946346
23.772589
231
212
231
212
231
212
97
heavy chain
light chain
homo sapiens
homo sapiens
B
protein
e protein
zika virus zikv/h. sapiens/frenchpolynesia/10087pf/2013
44
21
1
HL
train
7yar_I_M
7yar
zikv_fab_g9e
no
virus
2022-06-28
2023-01-04
electron microscopy
5.9
N.A.
N.A.
36626401
10.1371/journal.ppat.1010814
0
auth_asym_id
FabH:FabL
IGHV3
IGLV2
I
M
RVHLVESGGGVVQPGRSLRLSCVASGFAFSNYHMHWVRQAPGKGLEWVAIIWDDGSDQYYADSVKGRFTISRDNSKNTLFLQMNRLRAEDTALYYCVGGSSAYNGDNGWREAASLDDWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
SALTQPASVSGSPGQSITIFCSGSSNDVGGYNYVSWYQQYPGKVPKLLIYDVNSRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSRRTWVFGGGTIVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
RVHLVESGGGVVQPGRSLRLSCVASGFAFSNYHMHWVRQAPGKGLEWVAIIWDDGSDQYYADSVKGRFTISRDNSKNTLFLQMNRLRAEDTALYYCVGGSSAYNGDNGWREAASLDDWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
SALTQPASVSGSPGQSITIFCSGSSNDVGGYNYVSWYQQYPGKVPKLLIYDVNSRPSGVSNRFSGSKSGNTASLTISGLQAEDEADYYCSSYTSRRTWVFGGGTIVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
21.876778
23.79157
231
212
231
212
231
212
92
heavy chain
light chain
homo sapiens
homo sapiens
C
protein
e protein
zika virus zikv/h. sapiens/frenchpolynesia/10087pf/2013
44
21
0.95
HL
train
7yag_C
7yag
cryoem structure of spca1a in e1-ca-amppcp state subclass 1
no
transport protein
2022-06-28
2023-03-22
electron microscopy
3.1
N.A.
N.A.
36867705
10.1126/sciadv.add9742
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
QVQLQESGGGLVQAGGSLRLSCAASGSIFGADWMGWYRQAPGKEREFVAGIGHGASTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAVQYTQGWSGQYRSYDSLLYWGQGTQVTVSSGS
N.A.
QVQLQESGGGLVQAGGSLRLSCAASGSIFGADWMGWYRQAPGKEREFVAGIGHGASTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAVQYTQGWSGQYRSYDSLLYWGQGTQVTVSSGS
N.A.
15.103579
0
128
0
123
0
128
0
0
nanobody head piece of megabody
N.A.
vicugna pacos
N.A.
A
protein
calcium-transporting atpase type 2c member 1
homo sapiens
53
14
0.58
H_only
train
7yah_C
7yah
cryoem structure of spca1a in e1-ca-amppcp state subclass 2
no
transport protein
2022-06-28
2023-03-22
electron microscopy
3.12
N.A.
N.A.
36867705
10.1126/sciadv.add9742
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
QVQLQESGGGLVQAGGSLRLSCAASGSIFGADWMGWYRQAPGKEREFVAGIGHGASTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAVQYTQGWSGQYRSYDSLLYWGQGTQVTVSSGS
N.A.
QVQLQESGGGLVQAGGSLRLSCAASGSIFGADWMGWYRQAPGKEREFVAGIGHGASTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAVQYTQGWSGQYRSYDSLLYWGQGTQVTVSSGS
N.A.
15.014887
0
128
0
123
0
128
0
0
the nanobody head piece of megabody.
N.A.
vicugna pacos
N.A.
A
protein
calcium-transporting atpase type 2c member 1
homo sapiens
53
16
0.62
H_only
train
7yai_C
7yai
cryoem structure of spca1a in e1-ca-amppcp state subclass 3
no
transport protein
2022-06-28
2023-03-22
electron microscopy
3.14
N.A.
N.A.
36867705
10.1126/sciadv.add9742
0
auth_asym_id
VHH
IGHV3
N.A.
C
N.A.
QVQLQESGGGLVQAGGSLRLSCAASGSIFGADWMGWYRQAPGKEREFVAGIGHGASTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAVQYTQGWSGQYRSYDSLLYWGQGTQVTVSSGS
N.A.
QVQLQESGGGLVQAGGSLRLSCAASGSIFGADWMGWYRQAPGKEREFVAGIGHGASTYYADSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCAVQYTQGWSGQYRSYDSLLYWGQGTQVTVSSGS
N.A.
15.042033
0
128
0
123
0
128
0
0
nanobody head piece of megabody
N.A.
vicugna pacos
N.A.
A
protein
calcium-transporting atpase type 2c member 1
homo sapiens
49
12
0.55
H_only
train
7yae_S
7yae
octreotide-bound sstr2-gi complex
no
signaling protein
2022-06-28
2023-04-19
electron microscopy
3.37
N.A.
N.A.
36810324
10.1038/s41467-023-36673-z
0
auth_asym_id
scFv
N.A.
N.A.
S
N.A.
DVQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLELKAAAHHHHHHHH
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSSGGGGSGGGGSGGGGSDIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.496344
0
259
0
232
0
246
0
0
scfv16
N.A.
mus musculus
N.A.
A;B
protein;protein
guanine nucleotide-binding protein g(i) subunit alpha-1;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
29;27
17;10
0.89;0.77
H_only
train
8a99_R_O
8a99
sars cov2 spike in 1-up conformation complex with fab47
no
viral protein
2022-06-28
2023-05-10
electron microscopy
2.5
N.A.
N.A.
36574772
10.1016/j.immuni.2022.12.005
0
auth_asym_id
VH:VL
IGHV1
IGKV3
R
O
QVQLVQSGAEVKKPGSSVKVSCKASGGTFNTYAINWVRQAPGQGLEWMGRIIPMFGIANYAQKFQGTVTFTADKSTSTAYMELSSLRYEDTAVYYCARSAYYSESSGYYLDYWGQGTLVTVSS
EIVLTQSPGTLSLSPGERATLSCRASQSVSGSYLAWYQQKPGQAPSLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYVNSPRTFGQGTKLE
VQLVQSGAEVKKPGSSVKVSCKASGGTFNTYAINWVRQAPGQGLEWMGRIIPMFGIANYAQKFQGTVTFTADKSTSTAYMELSSLRYEDTAVYYCARSAYYSESSGYYLDYWGQGTLVTVSS
EIVLTQSPGTLSLSPGERATLSCRASQSVSGSYLAWYQQKPGQAPSLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYVNSPRTFGQGTKLE
14.025078
13.048617
123
106
122
106
122
106
39
fab47 (heavy chain variable domain)
fab47 (light chain variable domain)
homo sapiens
homo sapiens
A
protein
sars-cov2 spike 1-up conformation in complex with fab47
severe acute respiratory syndrome coronavirus 2
45
17
0.77
HL
train
8a99_S_P
8a99
sars cov2 spike in 1-up conformation complex with fab47
no
viral protein
2022-06-28
2023-05-10
electron microscopy
2.5
N.A.
N.A.
36574772
10.1016/j.immuni.2022.12.005
0
auth_asym_id
VH:VL
IGHV1
IGKV3
S
P
QVQLVQSGAEVKKPGSSVKVSCKASGGTFNTYAINWVRQAPGQGLEWMGRIIPMFGIANYAQKFQGTVTFTADKSTSTAYMELSSLRYEDTAVYYCARSAYYSESSGYYLDYWGQGTLVTVSS
EIVLTQSPGTLSLSPGERATLSCRASQSVSGSYLAWYQQKPGQAPSLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYVNSPRTFGQGTKLE
VQLVQSGAEVKKPGSSVKVSCKASGGTFNTYAINWVRQAPGQGLEWMGRIIPMFGIANYAQKFQGTVTFTADKSTSTAYMELSSLRYEDTAVYYCARSAYYSESSGYYLDYWGQGTLVTVSS
EIVLTQSPGTLSLSPGERATLSCRASQSVSGSYLAWYQQKPGQAPSLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYVNSPRTFGQGTKLE
14.014068
12.925644
123
106
122
106
122
106
46
fab47 (heavy chain variable domain)
fab47 (light chain variable domain)
homo sapiens
homo sapiens
B
protein
sars-cov2 spike 1-up conformation in complex with fab47
severe acute respiratory syndrome coronavirus 2
42
18
0.82
HL
train
8a99_T_Q
8a99
sars cov2 spike in 1-up conformation complex with fab47
no
viral protein
2022-06-28
2023-05-10
electron microscopy
2.5
N.A.
N.A.
36574772
10.1016/j.immuni.2022.12.005
0
auth_asym_id
VH:VL
IGHV1
IGKV3
T
Q
QVQLVQSGAEVKKPGSSVKVSCKASGGTFNTYAINWVRQAPGQGLEWMGRIIPMFGIANYAQKFQGTVTFTADKSTSTAYMELSSLRYEDTAVYYCARSAYYSESSGYYLDYWGQGTLVTVSS
EIVLTQSPGTLSLSPGERATLSCRASQSVSGSYLAWYQQKPGQAPSLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYVNSPRTFGQGTKLE
VQLVQSGAEVKKPGSSVKVSCKASGGTFNTYAINWVRQAPGQGLEWMGRIIPMFGIANYAQKFQGTVTFTADKSTSTAYMELSSLRYEDTAVYYCARSAYYSESSGYYLDYWGQGTLVTVSS
EIVLTQSPGTLSLSPGERATLSCRASQSVSGSYLAWYQQKPGQAPSLLIYGASSRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQYVNSPRTFGQGTKLE
14.033859
12.904789
123
106
122
106
122
106
38
fab47 (heavy chain variable domain)
fab47 (light chain variable domain)
homo sapiens
homo sapiens
C
protein
sars-cov2 spike 1-up conformation in complex with fab47
severe acute respiratory syndrome coronavirus 2
40
17
0.77
HL
train
8dim_B_C
8dim
cryoem structure of influenza a virus a/ohio/09/2015 hemagglutinin bound to cr6261 fab
no
viral protein/immune system
2022-06-29
2022-11-16
electron microscopy
2.62
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV1
IGLV1
B
C
MEWSWVFLFFLSVTTGVHSEVQLVESGAEVKKPGSSVKVSCKASGGPFRSYAISWVRQAPGQGPEWMGGIIPIFGTTKYAPKFQGRVTITADDFAGTVYMELSSLRSEDTAMYYCAKHMGYQVRETMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKHHHHHH
MEWSWVFLFFLSVTTGVHSQSVLTQPPSVSAAPGQKVTISCSGSSSNIGNDYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEANYYCATWDRRPTAYVVFGGGTKLTVLGAAAGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
VQLVESGAEVKKPGSSVKVSCKASGGPFRSYAISWVRQAPGQGPEWMGGIIPIFGTTKYAPKFQGRVTITADDFAGTVYMELSSLRSEDTAMYYCAKHMGYQVRETMDVWGKGTTVTV
VLTQPPSVSAAPGQKVTISCSGSSSNIGNDYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEANYYCATWDRRPTAYVVFGGGTKLTVL
13.737284
13.673967
251
240
118
109
118
109
44
cr6261 fab heavy chain
cr6261 fab light chain
homo sapiens
homo sapiens
A
protein
hemagglutinin
influenza a virus
40
12
0.86
HL
train
8dim_E_F
8dim
cryoem structure of influenza a virus a/ohio/09/2015 hemagglutinin bound to cr6261 fab
no
viral protein/immune system
2022-06-29
2022-11-16
electron microscopy
2.62
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV1
IGLV1
E
F
MEWSWVFLFFLSVTTGVHSEVQLVESGAEVKKPGSSVKVSCKASGGPFRSYAISWVRQAPGQGPEWMGGIIPIFGTTKYAPKFQGRVTITADDFAGTVYMELSSLRSEDTAMYYCAKHMGYQVRETMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKHHHHHH
MEWSWVFLFFLSVTTGVHSQSVLTQPPSVSAAPGQKVTISCSGSSSNIGNDYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEANYYCATWDRRPTAYVVFGGGTKLTVLGAAAGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
VQLVESGAEVKKPGSSVKVSCKASGGPFRSYAISWVRQAPGQGPEWMGGIIPIFGTTKYAPKFQGRVTITADDFAGTVYMELSSLRSEDTAMYYCAKHMGYQVRETMDVWGKGTTVTV
VLTQPPSVSAAPGQKVTISCSGSSSNIGNDYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEANYYCATWDRRPTAYVVFGGGTKLTVL
13.727774
13.684639
251
240
118
109
118
109
45
cr6261 fab heavy chain
cr6261 fab light chain
homo sapiens
homo sapiens
D
protein
hemagglutinin
influenza a virus
42
13
0.81
HL
train
8dim_H_I
8dim
cryoem structure of influenza a virus a/ohio/09/2015 hemagglutinin bound to cr6261 fab
no
viral protein/immune system
2022-06-29
2022-11-16
electron microscopy
2.62
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV1
IGLV1
H
I
MEWSWVFLFFLSVTTGVHSEVQLVESGAEVKKPGSSVKVSCKASGGPFRSYAISWVRQAPGQGPEWMGGIIPIFGTTKYAPKFQGRVTITADDFAGTVYMELSSLRSEDTAMYYCAKHMGYQVRETMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKHHHHHH
MEWSWVFLFFLSVTTGVHSQSVLTQPPSVSAAPGQKVTISCSGSSSNIGNDYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEANYYCATWDRRPTAYVVFGGGTKLTVLGAAAGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
VQLVESGAEVKKPGSSVKVSCKASGGPFRSYAISWVRQAPGQGPEWMGGIIPIFGTTKYAPKFQGRVTITADDFAGTVYMELSSLRSEDTAMYYCAKHMGYQVRETMDVWGKGTTVTV
VLTQPPSVSAAPGQKVTISCSGSSSNIGNDYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEANYYCATWDRRPTAYVVFGGGTKLTVL
13.735518
13.677499
251
240
118
109
118
109
44
cr6261 fab heavy chain
cr6261 fab light chain
homo sapiens
homo sapiens
G
protein
hemagglutinin
influenza a virus
40
13
0.87
HL
train
8diu_H_I
8diu
cryo-em structure of influenza a virus a/bayern/7/1995 hemagglutinin bound to cr6261 fab
no
viral protein/immune system
2022-06-29
2022-12-14
electron microscopy
2.61
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV1
IGLV1
H
I
MEWSWVFLFFLSVTTGVHSEVQLVESGAEVKKPGSSVKVSCKASGGPFRSYAISWVRQAPGQGPEWMGGIIPIFGTTKYAPKFQGRVTITADDFAGTVYMELSSLRSEDTAMYYCAKHMGYQVRETMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKHHHHHH
MEWSWVFLFFLSVTTGVHSQSVLTQPPSVSAAPGQKVTISCSGSSSNIGNDYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEANYYCATWDRRPTAYVVFGGGTKLTVLGAAAGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
VQLVESGAEVKKPGSSVKVSCKASGGPFRSYAISWVRQAPGQGPEWMGGIIPIFGTTKYAPKFQGRVTITADDFAGTVYMELSSLRSEDTAMYYCAKHMGYQVRETMDVWGKGTTVTVS
VLTQPPSVSAAPGQKVTISCSGSSSNIGNDYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEANYYCATWDRRPTAYVVFGGGTKLTVL
13.849444
13.676078
251
240
119
109
119
109
43
cr6261 fab heavy chain
cr6261 fab light chain
homo sapiens
homo sapiens
A
protein
hemagglutinin
influenza a virus
37
11
0.79
HL
train
8diu_E_F
8diu
cryo-em structure of influenza a virus a/bayern/7/1995 hemagglutinin bound to cr6261 fab
no
viral protein/immune system
2022-06-29
2022-12-14
electron microscopy
2.61
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV1
IGLV1
E
F
MEWSWVFLFFLSVTTGVHSEVQLVESGAEVKKPGSSVKVSCKASGGPFRSYAISWVRQAPGQGPEWMGGIIPIFGTTKYAPKFQGRVTITADDFAGTVYMELSSLRSEDTAMYYCAKHMGYQVRETMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKHHHHHH
MEWSWVFLFFLSVTTGVHSQSVLTQPPSVSAAPGQKVTISCSGSSSNIGNDYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEANYYCATWDRRPTAYVVFGGGTKLTVLGAAAGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
VQLVESGAEVKKPGSSVKVSCKASGGPFRSYAISWVRQAPGQGPEWMGGIIPIFGTTKYAPKFQGRVTITADDFAGTVYMELSSLRSEDTAMYYCAKHMGYQVRETMDVWGKGTTVTVS
VLTQPPSVSAAPGQKVTISCSGSSSNIGNDYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEANYYCATWDRRPTAYVVFGGGTKLTVL
13.848597
13.689712
251
240
119
109
119
109
44
cr6261 fab heavy chain
cr6261 fab light chain
homo sapiens
homo sapiens
B
protein
hemagglutinin
influenza a virus
38
12
0.8
HL
train
8diu_G_C
8diu
cryo-em structure of influenza a virus a/bayern/7/1995 hemagglutinin bound to cr6261 fab
no
viral protein/immune system
2022-06-29
2022-12-14
electron microscopy
2.61
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV1
IGLV1
G
C
MEWSWVFLFFLSVTTGVHSEVQLVESGAEVKKPGSSVKVSCKASGGPFRSYAISWVRQAPGQGPEWMGGIIPIFGTTKYAPKFQGRVTITADDFAGTVYMELSSLRSEDTAMYYCAKHMGYQVRETMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKHHHHHH
MEWSWVFLFFLSVTTGVHSQSVLTQPPSVSAAPGQKVTISCSGSSSNIGNDYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEANYYCATWDRRPTAYVVFGGGTKLTVLGAAAGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
VQLVESGAEVKKPGSSVKVSCKASGGPFRSYAISWVRQAPGQGPEWMGGIIPIFGTTKYAPKFQGRVTITADDFAGTVYMELSSLRSEDTAMYYCAKHMGYQVRETMDVWGKGTTVTVS
VLTQPPSVSAAPGQKVTISCSGSSSNIGNDYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEANYYCATWDRRPTAYVVFGGGTKLTVL
13.847316
13.675163
251
240
119
109
119
109
44
cr6261 fab heavy chain
cr6261 fab light chain
homo sapiens
homo sapiens
D
protein
hemagglutinin
influenza a virus
37
11
0.79
HL
train
8dis_H_L
8dis
cryoem structure of influenza a virus a/melbourne/1/1946 (h1n1) hemagglutinin bound to cr6261 fab
no
viral protein/immune system
2022-06-29
2023-06-07
electron microscopy
2.62
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV1
IGLV1
H
L
MEWSWVFLFFLSVTTGVHSEVQLVESGAEVKKPGSSVKVSCKASGGPFRSYAISWVRQAPGQGPEWMGGIIPIFGTTKYAPKFQGRVTITADDFAGTVYMELSSLRSEDTAMYYCAKHMGYQVRETMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKHHHHHH
MEWSWVFLFFLSVTTGVHSQSVLTQPPSVSAAPGQKVTISCSGSSSNIGNDYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEANYYCATWDRRPTAYVVFGGGTKLTVLGAAAGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
VQLVESGAEVKKPGSSVKVSCKASGGPFRSYAISWVRQAPGQGPEWMGGIIPIFGTTKYAPKFQGRVTITADDFAGTVYMELSSLRSEDTAMYYCAKHMGYQVRETMDVWGKGTTVTVS
VLTQPPSVSAAPGQKVTISCSGSSSNIGNDYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEANYYCATWDRRPTAYVVFGGGTKLTVL
13.846796
13.84669
251
240
119
109
119
109
44
cr6261 fab heavy chain
cr6261 fab light chain
homo sapiens
homo sapiens
d
protein
hemagglutinin ha2 chain
influenza a virus
29
12
0.92
HL
train
8dis_A_C
8dis
cryoem structure of influenza a virus a/melbourne/1/1946 (h1n1) hemagglutinin bound to cr6261 fab
no
viral protein/immune system
2022-06-29
2023-06-07
electron microscopy
2.62
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV1
IGLV1
A
C
MEWSWVFLFFLSVTTGVHSEVQLVESGAEVKKPGSSVKVSCKASGGPFRSYAISWVRQAPGQGPEWMGGIIPIFGTTKYAPKFQGRVTITADDFAGTVYMELSSLRSEDTAMYYCAKHMGYQVRETMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKHHHHHH
MEWSWVFLFFLSVTTGVHSQSVLTQPPSVSAAPGQKVTISCSGSSSNIGNDYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEANYYCATWDRRPTAYVVFGGGTKLTVLGAAAGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
VQLVESGAEVKKPGSSVKVSCKASGGPFRSYAISWVRQAPGQGPEWMGGIIPIFGTTKYAPKFQGRVTITADDFAGTVYMELSSLRSEDTAMYYCAKHMGYQVRETMDVWGKGTTVTVS
VLTQPPSVSAAPGQKVTISCSGSSSNIGNDYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEANYYCATWDRRPTAYVVFGGGTKLTVL
13.844747
13.835955
251
240
119
109
119
109
44
cr6261 fab heavy chain
cr6261 fab light chain
homo sapiens
homo sapiens
e
protein
hemagglutinin ha2 chain
influenza a virus
27
12
0.92
HL
train
8dis_B_G
8dis
cryoem structure of influenza a virus a/melbourne/1/1946 (h1n1) hemagglutinin bound to cr6261 fab
no
viral protein/immune system
2022-06-29
2023-06-07
electron microscopy
2.62
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV1
IGLV1
B
G
MEWSWVFLFFLSVTTGVHSEVQLVESGAEVKKPGSSVKVSCKASGGPFRSYAISWVRQAPGQGPEWMGGIIPIFGTTKYAPKFQGRVTITADDFAGTVYMELSSLRSEDTAMYYCAKHMGYQVRETMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKHHHHHH
MEWSWVFLFFLSVTTGVHSQSVLTQPPSVSAAPGQKVTISCSGSSSNIGNDYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEANYYCATWDRRPTAYVVFGGGTKLTVLGAAAGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
VQLVESGAEVKKPGSSVKVSCKASGGPFRSYAISWVRQAPGQGPEWMGGIIPIFGTTKYAPKFQGRVTITADDFAGTVYMELSSLRSEDTAMYYCAKHMGYQVRETMDVWGKGTTVTVS
VLTQPPSVSAAPGQKVTISCSGSSSNIGNDYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEANYYCATWDRRPTAYVVFGGGTKLTVL
13.8483
13.865586
251
240
119
109
119
109
40
cr6261 fab heavy chain
cr6261 fab light chain
homo sapiens
homo sapiens
f
protein
hemagglutinin ha2 chain
influenza a virus
28
13
0.93
HL
train
8djk_H_L
8djk
hmgcr-ubiad1 complex state 2
no
oxidoreductase/immune system
2022-06-30
2022-08-03
electron microscopy
3.33
N.A.
N.A.
35879350
10.1038/s41467-022-32025-5
0
auth_asym_id
VH:VL
IGHV1
IGKV6
H
L
EVQLQQSGPELVKPGASVKMSCKASGYSFTGYFMNWVKQSHGKSLEWIGRINPYNGDTFYNQKFKGKATLTVDKSSRTAHMELRSLTSADSALYFCVRRGEDYGSSYNYWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
DILLTQSPAILSVSPGERVSFSCRASQSIGTSIHWYQQRTNGSPRLVIKYASESISGIPSRFSGSGSGTDFTLSINSVESEDIADYYCQQSNSWPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLQQSGPELVKPGASVKMSCKASGYSFTGYFMNWVKQSHGKSLEWIGRINPYNGDTFYNQKFKGKATLTVDKSSRTAHMELRSLTSADSALYFCVRRGEDYGSSYNYWGQGTTVTV
DILLTQSPAILSVSPGERVSFSCRASQSIGTSIHWYQQRTNGSPRLVIKYASESISGIPSRFSGSGSGTDFTLSINSVESEDIADYYCQQSNSWPYTFGGGTKLEI
13.957171
13.192306
232
214
118
106
118
106
41
fab 15b2 heavy chain
fab 15b2 light chain
mus musculus
mus musculus
B
protein
ubia prenyltransferase domain-containing protein 1
cricetulus griseus
49
24
0.8
HL
train
8djm_H_L
8djm
hmgcr-ubiad1 complex state 1
no
oxidoreductase/immune system
2022-07-01
2022-08-03
electron microscopy
3.23
N.A.
N.A.
35879350
10.1038/s41467-022-32025-5
0
auth_asym_id
VH:VL
IGHV1
IGKV6
H
L
EVQLQQSGPELVKPGASVKMSCKASGYSFTGYFMNWVKQSHGKSLEWIGRINPYNGDTFYNQKFKGKATLTVDKSSRTAHMELRSLTSADSALYFCVRRGEDYGSSYNYWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
DILLTQSPAILSVSPGERVSFSCRASQSIGTSIHWYQQRTNGSPRLVIKYASESISGIPSRFSGSGSGTDFTLSINSVESEDIADYYCQQSNSWPYTFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLQQSGPELVKPGASVKMSCKASGYSFTGYFMNWVKQSHGKSLEWIGRINPYNGDTFYNQKFKGKATLTVDKSSRTAHMELRSLTSADSALYFCVRRGEDYGSSYNYWGQGTTVTV
DILLTQSPAILSVSPGERVSFSCRASQSIGTSIHWYQQRTNGSPRLVIKYASESISGIPSRFSGSGSGTDFTLSINSVESEDIADYYCQQSNSWPYTFGGGTKLEI
13.933846
13.235607
232
214
118
106
118
106
40
fab 15b2 heavy chain
fab 15b2 light chain
mus musculus
mus musculus
B
protein
ubia prenyltransferase domain-containing protein 1
cricetulus griseus
48
24
0.86
HL
train
7yck_C_D
7yck
crystal structure of sars-cov-2 spike rbd in complex with fp-12a fab
no
viral protein/immune system
2022-07-01
2023-02-01
x-ray diffraction
2.6
0.264
0.229
36658148
10.1038/s41467-023-35949-8
0
auth_asym_id
FabH:FabL
IGHV3
IGLV6
C
D
EVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCANGFGEYYYYAMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
NFMLTQPHSVSESPGKTVTISCTGSSGSIASNYVQWYQRRPGSAPTTVIYEDNQRPSGVPDRFSASIDSSSNSASLTISGLKTEDEADYYCQSYDSSNWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
EVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCANGFGEYYYYAMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEP
NFMLTQPHSVSESPGKTVTISCTGSSGSIASNYVQWYQRRPGSAPTTVIYEDNQRPSGVPDRFSASIDSSSNSASLTISGLKTEDEADYYCQSYDSSNWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
24.895905
20.330732
224
216
217
210
221
213
94
fp-12a fab heavy chain
fp-12a fab light chain
homo sapiens
homo sapiens
A
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
43
20
0.91
HL
train
7yck_E_F
7yck
crystal structure of sars-cov-2 spike rbd in complex with fp-12a fab
no
viral protein/immune system
2022-07-01
2023-02-01
x-ray diffraction
2.6
0.264
0.229
36658148
10.1038/s41467-023-35949-8
0
auth_asym_id
VH:VL
IGHV3
IGLV6
E
F
EVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCANGFGEYYYYAMDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
NFMLTQPHSVSESPGKTVTISCTGSSGSIASNYVQWYQRRPGSAPTTVIYEDNQRPSGVPDRFSASIDSSSNSASLTISGLKTEDEADYYCQSYDSSNWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECS
EVQLVESGGGVVQPGRSLRLSCAASGFTFSSYGMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCANGFGEYYYYAMDVWGQGTTVTVS
NFMLTQPHSVSESPGKTVTISCTGSSGSIASNYVQWYQRRPGSAPTTVIYEDNQRPSGVPDRFSASIDSSSNSASLTISGLKTEDEADYYCQSYDSSNWVFGGGTKLTV
13.594678
13.178788
224
216
120
109
120
109
44
fp-12a fab heavy chain
fp-12a fab light chain
homo sapiens
homo sapiens
B
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
52
23
0.82
HL
train
7ycl_H_L
7ycl
crystal structure of sars-cov-2 spike rbd in complex with is-9a fab
no
viral protein/immune system
2022-07-01
2023-02-01
x-ray diffraction
2.13
0.217
0.173
36658148
10.1038/s41467-023-35949-8
0
auth_asym_id
FabH:FabL
IGHV5
IGKV1
H
L
QVQLVQSGAEVKKPGESLRISCKGSGYSFTNYWISWVRQMPGKGLEWMGRIDPSDSYINYSPSFQGHATISADKSISTAYLQWGSLKASDTAMYYCARGRNYLDSRGRFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
DIVMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKSGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDSLGFTFGPGTKVEIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVQSGAEVKKPGESLRISCKGSGYSFTNYWISWVRQMPGKGLEWMGRIDPSDSYINYSPSFQGHATISADKSISTAYLQWGSLKASDTAMYYCARGRNYLDSRGRFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
DIVMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKSGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDSLGFTFGPGTKVEIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
21.016893
23.68621
225
214
217
214
224
214
100
is-9a fab heavy chain
is-9a fab light chain
homo sapiens
homo sapiens
D
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
42
17
0.89
HL
train
7ycl_A_B
7ycl
crystal structure of sars-cov-2 spike rbd in complex with is-9a fab
no
viral protein/immune system
2022-07-01
2023-02-01
x-ray diffraction
2.13
0.217
0.173
36658148
10.1038/s41467-023-35949-8
0
auth_asym_id
FabH:FabL
IGHV5
IGKV1
A
B
QVQLVQSGAEVKKPGESLRISCKGSGYSFTNYWISWVRQMPGKGLEWMGRIDPSDSYINYSPSFQGHATISADKSISTAYLQWGSLKASDTAMYYCARGRNYLDSRGRFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
DIVMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKSGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDSLGFTFGPGTKVEIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
QVQLVQSGAEVKKPGESLRISCKGSGYSFTNYWISWVRQMPGKGLEWMGRIDPSDSYINYSPSFQGHATISADKSISTAYLQWGSLKASDTAMYYCARGRNYLDSRGRFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
DIVMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKSGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPEDIATYYCQQYDSLGFTFGPGTKVEIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
21.264296
23.517246
225
214
220
213
224
213
95
is-9a fab heavy chain
is-9a fab light chain
homo sapiens
homo sapiens
R
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
43
19
0.9
HL
train
7ycn_E_F
7ycn
crystal structure of sars-cov-2 spike rbd in complex with iy-2a fab
no
viral protein/immune system
2022-07-01
2023-02-01
x-ray diffraction
2.85
0.25
0.211
36658148
10.1038/s41467-023-35949-8
0
auth_asym_id
FabH:FabL
IGHV4
IGLV6
E
F
QVQLVEWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGLINHSGSTNYNPSLKSRVTISLDTSKNQFSLKLTSVTAADTAVYYCARGLGIFGVVTLSDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH
ANFMLTQPHSVSESPGKTVTISCTGSSGSIASNYVQWYQQRPGSAPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLRTEDEADYYCQSYDSGIWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC
QVQLVEWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGLINHSGSTNYNPSLKSRVTISLDTSKNQFSLKLTSVTAADTAVYYCARGLGIFGVVTLSDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
NFMLTQPHSVSESPGKTVTISCTGSSGSIASNYVQWYQQRPGSAPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLRTEDEADYYCQSYDSGIWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC
24.677584
20.796236
228
216
220
215
223
215
92
iy-2a fab heavy chain
iy-2a fab light chain
homo sapiens
homo sapiens
A
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
53
20
0.77
HL
train
7ycn_C_D
7ycn
crystal structure of sars-cov-2 spike rbd in complex with iy-2a fab
no
viral protein/immune system
2022-07-01
2023-02-01
x-ray diffraction
2.85
0.25
0.211
36658148
10.1038/s41467-023-35949-8
0
auth_asym_id
FabH:FabL
IGHV4
IGLV6
C
D
QVQLVEWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGLINHSGSTNYNPSLKSRVTISLDTSKNQFSLKLTSVTAADTAVYYCARGLGIFGVVTLSDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH
ANFMLTQPHSVSESPGKTVTISCTGSSGSIASNYVQWYQQRPGSAPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLRTEDEADYYCQSYDSGIWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC
QVQLVEWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGLINHSGSTNYNPSLKSRVTISLDTSKNQFSLKLTSVTAADTAVYYCARGLGIFGVVTLSDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
NFMLTQPHSVSESPGKTVTISCTGSSGSIASNYVQWYQQRPGSAPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLRTEDEADYYCQSYDSGIWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP
24.6731
20.488878
228
216
223
212
223
212
91
iy-2a fab heavy chain
iy-2a fab light chain
homo sapiens
homo sapiens
B
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
52
19
0.76
HL
train
7ycn_H_I
7ycn
crystal structure of sars-cov-2 spike rbd in complex with iy-2a fab
no
viral protein/immune system
2022-07-01
2023-02-01
x-ray diffraction
2.85
0.25
0.211
36658148
10.1038/s41467-023-35949-8
0
auth_asym_id
FabH:FabL
IGHV4
IGLV6
H
I
QVQLVEWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGLINHSGSTNYNPSLKSRVTISLDTSKNQFSLKLTSVTAADTAVYYCARGLGIFGVVTLSDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH
ANFMLTQPHSVSESPGKTVTISCTGSSGSIASNYVQWYQQRPGSAPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLRTEDEADYYCQSYDSGIWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC
QVQLVEWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGLINHSGSTNYNPSLKSRVTISLDTSKNQFSLKLTSVTAADTAVYYCARGLGIFGVVTLSDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
NFMLTQPHSVSESPGKTVTISCTGSSGSIASNYVQWYQQRPGSAPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLRTEDEADYYCQSYDSGIWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
24.54269
20.560907
228
216
221
213
223
213
93
iy-2a fab heavy chain
iy-2a fab light chain
homo sapiens
homo sapiens
G
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
53
20
0.74
HL
train
7ycn_K_L
7ycn
crystal structure of sars-cov-2 spike rbd in complex with iy-2a fab
no
viral protein/immune system
2022-07-01
2023-02-01
x-ray diffraction
2.85
0.25
0.211
36658148
10.1038/s41467-023-35949-8
0
auth_asym_id
FabH:FabL
IGHV4
IGLV6
K
L
QVQLVEWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGLINHSGSTNYNPSLKSRVTISLDTSKNQFSLKLTSVTAADTAVYYCARGLGIFGVVTLSDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH
ANFMLTQPHSVSESPGKTVTISCTGSSGSIASNYVQWYQQRPGSAPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLRTEDEADYYCQSYDSGIWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTEC
QVQLVEWGAGLLKPSETLSLTCAVYGGSFSGYYWSWIRQPPGKGLEWIGLINHSGSTNYNPSLKSRVTISLDTSKNQFSLKLTSVTAADTAVYYCARGLGIFGVVTLSDVWGQGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
NFMLTQPHSVSESPGKTVTISCTGSSGSIASNYVQWYQQRPGSAPTTVIYEDNQRPSGVPDRFSGSIDSSSNSASLTISGLRTEDEADYYCQSYDSGIWVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAP
24.542328
20.466349
228
216
219
212
222
212
89
iy-2a fab heavy chain
iy-2a fab light chain
homo sapiens
homo sapiens
J
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
51
19
0.79
HL
train
8dk5_N
8dk5
structure of 187bp lin28b nucleosome with site 0 mutation
no
transcription/dna
2022-07-02
2023-06-28
electron microscopy
2.71
N.A.
N.A.
37327775
10.1016/j.molcel.2023.05.030
0
auth_asym_id
scFv
N.A.
N.A.
N
N.A.
MKSSHHHHHHENLYFQSNAMEVQLQQSGPELVEPGTSVKMPCKASGYTFTSYTIQWVKQTPRQGLEWIGYIYPYNAGTKYNEKFKGKATLTSDKSSSTVYMELSSLTSEDSAVYYCARKSSRLRSTLDYWGQGTSVTVSSGGGGSGGGGSGGGGSMDIKMTQSPSSMHASLGERVTITCKASQDIRSYLSWYQQKPWKSPKTLIYYATSLADGVPSRFSGSGSGQDFSLTINNLESDDTATYYCLQHGESPYTFGSGTKLEIKRA
N.A.
EVQLQQSGPELVEPGTSVKMPCKASGYTFTSYTIQWVKQTPRQGLEWIGYIYPYNAGTKYNEKFKGKATLTSDKSSSTVYMELSSLTSEDSAVYYCARKSSRLRSTLDYWGQGTSVTVSSGGGGSGGGGSGGGGSMDIKMTQSPSSMHASLGERVTITCKASQDIRSYLSWYQQKPWKSPKTLIYYATSLADGVPSRFSGSGSGQDFSLTINNLESDDTATYYCLQHGESPYTFGSGTKLEIK
N.A.
17.363056
0
265
0
226
0
243
0
0
single-chain variable fragment
N.A.
mus musculus
N.A.
C;D
protein;protein
histone h2a type 2-c;histone h2b type 2-e
homo sapiens;homo sapiens
27;20
12;9
1.0;0.82
H_only
train
8dk5_K
8dk5
structure of 187bp lin28b nucleosome with site 0 mutation
no
transcription/dna
2022-07-02
2023-06-28
electron microscopy
2.71
N.A.
N.A.
37327775
10.1016/j.molcel.2023.05.030
0
auth_asym_id
scFv
N.A.
N.A.
K
N.A.
MKSSHHHHHHENLYFQSNAMEVQLQQSGPELVEPGTSVKMPCKASGYTFTSYTIQWVKQTPRQGLEWIGYIYPYNAGTKYNEKFKGKATLTSDKSSSTVYMELSSLTSEDSAVYYCARKSSRLRSTLDYWGQGTSVTVSSGGGGSGGGGSGGGGSMDIKMTQSPSSMHASLGERVTITCKASQDIRSYLSWYQQKPWKSPKTLIYYATSLADGVPSRFSGSGSGQDFSLTINNLESDDTATYYCLQHGESPYTFGSGTKLEIKRA
N.A.
EVQLQQSGPELVEPGTSVKMPCKASGYTFTSYTIQWVKQTPRQGLEWIGYIYPYNAGTKYNEKFKGKATLTSDKSSSTVYMELSSLTSEDSAVYYCARKSSRLRSTLDYWGQGTSVTVSSGGGGSGGGGSGGGGSMDIKMTQSPSSMHASLGERVTITCKASQDIRSYLSWYQQKPWKSPKTLIYYATSLADGVPSRFSGSGSGQDFSLTINNLESDDTATYYCLQHGESPYTFGSGTKLEIK
N.A.
17.382055
0
265
0
226
0
243
0
0
single-chain variable fragment
N.A.
mus musculus
N.A.
G;H
protein;protein
histone h2a type 2-c;histone h2b type 2-e
homo sapiens;homo sapiens
29;20
14;10
1.0;0.91
H_only
train
7yd1_A_B
7yd1
local refinement of sars-cov-2 omicron s trimer complexed with xg005
yes
viral protein
2022-07-02
2023-07-12
electron microscopy
2.99
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV2
IGLV2
A
B
QVTLRESGPTLVKPKQTLTLTCTFSGFSLSTPGGGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSSLTITKDTSKNQVVLTMTNMDPVDTATYYCARLTAADTIFDCWGQGTLVTVSSAS
ALTQPASVSGSPGLSITISCTATSSDVGAYNYVSWYQQHPGQAPKLMIYDVSKRPSGVSNRFSGSKSANTASLTISGLQAEDEADYYCSSYTTTSVVFGGGTKLTVLG
QVTLRESGPTLVKPKQTLTLTCTFSGFSLSTPGGGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSSLTITKDTSKNQVVLTMTNMDPVDTATYYCARLTAADTIFDCWGQGTLVTVSSAS
ALTQPASVSGSPGLSITISCTATSSDVGAYNYVSWYQQHPGQAPKLMIYDVSKRPSGVSNRFSGSKSANTASLTISGLQAEDEADYYCSSYTTTSVVFGGGTKLTVLG
13.937686
13.259558
122
108
122
108
122
108
44
xg005-vh
xg005-vl
homo sapiens
homo sapiens
C
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
47
24
0.89
HL
train
7ycy_F_G
7ycy
sars-cov-2 omicron 1-rbd up spike trimer complexed with three xg005 molecules
yes
viral protein
2022-07-02
2023-12-13
electron microscopy
3.74
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV2
IGLV2
F
G
QVTLRESGPTLVKPKQTLTLTCTFSGFSLSTPGGGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSSLTITKDTSKNQVVLTMTNMDPVDTATYYCARLTAADTIFDCWGQGTLVTVSS
QSALTQPASVSGSPGLSITISCTATSSDVGAYNYVSWYQQHPGQAPKLMIYDVSKRPSGVSNRFSGSKSANTASLTISGLQAEDEADYYCSSYTTTSVVFGGGTKLTVLG
QVTLRESGPTLVKPKQTLTLTCTFSGFSLSTPGGGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSSLTITKDTSKNQVVLTMTNMDPVDTATYYCARLTAADTIFDCWGQGTLVTVS
ALTQPASVSGSPGLSITISCTATSSDVGAYNYVSWYQQHPGQAPKLMIYDVSKRPSGVSNRFSGSKSANTASLTISGLQAEDEADYYCSSYTTTSVVFGGGTKLTVLG
13.704998
13.29544
120
110
119
108
119
108
45
xg005-vh
xg005-vl
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus
46
22
0.81
HL
train
7ycy_H_I
7ycy
sars-cov-2 omicron 1-rbd up spike trimer complexed with three xg005 molecules
yes
viral protein
2022-07-02
2023-12-13
electron microscopy
3.74
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV2
IGLV2
H
I
QVTLRESGPTLVKPKQTLTLTCTFSGFSLSTPGGGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSSLTITKDTSKNQVVLTMTNMDPVDTATYYCARLTAADTIFDCWGQGTLVTVSS
QSALTQPASVSGSPGLSITISCTATSSDVGAYNYVSWYQQHPGQAPKLMIYDVSKRPSGVSNRFSGSKSANTASLTISGLQAEDEADYYCSSYTTTSVVFGGGTKLTVLG
QVTLRESGPTLVKPKQTLTLTCTFSGFSLSTPGGGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSSLTITKDTSKNQVVLTMTNMDPVDTATYYCARLTAADTIFDCWGQGTLVTVS
ALTQPASVSGSPGLSITISCTATSSDVGAYNYVSWYQQHPGQAPKLMIYDVSKRPSGVSNRFSGSKSANTASLTISGLQAEDEADYYCSSYTTTSVVFGGGTKLTVLG
13.700237
13.2802
120
110
119
108
119
108
45
xg005-vh
xg005-vl
homo sapiens
homo sapiens
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus
45
22
0.85
HL
train
7ycy_D_E
7ycy
sars-cov-2 omicron 1-rbd up spike trimer complexed with three xg005 molecules
yes
viral protein
2022-07-02
2023-12-13
electron microscopy
3.74
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV2
IGLV2
D
E
QVTLRESGPTLVKPKQTLTLTCTFSGFSLSTPGGGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSSLTITKDTSKNQVVLTMTNMDPVDTATYYCARLTAADTIFDCWGQGTLVTVSS
QSALTQPASVSGSPGLSITISCTATSSDVGAYNYVSWYQQHPGQAPKLMIYDVSKRPSGVSNRFSGSKSANTASLTISGLQAEDEADYYCSSYTTTSVVFGGGTKLTVLG
QVTLRESGPTLVKPKQTLTLTCTFSGFSLSTPGGGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSSLTITKDTSKNQVVLTMTNMDPVDTATYYCARLTAADTIFDCWGQGTLVTVS
ALTQPASVSGSPGLSITISCTATSSDVGAYNYVSWYQQHPGQAPKLMIYDVSKRPSGVSNRFSGSKSANTASLTISGLQAEDEADYYCSSYTTTSVVFGGGTKLTVLG
13.704382
13.307135
120
110
119
108
119
108
49
xg005-vh
xg005-vl
homo sapiens
homo sapiens
C
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus
37
20
0.91
HL
train
7ycz_F_G
7ycz
sars-cov-2 omicron 2-rbd up spike trimer complexed with three xg005 molecules
yes
viral protein
2022-07-02
2023-12-13
electron microscopy
3.24
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV2
IGLV2
F
G
QVTLRESGPTLVKPKQTLTLTCTFSGFSLSTPGGGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSSLTITKDTSKNQVVLTMTNMDPVDTATYYCARLTAADTIFDCWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
QSALTQPASVSGSPGLSITISCTATSSDVGAYNYVSWYQQHPGQAPKLMIYDVSKRPSGVSNRFSGSKSANTASLTISGLQAEDEADYYCSSYTTTSVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTV
QVTLRESGPTLVKPKQTLTLTCTFSGFSLSTPGGGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSSLTITKDTSKNQVVLTMTNMDPVDTATYYCARLTAADTIFDCWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
ALTQPASVSGSPGLSITISCTATSSDVGAYNYVSWYQQHPGQAPKLMIYDVSKRPSGVSNRFSGSKSANTASLTISGLQAEDEADYYCSSYTTTSVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTV
21.274862
23.4193
223
205
223
203
223
203
97
xg005-vh
xg005-vl
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus
45
22
0.85
HL
train
7ycz_H_I
7ycz
sars-cov-2 omicron 2-rbd up spike trimer complexed with three xg005 molecules
yes
viral protein
2022-07-02
2023-12-13
electron microscopy
3.24
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
VH:VL
IGHV2
IGLV2
H
I
QVTLRESGPTLVKPKQTLTLTCTFSGFSLSTPGGGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSSLTITKDTSKNQVVLTMTNMDPVDTATYYCARLTAADTIFDCWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
QSALTQPASVSGSPGLSITISCTATSSDVGAYNYVSWYQQHPGQAPKLMIYDVSKRPSGVSNRFSGSKSANTASLTISGLQAEDEADYYCSSYTTTSVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTV
QVTLRESGPTLVKPKQTLTLTCTFSGFSLSTPGGGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSSLTITKDTSKNQVVLTMTNMDPVDTATYYCARLTAADTIFDCWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
ALTQPASVSGSPGLSITISCTATSSDVGAYNYVSWYQQHPGQAPKLMIYDVSKRPSGVSNRFSGSKSANTASLTISGLQAEDEADYYCSSYTTTSVVFGGGTKLTVL
14.392083
13.231602
223
205
121
107
223
107
45
xg005-vh
xg005-vl
homo sapiens
homo sapiens
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus
46
22
0.81
HL
train
7ycz_D_E
7ycz
sars-cov-2 omicron 2-rbd up spike trimer complexed with three xg005 molecules
yes
viral protein
2022-07-02
2023-12-13
electron microscopy
3.24
N.A.
N.A.
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV2
IGLV2
D
E
QVTLRESGPTLVKPKQTLTLTCTFSGFSLSTPGGGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSSLTITKDTSKNQVVLTMTNMDPVDTATYYCARLTAADTIFDCWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
QSALTQPASVSGSPGLSITISCTATSSDVGAYNYVSWYQQHPGQAPKLMIYDVSKRPSGVSNRFSGSKSANTASLTISGLQAEDEADYYCSSYTTTSVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTV
QVTLRESGPTLVKPKQTLTLTCTFSGFSLSTPGGGVGWIRQPPGKALEWLALIYWDDDKRYSPSLKSSLTITKDTSKNQVVLTMTNMDPVDTATYYCARLTAADTIFDCWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSC
ALTQPASVSGSPGLSITISCTATSSDVGAYNYVSWYQQHPGQAPKLMIYDVSKRPSGVSNRFSGSKSANTASLTISGLQAEDEADYYCSSYTTTSVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTV
21.279682
23.430141
223
205
223
203
223
203
97
xg005-vh
xg005-vl
homo sapiens
homo sapiens
C
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus
46
21
0.78
HL
train
8dk6_H_L
8dk6
structure of hepatitis c virus envelope n-terminal truncated glycoprotein 2 (e2) (residues 456-713) from j6 genotype
no
viral protein
2022-07-03
2023-03-29
x-ray diffraction
2.45
0.232
0.203
36702826
10.1038/s41467-023-36183-y
0
auth_asym_id
FabH:FabL
IGHV1
IGKV4
H
L
EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYIHWVNQRPEQGLEWIGRIDPANGHTQYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCATSDYSYALDSWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRGPT
DIVMTQSPSSLAMSVGQKVTMSCKSSQSLLNSNNQKNYLAWYQQKPGQSPKLLVYFASTRESGVPDRFIGSGSGTDFTLTISSVQAEDLADYFCQQHYSTPYTFGGGTKLEIRRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNEC
EVQLQQSGAELVKPGASVKLSCTASGFNIKDTYIHWVNQRPEQGLEWIGRIDPANGHTQYDPKFQGKATITADTSSNTAYLQLSSLTSEDTAVYYCATSDYSYALDSWGQGTSVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPRG
DIVMTQSPSSLAMSVGQKVTMSCKSSQSLLNSNNQKNYLAWYQQKPGQSPKLLVYFASTRESGVPDRFIGSGSGTDFTLTISSVQAEDLADYFCQQHYSTPYTFGGGTKLEIRRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRN
20.855993
24.183088
221
220
219
218
219
218
99
2a12 fab heavy chain
2a12 fab light chain
mus musculus
mus musculus
E
protein
envelope glycoprotein e2
hepatitis c virus isolate hc-j6
31
18
0.9
HL
train
7yd3_A_B
7yd3
single-chain variable fragment of app 3d1 antibody
no
antimicrobial protein
2022-07-03
2023-07-05
x-ray diffraction
2.16
0.254
0.217
N.A.
10.1038/s41467-025-63101-1
0
auth_asym_id
VH:VL
IGHV7
IGLV2
A
B
QVQLVQSGSELKKPGASVRISCKASGYSFTSLSMNWVRQAPGQGLEWMGWISTKSGDPTYAQAFTGRFVFSLDTSVNTAYLQINSLEAGDTAVYYCARGQPPVGWTFDYWGQGTLVTVSS
QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLIIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYTSSSTLVFGGGTKLTVLG
QVQLVQSGSELKKPGASVRISCKASGYSFTSLSMNWVRQAPGQGLEWMGWISTKSGDPTYAQAFTGRFVFSLDTSVNTAYLQINSLEAGDTAVYYCARGQPPVGWTFDYWGQGTLVTVSS
ALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLIIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYTSSSTLVFGGGTKLTVLG
13.582308
13.132359
120
111
120
109
120
109
40
heavy chain of 3d1 scfv
light chain of 3d1 scfv
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7yd3_C_D
7yd3
single-chain variable fragment of app 3d1 antibody
no
antimicrobial protein
2022-07-03
2023-07-05
x-ray diffraction
2.16
0.254
0.217
N.A.
10.1038/s41467-025-63101-1
0
auth_asym_id
VH:VL
IGHV7
IGLV2
C
D
QVQLVQSGSELKKPGASVRISCKASGYSFTSLSMNWVRQAPGQGLEWMGWISTKSGDPTYAQAFTGRFVFSLDTSVNTAYLQINSLEAGDTAVYYCARGQPPVGWTFDYWGQGTLVTVSS
QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLIIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYTSSSTLVFGGGTKLTVLG
QVQLVQSGSELKKPGASVRISCKASGYSFTSLSMNWVRQAPGQGLEWMGWISTKSGDPTYAQAFTGRFVFSLDTSVNTAYLQINSLEAGDTAVYYCARGQPPVGWTFDYWGQGTLVTVS
SALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLIIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYTSSSTLVFGGGTKLTVLG
13.467802
13.145893
120
111
119
110
119
110
38
heavy chain of 3d1 scfv
light chain of 3d1 scfv
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7yd3_E_F
7yd3
single-chain variable fragment of app 3d1 antibody
no
antimicrobial protein
2022-07-03
2023-07-05
x-ray diffraction
2.16
0.254
0.217
N.A.
10.1038/s41467-025-63101-1
0
auth_asym_id
VH:VL
IGHV7
IGLV2
E
F
QVQLVQSGSELKKPGASVRISCKASGYSFTSLSMNWVRQAPGQGLEWMGWISTKSGDPTYAQAFTGRFVFSLDTSVNTAYLQINSLEAGDTAVYYCARGQPPVGWTFDYWGQGTLVTVSS
QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLIIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYTSSSTLVFGGGTKLTVLG
QVQLVQSGSELKKPGASVRISCKASGYSFTSLSMNWVRQAPGQGLEWMGWISTKSGDPTYAQAFTGRFVFSLDTSVNTAYLQINSLEAGDTAVYYCARGQPPVGWTFDYWGQGTLVTVS
SALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLIIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYTSSSTLVFGGGTKLTVL
13.459332
13.047334
120
111
119
109
119
109
41
heavy chain of 3d1 scfv
light chain of 3d1 scfv
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7yd3_H_L
7yd3
single-chain variable fragment of app 3d1 antibody
no
antimicrobial protein
2022-07-03
2023-07-05
x-ray diffraction
2.16
0.254
0.217
N.A.
10.1038/s41467-025-63101-1
0
auth_asym_id
VH:VL
IGHV7
IGLV2
H
L
QVQLVQSGSELKKPGASVRISCKASGYSFTSLSMNWVRQAPGQGLEWMGWISTKSGDPTYAQAFTGRFVFSLDTSVNTAYLQINSLEAGDTAVYYCARGQPPVGWTFDYWGQGTLVTVSS
QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLIIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYTSSSTLVFGGGTKLTVLG
QVQLVQSGSELKKPGASVRISCKASGYSFTSLSMNWVRQAPGQGLEWMGWISTKSGDPTYAQAFTGRFVFSLDTSVNTAYLQINSLEAGDTAVYYCARGQPPVGWTFDYWGQGTLVTVS
QSALTQPPSASGSPGQSVTISCTGTSSDVGGYNYVSWYQQHPGKAPKLIIYEVSKRPSGVPDRFSGSKSGNTASLTVSGLQAEDEADYYCSSYTSSSTLVFGGGTKLTVL
13.47378
13.154013
120
111
119
110
119
110
39
heavy chain of 3d1 scfv
light chain of 3d1 scfv
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
7ydi_H_L
7ydi
sars-cov-2 spike (6p) in complex with 3 r1-32 fabs and 3 ace2, focused refinement of rbd region
no
viral protein/immune system
2022-07-04
2022-08-24
electron microscopy
3.98
N.A.
N.A.
36151403
10.1038/s41564-022-01235-4
0
auth_asym_id
FabH:FabL
IGHV1
IGLV1
H
L
EVQLVESGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPILGIANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARENGYSGYGAAANFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
VQLVESGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPILGIANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARENGYSGYGAAANFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
SVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
24.392612
24.664433
228
214
227
213
227
213
91
heavy chain of r1-32
light chain of r1-32
homo sapiens
homo sapiens
E
protein
spike protein s1
severe acute respiratory syndrome coronavirus 2
66
26
0.76
HL
train
7ydy_H_L
7ydy
sars-cov-2 spike (6p) in complex with 1 r1-32 fab
yes
viral protein/immune system
2022-07-04
2022-08-24
electron microscopy
4.75
N.A.
N.A.
36151403
10.1038/s41564-022-01235-4
0
auth_asym_id
FabH:FabL
IGHV1
IGLV1
H
L
EVQLVESGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPILGIANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARENGYSGYGAAANFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
VQLVESGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPILGIANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARENGYSGYGAAANFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
SVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
23.973557
25.349224
228
214
227
213
227
213
93
heavy chain of r1-32 fab
light chain of r1-32 fab
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
69
26
0.76
HL
train
8dk7_B_A
8dk7
crystal structure of theophylline aptamer soaked with tal2
no
rna/immune system
2022-07-04
2022-11-30
x-ray diffraction
2.46
0.27
0.246
36413497
10.1073/pnas.2213117119
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
B
A
EVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPNTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPNTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGE
22.219925
23.306652
229
214
223
211
223
213
102
fab heavy chain
fab light chain
homo sapiens
homo sapiens
C
RNA
rna (34-mer)
synthetic construct
31
20
0.91
HL
train
8dk7_D_E
8dk7
crystal structure of theophylline aptamer soaked with tal2
no
rna/immune system
2022-07-04
2022-11-30
x-ray diffraction
2.46
0.27
0.246
36413497
10.1073/pnas.2213117119
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
D
E
EVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCDKTH
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPNTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVESGGGLVQPGGSLRLSCAASGFYISYSSIHWVRQAPGKGLEWVASISPYSGSTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARQGYRRRSGRGFDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
DIQMTQSPSSLSASVGDRVTITCRASQSVSSAVAWYQQKPGKAPKLLIYSASSLYSGVPSRFSGSRSGTDFTLTISSLQPEDFATYYCQQSYSFPNTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
22.27651
23.172771
229
214
223
211
223
211
106
fab heavy chain
fab light chain
homo sapiens
homo sapiens
F
RNA
rna (34-mer)
synthetic construct
30
19
0.9
HL
train
7ydh_E
7ydh
cryo em structure of cd97/minig13 complex
no
membrane protein
2022-07-04
2023-07-12
electron microscopy
3.1
N.A.
N.A.
37673067
10.1016/j.chembiol.2023.08.003
0
auth_asym_id
scFv
N.A.
N.A.
E
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
VQLVESGGGLVQPGGSRKLSCSASGFAFSSFGMHWVRQAPEKGLEWVAYISSGSGTIYYADTVKGRFTISRDDPKNTLFLQMTSLRSEDTAMYYCVRSIYYYGSSPFDFWGQGTTLTVSAGGGGSGGGGSGGGGSADIVMTQATSSVPVTPGESVSISCRSSKSLLHSNGNTYLYWFLQRPGQSPQLLIYRMSNLASGVPDRFSGSGSGTAFTLTISRLEAEDVGVYYCMQHLEYPLTFGAGTKLEL
N.A.
17.898273
0
247
0
232
0
247
0
0
scfv16
N.A.
homo sapiens
N.A.
A;B
protein;protein
g protein subunit 13 (gi2-mini-g13 chimera);guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
31;22
19;9
0.95;0.75
H_only
train
7ydm_N
7ydm
cryo-em structure of cd97/gq complex
no
membrane protein
2022-07-04
2023-07-12
electron microscopy
2.89
N.A.
N.A.
37673067
10.1016/j.chembiol.2023.08.003
0
auth_asym_id
VHH
IGHV3
N.A.
N
N.A.
MKYLLPTAAAGLLLLAAQPAMAQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSAAALEHHHHHH
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSS
N.A.
14.268677
0
161
0
128
0
128
0
0
nb35
N.A.
lama glama
N.A.
A;B
protein;protein
engineered mini-gaq;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
37;32
12;12
0.63;0.71
H_only
train
7ydp_D
7ydp
cryo-em structure of cd97/minigs complex
no
membrane protein
2022-07-04
2023-07-12
electron microscopy
3.1
N.A.
N.A.
37673067
10.1016/j.chembiol.2023.08.003
0
auth_asym_id
VHH
IGHV3
N.A.
D
N.A.
MKYLLPTAAAGLLLLAAQPAMAQVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVSSAAALEHHHHHH
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGFTFSNYKMNWVRQAPGKGLEWVSDISQSGASISYTGSVKGRFTISRDNAKNTLYLQMNSLKPEDTAVYYCARCPAPFTRDCFDVTSTTYAYRGQGTQVTVS
N.A.
14.076941
0
161
0
127
0
127
0
0
nb35
N.A.
lama glama
N.A.
A;B
protein;protein
engineered minigas;guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1
homo sapiens;homo sapiens
44;28
11;10
0.52;0.71
H_only
train
7yds_B_C
7yds
the structure of the bispecific antibody targeted pd-l1 and 4-1bb
yes
immune system
2022-07-04
2023-07-19
x-ray diffraction
2.3
0.246
0.194
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV3
IGKV1
B
C
DVQLVESGGGLVQPGGSLRLSCTVSGIDLSSYDMTWVRQAPGKGLEYIGYISYVSRTYYADSVKGRFTISKDTSKNTVYLQMNSLRAEDTAVYYCARDRPDGAATNLWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC
DIQMTQSPSTLSASVGDRVTITCQSSQNVYSNNRLSWYQQKPGKAPKLLIYWTSFLASGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCAGGYSGNLYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
DVQLVESGGGLVQPGGSLRLSCTVSGIDLSSYDMTWVRQAPGKGLEYIGYISYVSRTYYADSVKGRFTISKDTSKNTVYLQMNSLRAEDTAVYYCARDRPDGAATNLWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS
DIQMTQSPSTLSASVGDRVTITCQSSQNVYSNNRLSWYQQKPGKAPKLLIYWTSFLASGVPSRFSGSGSGTEFTLTISSLQPDDFATYYCAGGYSGNLYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNR
22.838514
22.623522
221
217
220
214
220
214
106
anti-pdl1-vh-ch1
anti-pdl1-vl-cl
homo sapiens
homo sapiens
A
protein
programmed cell death 1 ligand 1
homo sapiens
53
17
0.71
HL
train
7ye5_H_L
7ye5
sars-cov-2 spike (6p) in complex with 2 r1-32 fabs
yes
viral protein/immune system
2022-07-05
2022-08-24
electron microscopy
6.75
N.A.
N.A.
36151403
10.1038/s41564-022-01235-4
0
auth_asym_id
FabH:FabL
IGHV1
IGLV1
H
L
EVQLVESGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPILGIANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARENGYSGYGAAANFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
VQLVESGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPILGIANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARENGYSGYGAAANFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
SVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
23.96691
25.390131
228
214
227
213
227
213
93
heavy chain of r1-32 fab
light chain of r1-32 fab
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
70
27
0.75
HL
train
7ye5_G_I
7ye5
sars-cov-2 spike (6p) in complex with 2 r1-32 fabs
yes
viral protein/immune system
2022-07-05
2022-08-24
electron microscopy
6.75
N.A.
N.A.
36151403
10.1038/s41564-022-01235-4
0
auth_asym_id
FabH:FabL
IGHV1
IGLV1
G
I
EVQLVESGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPILGIANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARENGYSGYGAAANFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
VQLVESGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPILGIANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARENGYSGYGAAANFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
SVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
23.989208
25.383951
228
214
227
213
227
213
94
heavy chain of r1-32 fab
light chain of r1-32 fab
homo sapiens
homo sapiens
C
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
70
27
0.75
HL
train
7ye9_H_L
7ye9
sars-cov-2 spike (6p) in complex with 3 r1-32 fabs
yes
viral protein/immune system
2022-07-05
2022-08-24
electron microscopy
4.17
N.A.
N.A.
36151403
10.1038/s41564-022-01235-4
0
auth_asym_id
FabH:FabL
IGHV1
IGLV1
H
L
EVQLVESGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPILGIANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARENGYSGYGAAANFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
VQLVESGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPILGIANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARENGYSGYGAAANFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
SVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
23.996386
25.30603
228
214
227
213
227
213
96
heavy chain of r1-32 fab
light chain of r1-32 fab
homo sapiens
homo sapiens
A
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
68
27
0.75
HL
train
7ye9_N_O
7ye9
sars-cov-2 spike (6p) in complex with 3 r1-32 fabs
yes
viral protein/immune system
2022-07-05
2022-08-24
electron microscopy
4.17
N.A.
N.A.
36151403
10.1038/s41564-022-01235-4
0
auth_asym_id
FabH:FabL
IGHV1
IGLV1
N
O
EVQLVESGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPILGIANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARENGYSGYGAAANFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
VQLVESGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPILGIANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARENGYSGYGAAANFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
SVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
24.002888
25.32656
228
214
227
213
227
213
94
heavy chain of r1-32 fab
light chain of r1-32 fab
homo sapiens
homo sapiens
B
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
69
25
0.71
HL
train
7ye9_G_I
7ye9
sars-cov-2 spike (6p) in complex with 3 r1-32 fabs
yes
viral protein/immune system
2022-07-05
2022-08-24
electron microscopy
4.17
N.A.
N.A.
36151403
10.1038/s41564-022-01235-4
0
auth_asym_id
FabH:FabL
IGHV1
IGLV1
G
I
EVQLVESGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPILGIANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARENGYSGYGAAANFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
QSVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
VQLVESGAEVKKPGSSVKVSCKASGGTFSSYAISWVRQAPGQGLEWMGGIIPILGIANYAQKFQGRVTITADKSTSTAYMELSSLRSEDTAVYYCARENGYSGYGAAANFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSCD
SVLTQPPSVSGAPGQRVTISCTGSSSNIGAGYDVHWYQQLPGTAPKLLIYGNSNRPSGVPDRFSGSKSGTSASLAITGLQAEDEADYYCQSYDSSLSGSVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT
23.99436
25.334694
228
214
227
213
227
213
96
heavy chain of r1-32 fab
light chain of r1-32 fab
homo sapiens
homo sapiens
C
protein
spike glycoprotein
severe acute respiratory syndrome coronavirus 2
69
27
0.77
HL
train
8dke_A_B
8dke
cryo-em structure of cystinosin in a cytosol-open state
yes
membrane protein/transport protein
2022-07-05
2022-09-21
electron microscopy
3.18
N.A.
N.A.
36113465
10.1016/j.cell.2022.08.020
0
auth_asym_id
VH:VL
IGHV3
IGKV1
A
B
MGWSCIILFLVATATGVHSEVMLVESGGGLVKPGGSLKLSCAASGFTFSNYAMSWVRQTPEKRLEWVAAISGNEGTYTYYPDSVRGRFTISRDNARNNLYLQISSLRSEDTALYYCARYGLVGALDFWGQGASVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
MGWSCIILFLVATATGVHSDIQMNQSPSTLSASLGDTITITCRASQNIDVWLNWYQQKPGDIPKLLIYEASNLHTGVPSRFSGSGSGTDFTLAISSLQPEDIATYYCLQGQDYPFTFGSGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVMLVESGGGLVKPGGSLKLSCAASGFTFSNYAMSWVRQTPEKRLEWVAAISGNEGTYTYYPDSVRGRFTISRDNARNNLYLQISSLRSEDTALYYCARYGLVGALDFWGQGA
DIQMNQSPSTLSASLGDTITITCRASQNIDVWLNWYQQKPGDIPKLLIYEASNLHTGVPSRFSGSGSGTDFTLAISSLQPEDIATYYCLQGQDYPFTFGSGTKLEI
13.533177
13.239265
250
233
113
106
113
106
45
fab 3h5 heavy chain
fab 3h5 kappa chain
mus musculus
mus musculus
P
protein
isoform 2 of cystinosin
homo sapiens
39
18
0.9
HL
train
8dki_A_B
8dki
cryo-em structure of cystinosin in a lumen-open state
yes
membrane protein/transport protein
2022-07-05
2022-09-21
electron microscopy
3.32
N.A.
N.A.
36113465
10.1016/j.cell.2022.08.020
0
auth_asym_id
VH:VL
IGHV3
IGKV1
A
B
MGWSCIILFLVATATGVHSEVMLVESGGGLVKPGGSLKLSCAASGFTFSNYAMSWVRQTPEKRLEWVAAISGNEGTYTYYPDSVRGRFTISRDNARNNLYLQISSLRSEDTALYYCARYGLVGALDFWGQGASVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
MGWSCIILFLVATATGVHSDIQMNQSPSTLSASLGDTITITCRASQNIDVWLNWYQQKPGDIPKLLIYEASNLHTGVPSRFSGSGSGTDFTLAISSLQPEDIATYYCLQGQDYPFTFGSGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVMLVESGGGLVKPGGSLKLSCAASGFTFSNYAMSWVRQTPEKRLEWVAAISGNEGTYTYYPDSVRGRFTISRDNARNNLYLQISSLRSEDTALYYCARYGLVGALDFWGQG
DIQMNQSPSTLSASLGDTITITCRASQNIDVWLNWYQQKPGDIPKLLIYEASNLHTGVPSRFSGSGSGTDFTLAISSLQPEDIATYYCLQGQDYPFTFGSGTKLEI
13.405774
13.099251
250
233
112
106
112
106
46
fab 3h5 heavy chain
fab 3h5 kappa chain
mus musculus
mus musculus
P
protein
isoform 2 of cystinosin
homo sapiens
39
19
0.9
HL
train
8dkf_A_B
8dkf
antibody dh1030.1 fab fragment
no
immune system
2022-07-05
2023-07-12
x-ray diffraction
1.79
0.274
0.239
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV3
IGKV2
A
B
EVQLAESGGGLTKPGGSLRLSCAASGFTFSDFYMDWVRQTPGKGLEWVSRINNDGRNKWYADSVRGRFTVSRENAKNTLYLQMDSLRAEDTAVYYCARDRPVYRYWSGGYHLDPWGQGVVVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGG
YVVMTQSPLSLPITPGQPASISCRSSQRLLHSDGNTYLAWYQQRPGQPPRRLIYEVSKLDSGVPDRFSGSGAGTDFTLKISRVEAEDVGVYYCGQNTYLPYSFGQGSKVEIKRAVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGVLKTGNSQESVTEQDSKDNTYSLSSTLTLSNTDYQSHNVYACEVTHQGLSSPVTKSFNRGEC
EVQLAESGGGLTKPGGSLRLSCAASGFTFSDFYMDWVRQTPGKGLEWVSRINNDGRNKWYADSVRGRFTVSRENAKNTLYLQMDSLRAEDTAVYYCARDRPVYRYWSGGYHLDPWGQGVVVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEI
YVVMTQSPLSLPITPGQPASISCRSSQRLLHSDGNTYLAWYQQRPGQPPRRLIYEVSKLDSGVPDRFSGSGAGTDFTLKISRVEAEDVGVYYCGQNTYLPYSFGQGSKVEIKRAVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGVLKTGNSQESVTEQDSKDNTYSLSSTLTLSNTDYQSHNVYACEVTHQGLSSPVTKSFNRG
21.85726
23.404373
230
219
225
217
225
217
92
dh1030.1 heavy chain
dh1030.1 light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
8dkf_H_L
8dkf
antibody dh1030.1 fab fragment
no
immune system
2022-07-05
2023-07-12
x-ray diffraction
1.79
0.274
0.239
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV3
IGKV2
H
L
EVQLAESGGGLTKPGGSLRLSCAASGFTFSDFYMDWVRQTPGKGLEWVSRINNDGRNKWYADSVRGRFTVSRENAKNTLYLQMDSLRAEDTAVYYCARDRPVYRYWSGGYHLDPWGQGVVVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEIKTCGG
YVVMTQSPLSLPITPGQPASISCRSSQRLLHSDGNTYLAWYQQRPGQPPRRLIYEVSKLDSGVPDRFSGSGAGTDFTLKISRVEAEDVGVYYCGQNTYLPYSFGQGSKVEIKRAVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGVLKTGNSQESVTEQDSKDNTYSLSSTLTLSNTDYQSHNVYACEVTHQGLSSPVTKSFNRGEC
EVQLAESGGGLTKPGGSLRLSCAASGFTFSDFYMDWVRQTPGKGLEWVSRINNDGRNKWYADSVRGRFTVSRENAKNTLYLQMDSLRAEDTAVYYCARDRPVYRYWSGGYHLDPWGQGVVVTVSSASTKGPSVFPLAPSSRSTSESTAALGCLVKDYFPEPVTVSWNSGSLTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYVCNVNHKPSNTKVDKRVEI
YVVMTQSPLSLPITPGQPASISCRSSQRLLHSDGNTYLAWYQQRPGQPPRRLIYEVSKLDSGVPDRFSGSGAGTDFTLKISRVEAEDVGVYYCGQNTYLPYSFGQGSKVEIKRAVAAPSVFIFPPSEDQVKSGTVSVVCLLNNFYPREASVKWKVDGVLKTGNSQESVTEQDSKDNTYSLSSTLTLSNTDYQSHNVYACEVTHQGLSSPVTKSFNRG
21.792322
23.441652
230
219
225
217
225
217
94
dh1030.1 heavy chain
dh1030.1 light chain
homo sapiens
homo sapiens
N.A.
N.A.
N.A.
N.A.
0
0
0
HL
train
8aci_H_L
8aci
structure of arg-117 fab in complex with a fragment of complement c2, neutral ph
no
immune system
2022-07-05
2024-01-17
x-ray diffraction
1.85
0.199
0.187
N.A.
N.A.
0
auth_asym_id
FabH:FabL
IGHV1
IGKV4
H
L
EVQLVQSGAEVKKPGASVKVSCKASGYTFTDYNMDWVRQATGQGLEWIGDINPNYESTGYNQKFKGRATMTVDKSISTAYMELSSLRSEDTAVYYCAREDDHDAFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
DNVLTQSPDSLAVSLGERATISCRASKSVRTSGYNYMHWYQQKPGQPPKLLIYLASNLKSGVPDRFSGSGSGTDFTLTISSLQAEDAATYYCQHSRELPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVQLVQSGAEVKKPGASVKVSCKASGYTFTDYNMDWVRQATGQGLEWIGDINPNYESTGYNQKFKGRATMTVDKSISTAYMELSSLRSEDTAVYYCAREDDHDAFAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPK
DNVLTQSPDSLAVSLGERATISCRASKSVRTSGYNYMHWYQQKPGQPPKLLIYLASNLKSGVPDRFSGSGSGTDFTLTISSLQAEDAATYYCQHSRELPYTFGQGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
22.070568
23.294216
219
218
219
218
219
218
107
argx-117 fab heavy chain
argx-117 fab light chain
homo sapiens
homo sapiens
A
protein
complement c2b fragment
homo sapiens
50
21
0.84
HL
train
8aci_K
8aci
structure of arg-117 fab in complex with a fragment of complement c2, neutral ph
no
immune system
2022-07-05
2024-01-17
x-ray diffraction
1.85
0.199
0.187
N.A.
N.A.
0
auth_asym_id
VHH
IGHV3
N.A.
K
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVSSEHHHHHH
N.A.
QVQLQESGGGLVQPGGSLRLSCAASGRTISRYAMSWFRQAPGKEREFVAVARRSGDGAFYADSVQGRFTVSRDDAKNTVYLQMNSLKPEDTAVYYCAIDSDTFYSGSYDYWGQGTQVTVSSEHHH
N.A.
14.453833
0
128
0
125
0
125
0
0
nanobody specific for kappa light chain of fab
N.A.
lama glama
N.A.
N.A.
N.A.
N.A.
N.A.
0
0
0
H_only
train
8dkx_A_B
8dkx
cryo-em structure of cystinosin n288k mutant in a cytosol-open state at ph7.5
yes
membrane protein/transport protein
2022-07-06
2022-09-21
electron microscopy
3
N.A.
N.A.
36113465
10.1016/j.cell.2022.08.020
0
auth_asym_id
VH:VL
IGHV3
IGKV1
A
B
MGWSCIILFLVATATGVHSEVMLVESGGGLVKPGGSLKLSCAASGFTFSNYAMSWVRQTPEKRLEWVAAISGNEGTYTYYPDSVRGRFTISRDNARNNLYLQISSLRSEDTALYYCARYGLVGALDFWGQGASVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKRVEPKSCDKTHHHHHH
MGWSCIILFLVATATGVHSDIQMNQSPSTLSASLGDTITITCRASQNIDVWLNWYQQKPGDIPKLLIYEASNLHTGVPSRFSGSGSGTDFTLAISSLQPEDIATYYCLQGQDYPFTFGSGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC
EVMLVESGGGLVKPGGSLKLSCAASGFTFSNYAMSWVRQTPEKRLEWVAAISGNEGTYTYYPDSVRGRFTISRDNARNNLYLQISSLRSEDTALYYCARYGLVGALDFWGQGA
DIQMNQSPSTLSASLGDTITITCRASQNIDVWLNWYQQKPGDIPKLLIYEASNLHTGVPSRFSGSGSGTDFTLAISSLQPEDIATYYCLQGQDYPFTFGSGTKLEI
13.428597
13.112247
250
233
113
106
113
106
49
fab 3h5 heavy chain
fab 3h5 kappa chain
mus musculus
mus musculus
P
protein
isoform 2 of cystinosin
homo sapiens
38
18
0.9
HL
train
8dl7_D_C
8dl7
cryo-em structure of human ferroportin/slc40 bound to minihepcidin pr73 in nanodisc
no
membrane protein
2022-07-07
2022-12-07
electron microscopy
2.7
N.A.
N.A.
36649314
10.1371/journal.pbio.3001936
0
auth_asym_id
FabH:FabL
IGHV1
IGKV1
D
C
MKCSWVIFFLMAVVTGVNSEVQLQQSGAELVRPGALVKLSCKASGFNIKDYYMHWVKERPEQGLEWIGWIDPENGNTIYDPKFQGKASITADTSSNTAYLQLSSLTSEDTAVYYCARKRGYYGPYFDYWGQGTTLTVSSKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSGLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPA
DIVMTQSQKFMSTSVGDRVSITCKASQNVGTAVAWYQKKPGQSPKLLIYSASNRYSGVPDRFTGSGSGTDFTLTISNMQSEDLADYFCQQYGSYPLTFGSGTKLEIKEAEAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE
EVQLQQSGAELVRPGALVKLSCKASGFNIKDYYMHWVKERPEQGLEWIGWIDPENGNTIYDPKFQGKASITADTSSNTAYLQLSSLTSEDTAVYYCARKRGYYGPYFDYWGQGTTLTVSSKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSGLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPA
DIVMTQSQKFMSTSVGDRVSITCKASQNVGTAVAWYQKKPGQSPKLLIYSASNRYSGVPDRFTGSGSGTDFTLTISNMQSEDLADYFCQQYGSYPLTFGSGTKLEIKEAEAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE
24.019827
23.5913
238
213
219
213
219
213
97
11f9 heavy-chain
11f9 light-chain
mus musculus
mus musculus
A
protein
solute carrier family 40 member 1
homo sapiens
59
23
0.82
HL
train
8dl6_D_C
8dl6
cryo-em structure of human ferroportin/slc40 bound to ca2+ in nanodisc
no
membrane protein
2022-07-07
2023-01-25
electron microscopy
3
N.A.
N.A.
36648329
10.7554/eLife.82947
0
auth_asym_id
FabH:FabL
IGHV1
IGKV1
D
C
MKCSWVIFFLMAVVTGVNSEVQLQQSGAELVRPGALVKLSCKASGFNIKDYYMHWVKERPEQGLEWIGWIDPENGNTIYDPKFQGKASITADTSSNTAYLQLSSLTSEDTAVYYCARKRGYYGPYFDYWGQGTTLTVSSKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSGLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPA
DIVMTQSQKFMSTSVGDRVSITCKASQNVGTAVAWYQKKPGQSPKLLIYSASNRYSGVPDRFTGSGSGTDFTLTISNMQSEDLADYFCQQYGSYPLTFGSGTKLEIKEAEAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE
EVQLQQSGAELVRPGALVKLSCKASGFNIKDYYMHWVKERPEQGLEWIGWIDPENGNTIYDPKFQGKASITADTSSNTAYLQLSSLTSEDTAVYYCARKRGYYGPYFDYWGQGTTLTVSSKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPAVLQSGLYTLSSSVTVTSSTWPSQSITCNVAHPASSTKVDKKIEPA
DIVMTQSQKFMSTSVGDRVSITCKASQNVGTAVAWYQKKPGQSPKLLIYSASNRYSGVPDRFTGSGSGTDFTLTISNMQSEDLADYFCQQYGSYPLTFGSGTKLEIKEAEAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNE
23.87978
23.51626
238
213
219
213
219
213
97
11f9 heavy-chain
11f9 light-chain
mus musculus
mus musculus
A
protein
solute carrier family 40 member 1
homo sapiens
59
24
0.77
HL
train