pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 354
values | r_factor stringclasses 342
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
5h30 | K | L | 0 | B | protein | null | structural protein e | VIRUS/IMMUNE SYSTEM | 10/19/16 | Cryo-EM structure of zika virus complexed with Fab C10 at pH 6.5 | HOMO SAPIENS; ZIKA VIRUS | homo sapiens | homo sapiens | zika virus | Zhang, S., Kostyuchenko, V., Ng, T.-S., Lok, S.-M. | 4.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null |
7p2d | C | null | 0 | A | protein | null | isoform 2 of integrin alpha-m | IMMUNE SYSTEM | 07/05/21 | Structure of alphaMbeta2/Cd11bCD18 headpiece in complex with a nanobody | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | Jensen, R.K., Andersen, G.R. | 3.2 | X-RAY DIFFRACTION | 0.295 | 0.261 | false | true | IGHV1 | null | null | null | null | null | null | null |
3dwt | C | null | 0 | null | null | null | null | IMMUNE SYSTEM | 07/23/08 | Structure of CabBCII-10 nanobody | CAMELUS DROMEDARIUS | camelus dromedarius | null | null | Vincke, C., Loris, R., Muyldermans, S., Conrath, K. | 2.9 | X-RAY DIFFRACTION | 0.305 | 0.245 | false | true | IGHV1 | null | null | null | null | null | null | null |
2ht3 | C | D | 0 | A | protein | null | h(+)/cl(-) exchange transporter clca | MEMBRANE PROTEIN | 07/25/06 | Structure of the Escherichia coli ClC chloride channel Y445L mutant and Fab complex | ESCHERICHIA COLI; MUS MUSCULUS | mus musculus | mus musculus | escherichia coli | Accardi, A., Lobet, S., Williams, C., Miller, C., Dutzler, R. | 3.3 | X-RAY DIFFRACTION | 0.269 | 0.253 | false | false | IGHV4 | IGKV4 | Kappa | null | null | null | null | null |
7cws | N | K | 0 | O | protein | null | spike glycoprotein | VIRAL PROTEIN | 08/31/20 | SARS-CoV-2 Spike Proteins Trimer in Complex with FC05 and H014 Fabs Cocktail | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Wang, L., Wang, X. | 3.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
5aaw | D | d | 0 | E | protein | null | dengue serotype 4 envelope protein domain 3 | null | 07/30/15 | Structure of a redesigned cross-reactive antibody to dengue virus with increased in vivo potency | DENGUE VIRUS; MUS MUSCULUS | mus musculus | null | dengue virus | Wong, Y., Robinson, L., Lescar, J., Sasisekharan, R. | 3.27 | X-RAY DIFFRACTION | 0.26258 | 0.22661 | true | true | unknown | unknown | unknown | 0 | -11.411242 | SPR | null | TBD |
6cxg | H | L | 0 | A | peptide | null | 10v1s glycopeptide | IMMUNE SYSTEM | 04/03/18 | anti-HIV-1 Fab 2G12 in complex with glycopeptide 10V1S | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | synthetic construct | Stanfield, R.L., Wilson, I.A. | 2.298 | X-RAY DIFFRACTION | 0.237 | 0.197 | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null |
6x98 | F | E | 0 | C | protein | null | bg505 hiv-1 env gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 06/02/20 | Cryo-EM model of HIV-1 Env BG505 SOSIP.664 in complex with rabbit monoclonal antibody 11B fragment antigen binding variable domain | HUMAN IMMUNODEFICIENCY VIRUS 1; ORYCTOLAGUS CUNICULUS | oryctolagus cuniculus | oryctolagus cuniculus | human immunodeficiency virus 1 | Ozorowski, G., Cottrell, C.A., Ward, A.B. | 3.38 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
2ipu | G | K | 0 | P | peptide | null | abeta 1-8 peptide | IMMUNE SYSTEM | 10/12/06 | PFA1 Fab fragment complexed with Abeta 1-8 peptide | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | null | Gardberg, A.S., Dealwis, C. | 1.65 | X-RAY DIFFRACTION | 0.225 | 0.182 | false | false | IGHV8 | IGKV1 | Kappa | null | null | null | null | null |
2kh2 | B | b | 13 | A | protein | null | interleukin-1 beta | Cytokine/IMMUNE SYSTEM | 03/23/09 | Solution structure of a scFv-IL-1B complex | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | Wilkinson, I.C., Hall, C.J., Veverka, V., Muskett, F.W., Stephens, P.E., Taylor, R.J., Henry, A.J., Carr, M.D. | NOT | SOLUTION NMR | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
5vjq | A | B | 0 | I | protein | null | lysozyme | HYDROLASE/IMMUNE SYSTEM | 04/19/17 | Complex between HyHEL10 Fab fragment heavy chain mutant (I29F, S52T, Y53F) and Pekin duck egg lysozyme isoform I (DEL-I) | MUS MUSCULUS; ANAS PLATYRHYNCHOS | mus musculus | mus musculus | anas platyrhynchos | Langley, D.B., Christ, D. | 1.9 | X-RAY DIFFRACTION | 0.235 | 0.193 | false | true | IGHV3 | IGKV5 | Kappa | null | null | null | null | null |
5c2u | B | null | 0 | A | protein | null | nup54 | TRANSPORT PROTEIN | 06/16/15 | Ferredoxin-like domain of nucleoporin Nup54 bound to a nanobody | CAMELUS DROMEDARIUS; XENOPUS LAEVIS | camelus dromedarius | null | xenopus laevis | Chug, H., Trakhanov, S., Hulsmann, B.B., Pleiner, T., Gorlich, D. | 1.55 | X-RAY DIFFRACTION | 0.205 | 0.176 | false | true | IGHV1 | null | null | null | null | null | null | null |
6idi | M | N | 0 | F | protein | null | premembrane protein | VIRUS | 09/10/18 | Cryo-EM structure of Immature Dengue virus serotype 3 in complex with human antibody 1H10 Fab at pH 8.0. | DENGUE VIRUS 3; HOMO SAPIENS | homo sapiens | homo sapiens | dengue virus 3 | Wirawan, M., Fibriansah, G., Ng, T.S., Zhang, Q., Kostyuchenko, V.A., Shi, J., Lok, S.M. | 12 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
7s3m | H | L | 0 | A | peptide | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 09/07/21 | MERS-CoV S stem helix peptide bound to Fab22 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | middle east respiratory syndrome-relatedcoronavirus | Goldsmith, J.A., McLellan, J.S. | 2.4 | X-RAY DIFFRACTION | 0.252 | 0.209 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7nxa | H | L | 0 | E | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 03/17/21 | Crystal structure of the receptor binding domain of SARS-CoV-2 B.1.351 variant Spike glycoprotein in complex with COVOX-222 and EY6A Fabs | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, D., Ren, J., Stuart, D. | 2.5 | X-RAY DIFFRACTION | 0.253 | 0.205 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
3t2n | H | L | 0 | A | protein | null | serine protease hepsin | HYDROLASE | 07/22/11 | Human hepsin protease in complex with the Fab fragment of an inhibitory antibody | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Koschubs, T., Dengl, S., Duerr, H., Kaluza, K., Georges, G., Hartl, C., Jennewein, S., Lanzendoerfer, M., Auer, J., Stern, A., Huang, K.-S., Kostrewa, D., Ries, S., Hansen, S., Kohnert, U., Cramer, P., Mundigl, O. | 2.55 | X-RAY DIFFRACTION | 0.275 | 0.242 | false | true | IGHV7 | IGLV7 | Lambda | 0 | -10.5 | SPR | 37 | 22132769 |
1j05 | H | L | 0 | null | null | null | null | Immune system | 11/01/02 | The crystal structure of anti-carcinoembryonic antigen monoclonal antibody T84.66 Fv fragment | MUS MUSCULUS | mus musculus | mus musculus | null | Kondo, H., Nishimura, Y., Shiroishi, M., Asano, R., Noro, N., Tsumoto, K., Kumagai, I. | 1.5 | X-RAY DIFFRACTION | unknown | unknown | false | true | IGHV14 | IGKV3 | Kappa | null | null | null | null | null |
7f63 | H | L | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 06/24/21 | Cryo-EM structure of SARS-CoV-2 spike in complex with a neutralizing antibody chAb-45 (Focused refinement of S-RBD and chAb-45 region) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Yang, T.J., Yu, P.Y., Wu, H.C., Hsu, S.T.D. | 3.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV6 | Kappa | null | null | null | null | null |
3g6a | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 02/06/09 | Crystal structure of anti-IL-13 antibody CNTO607 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Teplyakov, A., Obmolova, G., Gilliland, G.L. | 2.1 | X-RAY DIFFRACTION | 0.283 | 0.208 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
5nuz | H | L | 0 | D | protein | null | pre-glycoprotein polyprotein gp complex | IMMUNE SYSTEM | 05/03/17 | Junin virus GP1 glycoprotein in complex with an antibody Fab fragment | MUS MUSCULUS; JUNIN MAMMARENAVIRUS | mus musculus | mus musculus | junin mammarenavirus | Zeltina, A., Krumm, S.A., Sahin, M., Struwe, W.B., Harlos, K., Nunberg, J.H., Crispin, M., Pinschewer, D.D., Doores, K.J., Bowden, T.A. | 1.85 | X-RAY DIFFRACTION | 0.210 | 0.185 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6oe4 | E | F | 0 | D | protein | null | fusion glycoprotein f0 | Viral protein/immune system | 03/27/19 | Prefusion RSV F monomer bound by neutralizing antibody CR9501 | HUMAN RESPIRATORY SYNCYTIAL VIRUS A (STRAIN A2); HOMO SAPIENS | homo sapiens | homo sapiens | human respiratory syncytial virus a (straina2) | McLellan, J.S., Gilman, M.S.A. | 3.3 | X-RAY DIFFRACTION | 0.259 | 0.212 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
6k5i | E | F | 0 | B | protein | null | h(+)/cl(-) exchange transporter clca | MEMBRANE PROTEIN | 05/29/19 | Crystal structure of the E148D/R147A/F317A mutant CLC-ec1 in the presence of 20 mM NaBr | ESCHERICHIA COLI MS 117-3; MUS MUSCULUS | mus musculus | mus musculus | escherichia coli ms 117-3 | Park, K., Lim, H.H. | 3.022 | X-RAY DIFFRACTION | 0.264 | 0.210 | false | true | IGHV4 | IGKV4 | Kappa | null | null | null | null | null |
6mub | M | K | 0 | M | carbohydrate | BMA | polysaccharide | IMMUNE SYSTEM | 10/22/18 | Anti-HIV-1 Fab 2G12 + Man5 re-refinement | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Wilson, I.A., Calarese, D.A., Stanfield, R.L. | 2.503 | X-RAY DIFFRACTION | 0.280 | 0.245 | false | true | unknown | IGKV1 | Kappa | 0 | -9.549709 | Unknown | null | TBD |
7mjj | F | G | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN/Immune System | 04/20/21 | Cryo-EM structure of the SARS-CoV-2 N501Y mutant spike protein ectodomain bound to Fab ab1 (class 1) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; SYNTHETIC CONSTRUCT | synthetic construct | synthetic construct | severe acute respiratory syndrome coronavirus2 | Zhu, X., Mannar, D., Srivastava, S.S., Berezuk, A.M., Demers, J.P., Saville, J.W., Leopold, K., Li, W., Dimitrov, D.S., Tuttle, K.S., Zhou, S., Chittori, S., Subramaniam, S. | 3.32 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
7jv4 | F | G | 0 | C | protein | null | sars-cov-2 spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 08/20/20 | SARS-CoV-2 spike in complex with the S2H13 neutralizing antibody (one RBD open) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Park, Y.J., Tortorici, M.A., Walls, A.C., Czudnochowski, N., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G., Veesler, D. | 3.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV7 | Lambda | null | null | null | null | null |
6pzz | K | J | 0 | D | protein | null | neuraminidase | VIRAL PROTEIN/IMMUNE SYSTEM | 08/01/19 | CryoEM derived model of NA-80 Fab in complex with N9 Shanghai2 | INFLUENZA A VIRUS (A/ENVIRONMENT/SHANGHAI/S1439/2013(H7N9)); HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus(a/environment/shanghai/s1439/2013(h7n9)) | Ward, A.B., Turner, H.L., Zhu, X. | 3.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
5vzy | H | L | 0 | A | peptide | null | amyloid beta a4 protein | IMMUNE SYSTEM | 05/29/17 | Crystal structure of crenezumab Fab in complex with Abeta | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Ultsch, M., Wang, W. | 2.32 | X-RAY DIFFRACTION | 0.249 | 0.206 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -11.589049 | Unknown | null | TBD |
6u6m | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 08/30/19 | Crystal structure of a vaccine-elicited anti-HIV-1 rhesus macaque antibody DH840.1 | MACACA MULATTA | macaca mulatta | macaca mulatta | null | Chen, W.-H., Choe, M., Saunders, K.O., Joyce, M.G. | 2.683 | X-RAY DIFFRACTION | 0.270 | 0.220 | false | true | IGHV4 | IGKV3 | Kappa | null | null | null | null | null |
6emj | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 10/02/17 | FAB Fragment. AbVance: Increasing our knowledge of antibody structural space to enable faster and better decision making in antibody drug discovery | HOMO SAPIENS | homo sapiens | homo sapiens | null | Benz, J., Weigand, S., Dengl, S., Schlothauer, T., Auer, J., Ehler, A., Kettenberger, H., Lorenz, S., Hirschheydt, T., Georges, G. | 2.3 | X-RAY DIFFRACTION | 0.211 | 0.165 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
7sfx | C | D | 0 | F | peptide | null | cd99 antigen peptide | IMMUNE SYSTEM | 10/04/21 | 10A1 Fab in complex with CD99 peptide | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | homo sapiens | Romero, L.A., Hattori, T., Koide, S. | 3.1 | X-RAY DIFFRACTION | 0.248 | 0.226 | false | true | IGHV6 | IGLV3 | Lambda | null | null | null | null | null |
6urm | H | L | 0 | F | protein | null | hemagglutinin | IMMUNE SYSTEM/VIRAL PROTEIN | 10/23/19 | Crystal structure of vaccine-elicited receptor-binding site targeting antibody LPAF-a.01 in complex with Hemagglutinin H1 A/California/04/2009 | INFLUENZA A VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus | Zhou, T., Cheung, S.F., Kwong, P.D. | 2.65 | X-RAY DIFFRACTION | 0.262 | 0.215 | false | true | IGHV2 | IGLV3 | Lambda | null | null | null | null | null |
4pir | G | null | 0 | A | protein | null | 5-hydroxytryptamine receptor 3a | TRANSPORT PROTEIN | 05/09/14 | X-ray structure of the mouse serotonin 5-HT3 receptor | MUS MUSCULUS; LAMA GLAMA | lama glama | null | mus musculus | Hassaine, G., Deluz, C., Grasso, L., Wyss, R., Tol, M.B., Hovius, R., Graff, A., Stahlberg, H., Tomizaki, T., Desmyter, A., Moreau, C., Li, X.-D., Poitevin, F., Vogel, H., Nury, H. | 3.5 | X-RAY DIFFRACTION | 0.257 | 0.217 | false | true | IGHV1 | null | null | null | null | null | null | null |
2lve | null | A | 0 | null | null | null | null | IMMUNOGLOBULIN | 05/13/98 | RECOMBINANT LEN | HOMO SAPIENS | null | homo sapiens | null | Schiffer, M., Pokkuluri, P.R. | 2.7 | X-RAY DIFFRACTION | 0.263 | 0.214 | false | true | unknown | unknown | unknown | null | null | null | null | null |
6qd8 | H | L | 0 | F | E | protein | protein | NA | NA | envelope glycoprotein | envelope glycoprotein,virion spike glycoprotein,ebov-gp1 | VIRAL PROTEIN | 01/01/19 | EM structure of a EBOV-GP bound to 4M0368 neutralizing antibody | HOMO SAPIENS; EBOLA VIRUS | homo sapiens | homo sapiens | ebola virus | ebola virus | Diskin, R., Cohen-Dvashi, H. | 3.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
6xjy | C | D | 0 | B | nucleic-acid | null | self-alkylating ribozyme (58-mer) | RNA/IMMUNE SYSTEM | 06/24/20 | Crystal structure of a self-alkylating ribozyme - short time incubation with the epoxide substrate | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | aeropyrum pernix | Koirala, D., Piccirilli, J.A. | 2.156 | X-RAY DIFFRACTION | 0.285 | 0.227 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
4krn | A | null | 0 | null | null | null | null | IMMUNE SYSTEM | 05/16/13 | Nanobody/VHH domain EgA1 | LAMA GLAMA | lama glama | null | null | Ferguson, K.M., Schmitz, K.R. | 1.553 | X-RAY DIFFRACTION | 0.226 | 0.199 | false | true | IGHV1 | null | null | null | null | null | null | null |
7me7 | B | null | 0 | R | protein | null | spike protein s1 | VIRAL PROTEIN/Immune System | 04/06/21 | CryoEM structure of SARS-CoV-2 RBD in complex with nanobodies Nb17 and Nb105 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; LAMA GLAMA | lama glama | null | severe acute respiratory syndrome coronavirus2 | Huang, W., Taylor, D.J. | 3.73 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
2jb6 | B | A | 0 | B | Hapten | T5C | 2-{(1E,3Z,5E,7E)-7-[3,3-DIMETHYL-5-SULFO-1-(2-SULFOETHYL)-1,3-DIHYDRO-2H-INDOL-2-YLIDENE]-4-METHYLHEPTA-1,3,5-TRIEN-1-YL}-3,3-DIMETHYL-5-SULFO-1-(2-SULFOETHYL)-3H-INDOLIUM | IMMUNE SYSTEM | 12/03/06 | Fab fragment in complex with small molecule hapten, crystal form-2 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Hillig, R.C., Baesler, S., Malawski, G., Badock, V., Bahr, I., Schirner, M., Licha, K. | 2.85 | X-RAY DIFFRACTION | 0.282 | 0.229 | false | true | IGHV1 | IGLV2 | Lambda | 0 | -14.950215 | Unknown | null | TBD |
7mlv | null | K | 0 | D | protein | null | glycine receptor alpha 1 | MEMBRANE PROTEIN, SIGNALING PROTEIN | 04/29/21 | Cryo-EM reveals partially and fully assembled native glycine receptors,homomeric tetramer | RATTUS NORVEGICUS; SUS SCROFA | null | rattus norvegicus | sus scrofa | Zhu, H., Gouaux, E. | 4.1 | ELECTRON MICROSCOPY | null | null | false | true | null | IGKV6 | Kappa | null | null | null | null | null |
7wuh | K | L | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 02/08/22 | SARS-CoV-2 Spike in complex with Fab of m31A7 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Chen, X., Wu, Y.-M. | 4.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
7shy | K | L | 0 | H | protein | null | ige fc | IMMUNE SYSTEM | 10/11/21 | IgE-Fc in complex with omalizumab scFv | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Pennington, L.F., Jardetzky, T.J., Kleinboelting, S. | 3.0 | X-RAY DIFFRACTION | 0.230 | 0.173 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6zdg | H | L | 0 | E | protein | null | spike glycoprotein | VIRAL PROTEIN | 06/14/20 | Association of three complexes of largely structurally disordered Spike ectodomain with bound EY6A Fab | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Duyvesteyn, H.M.E., Zhou, D., Zhao, Y., Fry, E.E., Ren, J., Stuart, D.I. | 4.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
4b41 | B | null | 0 | null | null | null | null | IMMUNE SYSTEM | 07/27/12 | Crystal structure of an amyloid-beta binding single chain antibody G7 | LAMA GLAMA | lama glama | null | null | Beringer, D.X., Dorresteijn, B., Rutten, L., Wienk, H., el Khattabi, M., Kroon-Batenburg, L.M.J., Verrips, C.T. | 1.191 | X-RAY DIFFRACTION | 0.1619 | 0.1360 | false | true | IGHV1 | null | null | null | null | null | null | null |
3rjq | B | null | 0 | A | protein | null | c186 gp120 | Viral Protein/Immune system | 04/15/11 | Crystal structure of anti-HIV llama VHH antibody A12 in complex with C186 gp120 | HUMAN IMMUNODEFICIENCY VIRUS TYPE 1; LAMA GLAMA | lama glama | null | human immunodeficiency virus type 1 | Chen, L., McLellan, J.S., Kwon, Y.D., Schmidt, S., Wu, X., Zhou, T., Yang, Y., Zhang, B., Forsman, A., Weiss, R.A., Verrips, T., Mascola, J., Kwong, P.D. | 2.601 | X-RAY DIFFRACTION | 0.299 | 0.255 | false | true | IGHV1 | null | null | null | null | null | null | null |
2w0l | null | B | 0 | null | null | null | null | IMMUNE SYSTEM | 08/19/08 | CRYSTAL STRUCTURE OF THE MUTANT H8P FROM THE RECOMBINANT VARIABLE DOMAIN 6JAL2 | HOMO SAPIENS | null | homo sapiens | null | RUDINO-PINERA, E., GONZALEZRUBIO-GARRIDO, P., HORJALES, E. | 2.2 | X-RAY DIFFRACTION | 0.245 | 0.206 | false | false | null | IGLV6 | Lambda | null | null | null | null | null |
7po5 | H | L | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 09/08/21 | Human coronavirus OC43 spike glycoprotein ectodomain in complex with the 47C9 antibody Fab fragment | HOMO SAPIENS; HUMAN CORONAVIRUS OC43 | homo sapiens | homo sapiens | human coronavirus oc43 | Hurdiss, D.L. | 3.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV3 | Kappa | null | null | null | null | null |
2x7l | G | I | 0 | M | protein | null | hiv rev | IMMUNE SYSTEM | 03/01/10 | Implications of the HIV-1 Rev dimer structure at 3.2A resolution for multimeric binding to the Rev response element | UNCLASSIFIED; HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 BH10 | unclassified | unclassified | human immunodeficiency virus type 3 | DiMattia, M.A., Watts, N.R., Stahl, S.J., Rader, C., Wingfield, P.T., Stuart, D.I., Steven, A.C., Grimes, J.M. | 3.17 | X-RAY DIFFRACTION | 0.2500 | 0.2337 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6p60 | A | B | 0 | E | peptide | null | hiv fusion peptide residue 512-519 | IMMUNE SYSTEM | 06/03/20 | Vaccine-elicited NHP FP-targeting neutralizing antibody A12V163-a.02 in complex with HIV fusion peptide (residue 512-519) | PLATYRRHINI; SYNTHETIC CONSTRUCT | platyrrhini | platyrrhini | human immunodeficiency virus 1 | Xu, K., Liu, K., Kwong, P.D. | 2.498 | X-RAY DIFFRACTION | 0.209 | 0.197 | false | true | IGHV4 | IGLV1 | Lambda | null | null | null | null | null |
4m6n | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 08/09/13 | Crystal structure of anti-IL-23 antibody CNTO1959 at pH 6.5 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Teplyakov, A., Obmolova, G., Gilliland, G.L. | 2.0 | X-RAY DIFFRACTION | 0.230 | 0.180 | false | true | IGHV5 | IGLV1 | Lambda | null | null | null | null | null |
6lkt | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 06/17/20 | Crystal structure of the Fab fragment of murine monoclonal antibody KH-1 against Human herpesvirus 6B | MUS MUSCULUS | mus musculus | mus musculus | null | Nishimura, M., Novita, B.D., Kato, T., Tjan, L.H., Wang, B., Wakata, A., Poetranto, A.L., Kawabata, A., Tang, H., Aoshi, T., Mori, Y. | 1.8 | X-RAY DIFFRACTION | 0.196 | 0.165 | false | false | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
7o85 | null | Q | 0 | P | R | protein | protein | NA | NA | protective antigen pa-63 | fab | TOXIN | 04/14/21 | Anthrax toxin prepore in complex with the neutralizing Fab cAb29 | BACILLUS ANTHRACIS; MUS MUSCULUS | null | mus musculus | bacillus anthracis | mus musculus | Hoelzgen, F., Zalk, R., Alcalay, R., Cohen-Schwartz, S., Garau, G., Shahar, A., Mazor, O., Frank, G.A. | 3.3 | ELECTRON MICROSCOPY | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null |
7bq5 | H | L | 0 | A | protein | null | envelope protein | VIRAL PROTEIN/IMMUNE SYSTEM | 03/24/20 | ZIKV sE bound to mAb Z6 | ZIKA VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | zika virus | Dai, L., Qi, J., Gao, G.F. | 2.99 | X-RAY DIFFRACTION | 0.275 | 0.261 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
6ot1 | J | K | 0 | E | protein | null | bg505 gp120 | IMMUNE SYSTEM | 05/02/19 | Cryo-EM structure of vaccine-elicited antibody 0PV-b.01 in complex with HIV-1 Env BG505 DS-SOSIP and antibodies VRC03 and PGT122 | HUMAN IMMUNODEFICIENCY VIRUS 1; MACACA MULATTA; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Gorman, J., Kwong, P.D. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV3 | Kappa | null | null | null | null | null |
2ht3 | E | F | 0 | B | protein | null | h(+)/cl(-) exchange transporter clca | MEMBRANE PROTEIN | 07/25/06 | Structure of the Escherichia coli ClC chloride channel Y445L mutant and Fab complex | ESCHERICHIA COLI; MUS MUSCULUS | mus musculus | mus musculus | escherichia coli | Accardi, A., Lobet, S., Williams, C., Miller, C., Dutzler, R. | 3.3 | X-RAY DIFFRACTION | 0.269 | 0.253 | false | false | IGHV4 | IGKV4 | Kappa | null | null | null | null | null |
6xq0 | B | C | 0 | A | protein | null | hemagglutinin | VIRAL PROTEIN/IMMUNE SYSTEM | 07/09/20 | Human antibody S8V2-18 in complex with the influenza hemagglutinin head domain of A/California/7/2009(NYMC-X181)(H1N1) | INFLUENZA A VIRUS (A/REASSORTANT/NYMC X-181A(A/NYMC X-157 X CALIFORNIA/07/2009)(H1N1)); HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus (a/reassortant/nymc x-181a(a/nymc x-157 x california/07/2009)(h1n1)) | McCarthy, K.R., Harrison, S.C. | 2.3 | X-RAY DIFFRACTION | 0.268 | 0.222 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
5vke | A | B | 0 | C | protein | null | ph-gated potassium channel kcsa | IMMUNE SYSTEM/TRANSPORT PROTEIN | 04/21/17 | Open conformation of KcsA deep-inactivated | STREPTOMYCES LIVIDANS; MUS MUSCULUS | mus musculus | mus musculus | streptomyces lividans | Cuello, L.G., Perozo, E., Cortes, D.M. | 2.37 | X-RAY DIFFRACTION | 0.228 | 0.196 | false | false | IGHV1 | IGKV5 | Kappa | null | null | null | null | null |
7n0g | Z | null | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN | 05/25/21 | CryoEm structure of SARS-CoV-2 spike protein (S-6P, 1-up) in complex with sybodies (Sb45) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; SYNTHETIC CONSTRUCT | synthetic construct | null | severe acute respiratory syndrome coronavirus2 | Jiang, J., Huang, R., Margulies, D. | 3.02 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
3mug | D | C | 0 | C | carbohydrate | NAG | polysaccharide | IMMUNE SYSTEM | 05/03/10 | Crystal structure of human Fab PG16, a broadly reactive and potent HIV-1 neutralizing antibody | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Pejchal, R., Walker, L.M., Burton, D.R., Wilson, I.A. | 2.49 | X-RAY DIFFRACTION | 0.248 | 0.207 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
6j5f | H | L | 0 | A | protein | null | envelope protein | VIRAL PROTEIN/IMMUNE SYSTEM | 01/10/19 | Complex structure of MAb 4.2-scFv with tick-borne encephalitis virus envelope protein Domain III | TICK-BORNE ENCEPHALITIS VIRUS; MUS MUSCULUS | mus musculus | mus musculus | tick-borne encephalitis virus | Yang, X., Qi, J., Peng, R., Dai, L., Gould, E.A., Tien, P., Gao, G.F. | 1.801 | X-RAY DIFFRACTION | 0.192 | 0.179 | false | true | IGHV1 | IGKV12 | Kappa | null | null | null | null | null |
6osv | H | L | 0 | K | protein | null | tyrosine-protein kinase transmembrane receptor ror2 | immune sytem/transferase | 04/01/20 | Potent and Selective Antitumor Antibody Targeting a Membrane-Proximal Epitope of ROR2 | ORYCTOLAGUS CUNICULUS; HOMO SAPIENS | oryctolagus cuniculus | oryctolagus cuniculus | homo sapiens | Park, H., Rader, C. | 1.34 | X-RAY DIFFRACTION | 0.189 | 0.162 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
1yzz | A | null | 0 | null | null | null | null | UNKNOWN FUNCTION | 03/01/05 | Humanized caban33 at room temperature | CAMELUS DROMEDARIUS | camelus dromedarius | null | null | Conrath, K., Vincke, C., Stijlemans, B., Schymkowitz, J., Decanniere, K., Muyldermans, S., Loris, R. | 2.7 | X-RAY DIFFRACTION | 0.293 | 0.233 | false | true | IGHV1 | null | null | null | null | null | null | null |
6fys | G | null | 0 | null | null | null | null | VIRAL PROTEIN | 03/12/18 | Structure of single domain antibody SD83 | LAMA GLAMA | lama glama | null | null | Laursen, N.S., Wilson, I.A. | 2.0 | X-RAY DIFFRACTION | 0.231 | 0.201 | false | true | IGHV1 | null | null | null | null | null | null | null |
7r1z | C | null | 0 | A | protein | null | activity-regulated cytoskeleton-associated protein | SIGNALING PROTEIN | 02/03/22 | C-terminal domain of hArc in complex with nanobodies H11 and C11, collapsed crystal form | VICUGNA PACOS; RATTUS NORVEGICUS | vicugna pacos | null | rattus norvegicus | Markusson, S., Kursula, P. | 1.94 | X-RAY DIFFRACTION | 0.243 | 0.197 | false | true | IGHV1 | null | null | null | null | null | null | null |
5vod | H | L | 0 | C | E | protein | protein | NA | NA | envelope glycoprotein ul128 | envelope glycoprotein ul131a | Viral Protein/Immune System | 05/02/17 | Crystal structure of HCMV Pentamer in complex with neutralizing antibody 9I6 | HUMAN CYTOMEGALOVIRUS (STRAIN MERLIN); HOMO SAPIENS; HUMAN CYTOMEGALOVIRUS; HUMAN CYTOMEGALOVIRUS (STRAIN AD169); HUMAN CYTOMEGALOVIRUS (STRAIN 5508) | homo sapiens | homo sapiens | human cytomegalovirus (strain ad169) | human cytomegalovirus (strain merlin) | Malito, E., Chandramouli, S. | 5.9 | X-RAY DIFFRACTION | 0.299 | 0.258 | false | true | IGHV5 | IGKV2 | Kappa | null | null | null | null | null |
1a6v | I | M | 0 | I | Hapten | NPC | 4-HYDROXY-3-NITROPHENYLACETYL-EPSILON-AMINOCAPROIC ACID ANION | IMMUNOGLOBULIN | 03/03/98 | B1-8 FV FRAGMENT COMPLEXED WITH A (4-HYDROXY-3-NITROPHENYL) ACETATE COMPOUND | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Simon, T., Henrick, K., Hirshberg, M., Winter, G. | 1.8 | X-RAY DIFFRACTION | unknown | 0.296 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
5u0u | C | c | 0 | null | null | null | null | IMMUNE SYSTEM | 11/27/16 | Crystal Structure of DH270.1 (unliganded, single-chain Fv) from the DH270 Broadly Neutralizing N332-glycan Dependent Lineage | HOMO SAPIENS | homo sapiens | null | null | Fera, D., Harrison, S.C. | 3.428 | X-RAY DIFFRACTION | 0.282 | 0.254 | true | true | unknown | unknown | unknown | null | null | null | null | null |
7jvr | E | e | 0 | A | C | B | protein | protein | protein | NA | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(o) subunitgamma-2 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | SIGNALING PROTEIN | 08/22/20 | Cryo-EM structure of Bromocriptine-bound dopamine receptor 2 in complex with Gi protein | ESCHERICHIA COLI; HOMO SAPIENS; SYNTHETIC CONSTRUCT | synthetic construct | null | homo sapiens | homo sapiens | homo sapiens | Zhuang, Y., Xu, P., Mao, C., Wang, L., Krumm, B., Zhou, X.E., Huang, S., Liu, H., Cheng, X., Huang, X.-P., Sheng, D.-D., Xu, T., Liu, Y.-F., Wang, Y., Guo, J., Jiang, Y., Jiang, H., Melcher, K., Roth, B.L., Zhang, Y., Zhang, C., Xu, H.E. | 2.8 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
6iec | J | K | 0 | I | protein | null | nsmgngc | STRUCTURAL PROTEIN/IMMUNE SYSTEM | 04/10/19 | Structure of RVFV Gn and human monoclonal antibody R17 | RIFT VALLEY FEVER VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | rift valley fever virus | Wang, Q.H., Wu, Y., Gao, F., Qi, J.X., Gao, G.F. | 3.2 | X-RAY DIFFRACTION | 0.281 | 0.241 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
4yo0 | A | B | 0 | E | peptide | null | pa14 peptide | IMMUNE SYSTEM | 03/11/15 | Crystal structure of monoclonal anti-human podoplanin antibody NZ-1 with bound PA peptide | RATTUS NORVEGICUS; SYNTHETIC CONSTRUCT | rattus norvegicus | rattus norvegicus | homo sapiens | Fujii, Y., Kitago, Y., Arimori, T., Takagi, J. | 1.56 | X-RAY DIFFRACTION | 0.214 | 0.179 | false | true | IGHV5 | IGLV3 | Lambda | null | null | null | null | null |
3qxu | C | null | 0 | null | null | null | null | IMMUNE SYSTEM | 03/02/11 | Free Structure of an Anti-Methotrexate CDR1-3 Graft VHH Antibody | LAMA GLAMA | lama glama | null | null | Fanning, S.W., Horn, J.R. | 1.8 | X-RAY DIFFRACTION | 0.214 | 0.182 | false | true | IGHV1 | null | null | null | null | null | null | null |
7lzp | H | null | 0 | D | protein | null | botulinum neurotoxin a light chain | ANTITOXIN | 03/10/21 | LC/A-JPU-B9-JPU-A11-JPU-G11 | CLOSTRIDIUM BOTULINUM; VICUGNA PACOS | vicugna pacos | null | clostridium botulinum | Lam, K., Jin, R. | 2.86 | X-RAY DIFFRACTION | 0.273 | 0.235 | false | true | unknown | unknown | unknown | null | null | null | null | null |
2i9l | D | C | 0 | J | protein | null | virion membrane protein m25 | IMMUNE SYSTEM/VIRAL PROTEIN | 09/05/06 | Structure of Fab 7D11 from a neutralizing antibody against the poxvirus L1 protein | VACCINIA VIRUS; MUS MUSCULUS | mus musculus | mus musculus | vaccinia virus | Su, H.P., Golden, J.W., Gittis, A.G., Moss, B., Hooper, J.W., Garboczi, D.N. | 3.1 | X-RAY DIFFRACTION | 0.259 | 0.240 | false | false | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
6eqc | F | f | 0 | C | protein | null | hexon protein | VIRAL PROTEIN | 10/12/17 | Cryo-EM reconstruction of a complex of a binding protein and human adenovirus C5 hexon | MUS MUSCULUS; HUMAN ADENOVIRUS 5 | mus musculus | null | human adenovirus 5 | Schmid, M., Ernst, P., Honegger, A., Suomalainen, M., Zimmermann, M., Braun, L., Stauffer, S., Thom, C., Dreier, B., Eibauer, M., Kipar, A., Vogel, V., Greber, U.F., Medalia, O., Plueckthun, A. | 7.4 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
5vob | H | L | 0 | D | B | protein | protein | NA | NA | envelope glycoprotein ul130 | envelope glycoprotein l | Viral Protein/Immune System | 05/02/17 | Crystal structure of HCMV Pentamer in complex with neutralizing antibody 8I21 | HOMO SAPIENS; HUMAN CYTOMEGALOVIRUS (STRAIN AD169); HUMAN CYTOMEGALOVIRUS (STRAIN 5508); HUMAN CYTOMEGALOVIRUS; HUMAN CYTOMEGALOVIRUS (STRAIN MERLIN) | homo sapiens | homo sapiens | human cytomegalovirus (strain merlin) | human cytomegalovirus (strain 5508) | Malito, E., Chandramouli, S. | 3.02 | X-RAY DIFFRACTION | 0.237 | 0.190 | false | true | IGHV3 | IGKV3 | Kappa | 0 | -13.402209 | SPR | null | TBD |
6n5e | G | F | 0 | B | protein | null | hemagglutinin | VIRAL PROTEIN/IMMUNE SYSTEM | 11/21/18 | Broadly protective antibodies directed to a subdominant influenza hemagglutinin epitope | INFLUENZA A VIRUS; MUS MUSCULUS | influenza a virus | mus musculus | influenza a virus | Bajic, G., Schmidt, A.G. | 3.0 | X-RAY DIFFRACTION | 0.287 | 0.250 | false | true | IGHV5 | IGLV1 | Lambda | null | null | null | null | null |
5hyq | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 02/01/16 | Cetuximab Fab in complex with amidated meditope | MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT | mus musculus, homo sapiens | mus musculus, homo sapiens | null | Bzymek, K.P., Williams, J.C. | 2.477 | X-RAY DIFFRACTION | 0.208 | 0.166 | false | true | IGHV2 | IGKV5 | Kappa | 0 | -9.309477 | Unknown | null | TBD |
6x40 | J | I | 0 | B | protein | null | gamma-aminobutyric acid receptor subunit alpha-1 | MEMBRANE PROTEIN | 05/21/20 | Human GABAA receptor alpha1-beta2-gamma2 subtype in complex with GABA plus picrotoxin | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Kim, J.J., Gharpure, A., Teng, J., Zhuang, Y., Howard, R.J., Zhu, S., Noviello, C.M., Walsh, R.M., Lindahl, E., Hibbs, R.E. | 2.86 | ELECTRON MICROSCOPY | null | null | false | false | IGHV14 | IGKV6 | Kappa | null | null | null | null | null |
7ldj | G | null | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 01/13/21 | SARS-CoV-2 receptor binding domain in complex with WNb-2 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; VICUGNA PACOS | vicugna pacos | null | severe acute respiratory syndrome coronavirus2 | Pymm, P., Dietrich, M.H., Tan, L.L., Adair, A., Tham, W.H. | 2.36 | X-RAY DIFFRACTION | 0.268 | 0.210 | false | true | IGHV1 | null | null | null | null | null | null | null |
4u7s | B | null | 0 | null | null | null | null | IMMUNE SYSTEM | 07/31/14 | Homodimeric Single Domain Antibody (sdAb) against Staphylococcal enterotoxin B (SEB) Crystallized for 5 months | LAMA GLAMA | lama glama | null | null | Legler, P.M. | 2.07 | X-RAY DIFFRACTION | 0.242 | 0.232 | false | true | IGHV1 | null | null | null | null | null | null | null |
6fy3 | H | L | 0 | P | peptide | null | cap45 v2 peptide | IMMUNE SYSTEM | 03/10/18 | Crystal structure of a V2-directed, RV144 vaccine-like antibody from HIV-1 infection, CAP228-3D, bound to a heterologous V2 peptide | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Wibmer, C.K., Moore, P.L., Morris, L. | 2.6 | X-RAY DIFFRACTION | 0.250 | 0.220 | false | true | IGHV5 | IGLV6 | Lambda | null | null | null | null | null |
6uy3 | A | a | 0 | a | Hapten | MTX | METHOTREXATE | ANTITUMOR PROTEIN | 11/11/19 | Structure of anti-hCD33 conditional scFv with methotrexate | CAMELIDAE MIXED LIBRARY | camelidae mixed library | null | null | Kimberlin, C.R., Park, S. | 2.0 | X-RAY DIFFRACTION | 0.221 | 0.189 | true | true | unknown | unknown | unknown | null | null | null | null | null |
2r1w | B | A | 0 | B | carbohydrate | KDA | (3-DEOXY-D-MANNO-OCT-2-ULOSONIC ACID)-2-O-ALLYL | IMMUNE SYSTEM | 08/23/07 | Crystal structure of S25-2 Fab in complex with Kdo analogues | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Brooks, C.L., Evans, S.V. | 1.7 | X-RAY DIFFRACTION | 0.246 | 0.219 | false | false | IGHV7 | IGKV8 | Kappa | 0.000025 | -6.278333 | Unknown | null | TBD |
7c8v | A | null | 0 | B | protein | null | spike glycoprotein | PROTEIN BINDING | 06/03/20 | Structure of sybody SR4 in complex with the SARS-CoV-2 S Receptor Binding domain (RBD) | SYNTHETIC CONSTRUCT; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | synthetic construct | null | severe acute respiratory syndrome coronavirus2 | Li, T., Yao, H., Cai, H., Qin, W., Li, D. | 2.15 | X-RAY DIFFRACTION | 0.224 | 0.184 | false | true | IGHV1 | null | null | null | null | null | null | null |
7eh5 | D | O | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 03/28/21 | Cryo-EM structure of SARS-CoV-2 S-D614G variant in complex with neutralizing antibodies, RBD-chAb15 and RBD-chAb45 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Yang, T.J., Yu, P.Y., Chang, Y.C., Wu, H.C., Hsu, S.T.D. | 4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV2 | IGKV5 | Kappa | null | null | null | null | null |
2gfb | H | G | 0 | null | null | null | null | IMMUNOGLOBULIN | 07/07/94 | CRYSTAL STRUCTURE OF A CATALYTIC FAB HAVING ESTERASE-LIKE ACTIVITY | MUS MUSCULUS | mus musculus | mus musculus | null | Golinelli-Pimpaneau, B., Knossow, M. | 3.0 | X-RAY DIFFRACTION | unknown | 0.213 | false | false | IGHV5 | IGKV9 | Kappa | null | null | null | null | null |
7eo2 | E | e | 0 | B | C | protein | protein | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 04/21/21 | Cryo-EM of Sphingosine 1-phosphate receptor 1 / Gi complex bound to FTY720p | HOMO SAPIENS | homo sapiens | null | homo sapiens | homo sapiens | He, Y., Xu, Z., Ikuta, T. | 2.89 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
5mp5 | A | B | 0 | K | peptide | null | microtubule-associated protein tau | IMMUNE SYSTEM | 12/15/16 | Crystal structure of DC8E8 Fab in the complex with a 14-mer tau peptide at pH 6.5 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | Skrabana, R., Novak, M. | 2.31 | X-RAY DIFFRACTION | 0.277 | 0.235 | false | false | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
3jwo | H | L | 0 | A | protein | null | hiv-1 gp120 envelope glycoprotein | VIRAL PROTEIN | 09/18/09 | Structure of HIV-1 gp120 with gp41-Interactive Region: Layered Architecture and Basis of Conformational Mobility | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Pancera, M., Majeed, S., Huang, C.C., Kwon, Y.D., Zhou, T., Robinson, J.E., Sodroski, J., Wyatt, R., Kwong, P.D. | 3.51 | X-RAY DIFFRACTION | 0.273 | 0.257 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
5d9q | H | L | 0 | G | protein | null | envelope glycoprotein gp120 | IMMUNE SYSTEM | 08/18/15 | Crystal Structure of the BG505 SOSIP gp140 HIV-1 Env trimer in Complex with the Broadly Neutralizing Fab PGT122 and scFv NIH45-46 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Julien, J.-P., Stanfield, R.L., Ward, A.B., Wilson, I.A. | 4.4 | X-RAY DIFFRACTION | 0.320 | 0.290 | false | true | IGHV4 | IGLV3 | Lambda | null | null | null | null | null |
7ws3 | I | H | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 01/28/22 | Structures of Omicron Spike complexes illuminate broad-spectrum neutralizing antibody development | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Guo, H., Gao, Y., Ji, X., Yang, H. | 3.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5fuz | H | L | 0 | null | null | null | null | null | 02/01/16 | Extending the half-life of a Fab fragment through generation of a humanised anti-Human Serum Albumin (HSA) Fv domain: an investigation into the correlation between affinity and serum half-life | HOMO SAPIENS | homo sapiens | homo sapiens | null | Adams, R., Ceska, T. | 2.68 | X-RAY DIFFRACTION | 0.2509 | 0.2119 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7k39 | L | K | 0 | E | F | protein | protein | NA | NA | hemagglutinin | hemagglutinin | VIRAL PROTEIN | 09/10/20 | Structure of full-length influenza HA with a head-binding antibody at pH 5.2, conformation A, neutral pH-like | INFLUENZA A VIRUS (STRAIN A/HONG KONG/1/1968 H3N2); HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus (strain a/hong kong/1/1968h3n2) | influenza a virus (strain a/hong kong/1/1968h3n2) | Gui, M., Gao, J., Xiang, Y. | 3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
7wro | H | L | 0 | R | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 01/27/22 | Local structure of BD55-3372 and delta spike | Homo sapiens; Severe acute respiratory syndrome coronavirus | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus | Liu, P.L. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
4yhk | H | L | 0 | H | Hapten | 4CC | N-[(2-{[(4-carbamimidoylphenyl)amino]methyl}-1-methyl-1H-benzimidazol-5-yl)carbonyl]-N-pyridin-2-yl-beta-alanine | IMMUNE SYSTEM | 02/27/15 | Reversal Agent for Dabigatran | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Schiele, F., Nar, H. | 2.21 | X-RAY DIFFRACTION | 0.234 | 0.174 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7mep | I | G | 0 | E | protein | null | bg505 sosipv5.2(7s) - gp120 | VIRAL PROTEIN | 04/07/21 | BG505 SOSIP.v5.2(7S) in complex with the monoclonal antibodies Rh.33172 mAb.1 and RM19R | MACACA MULATTA; HUMAN IMMUNODEFICIENCY VIRUS | macaca mulatta | macaca mulatta | human immunodeficiency virus | Antanasijevic, A., Ward, A.B. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV3 | Kappa | null | null | null | null | null |
7ldj | H | null | 0 | D | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 01/13/21 | SARS-CoV-2 receptor binding domain in complex with WNb-2 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; VICUGNA PACOS | vicugna pacos | null | severe acute respiratory syndrome coronavirus2 | Pymm, P., Dietrich, M.H., Tan, L.L., Adair, A., Tham, W.H. | 2.36 | X-RAY DIFFRACTION | 0.268 | 0.210 | false | true | IGHV1 | null | null | null | null | null | null | null |
7mf7 | C | D | 0 | null | null | null | null | IMMUNE SYSTEM | 04/08/21 | Crystal structure of antibody 10E8v4-P100gA Fab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Kwon, Y.D., Kwong, P.D. | 2.0 | X-RAY DIFFRACTION | 0.231 | 0.203 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
6w0b | A | B | 0 | C | protein | null | ph-gated potassium channel kcsa | MEMBRANE PROTEIN | 02/29/20 | Open-gate KcsA soaked in 2 mM BaCl2 | RATTUS NORVEGICUS; STREPTOMYCES LIVIDANS | rattus norvegicus | rattus norvegicus | streptomyces lividans | Rohaim, A., Gong, L., Li, J. | 3.604 | X-RAY DIFFRACTION | 0.236 | 0.190 | false | true | IGHV1 | IGKV5 | Kappa | null | null | null | null | null |
6vi1 | E | D | 0 | M | peptide | null | terminase, large subunit | IMMUNE SYSTEM | 01/11/20 | Structure of Fab4 bound to P22 TerL(1-33) | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | salmonella phage p22 | Cingolani, G., Lokareddy, R., Ko, Y. | 2.4 | X-RAY DIFFRACTION | 0.239 | 0.189 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7cw3 | m | n | 0 | T | S | protein | protein | NA | NA | capsid protein | capsid protein | VIRUS/IMMUNE SYSTEM | 08/27/20 | Cryo-EM structure of Chikungunya virus in complex with mAb CHK-263 IgG (subregion around icosahedral 2-fold vertex) | CHIKUNGUNYA VIRUS; MUS MUSCULUS | mus musculus | mus musculus | chikungunya virus | chikungunya virus | Zhou, Q.F., Fox, J.M., Earnest, J.T., Ng, T.S., Kim, A.S., Fibriansah, G., Kostyuchenko, V.A., Shu, B., Diamond, M.S., Lok, S.M. | 9.4 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV5 | Kappa | null | null | null | null | null |
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