pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 354
values | r_factor stringclasses 342
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
7t4q | J | K | 0 | A | protein | null | envelope glycoprotein h | VIRAL PROTEIN/Immune System | 12/10/21 | CryoEM structure of the HCMV Pentamer gH/gL/UL128/UL130/UL131A in complex with neutralizing fabs 2C12, 7I13 and 13H11 | HUMAN BETAHERPESVIRUS 5; HOMO SAPIENS | homo sapiens | homo sapiens | human betaherpesvirus 5 | Kschonsak, M., Johnson, M.C., Schelling, R., Green, E.M., Rouge, L., Ho, H., Patel, N., Kilic, C., Kraft, E., Arthur, C.P., Rohou, A.L., Comps-Agrar, L., Martinez-Martin, N., Perez, L., Payandeh, J., Ciferri, C. | 2.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6bpe | E | F | 0 | D | protein | null | reticulocyte binding protein 2, putative | CELL INVASION | 11/22/17 | Plasmodium vivax reticulocyte binding protein 2b (PvRBP2b) bound to monoclonal antibody 6H1 | PLASMODIUM VIVAX (STRAIN SALVADOR I); MUS MUSCULUS | mus musculus | mus musculus | plasmodium vivax (strain salvador i) | Gruszczyk, J., Chan, L.J., Tham, W.H. | 3.34 | X-RAY DIFFRACTION | 0.367 | 0.318 | false | false | IGHV5 | IGKV6 | Kappa | null | null | null | null | null |
2kqm | null | B | 11 | null | null | null | null | IMMUNE SYSTEM | 11/11/09 | Solution structure of the KI O18/O8 Y87H immunoglobulin light chain variable domain | HOMO SAPIENS | null | homo sapiens | null | Volkman, B.F., Peterson, F.C., Ramirez-Alvarado, M., Baden, E.M. | NOT | SOLUTION NMR | null | null | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
2otu | D | C | 0 | Q | peptide | null | peptide antigen | IMMUNE SYSTEM | 02/09/07 | Crystal structure of Fv polyglutamine complex | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | null | Li, P. | 1.68 | X-RAY DIFFRACTION | 0.214 | 0.200 | false | true | IGHV5 | IGLV3 | Lambda | null | null | null | null | null |
7kjh | B | null | 0 | D | protein | null | surface protein p12p | UNKNOWN FUNCTION | 10/26/20 | Plasmodium falciparum protein Pf12p bound to nanobody B9 | VICUGNA PACOS; PLASMODIUM FALCIPARUM | vicugna pacos | null | plasmodium falciparum | Dietrich, M.H., Tham, W.H. | 2.0 | X-RAY DIFFRACTION | 0.217 | 0.180 | false | true | IGHV1 | null | null | null | null | null | null | null |
4ttd | C | D | 0 | B | protein | null | lysozyme c | IMMUNE SYSTEM | 06/20/14 | Structure of a lysozyme antibody complex | HOMO SAPIENS; GALLUS GALLUS | homo sapiens | homo sapiens | gallus gallus | Wensley, B. | 2.15 | X-RAY DIFFRACTION | 0.279 | 0.255 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
4c2i | M | N | 0 | A | protein | null | envelope protein | VIRUS | 08/18/13 | Cryo-EM structure of Dengue virus serotype 1 complexed with Fab fragments of human antibody 1F4 | HOMO SAPIENS; DENGUE VIRUS 1 | homo sapiens | homo sapiens | dengue virus 1 | Fibriansah, G., Tan, J.L., de Alwis, R., Smith, S.A., Ng, T.-S., Kostyuchenko, V.A., Ibarra, K.D., Harris, E., de Silva, A., Crowe Junior, J.E., Lok, S.-M. | 6.0 | ELECTRON MICROSCOPY | null | null | false | false | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
6x04 | J | null | 0 | I | protein | null | nucleoporin nup133 | STRUCTURAL PROTEIN | 05/15/20 | Nup133 (aa55-481) from S. cerevisiae bound by VHH-SAN5 | SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C); VICUGNA PACOS | vicugna pacos | null | saccharomyces cerevisiae (strain atcc 204508 /s288c) | Nordeen, S.A., Schwartz, T.U. | 2.68 | X-RAY DIFFRACTION | 0.261 | 0.244 | false | true | IGHV1 | null | null | null | null | null | null | null |
3u36 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 10/04/11 | Crystal Structure of PG9 Fab | HOMO SAPIENS | homo sapiens | homo sapiens | null | McLellan, J.S., Kwong, P.D. | 3.281 | X-RAY DIFFRACTION | 0.249 | 0.214 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
5dub | H | L | 0 | P | peptide | null | peptide | IMMUNE SYSTEM | 09/18/15 | Context-independent anti-hypusine antibody FabHpu98 in complex with deoxyhypusine | ORYCTOLAGUS CUNICULUS; SYNTHETIC CONSTRUCT | oryctolagus cuniculus | oryctolagus cuniculus | synthetic construct | Zhai, Q., Carter, P.J. | 2.0 | X-RAY DIFFRACTION | 0.220 | 0.181 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7l0l | G | J | 0 | E | C | protein | protein | NA | NA | hemagglutinin ha2 chain | hemagglutinin ha1 chain | IMMUNE SYSTEM/Viral protein | 12/11/20 | Cryo-EM structure of the VRC316 clinical trial, vaccine-elicited, human antibody 316-310-1B11 in complex with an H2 CAN05 HA trimer | HOMO SAPIENS; INFLUENZA A VIRUS (A/CANADA/720/2005(H2N2)) | homo sapiens | homo sapiens | influenza a virus (a/canada/720/2005(h2n2)) | influenza a virus (a/canada/720/2005(h2n2)) | Gorman, J., Kwong, P.D. | 2.85 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
5gs0 | X | Y | 0 | null | null | null | null | IMMUNE SYSTEM | 08/13/16 | Crystal structure of the complex of TLR3 and bi-specific diabody | MUS MUSCULUS; HOMO SAPIENS | mus musculus | mus musculus | null | Kim, J.H., Song, D.H., Youn, S.J., Kim, J.W., Cho, G., Lee, H., Lee, J.O. | 3.275 | X-RAY DIFFRACTION | 0.248 | 0.192 | false | true | IGHV3 | IGKV10 | Kappa | null | null | null | null | null |
7oay | B | null | 0 | A | protein | null | unknown | ANTIVIRAL PROTEIN | 04/20/21 | Nanobody F2 bound to RBD | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; LAMA GLAMA | null | null | null | Naismith, J.H., Mikolajek, H. | 2.34 | X-RAY DIFFRACTION | 0.228 | 0.192 | false | false | IGHV1 | null | null | null | null | null | null | null |
1ub5 | H | L | 0 | H | Hapten | SPB | 4-(4-STYRYL-PHENYLCARBAMOYL)-BUTYRIC ACID | IMMUNE SYSTEM | 03/30/03 | Crystal structure of Antibody 19G2 with hapten at 100K | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Beuscher, A.B., Wirsching, P., Lerner, R.A., Janda, K., Stevens, R.C. | 2.0 | X-RAY DIFFRACTION | 0.267 | 0.248 | false | true | IGHV5 | IGKV2 | Kappa | null | null | null | null | null |
7jum | I | i | 0 | B | protein | null | gametocyte surface protein p230 | CELL INVASION | 08/20/20 | Pfs230 D1 domain in complex with neutralizing antibody LMIV230-01 | PLASMODIUM FALCIPARUM (ISOLATE 3D7); HOMO SAPIENS | homo sapiens | null | plasmodium falciparum (isolate 3d7) | Tolia, N., Tang, W.K. | 1.998 | X-RAY DIFFRACTION | 0.233 | 0.191 | true | true | unknown | unknown | unknown | null | null | null | null | null |
5jxe | D | C | 0 | B | protein | null | programmed cell death protein 1 | IMMUNE SYSTEM | 05/13/16 | Human PD-1 ectodomain complexed with Pembrolizumab Fab | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Na, Z., Bharath, S.R., Song, H. | 2.9 | X-RAY DIFFRACTION | 0.286 | 0.261 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
4h0g | A | a | 0 | null | null | null | null | IMMUNE SYSTEM | 09/08/12 | Crystal structure of mimicry-recognizing native 2D10 scFv | MUS MUSCULUS | mus musculus | null | null | Tapryal, S., Gaur, V., Kaur, K.J., Salunke, D.M. | 2.3 | X-RAY DIFFRACTION | 0.275 | 0.262 | true | true | unknown | unknown | unknown | null | null | null | null | null |
7mmn | D | E | 0 | B | protein | null | fusion glycoprotein f1,fibritin | IMMUNE SYSTEM/VIRAL PROTEIN | 04/29/21 | Crystal Structure of the Prefusion RSV F Glycoprotein bound by human antibody AM14 | HOMO SAPIENS; HUMAN RESPIRATORY SYNCYTIAL VIRUS; ENTEROBACTERIA PHAGE T4 | homo sapiens | homo sapiens | human respiratory syncytial virus,enterobacteria phage t4 | Harshbarger, W., Malito, E. | 3.57 | X-RAY DIFFRACTION | 0.245 | 0.202 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
4evn | E | F | 0 | null | null | null | null | immune system | 04/26/12 | Crystal Structure of Fab CR6261 (somatic heavy chain with germline-reverted light chain) | HOMO SAPIENS | homo sapiens | homo sapiens | null | Whittle, J.R.R. | 2.851 | X-RAY DIFFRACTION | 0.293 | 0.230 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
6plk | I | M | 0 | F | protein | null | env | ANTIVIRAL PROTEIN | 07/01/19 | Crystal structure of ZIKV-116 Fab in complex with ZIKV envelope DIII | HOMO SAPIENS; ZIKA VIRUS ZIKV/H. SAPIENS/FRENCHPOLYNESIA/10087PF/2013 | homo sapiens | homo sapiens | zika virus zikv/h.sapiens/frenchpolynesia/10087pf/2013 | Zhao, H., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID) | 2.3 | X-RAY DIFFRACTION | 0.211 | 0.167 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7s8g | h | l | 0 | null | null | null | null | ANTIVIRAL PROTEIN,IMMUNE SYSTEM | 09/17/21 | Structure of anti-LASV Fab 25.10C with FNQI mutation | HOMO SAPIENS | homo sapiens | homo sapiens | null | Hastie, K.M., Enriquez, A.S. | 2.57 | X-RAY DIFFRACTION | 0.263 | 0.220 | false | false | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
2iq9 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 10/13/06 | PFA2 FAB fragment, triclinic apo form | MUS MUSCULUS | mus musculus | mus musculus | null | Gardberg, A.S., Dealwis, C. | 2.3 | X-RAY DIFFRACTION | 0.278 | 0.211 | false | false | IGHV8 | IGKV1 | Kappa | null | null | null | null | null |
4odh | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 01/10/14 | Crystal structure of human Fab CAP256-VRC26.UCA, a potent V1V2-directed HIV-1 neutralizing antibody | HOMO SAPIENS | homo sapiens | homo sapiens | null | Gorman, J., Doria-Rose, N.A., Schramm, C.A., Moore, P.L., Mascola, J.R., Shapiro, L., Morris, L., Kwong, P.D. | 2.894 | X-RAY DIFFRACTION | 0.244 | 0.224 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
7mzj | F | E | 0 | A | protein | null | spike protein s1 | VIRAL PROTEIN | 05/24/21 | SARS-CoV-2 receptor binding domain bound to Fab WCSL 129 and Fab PDI 93 | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Pymm, P., Dietrich, M.H., Tan, L.L., Chan, L.J., Tham, W.H. | 2.4 | X-RAY DIFFRACTION | 0.268 | 0.222 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
4gxu | W | X | 0 | K | protein | null | hemagglutinin ha1 chain | VIRAL PROTEIN/IMMUNE SYSTEM | 09/04/12 | Crystal structure of antibody 1F1 bound to the 1918 influenza hemagglutinin | HOMO SAPIENS; INFLUENZA A VIRUS | homo sapiens | homo sapiens | influenza a virus | Ekiert, D.C., Wilson, I.A. | 3.294 | X-RAY DIFFRACTION | 0.255 | 0.219 | false | true | IGHV3 | IGLV1 | Lambda | 0 | null | SPR | null | 23236279 |
1nfd | H | G | 0 | D | protein | null | n15 alpha-beta t-cell receptor | COMPLEX (IMMUNORECEPTOR/IMMUNOGLOBULIN) | 08/04/97 | AN ALPHA-BETA T CELL RECEPTOR (TCR) HETERODIMER IN COMPLEX WITH AN ANTI-TCR FAB FRAGMENT DERIVED FROM A MITOGENIC ANTIBODY | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Wang, J.-H., Lim, K., Smolyar, A., Teng, M.-K., Sacchittini, J., Reinherz, E.L. | 2.8 | X-RAY DIFFRACTION | 0.309 | 0.243 | false | true | IGHV6 | IGKV10 | Kappa | null | null | null | null | null |
3mlx | I | M | 0 | Q | peptide | null | hiv-1 gp120 third variable region (v3) crown | IMMUNE SYSTEM | 04/18/10 | Crystal structure of anti-HIV-1 V3 Fab 3074 in complex with an MN V3 peptide | HOMO SAPIENS; HIV-1 M:B_MN | homo sapiens | homo sapiens | hiv-1 m | Kong, X.-P. | 1.9 | X-RAY DIFFRACTION | 0.228 | 0.192 | false | false | IGHV4 | IGLV1 | Lambda | null | null | null | null | null |
6xxo | A | null | 0 | null | null | null | null | ANTITUMOR PROTEIN | 06/10/20 | Crystal structure of NB8, a nanobody targeting prostate specific membrane antigen | CAMELUS DROMEDARIUS | camelus dromedarius | null | null | Shahar, A., Rosenfeld, L., Papo, N. | 1.5 | X-RAY DIFFRACTION | 0.183 | 0.162 | false | true | IGHV1 | null | null | null | null | null | null | null |
7m6g | H | L | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN/ANTIVIRAL PROTEIN | 03/25/21 | Structure of the SARS-CoV-2 S 6P trimer in complex with the human neutralizing antibody Fab fragment, BG7-15 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Barnes, C.O., Bjorkman, P.J. | 3.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
5w1k | L | K | 0 | J | protein | null | pre-glycoprotein polyprotein gp complex | VIRAL PROTEIN/IMMUNE SYSTEM | 06/03/17 | JUNV GP1 CR1-10 Fab CR1-28 Fab complex | HOMO SAPIENS; JUNIN MAMMARENAVIRUS | homo sapiens | homo sapiens | junin mammarenavirus | Raymond, D.D., Clark, L.E., Abraham, J. | 3.99 | X-RAY DIFFRACTION | 0.288 | 0.237 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7lxz | N | O | 0 | K | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 03/05/21 | SARS-CoV-2 S/S2M11/S2L28 Global Refinement | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID) | 2.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
7n0g | Y | null | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN | 05/25/21 | CryoEm structure of SARS-CoV-2 spike protein (S-6P, 1-up) in complex with sybodies (Sb45) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; SYNTHETIC CONSTRUCT | synthetic construct | null | severe acute respiratory syndrome coronavirus2 | Jiang, J., Huang, R., Margulies, D. | 3.02 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
5cd3 | G | H | 0 | null | null | null | null | IMMUNE SYSTEM | 07/02/15 | Structure of immature VRC01-class antibody DRVIA7 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Kong, L., Wilson, I.A. | 2.9 | X-RAY DIFFRACTION | 0.284 | 0.234 | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null |
7qnx | A | B | 0 | E | protein | null | surface glycoprotein | VIRAL PROTEIN | 12/23/21 | The receptor binding domain of SARS-CoV-2 spike glycoprotein in complex with Beta-55 and EY6A Fabs | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, D., Ren, J., Stuart, D.I. | 2.92 | X-RAY DIFFRACTION | 0.266 | 0.229 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
3lrh | null | O | 0 | P | peptide | null | huntingtin | IMMUNE SYSTEM | 02/11/10 | Structure of anti-huntingtin VL domain in complex with huntingtin peptide | HOMO SAPIENS; SYNTHETIC CONSTRUCT | null | homo sapiens | null | Schiefner, A., Chatwell, L., Skerra, A. | 2.6 | X-RAY DIFFRACTION | 0.278 | 0.216 | false | true | null | IGLV1 | Lambda | 0 | -10.022811 | Unknown | null | TBD |
7nfr | B | null | 0 | A | protein | null | polymerase basic protein 2 | VIRAL PROTEIN | 02/07/21 | Fujian capmidlink domain in complex with Nb8194 | INFLUENZA A VIRUS (A/DUCK/FUJIAN/13/2002(H5N1)); HOMO SAPIENS | homo sapiens | null | influenza a virus (a/duck/fujian/13/2002(h5n1)) | Keown, J.R., Grimes, J.M., Fodor, E. | 1.88 | X-RAY DIFFRACTION | 0.245 | 0.195 | false | true | IGHV3 | null | null | null | null | null | null | null |
5h8d | A | null | 0 | null | null | null | null | IMMUNE SYSTEM | 12/23/15 | Crystal structure of an ASC binding nanobody | LAMA GLAMA | lama glama | null | null | Lu, A., Schmidt, F.I., Ruan, J., Tang, C., Wu, H., Ploegh, H.L. | 1.89 | X-RAY DIFFRACTION | 0.203 | 0.169 | false | true | IGHV1 | null | null | null | null | null | null | null |
1gpo | H | L | 0 | null | null | null | null | IMMUNOGLOBULIN | 03/27/97 | CRYSTAL STRUCTURE OF THE RATIONALLY DESIGNED ANTIBODY M41 AS A FAB FRAGMENT | MUS MUSCULUS | synthetic construct | mus musculus | null | Schiweck, W., Skerra, A. | 1.95 | X-RAY DIFFRACTION | 0.283 | 0.214 | false | true | IGHV4 | IGKV6D | Kappa | null | null | null | null | null |
7beo | H | L | 0 | R | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 12/24/20 | Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in a ternary complex with COVOX-253H55L and COVOX-75 Fabs | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, D., Zhao, Y., Ren, J., Stuart, D. | 3.19 | X-RAY DIFFRACTION | 0.274 | 0.234 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6nfn | B | A | 0 | B | Hapten | BCG | 3-(BENZOYLOXY)-8-METHYL-8-AZABICYCLO[3.2.1]OCTANE-2-CARBOXYLIC ACID | IMMUNE SYSTEM | 12/20/18 | Fab fragement of anti-cocaine antibody h2E2 bound to benzoylecgonine | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Pokkuluri, P.R., Tan, K. | 2.63 | X-RAY DIFFRACTION | 0.244 | 0.185 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
6awp | B | C | 0 | A | protein | null | sodium-dependent serotonin transporter | TRANSPORT PROTEIN | 09/06/17 | X-ray structure of the ts3 human serotonin transporter complexed with fluvoxamine at the central site | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Coleman, J.A., Gouaux, E. | 3.8 | X-RAY DIFFRACTION | 0.269 | 0.245 | false | true | IGHV1 | IGKV6 | Kappa | null | null | null | null | null |
2kh2 | B | b | 43 | A | protein | null | interleukin-1 beta | Cytokine/IMMUNE SYSTEM | 03/23/09 | Solution structure of a scFv-IL-1B complex | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | Wilkinson, I.C., Hall, C.J., Veverka, V., Muskett, F.W., Stephens, P.E., Taylor, R.J., Henry, A.J., Carr, M.D. | NOT | SOLUTION NMR | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
7dk2 | A | B | 0 | C | protein | null | spike protein s1 | IMMUNE SYSTEM/VIRAL PROTEIN | 11/22/20 | Crystal structure of SARS-CoV-2 Spike RBD in complex with MW07 Fab | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Wang, J., Jiao, S., Wang, R., Zhang, J., Zhang, M., Wang, M., Chen, S. | 3.0 | X-RAY DIFFRACTION | 0.304 | 0.258 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6amj | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 08/09/17 | CAT192 Fab Wild Type | HOMO SAPIENS | homo sapiens | homo sapiens | null | Lord, D.M., Wei, R.R. | 2.49 | X-RAY DIFFRACTION | 0.262 | 0.206 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7nj5 | F | null | 0 | A | protein | null | polymerase acidic protein | VIRAL PROTEIN | 02/16/21 | 1918 H1N1 Viral influenza polymerase heterotrimer with Nb8199 core | INFLUENZA A VIRUS (A/BREVIG MISSION/1/1918(H1N1)); STAPHYLOCOCCUS AUREUS; CAMELIDAE MIXED LIBRARY; SYNTHETIC CONSTRUCT | camelidae mixed library | null | influenza a virus (a/brevigmission/1/1918(h1n1)) | Keown, J.R., Carrique, L., Fodor, E., Grimes, J.M. | 4.63 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
1pz5 | B | A | 0 | C | peptide | null | octapeptide (mdwnmhaa) | IMMUNE SYSTEM | 07/09/03 | Structural basis of peptide-carbohydrate mimicry in an antibody combining site | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | null | Vyas, N.K., Vyas, M.N., Chervenak, M.C., Bundle, D.R., Pinto, B.M., Quiocho, F.A. | 1.8 | X-RAY DIFFRACTION | 0.254 | 0.219 | false | false | IGHV6 | IGKV1 | Kappa | 0.000004 | -7.8 | ITC | 25 | 14645714 |
4yzf | K | L | 0 | D | protein | null | band 3 anion transport protein | IMMUNE SYSTEM | 03/25/15 | Crystal structure of the anion exchanger domain of human erythrocyte Band 3 | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Alguel, Y., Arakawa, T., Yugiri, T.K., Iwanari, H., Hatae, H., Iwata, M., Abe, Y., Hino, T., Suno, C.I., Kuma, H., Kang, D., Murata, T., Hamakubo, T., Cameron, A.D., Kobayashi, T., Hamasaki, N., Iwata, S. | 3.5 | X-RAY DIFFRACTION | 0.290 | 0.274 | false | false | IGHV8 | IGKV3 | Kappa | null | null | null | null | null |
2mkw | null | A | 18 | null | null | null | null | IMMUNE SYSTEM | 02/13/14 | Solution Structure of 6aJl2 and 6aJL2-R24G Amyloidogenics Light Chain Proteins | HOMO SAPIENS | null | homo sapiens | null | Amero, C., Maya-Martinez, R.C., Gil-Rodriguez, P.C. | NOT | SOLUTION NMR | null | null | false | true | null | IGLV6 | Lambda | null | null | null | null | null |
5ibl | H | L | 0 | B | E | protein | protein | NA | NA | hemagglutinin | hemagglutinin | IMMUNE SYSTEM | 02/22/16 | Human antibody 6639 in complex with influenza hemagglutinin H1 X-181 | INFLUENZA A VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus | influenza a virus | Raymond, D.D., Harrison, S.C. | 3.39 | X-RAY DIFFRACTION | 0.257 | 0.214 | false | true | IGHV5 | IGKV3 | Kappa | null | null | null | null | null |
2kh2 | B | b | 32 | A | protein | null | interleukin-1 beta | Cytokine/IMMUNE SYSTEM | 03/23/09 | Solution structure of a scFv-IL-1B complex | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | Wilkinson, I.C., Hall, C.J., Veverka, V., Muskett, F.W., Stephens, P.E., Taylor, R.J., Henry, A.J., Carr, M.D. | NOT | SOLUTION NMR | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
6glx | C | D | 0 | B | protein | null | galectin-10 | SUGAR BINDING PROTEIN | 05/23/18 | Structure of galectin-10 in complex with the Fab fragment of a Charcot-Leyden crystal solubilizing antibody, 4E8 | HOMO SAPIENS; LAMA GLAMA | lama glama | lama glama | homo sapiens | Verstraete, K., Verschueren, K., Savvides, S.N. | 3.396 | X-RAY DIFFRACTION | 0.360 | 0.303 | false | true | IGHV4 | IGLV3 | Lambda | null | null | null | null | null |
3juy | A | a | 0 | null | null | null | null | IMMUNE SYSTEM | 09/15/09 | Crystal Structure of a 3B3 Variant, a Broadly Neutralizing HIV-1 scFv Antibody | HOMO SAPIENS | homo sapiens | null | null | Clark, K.R., Walsh, S.T. | 2.5 | X-RAY DIFFRACTION | 0.260 | 0.195 | true | true | unknown | unknown | unknown | null | null | null | null | null |
5cez | D | E | 0 | B | protein | null | envelope glycoprotein gp160 | VIRAL PROTEIN/IMMUNE SYSTEM | 07/08/15 | Crystal Structure of the BG505 SOSIP gp140 HIV-1 Env trimer in Complex with an early putative precursor of the PGT121 family at 3.0 Angstrom | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Wilson, I.A., Garces, F. | 3.031 | X-RAY DIFFRACTION | 0.266 | 0.233 | false | true | unknown | unknown | unknown | null | null | null | null | null |
6mg7 | H | L | 0 | G | protein | null | clade a/e 93th057 hiv-1 gp120 core | VIRAL PROTEIN/IMMUNE SYSTEM | 09/13/18 | Crystal structure of the RV144 C1-C2 specific antibody CH54 Fab in complex with HIV-1 CLADE A/E GP120 and M48U1 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Van, V., Tolbert, W.D., Pazger, M. | 2.91 | X-RAY DIFFRACTION | 0.307 | 0.250 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6y0e | B | null | 0 | null | null | null | null | IMMUNE SYSTEM | 02/07/20 | Nbe LBM | LAMA GLAMA | lama glama | null | null | Pompidor, G., Zimmermann, S., Loew, C., Schneider, T. | 1.5 | X-RAY DIFFRACTION | 0.180 | 0.161 | false | true | IGHV1 | null | null | null | null | null | null | null |
4krm | D | null | 0 | C | protein | null | epidermal growth factor receptor | TRANSFERASE/IMMUNE SYSTEM | 05/16/13 | Nanobody/VHH domain 7D12 in complex with domain III of the extracellular region of EGFR, pH 3.5 | LAMA GLAMA; HOMO SAPIENS | lama glama | null | homo sapiens | Ferguson, K.M., Schmitz, K.R. | 2.655 | X-RAY DIFFRACTION | 0.244 | 0.208 | false | true | IGHV1 | null | null | null | null | null | null | null |
7sp7 | C | null | 0 | A | protein | null | hyaluronan synthase | MEMBRANE PROTEIN | 11/02/21 | Chlorella virus hyaluronan synthase inhibited by UDP | PARAMECIUM BURSARIA CHLORELLA VIRUS CZ-2; LAMA GLAMA | lama glama | null | paramecium bursaria chlorella virus cz-2 | Maloney, F.P., Kuklewicz, J., Zimmer, J. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
5f97 | F | null | 0 | B | protein | null | adhesin binding fucosylated histo-blood group antigen,adhesin,adhesin binding fucosylated histo-blood group antigen | CELL ADHESION | 12/09/15 | Blood group antigen binding adhesin BabA of Helicobacter pylori strain A730 in complex with blood group A type 1 hexasaccharide | HELICOBACTER PYLORI; LAMA GLAMA | lama glama | null | helicobacter pylori | Moonens, K., Gideonsson, P., Subedi, S., Romao, E., Oscarson, S., Muyldermans, S., Boren, T., Remaut, H. | 2.62 | X-RAY DIFFRACTION | 0.237 | 0.188 | false | true | IGHV1 | null | null | null | null | null | null | null |
7cwl | I | K | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN | 08/29/20 | SARS-CoV-2 spike protein and P17 fab complex with one RBD in close state | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Wang, X., Wang, N. | 3.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
3p0y | H | L | 0 | A | protein | null | epidermal growth factor receptor | IMMUNE SYSTEM | 09/29/10 | anti-EGFR/HER3 Fab DL11 in complex with domain III of EGFR extracellular region | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Eigenbrot, C., Shia, S. | 1.8 | X-RAY DIFFRACTION | 0.215 | 0.181 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -12.36 | SPR | 37 | 22014573 |
6mns | A | B | 0 | Q | peptide | null | envelope glylcoprotein | IMMUNE SYSTEM | 10/02/18 | Rhesus macaque anti-HIV V3 antibody DH753 with gp120 V3 ZAM18 peptide | MACACA MULATTA; SYNTHETIC CONSTRUCT | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | Nicely, N.I. | 2.7 | X-RAY DIFFRACTION | 0.256 | 0.170 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
6ehv | X | x | 0 | null | null | null | null | IMMUNE SYSTEM | 09/15/17 | scFv AbVance: increasing our knowledge of antibody structural space to enable faster and better decision making in drug discovery | HOMO SAPIENS | homo sapiens | null | null | Hargreaves, D. | 2.54 | X-RAY DIFFRACTION | 0.314 | 0.275 | true | true | unknown | unknown | unknown | null | null | null | null | null |
2mmx | null | A | 15 | null | null | null | null | IMMUNE SYSTEM | 03/20/14 | NMR study of 6aJL2 | HOMO SAPIENS | null | homo sapiens | null | Amero, C., Maya-Martinez, R.C., Gil-Rodriguez, P.C. | NOT | SOLUTION NMR | null | null | false | true | null | IGLV6 | Lambda | null | null | null | null | null |
6avr | H | L | 0 | B | A | protein | protein | NA | NA | integrin beta-3 | integrin alpha-v | SIGNALING PROTEIN | 09/04/17 | Human alpha-V beta-3 Integrin (intermediate conformation) in complex with the therapeutic antibody LM609 | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | homo sapiens | Borst, A.J., James, Z.N., Zagotta, W.N., Ginsberg, M., Rey, F.A., DiMaio, F., Backovic, M., Veesler, D. | 35 | ELECTRON MICROSCOPY | null | null | false | true | IGHV5 | IGKV5 | Kappa | null | null | null | null | null |
6ibb | D | null | 0 | C | protein | null | succinate receptor 1 | MEMBRANE PROTEIN | 11/29/18 | Crystal structure of the rat isoform of the succinate receptor SUCNR1 (GPR91) in complex with a nanobody | RATTUS NORVEGICUS; VICUGNA PACOS | vicugna pacos | null | rattus norvegicus | Haffke, M., Jaakola, V.-P. | 2.12 | X-RAY DIFFRACTION | 0.216 | 0.178 | false | true | IGHV1 | null | null | null | null | null | null | null |
7jtr | D | d | 0 | C | protein | null | maltose/maltodextrin-binding periplasmic protein | SUGAR BINDING PROTEIN/IMMUNE SYSTEM | 08/18/20 | Complex of maltose-binding protein (MBP) with single-chain Fv (scFv) | MUS MUSCULUS; ESCHERICHIA COLI | mus musculus | null | escherichia coli | Loll, P.J. | 2.5 | X-RAY DIFFRACTION | 0.237 | 0.201 | true | true | unknown | unknown | unknown | null | null | null | null | null |
4gxu | U | V | 0 | I | protein | null | hemagglutinin ha1 chain | VIRAL PROTEIN/IMMUNE SYSTEM | 09/04/12 | Crystal structure of antibody 1F1 bound to the 1918 influenza hemagglutinin | HOMO SAPIENS; INFLUENZA A VIRUS | homo sapiens | homo sapiens | influenza a virus | Ekiert, D.C., Wilson, I.A. | 3.294 | X-RAY DIFFRACTION | 0.255 | 0.219 | false | true | IGHV3 | IGLV1 | Lambda | 0 | null | SPR | null | 23236279 |
7q9f | J | K | 0 | C | protein | null | surface glycoprotein | Viral Protein/Immune System | 11/12/21 | Beta-50 fab in complex with SARS-CoV-2 beta-Spike glycoprotein | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Duyvesteyn, H.M.E., Ren, J., Stuart, D.I. | 3.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
2kqn | null | B | 8 | null | null | null | null | IMMUNE SYSTEM | 11/11/09 | Solution structure of the AL-09 H87Y immunoglobulin light chain variable domain | HOMO SAPIENS | null | homo sapiens | null | Volkman, B.F., Peterson, F.C., Ramirez-Alvarado, M., Baden, E.M. | NOT | SOLUTION NMR | null | null | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
5esz | A | B | 0 | C | protein | null | 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase,envelope glycoprotein gp160 | IMMUNE SYSTEM | 11/17/15 | Crystal Structure of Broadly Neutralizing Antibody CH04, Isolated from Donor CH0219, in Complex with Scaffolded Trimeric HIV-1 Env V1V2 Domain from the Clade AE Strain A244 | HOMO SAPIENS; HAEMOPHILUS INFLUENZAE | homo sapiens | homo sapiens | haemophilus influenzae, human immunodeficiencyvirus 1, haemophilus influenzae (strain atcc 51907 / dsm 11121 / kw20 / rd) | Gorman, J., Yang, M., Kwong, P.D. | 4.191 | X-RAY DIFFRACTION | 0.282 | 0.252 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
4hk0 | C | D | 0 | null | null | null | null | IMMUNE SYSTEM | 10/14/12 | UCA Fab (unbound) from CH65-CH67 Lineage | HOMO SAPIENS | homo sapiens | homo sapiens | null | Schmidt, A.G., Harrison, S.C. | 2.497 | X-RAY DIFFRACTION | 0.258 | 0.206 | false | true | IGHV1 | IGLV3 | Lambda | null | null | null | null | null |
6vrk | B | C | 0 | A | protein | null | sodium-dependent serotonin transporter | TRANSPORT PROTEIN | 02/07/20 | Cryo-EM structure of the wild-type human serotonin transporter complexed with Br-paroxetine and 8B6 Fab | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Coleman, J.A., Navratna, V., Yang, D. | 4.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV6 | Kappa | null | null | null | null | null |
7t0i | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 11/29/21 | Crystal structure of S25-39 Fab Unliganded 3 | MUS MUSCULUS | mus musculus | mus musculus | null | Legg, M.S.G., Blackler, R.J., Evans, S.V. | 2.1 | X-RAY DIFFRACTION | 0.225 | 0.180 | false | true | IGHV7 | IGKV8 | Kappa | null | null | null | null | null |
4xzu | E | F | 0 | G | protein | null | coagulation factor viii | IMMUNE SYSTEM | 02/05/15 | Crystal Structure of the Human Factor VIII C2 Domain in Complex with Murine 3E6 Inhibitory Antibody | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Spiegel, P.C., Wuerth, M.E. | 2.61 | X-RAY DIFFRACTION | 0.267 | 0.199 | false | false | IGHV9 | IGKV4 | Kappa | null | null | null | null | null |
7jvc | H | L | 0 | A | protein | null | sars-cov-2 spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 08/20/20 | SARS-CoV-2 spike in complex with the S2A4 neutralizing antibody Fab fragment | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Park, Y.J., Tortorici, M.A., Walls, A.C., Czudnochowski, N., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G., Veesler, D. | 3.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV6 | Lambda | null | null | null | null | null |
7mw6 | F | G | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN/Immune System | 05/15/21 | Structure of the SARS-CoV-2 Spike trimer with three RBDs up in complex with the Fab fragment of human neutralizing antibody clone 2 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Hu, Y., Xiong, Y. | 3.22 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
5f8q | C | null | 0 | A | protein | null | adhesin binding fucosylated histo-blood group antigen,adhesin,adhesin binding fucosylated histo-blood group antigen | CELL ADHESION | 12/09/15 | Blood group antigen binding adhesin BabA of Helicobacter pylori strain S831 in complex with Nanobody Nb-ER19 | HELICOBACTER PYLORI; LAMA GLAMA | lama glama | null | helicobacter pylori | Moonens, K., Gideonsson, P., Subedi, S., Romao, E., Oscarson, S., Muyldermans, S., Boren, T., Remaut, H. | 2.59 | X-RAY DIFFRACTION | 0.230 | 0.195 | false | true | IGHV1 | null | null | null | null | null | null | null |
6i8s | F | J | 0 | B | protein | null | plasminogen activator inhibitor 1 | BLOOD CLOTTING | 11/21/18 | Discovery and characterisation of an antibody that selectively modulates the inhibitory activity of plasminogen activator inhibitor-1 | HOMO SAPIENS; ESCHERICHIA COLI | null | null | homo sapiens | Vousden, K.A., Lundqvist, T., Popovic, B. | 2.9 | X-RAY DIFFRACTION | 0.243 | 0.219 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7n9b | F | null | 0 | C | B | protein | protein | NA | NA | spike glycoprotein | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 06/17/21 | Potent neutralizing nanobodies resist convergent circulating variants of SARS-CoV-2 by targeting novel and conserved epitopes-CovS with NB21 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; LAMA GLAMA | lama glama | null | severe acute respiratory syndrome coronavirus2 | severe acute respiratory syndrome coronavirus2 | Sun, D., Zhang, C., Shi, Y. | 3.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
2kqm | null | A | 0 | null | null | null | null | IMMUNE SYSTEM | 11/11/09 | Solution structure of the KI O18/O8 Y87H immunoglobulin light chain variable domain | HOMO SAPIENS | null | homo sapiens | null | Volkman, B.F., Peterson, F.C., Ramirez-Alvarado, M., Baden, E.M. | NOT | SOLUTION NMR | null | null | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
6ani | I | M | 0 | null | null | null | null | IMMUNE SYSTEM | 08/13/17 | Coltuximab Fab in complex with anti-Kappa VHH domain | LAMA GLAMA; HOMO SAPIENS | homo sapiens | homo sapiens | null | Ereno Orbea, J., Sicard, T., Julien, J.-P. | 2.4 | X-RAY DIFFRACTION | 0.286 | 0.245 | false | true | IGHV1 | IGKV4 | Kappa | 0 | -11.061162 | Unknown | null | TBD |
7d0d | G | F | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 09/09/20 | S protein of SARS-CoV-2 in complex bound with P5A-3C12_2B | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Yan, R.H., Wang, R.K., Ju, B., Yu, J.F., Zhang, Y.Y., Liu, N., Wang, H.W., Wang, X.Q., Zhang, L.Q., Zhou, Q. | 3.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV2 | IGKV4 | Kappa | null | null | null | null | null |
7rth | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 08/13/21 | Crystal structure of an anti-lysozyme nanobody in complex with an anti-nanobody Fab ""NabFab"" | HOMO SAPIENS | homo sapiens | homo sapiens | null | Filippova, E.V., Mukherjee, S., Bloch, J.S., Locher, K.P., Kossiakoff, A.A. | 3.19 | X-RAY DIFFRACTION | 0.267 | 0.216 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
2q1e | null | D | 0 | null | null | null | null | PROTEIN FIBRIL | 05/24/07 | Altered dimer interface decreases stability in an amyloidogenic kappa1 Bence Jones protein. | HOMO SAPIENS | null | homo sapiens | null | Thompson, J.R., Ramirez-Alvarado, M., Baden, E.M. | 2.55 | X-RAY DIFFRACTION | 0.206 | 0.165 | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
6ea5 | M | N | 0 | B | C | D | protein | protein | protein | NA | NA | NA | glycoprotein | envelope glycoprotein | glycoprotein | VIRAL PROTEIN/immune system | 08/02/18 | Structure of BDBV GPcl in complex with the pan-ebolavirus mAb ADI-15878 | BUNDIBUGYO EBOLAVIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | bundibugyo ebolavirus | bundibugyo ebolavirus | bundibugyo ebolavirus | King, L.B., West, B.R., Moyer, C.L., Fusco, M.L., Milligan, J.C., Hui, S., Saphire, E.O. | 4.75 | X-RAY DIFFRACTION | 0.305 | 0.295 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7wdf | D | E | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN | 12/21/21 | SARS-CoV-2 Beta spike in complex with two S3H3 Fabs | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS | mus musculus | mus musculus | severe acute respiratory syndrome coronavirus2 | Wang, Y.F., Cong, Y. | 3.9 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
5n4g | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 02/10/17 | human Fab fragment 12E1 against NHBA from Neisseria meningitidis | HOMO SAPIENS | homo sapiens | homo sapiens | null | Maritan, M., Malito, E. | 2.75 | X-RAY DIFFRACTION | 0.268 | 0.186 | false | true | IGHV1 | IGKV2 | Kappa | null | null | null | null | null |
4cad | H | G | 0 | I | protein | null | ras and a-factor converting enzyme 1, rce1 | PROTEIN BINDING | 10/08/13 | Mechanism of farnesylated CAAX protein processing by the integral membrane protease Rce1 | METHANOCOCCUS MARIPALUDIS; MUS MUSCULUS | mus musculus | mus musculus | methanococcus maripaludis | Kulkarni, K., Manolaridis, I., Dodd, R.B., Cronin, N., Ogasawara, S., Iwata, S., Barford, D. | 2.5 | X-RAY DIFFRACTION | 0.2669 | 0.2262 | false | false | IGHV1 | IGKV12 | Kappa | null | null | null | null | null |
6um6 | K | L | 0 | I | protein | null | ch848 10.17dt gp120 | VIRAL PROTEIN/immune system | 10/09/19 | Cryo-EM structure of HIV-1 neutralizing antibody DH270.6 in complex with CH848 10.17DT Env | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Acharya, P., Henderson, R.C., Saunder, K.O., Haynes, B.F. | 4.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null |
6e8v | c | d | 0 | null | null | null | null | IMMUNE SYSTEM | 09/04/19 | The crystal structure of bovine ultralong antibody BOV-1 | BOS TAURUS | bos taurus | bos taurus | null | Dong, J., Crowe, J.E. | 3.79 | X-RAY DIFFRACTION | 0.275 | 0.218 | false | false | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
6fys | E | null | 0 | null | null | null | null | VIRAL PROTEIN | 03/12/18 | Structure of single domain antibody SD83 | LAMA GLAMA | lama glama | null | null | Laursen, N.S., Wilson, I.A. | 2.0 | X-RAY DIFFRACTION | 0.231 | 0.201 | false | true | IGHV1 | null | null | null | null | null | null | null |
7wd0 | c | d | 0 | B | protein | null | light chain of s5d2 fab | VIRAL PROTEIN | 12/20/21 | SARS-CoV-2 Beta spike in complex with two S5D2 Fabs | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS | mus musculus | mus musculus | severe acute respiratory syndrome coronavirus2 | Wang, Y.F., Cong, Y. | 3.3 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
5tzt | H | L | 0 | C | protein | null | leukocyte surface antigen cd47 | IMMUNE SYSTEM | 11/22/16 | Crystal structure of human CD47 ECD bound to Fab of C47B161 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Cardoso, R.M.F. | 2.89 | X-RAY DIFFRACTION | 0.328 | 0.257 | false | true | IGHV1 | IGKV1 | Kappa | 0 | -11.653534 | SPR | null | TBD |
4kkb | C | D | 0 | A | protein | null | h(+)/cl(-) exchange transporter clca | TRANSPORT PROTEIN | 05/05/13 | Structure of the E148A mutant of CLC-ec1 deltaNC construct in 20mM fluoride and 20mM Bromide | ESCHERICHIA COLI; MUS MUSCULUS | mus musculus | mus musculus | escherichia coli | Lim, H.-H., Miller, C. | 3.021 | X-RAY DIFFRACTION | 0.268 | 0.236 | false | true | IGHV4 | IGKV4 | Kappa | null | null | null | null | null |
2uyl | Y | X | 0 | null | null | null | null | IMMUNE SYSTEM | 04/10/07 | Crystal structure of a monoclonal antibody directed against an antigenic determinant common to Ogawa and Inaba serotypes of Vibrio cholerae O1 | MUS MUSCULUS | mus musculus | mus musculus | null | Ahmed, F., Haouz, A., Nato, F., Fournier, J.M., Alzari, P.M. | 2.5 | X-RAY DIFFRACTION | 0.257 | 0.211 | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
5my6 | B | null | 0 | A | protein | null | receptor tyrosine-protein kinase erbb-2 | TRANSFERASE | 01/25/17 | Crystal structure of a HER2-Nb complex | HOMO SAPIENS; CAMELUS DROMEDARIUS | camelus dromedarius | null | homo sapiens | Sterckx, Y.G.-J., D'Huyvetter, M., Devoogdt, N. | 2.246 | X-RAY DIFFRACTION | 0.220 | 0.185 | false | true | IGHV1 | null | null | 0 | -11.458323 | SPR | null | TBD |
6w05 | H | L | 0 | P | peptide | null | npna2 peptide | IMMUNE SYSTEM | 02/29/20 | Crystal structure of Fab356 in complex with NPNA2 peptide from circumsporozoite protein | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | plasmodium falciparum | Pholcharee, T., Oyen, D., Wilson, I.A. | 2.516 | X-RAY DIFFRACTION | 0.256 | 0.209 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
7cn2 | I | i | 0 | F | protein | null | major capsid protein l1 | IMMUNE SYSTEM/VIRAL PROTEIN | 07/29/20 | Subparticle refinement of human papillomavirus type 16 pesudovirus in complex with H16.001 Fab | HUMAN PAPILLOMAVIRUS TYPE 16; ORYCTOLAGUS CUNICULUS | oryctolagus cuniculus | oryctolagus cuniculus | human papillomavirus type 16 | He, M.Z., Li, S.W. | 3.43 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
4jm4 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 03/13/13 | Crystal Structure of PGT 135 Fab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Kong, L., Wilson, I.A. | 1.751 | X-RAY DIFFRACTION | 0.245 | 0.207 | false | true | IGHV4 | IGKV3 | Kappa | null | null | null | null | null |
1e6j | H | L | 0 | P | protein | null | capsid protein p24 | HIV CAPSID PROTEIN (P24) | 08/18/00 | Crystal structure of HIV-1 capsid protein (p24) in complex with Fab13B5 | HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 (CLONE 12); MUS MUSCULUS | mus musculus | mus musculus | human immunodeficiency virus type 1(clone 12) | Berthet-Colominas, C., Monaco, S., Novelli, A., Sibai, G., Mallet, F., Cusack, S. | 3.0 | X-RAY DIFFRACTION | 0.284 | 0.210 | false | false | IGHV1 | IGKV4 | Kappa | 0 | -10.28 | SPR | null | 11080628 |
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