pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 354
values | r_factor stringclasses 342
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
5xf1 | H | L | 0 | B | protein | null | glucagon receptor,endolysin,glucagon receptor | SIGNALING PROTEIN | 04/06/17 | Structure of the Full-length glucagon class B G protein-coupled receptor | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens, enterobacteria phage t4 | Zhang, H., Qiao, A., Yang, D., Yang, L., Dai, A., de Graaf, C., Reedtz-Runge, S., Dharmarajan, V., Zhang, H., Han, G.Y., Grant, T., Sierra, R., Weierstall, U., Nelson, G., Liu, W., Wu, Y., Ma, L., Cai, X., Lin, G., Wu, X., Geng, Z., Dong, Y., Song, G., Griffin, P., Lau, J., Cherezov, V., Yang, H., Hanson, M., Stevens, ... | 3.19 | X-RAY DIFFRACTION | 0.231 | 0.205 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5cba | A | B | 0 | E | protein | null | c-x-c motif chemokine 13 | IMMUNE SYSTEM | 06/30/15 | 3B4 in complex with CXCL13 - 3B4-CXCL13 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Tu, C., Bard, J., Mosyak, L. | 2.5 | X-RAY DIFFRACTION | 0.237 | 0.197 | true | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null |
6lz9 | H | L | 0 | B | protein | null | hepatocyte growth factor | IMMUNE SYSTEM | 02/18/20 | t8E4 antibody Fab complexed with the active form of HGF | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Kitago, Y., Umitsu, M., Takagi, J. | 2.8 | X-RAY DIFFRACTION | 0.298 | 0.248 | false | true | IGHV2 | IGKV10 | Kappa | null | null | null | null | null |
5jmo | C | null | 0 | A | protein | null | furin | Hydrolase/Antibody | 04/29/16 | X-ray structure of a protease-antibody complex | CAMELUS DROMEDARIUS; HOMO SAPIENS; SYNTHETIC CONSTRUCT | camelus dromedarius | null | homo sapiens | Dahms, S.O., Than, M.E. | 1.998 | X-RAY DIFFRACTION | 0.197 | 0.163 | false | true | IGHV3 | null | null | null | null | null | null | null |
7k7i | X | Y | 0 | E | protein | null | putative pertussis-like toxin subunit | TOXIN | 09/22/20 | Density-fitted Model Structure of Antibody Variable Domains of TyTx4 in Complex with PltB pentamer of Typhoid Toxin | SALMONELLA TYPHI; MUS MUSCULUS | mus musculus | mus musculus | salmonella typhi | Nguyen, T., Feathers, J.R., Fromme, J.C., Song, J. | 3.13 | ELECTRON MICROSCOPY | null | null | false | true | IGHV5 | IGKV5 | Kappa | null | null | null | null | null |
2ajx | H | L | 0 | L | Hapten | TGN | 3-(HYDROXY-PHENYL-PHOSPHINOYLOXY)-8-METHYL-8-AZA-BICYCLO[3.2.1]OCTANE-2-CARBOXYLIC ACID METHYL ESTER | IMMUNE SYSTEM | 08/02/05 | Crystal Structure of Cocaine catalytic Antibody 7A1 Fab' in Complex with Transition State Analog | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Zhu, X., Wilson, I.A. | 1.85 | X-RAY DIFFRACTION | 0.255 | 0.227 | false | false | IGHV3 | IGKV2 | Kappa | null | null | null | null | null |
2kh2 | B | b | 42 | A | protein | null | interleukin-1 beta | Cytokine/IMMUNE SYSTEM | 03/23/09 | Solution structure of a scFv-IL-1B complex | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | Wilkinson, I.C., Hall, C.J., Veverka, V., Muskett, F.W., Stephens, P.E., Taylor, R.J., Henry, A.J., Carr, M.D. | NOT | SOLUTION NMR | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
7cm4 | H | L | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 07/24/20 | Crystal Structure of COVID-19 virus spike receptor-binding domain complexed with a neutralizing antibody CT-P59 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Kim, Y.G., Jeong, J.H., Bae, J.S., Lee, J.H. | 2.71 | X-RAY DIFFRACTION | 0.242 | 0.217 | false | true | IGHV2 | IGLV1 | Lambda | null | null | null | null | null |
1ieh | A | null | 1 | null | null | null | null | IMMUNE SYSTEM | 04/09/01 | SOLUTION STRUCTURE OF A SOLUBLE SINGLE-DOMAIN ANTIBODY WITH HYDROPHOBIC RESIDUES TYPICAL OF A VL/VH INTERFACE | LAMA GLAMA | lama glama | null | null | Vranken, W., Tolkatchev, D., Xu, P., Tanha, J., Chen, Z., Narang, S., Ni, F. | NOT | SOLUTION NMR | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
6vzi | D | E | 0 | B | protein | null | envelope glycoprotein gp41 | VIRAL PROTEIN/IMMUNE SYSTEM | 02/28/20 | Crystal Structure of HIV-1 CAP256 RnS-3mut-2G-SOSIP.664 Prefusion Env Trimer in Complex with Human Antibodies 3H109L and 35O22 at 3.5 Angstrom | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Lai, Y.-T., Kwong, P.D. | 2.716 | X-RAY DIFFRACTION | 0.276 | 0.229 | false | true | unknown | unknown | unknown | null | null | null | null | null |
6uoe | H | L | 0 | P | peptide | null | envelope glycoprotein b | IMMUNE SYSTEM/VIRAL PROTEIN | 10/14/19 | 3-25 Fab germline-reversion variant bound to an HCMV gB-derived peptide | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human betaherpesvirus 5 | Wrapp, D., McLellan, J.S. | 1.8 | X-RAY DIFFRACTION | 0.186 | 0.160 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
6phg | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 06/25/19 | Predicted germline variant of human transmission blocking antibody 2544 | HOMO SAPIENS | homo sapiens | homo sapiens | null | McLeod, B.R., Julien, J.P. | 2.0 | X-RAY DIFFRACTION | 0.228 | 0.182 | false | true | IGHV3 | IGKV2 | Kappa | null | null | null | null | null |
7k9h | H | L | 0 | B | A | protein | protein | NA | NA | spike glycoprotein | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 09/29/20 | SARS-CoV-2 Spike in complex with neutralizing Fab 2B04 (one up, two down conformation) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS | mus musculus | mus musculus | severe acute respiratory syndrome coronavirus2 | severe acute respiratory syndrome coronavirus2 | Errico, J.M., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID) | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV2 | IGLV1 | Lambda | null | null | null | null | null |
2ez0 | E | F | 0 | B | protein | null | h(+)/cl(-) exchange transporter clca | MEMBRANE PROTEIN | 11/10/05 | Crystal structure of the S107A/E148Q/Y445A mutant of EcClC, in complex with a FaB fragment | ESCHERICHIA COLI; MUS MUSCULUS | mus musculus | mus musculus | escherichia coli | Lobet, S., Dutzler, R. | 3.54 | X-RAY DIFFRACTION | 0.296 | 0.258 | false | false | IGHV4 | IGKV4 | Kappa | null | null | null | null | null |
5n2k | L | K | 0 | null | null | null | null | IMMUNE SYSTEM | 02/07/17 | Structure of unbound Briakinumab FAb | HOMO SAPIENS | homo sapiens | homo sapiens | null | Bloch, Y., Savvides, S.N. | 2.219 | X-RAY DIFFRACTION | 0.234 | 0.204 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
4fqv | J | N | 0 | D | C | protein | protein | NA | NA | hemagglutinin ha2 | hemagglutinin ha1 | VIRAL PROTEIN/IMMUNE SYSTEM | 06/25/12 | Crystal structure of broadly neutralizing antibody CR9114 bound to H7 influenza hemagglutinin | INFLUENZA A VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus | influenza a virus | Ekiert, D.C., Dreyfus, C., Wilson, I.A. | 5.75 | X-RAY DIFFRACTION | 0.339 | 0.314 | false | true | IGHV1 | IGLV1 | Lambda | 0 | -12.221727 | BLI | null | TBD |
3bjl | null | A | 0 | null | null | null | null | IMMUNOGLOBULIN | 05/26/95 | LOC, A LAMBDA 1 TYPE LIGHT-CHAIN DIMER (BENCE-JONES PROTEIN) CRYSTALLIZED IN AMMONIUM SULFATE | HOMO SAPIENS | null | homo sapiens | null | Schiffer, M., Huang, D.B. | 2.3 | X-RAY DIFFRACTION | unknown | unknown | false | false | null | IGLV1 | Lambda | null | null | null | null | null |
2mkw | null | A | 17 | null | null | null | null | IMMUNE SYSTEM | 02/13/14 | Solution Structure of 6aJl2 and 6aJL2-R24G Amyloidogenics Light Chain Proteins | HOMO SAPIENS | null | homo sapiens | null | Amero, C., Maya-Martinez, R.C., Gil-Rodriguez, P.C. | NOT | SOLUTION NMR | null | null | false | true | null | IGLV6 | Lambda | null | null | null | null | null |
2kh2 | B | b | 33 | A | protein | null | interleukin-1 beta | Cytokine/IMMUNE SYSTEM | 03/23/09 | Solution structure of a scFv-IL-1B complex | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | Wilkinson, I.C., Hall, C.J., Veverka, V., Muskett, F.W., Stephens, P.E., Taylor, R.J., Henry, A.J., Carr, M.D. | NOT | SOLUTION NMR | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
5da4 | B | null | 0 | null | null | null | null | IMMUNE SYSTEM | 08/19/15 | Structure of a nanobody recognizing the fumarate transporter SLC26Dg | LAMA GLAMA | lama glama | null | null | Dutzler, R., Geertsma, E.R., Chang, Y., Shaik, F.R. | 2.4 | X-RAY DIFFRACTION | 0.242 | 0.233 | false | true | IGHV1 | null | null | null | null | null | null | null |
7te6 | G | H | 0 | F | E | protein | protein | NA | NA | glutamate receptor ionotropic, nmda 2b | glutamate receptor ionotropic, nmda 1 | SIGNALING PROTEIN/IMMUNE SYSTEM | 01/04/22 | Crystal structure of GluN1b-2B ATD complexed to Fab5 anti-GluN2B antibody | XENOPUS LAEVIS; RATTUS NORVEGICUS; MUS MUSCULUS | mus musculus | mus musculus | rattus norvegicus | xenopus laevis | Regan, M., Tajima, N., Furukawa, H. | 4.55 | X-RAY DIFFRACTION | 0.324 | 0.282 | false | false | IGHV5 | IGKV3 | Kappa | null | null | null | null | null |
6djp | E | F | 0 | B | protein | null | integrin beta-8 | MEMBRANE PROTEIN | 05/25/18 | Integrin alpha-v beta-8 in complex with the Fabs 8B8 and 68 | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Cormier, A., Campbell, M.G., Nishimura, S.L., Cheng, Y. | 4.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV10 | Kappa | null | null | null | null | null |
6cvk | A | a | 0 | C | protein | null | capsid protein | VIRAL PROTEIN/IMMUNE SYSTEM | 03/28/18 | Hepatitis B e-antigen in complex with scFv e13 | ORYCTOLAGUS CUNICULUS; HEPATITIS B VIRUS | oryctolagus cuniculus | null | hepatitis b virus | Eren, E., Steven, A.C., Wingfield, P.T. | 2.38 | X-RAY DIFFRACTION | 0.221 | 0.175 | true | true | unknown | unknown | unknown | null | null | null | null | null |
3cfj | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 03/04/08 | Crystal structure of catalytic elimination antibody 34E4, orthorhombic crystal form | MUS MUSCULUS, HOMO SAPIENS | mus musculus, homo sapiens | mus musculus, homo sapiens | null | Debler, E.W., Wilson, I.A. | 2.6 | X-RAY DIFFRACTION | 0.253 | 0.199 | false | true | IGHV4 | IGLV1 | Lambda | null | null | null | null | null |
5xcs | A | B | 0 | C | peptide | null | ha peptide | IMMUNE SYSTEM | 03/23/17 | Crystal structure of 12CA5 Fv-clasp fragment with its antigen peptide | MUS MUSCULUS; HOMO SAPIENS; SYNTHETIC CONSTRUCT | mus musculus, homo sapiens | mus musculus, homo sapiens | homo sapiens | Arimori, T., Takagi, J. | 2.2 | X-RAY DIFFRACTION | 0.244 | 0.208 | false | true | IGHV5 | IGKV8 | Kappa | null | null | null | null | null |
7rah | B | A | 0 | E | protein | null | bifunctional adenylate cyclase toxin/hemolysin cyaa,bifunctional adenylate cyclase toxin/hemolysin cyaa | IMMUNE SYSTEM/TOXIN | 07/01/21 | Adenylate cyclase toxin RTX domain fragment bound to M1H5 Fab and M2B10 Fab | MUS MUSCULUS; BORDETELLA PERTUSSIS | mus musculus | mus musculus | bordetella pertussis | Goldsmith, J.A., McLellan, J.S. | 2.6 | X-RAY DIFFRACTION | 0.218 | 0.195 | false | true | IGHV5 | IGKV10 | Kappa | null | null | null | null | null |
7zmo | K | null | 0 | A | protein | null | atp-dependent dna helicase q5 | HYDROLASE | 04/19/22 | Crystal structure of human RECQL5 helicase APO form in complex with engineered nanobody (Gluebody) G3-052 | Homo sapiens; Lama glama | lama glama | null | homo sapiens | Ye, M., Makola, M., Newman, J.A., Fairhead, M., MacLean, E., Krojer, T., Aitkenhead, H., Bountra, C., Gileadi, O., von Delft, F. | 3.75 | X-RAY DIFFRACTION | 0.306 | 0.283 | false | true | IGHV1 | null | null | null | null | null | null | null |
7n3i | H | L | 0 | C | protein | null | spike protein s1 | IMMUNE SYSTEM/VIRAL PROTEIN | 06/01/21 | Crystal structure of the SARS-CoV-2 receptor binding domain in complex with the human neutralizing antibody Fab fragment C098 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Flyak, A.I., Bjorkman, P.J., Barnes, C.O. | 2.03 | X-RAY DIFFRACTION | 0.208 | 0.179 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
5uk4 | o | null | 0 | O | protein | null | anti-vesicular stomatitis virus n vhh | Viral Protein/RNA/Immune System | 01/19/17 | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | VESICULAR STOMATITIS INDIANA VIRUS (STRAIN SAN JUAN); VICUGNA PACOS | vicugna pacos | null | vesicular stomatitis indiana virus (strain sanjuan) | Hanke, L., Knockenhauer, K.E., Ploegh, H.L., Schwartz, T.U. | 3.204 | X-RAY DIFFRACTION | 0.288 | 0.237 | false | false | IGHV1 | null | null | null | null | null | null | null |
2znw | B | b | 0 | Z | protein | null | lysozyme c | IMMUNE SYSTEM/HYDROLASE | 05/02/08 | Crystal Structure of ScFv10 in Complex with Hen Egg Lysozyme | MUS MUSCULUS; SYNTHETIC CONSTRUCT; GALLUS GALLUS | mus musculus, synthetic construct | null | gallus gallus | DeSantis, M.E., Acchione, M., Li, M., Walter, R.L., Wlodawer, A., Smith-Gill, S. | 2.71 | X-RAY DIFFRACTION | 0.250 | 0.193 | true | true | unknown | unknown | unknown | null | null | null | null | null |
6jfh | K | I | 0 | A | protein | null | zikv structural e protein | ANTIVIRAL PROTEIN | 04/10/19 | The asymmetric-reconstructed cryo-EM structure of Zika virus-FabZK2B10 complex | ZIKA VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | zika virus | Wang, L., Wang, R.K., Wang, L., Ben, H.J., Yu, L., Gao, F., Shi, X.L., Yin, C.B., Zhang, F.C., Xiang, Y., Zhang, L.Q. | 20 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
6feq | D | C | 0 | B | protein | null | atp-binding cassette sub-family g member 2 | MEMBRANE PROTEIN | 01/03/18 | Structure of inhibitor-bound ABCG2 | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Jackson, S.M., Manolaridis, I., Kowal, J., Zechner, M., Altmann, K.H., Locher, K.P. | 3.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV13 | Kappa | null | null | null | null | null |
7paf | C | null | 0 | A | protein | null | licb protein | TRANSPORT PROTEIN | 07/29/21 | Streptococcus pneumoniae choline importer LicB in lipid nanodiscs | SYNTHETIC CONSTRUCT; STREPTOCOCCUS PNEUMONIAE TIGR4 | synthetic construct | null | streptococcus pneumoniae tigr4 | Perez, C., Baerland, N. | 3.75 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
2c1p | B | A | 0 | B | Hapten | FNZ | 4-[(1S,2R)-3-(4-FLUOROPHENYL)-2-HYDROXY-1-(1H-1,2,4-TRIAZOL-1-YL)PROPYL]BENZONITRILE | IMMUNE SYSTEM | 09/19/05 | Fab-fragment of enantioselective antibody complexed with finrozole | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Parkkinen, T., Nevanen, T., Koivula, A., Rouvinen, J. | 2.0 | X-RAY DIFFRACTION | 0.2853 | 0.2302 | false | true | IGHV1 | IGKV1 | Kappa | 0.000004 | -7.364108 | Unknown | null | TBD |
6iyn | A | null | 2 | null | null | null | null | AFLATOXIN B1-BINDING PROTEIN | 12/17/18 | Solution structure of camelid nanobody Nb26 against aflatoxin B1 | VICUGNA PACOS | vicugna pacos | null | null | Nie, Y., He, T., Zhu, J., Li, S.L., Hu, R., Yang, Y.H. | NOT | SOLUTION NMR | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
4kkc | E | F | 0 | B | protein | null | h(+)/cl(-) exchange transporter clca | TRANSPORT PROTEIN | 05/05/13 | Structure of the E148A mutant of CLC-ec1 deltaNC construct in 20mM Bromide | MUS MUSCULUS; ESCHERICHIA COLI | mus musculus | mus musculus | escherichia coli | Lim, H.-H., Miller, C. | 3.18 | X-RAY DIFFRACTION | 0.264 | 0.231 | false | true | IGHV4 | IGKV4 | Kappa | null | null | null | null | null |
6kz0 | H | I | 0 | G | protein | null | genome polyprotein | VIRAL PROTEIN | 05/27/20 | HRV14 3C in complex with single chain antibody GGVV | HUMAN RHINOVIRUS 14; HOMO SAPIENS | homo sapiens | homo sapiens | human rhinovirus 14 | Meng, B., Yang, B., Wilson, I.A. | 2.4 | X-RAY DIFFRACTION | 0.223 | 0.185 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
4xmk | H | L | 0 | P | peptide | null | hiv-1 jr-fl gp120 v3 peptide | immune system/viral protein | 01/14/15 | Crystal structure of Fab of HIV-1 gp120 V3-specific human monoclonal antibody 2424 in complex with JR-FL V3 peptide | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Kong, X.-P., Pan, R. | 3.179 | X-RAY DIFFRACTION | 0.283 | 0.225 | false | true | IGHV3 | IGKV2 | Kappa | null | null | null | null | null |
7kfh | I | L | 0 | C | protein | null | virion spike glycoprotein 1 | VIRAL PROTEIN/IMMUNE SYSTEM | 10/13/20 | Ebola virus GP (mucin deleted, Makona strain) bound to antibody Fab EBOV-437 | EBOLA VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | ebola virus | Murin, C.D., Ward, A.B. | 3.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6cwt | C | D | 0 | F | protein | null | capsid protein | VIRAL PROTEIN/IMMUNE SYSTEM | 03/30/18 | Hepatitis B core-antigen in complex with Fab e21 | ORYCTOLAGUS CUNICULUS; HEPATITIS B VIRUS GENOTYPE D SUBTYPE ADW | oryctolagus cuniculus | oryctolagus cuniculus | hepatitis b virus genotype d subtype adw | Eren, E., Steven, A.C., Wingfield, P.T. | 3.151 | X-RAY DIFFRACTION | 0.283 | 0.231 | false | true | IGHV1 | IGKV1 | Kappa | 0 | -15.960251 | AUC | null | TBD |
7ey5 | B | C | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 05/29/21 | Local CryoEM structure of the SARS-CoV-2 S6PV2 in complex with BD-771 Fab and BD-821 Fab | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhang, Z.Y. | 3.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV5 | IGKV3 | Kappa | null | null | null | null | null |
6snh | H | L | 0 | X | protein | null | dolichyl pyrophosphate man9glcnac2 alpha-1,3-glucosyltransferase | MEMBRANE PROTEIN | 08/24/19 | Cryo-EM structure of yeast ALG6 in complex with 6AG9 Fab and Dol25-P-Glc | SACCHAROMYCES CEREVISIAE; SYNTHETIC CONSTRUCT | synthetic construct | synthetic construct | saccharomyces cerevisiae | Bloch, J.S., Pesciullesi, G., Boilevin, J., Nosol, K., Irobalieva, R.N., Darbre, T., Aebi, M., Kossiakoff, A.A., Reymond, J.L., Locher, K.P. | 3.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
1qbm | H | L | 0 | null | null | null | null | IMMUNOGLOBULIN | 05/01/98 | FAB E8B ANTIBODY, X-RAY STRUCTURE AT 2.37 ANGSTROMS RESOLUTION | MUS MUSCULUS | mus musculus | mus musculus | null | Mylvaganam, S.E., Paterson, Y., Getzoff, E.D. | 2.37 | X-RAY DIFFRACTION | 0.269 | 0.194 | false | false | IGHV14 | IGKV12 | Kappa | null | null | null | null | null |
4hkx | A | B | 0 | E | protein | null | hemagglutinin ha1 | VIRAL PROTEIN/IMMUNE SYSTEM | 10/15/12 | Influenza hemagglutinin in complex with CH67 Fab | INFLUENZA A VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus | Schmidt, A.G., Harrison, S.C. | 2.5 | X-RAY DIFFRACTION | 0.219 | 0.187 | false | true | IGHV1 | IGLV3 | Lambda | 0 | -8.790776 | SPR | null | TBD |
3hr5 | B | A | 0 | S | peptide | null | m1prime-derived peptide | IMMUNE SYSTEM | 06/08/09 | M1prime peptide from IgE bound by humanized antibody 47H4 Fab | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | null | Eigenbrot, C.W., Ultsch, M.H. | 2.4 | X-RAY DIFFRACTION | 0.253 | 0.213 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5v8m | S | U | 0 | G | protein | null | gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 03/22/17 | A broadly neutralizing antibody targets the dynamic HIV Envelope trimer apex via a long, rigidified, and anionic beta-hairpin structure | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Lee, J.H., Cottrell, C.A., Ward, A.B. | 4.4 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null |
7lbe | F | E | 0 | A | protein | null | envelope glycoprotein h | VIRAL PROTEIN/Immune System | 01/07/21 | CryoEM structure of the HCMV Trimer gHgLgO in complex with neutralizing fabs 13H11 and MSL-109 | HUMAN CYTOMEGALOVIRUS (STRAIN MERLIN); HUMAN CYTOMEGALOVIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | human cytomegalovirus (strain merlin) | Kschonsak, M., Rouge, L., Arthur, C.P., Hoangdung, H., Patel, N., Kim, I., Johnson, M., Kraft, E., Rohou, A.L., Gill, A., Martinez-Martin, N., Payandeh, J., Ciferri, C. | 2.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7pry | C | D | 0 | I | protein | null | surface glycoprotein | VIRAL PROTEIN | 09/22/21 | Crystal structure of the receptor binding domain of SARS-CoV-2 beta variant spike glycoprotein in complex with COVOX-45 and beta-6 Fabs | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, D., Ren, J., Stuart, D.I. | 3.1 | X-RAY DIFFRACTION | 0.291 | 0.245 | false | true | IGHV4 | IGKV3 | Kappa | null | null | null | null | null |
6xun | A | B | 0 | F | carbohydrate | NAG | N-ACETYL-D-GLUCOSAMINE | ANTITUMOR PROTEIN | 01/20/20 | Ab 5b1 bound to CA19-9 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Diskin, R., Borenstein-Katz, A. | 2.41 | X-RAY DIFFRACTION | 0.215 | 0.169 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
6ck9 | H | L | 0 | G | protein | null | gp120 of envelope glycoprotein gp160 | VIRAL PROTEIN | 02/27/18 | Crystal Structure of HIV-1 ConC_Base0 Prefusion Env Trimer in Complex with Human Antibody Fragment 3H109L and 35O22 variants at 3.5 Angstrom | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Lai, Y.-T., Kwong, P.D. | 2.714 | X-RAY DIFFRACTION | 0.288 | 0.248 | false | true | IGHV4 | unknown | unknown | null | null | null | null | null |
1jv5 | B | A | 0 | null | null | null | null | Immune System, Sugar Binding Protein | 08/28/01 | Anti-blood group A Fv | HOMO SAPIENS | homo sapiens | homo sapiens | null | Thomas, R., Patenaude, S.I., MacKenzie, C.R., To, R., Hirama, T., Young, N.M., Evans, S.V. | 2.2 | X-RAY DIFFRACTION | 0.223 | 0.183 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6xcm | N | S | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 06/08/20 | Structure of the SARS-CoV-2 spike glycoprotein in complex with the C105 neutralizing antibody Fab fragment (state 1) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Barnes, C.O., Bjorkman, P.J. | 3.42 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
2vyr | I | null | 0 | null | null | null | null | IMMUNE SYSTEM | 07/28/08 | Structure of human MDM4 N-terminal domain bound to a single domain antibody | HOMO SAPIENS | homo sapiens | null | null | Yu, G.W., Vaysburd, M., Allen, M.D., Settanni, G., Fersht, A.R. | 2.0 | X-RAY DIFFRACTION | 0.248 | 0.207 | false | true | IGHV3 | null | null | 0 | -9.69 | ITC | 15 | 19084022 |
7zmr | C | null | 0 | B | protein | null | atp-dependent dna helicase q5 | HYDROLASE | 04/19/22 | Crystal structure of human RECQL5 helicase APO form in complex with engineered nanobody (Gluebody) G2*-011 | Homo sapiens; Lama glama | lama glama | null | homo sapiens | Ye, M., Makola, M., Newman, J.A., Fairhead, M., MacLean, E., Krojer, T., Aitkenhead, H., Bountra, C., Gileadi, O., von Delft, F. | 3.3 | X-RAY DIFFRACTION | 0.292 | 0.243 | false | true | IGHV1 | null | null | null | null | null | null | null |
7k8y | G | I | 0 | B | D | protein | protein | NA | NA | spike glycoprotein | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 09/27/20 | Structure of the SARS-CoV-2 S 2P trimer in complex with the human neutralizing antibody Fab fragment, C121 (State 2) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | severe acute respiratory syndrome coronavirus2 | Abernathy, M.E., Barnes, C.O., Bjorkman, P.J. | 4.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null |
6vo3 | I | K | 0 | D | protein | null | amc009 sosip.v4.2 envelope glycoprotein gp120 | IMMUNE SYSTEM | 01/29/20 | AMC009 SOSIP.v4.2 in complex with PGV04 Fab | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Cottrell, C.A., de Val, N., Ward, A.B. | 4.25 | ELECTRON MICROSCOPY | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null |
7nda | H | L | 0 | C | A | protein | protein | NA | NA | spike glycoprotein | spike glycoprotein | VIRAL PROTEIN | 01/30/21 | EM structure of SARS-CoV-2 Spike glycoprotein (all RBD down) in complex with COVOX-253H55L Fab | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | severe acute respiratory syndrome coronavirus2 | Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D. | 3.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
3c08 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 01/18/08 | Crystal structure the Fab fragment of matuzumab/EMD72000 (Fab72000) | HOMO SAPIENS, MUS MUSCULUS | homo sapiens, mus musculus | homo sapiens, mus musculus | null | Ferguson, K.M., Schmiedel, J., Knoechel, T. | 2.15 | X-RAY DIFFRACTION | 0.264 | 0.224 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
3tnn | E | F | 0 | null | null | null | null | IMMUNE SYSTEM | 09/01/11 | Crystal structure of N5-i5 Fab, an ADCC mediating and non-neutralizing CD4i anti-HIV- 1 antibody. | HOMO SAPIENS | homo sapiens | homo sapiens | null | Wu, X., Pazgier, M. | 1.95 | X-RAY DIFFRACTION | 0.245 | 0.198 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
6war | D | null | 0 | C | protein | null | spike protein | VIRAL PROTEIN/IMMUNE SYSTEM | 04/08/20 | Crystal structure of the MERS-CoV RBD bound by the neutralizing single-domain antibody MERS VHH-55 | MIDDLE EAST RESPIRATORY SYNDROME-RELATED CORONAVIRUS; LAMA GLAMA | lama glama | null | middle east respiratory syndrome-relatedcoronavirus | Wrapp, D., Torres, G.M., McLellan, J.S. | 3.4 | X-RAY DIFFRACTION | 0.268 | 0.214 | false | true | IGHV1 | null | null | null | null | null | null | null |
6jep | K | I | 0 | F | protein | null | genome polyprotein | ANTIVIRAL PROTEIN | 02/07/19 | Structure of a neutralizing antibody bound to the Zika envelope protein domain III | HOMO SAPIENS; ZIKA VIRUS | homo sapiens | homo sapiens | zika virus | Wang, L., Wang, R.K., Wang, L., Ben, H.J., Yu, L., Gao, F., Shi, X.L., Yin, C.B., Zhang, F.C., Xiang, Y., Zhang, L.Q. | 2.316 | X-RAY DIFFRACTION | 0.219 | 0.166 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
5udd | M | S | 0 | F | E | protein | protein | NA | NA | fusion glycoprotein f0 | fusion glycoprotein f0 | Viral Protein/Immune System | 12/26/16 | Crystal Structure of RSV F B9320 Bound to MEDI8897 | HUMAN RESPIRATORY SYNCYTIAL VIRUS 9320; HOMO SAPIENS | homo sapiens | homo sapiens | human respiratory syncytial virus 9320 | human respiratory syncytial virus 9320 | McLellan, J.S. | 4.3 | X-RAY DIFFRACTION | 0.295 | 0.237 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
4kdt | A | null | 0 | D | protein | null | beta-2-microglobulin | IMMUNE SYSTEM | 04/25/13 | Structure of an early native-like intermediate of beta2-microglobulin amyloidosis | CAMELIDAE; HOMO SAPIENS | camelidae | null | homo sapiens | Vanderhaegen, S., Fislage, M., Pardon, E., Versees, W., Steyaert, J. | 2.6 | X-RAY DIFFRACTION | 0.274 | 0.226 | false | true | IGHV1 | null | null | null | null | null | null | null |
7tus | E | F | 0 | null | null | null | null | IMMUNE SYSTEM | 02/03/22 | Sculpting a uniquely reactive cysteine residue for site-specific antibody conjugation | HOMO SAPIENS | homo sapiens | homo sapiens | null | Park, H., Rader, C. | 2.4 | X-RAY DIFFRACTION | 0.257 | 0.218 | false | true | IGHV6 | IGKV1 | Kappa | null | null | null | null | null |
7kbb | A | B | 0 | E | C | protein | protein | NA | NA | ul131a | envelope protein ul128 | VIRAL PROTEIN/IMMUNE SYSTEM | 10/01/20 | Cryo-EM structure of the HCMV pentamer bound by Fabs 2-18 and 8I21 | HOMO SAPIENS; HUMAN CYTOMEGALOVIRUS | homo sapiens | homo sapiens | human cytomegalovirus | human cytomegalovirus | Wrapp, D., McLellan, J.S. | 4.02 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5x2p | J | K | 0 | C | protein | null | taste receptor, type 1, member 2a | SIGNALING PROTEIN/IMMUNE SYSTEM | 02/02/17 | Crystal structure of the medaka fish taste receptor T1r2a-T1r3 ligand binding domains in complex with L-glutamate | ORYZIAS LATIPES; MUS MUSCULUS | mus musculus | mus musculus | oryzias latipes | Nuemket, N., Yasui, N., Atsumi, N., Yamashita, A. | 2.608 | X-RAY DIFFRACTION | 0.228 | 0.153 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
2fjf | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 01/02/06 | Structure of the G6 Fab, a phage derived VEGF binding Fab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Wiesmann, C. | 2.65 | X-RAY DIFFRACTION | 0.248 | 0.199 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7pi3 | R | S | 0 | O | protein | null | cysteine-rich protective antigen | IMMUNE SYSTEM | 08/19/21 | PfCyRPA bound to Fab fragments from monoclonal antibodies Cy.003, Cy.004 and Cy.007 | PLASMODIUM FALCIPARUM 3D7; GALLUS GALLUS | gallus gallus | gallus gallus | plasmodium falciparum 3d7 | Ragotte, R.J., Higgins, M.K. | 3.269 | X-RAY DIFFRACTION | 0.298 | 0.285 | false | true | unknown | unknown | unknown | null | null | null | null | null |
7nx8 | H | L | 0 | E | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 03/17/21 | Crystal structure of the K417T mutant receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-222 and EY6A Fabs | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, D., Ren, J., Stuart, D. | 1.95 | X-RAY DIFFRACTION | 0.246 | 0.223 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5sx4 | H | L | 0 | N | protein | null | epidermal growth factor receptor | TRANSFERASE/IMMUNE SYSTEM | 08/09/16 | Crystal Structure of panitumumab in complex with epidermal growth factor receptor domain 3. | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Sickmier, E.A., Kurzeja, R.J.M., Michelsen, K., Mukta, V., Yang, E., Tasker, A.S. | 2.8 | X-RAY DIFFRACTION | 0.266 | 0.223 | false | true | IGHV4 | IGKV1 | Kappa | 0 | -12.917374 | SPR | null | TBD |
7vsw | B | A | 0 | null | null | null | null | BIOSYNTHETIC PROTEIN | 10/27/21 | Crystal structure of a Fab-like fragment of anti-mesothelin antibody | HOMO SAPIENS | homo sapiens | homo sapiens | null | Yang, Z., Ying, T. | 3.0 | X-RAY DIFFRACTION | 0.253 | 0.217 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
3dvg | B | A | 0 | Y | X | protein | protein | NA | NA | ubiquitin | ubiquitin d77 | IMMUNE SYSTEM | 07/18/08 | Crystal structure of K63-specific fab Apu.3A8 bound to K63-linked di-ubiquitin | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | homo sapiens | Hymowitz, S.G. | 2.6 | X-RAY DIFFRACTION | 0.261 | 0.219 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -10.99 | SPR | null | 18724939 |
7cqd | I | M | 0 | B | protein | null | putative zinc metalloprotease aq_1964,pa14 from podoplanin,putative zinc metalloprotease aq_1964 | HYDROLASE/IMMUNE SYSTEM | 08/10/20 | The NZ-1 Fab complexed with the PDZ tandem fragment of A. aeolicus S2P homolog with the PA14 tag inserted between the residues 235 and 236 | RATTUS NORVEGICUS; AQUIFEX AEOLICUS VF5; HOMO SAPIENS | rattus norvegicus | rattus norvegicus | aquifex aeolicus vf5, homo sapiens | Tamura-Sakaguchi, R., Aruga, R., Nogi, T. | 3.2 | X-RAY DIFFRACTION | 0.286 | 0.265 | false | true | IGHV5 | IGLV3 | Lambda | null | null | null | null | null |
1i8i | B | A | 0 | C | peptide | null | epidermal growth factor receptor, egfrviiipeptide antigen | IMMUNE SYSTEM | 03/14/01 | CRYSTAL STRUCTURE OF DSFV MR1 IN COMPLEX WITH THE PEPTIDE ANTIGEN OF THE MUTANT EPIDERMAL GROWTH FACTOR RECEPTOR, EGFRVIII, AT ROOM TEMPERATURE | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | null | Landry, R.C., Klimowicz, A.C., Lavictoire, S.J., Borisova, S., Kottachchi, D.T., Lorimer, I.A., Evans, S.V. | 2.4 | X-RAY DIFFRACTION | 0.262 | 0.156 | false | true | IGHV5 | IGKV17 | Kappa | 0 | -10.446805 | Unknown | null | TBD |
3cfi | L | null | 0 | K | protein | null | type ii secretory pathway, pseudopilin epsj | PROTEIN TRANSPORT/Immune system | 03/03/08 | Nanobody-aided structure determination of the EPSI:EPSJ pseudopilin heterdimer from Vibrio Vulnificus | VIBRIO VULNIFICUS; LAMA GLAMA | lama glama | null | vibrio vulnificus | Lam, A.Y., Pardon, E., Korotkov, K.V., Steyaert, J., Hol, W.G.J. | 2.58 | X-RAY DIFFRACTION | 0.279 | 0.229 | false | true | IGHV3 | null | null | null | null | null | null | null |
6dbd | B | null | 0 | null | null | null | null | IMMUNE SYSTEM | 05/03/18 | Crystal Structure of VHH R326 | LAMA GLAMA | lama glama | null | null | Brooks, C.L., Toride King, M., Huh, I. | 1.755 | X-RAY DIFFRACTION | 0.182 | 0.160 | false | true | unknown | unknown | unknown | null | null | null | null | null |
7uap | M | N | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN | 03/13/22 | Structure of the SARS-CoV-2 S 6P trimer in complex with the neutralizing antibody Fab fragment, C1520 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Barnes, C.O. | 2.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV4 | Lambda | null | null | null | null | null |
6idi | H | L | 0 | D | protein | null | premembrane protein | VIRUS | 09/10/18 | Cryo-EM structure of Immature Dengue virus serotype 3 in complex with human antibody 1H10 Fab at pH 8.0. | DENGUE VIRUS 3; HOMO SAPIENS | homo sapiens | homo sapiens | dengue virus 3 | Wirawan, M., Fibriansah, G., Ng, T.S., Zhang, Q., Kostyuchenko, V.A., Shi, J., Lok, S.M. | 12 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
4x0k | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 11/21/14 | Engineered Fab fragment specific for EYMPME (EE) peptide | HOMO SAPIENS | homo sapiens | homo sapiens | null | Johnson, J.L., Lieberman, R.L. | 2.04 | X-RAY DIFFRACTION | 0.207 | 0.165 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6wvz | H | L | 0 | M | protein | null | hepatocyte growth factor receptor | Transferase/Immune System | 05/07/20 | Crystal structure of anti-MET Fab arm of amivantamab in complex with human MET | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Cardoso, R.M.F. | 3.1 | X-RAY DIFFRACTION | 0.235 | 0.190 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
3phq | B | A | 0 | B | carbohydrate | KDO | 3-DEOXY-D-MANNO-OCT-2-ULOSONIC ACID | CARBOHYDRATE-BINDING PROTEIN | 11/04/10 | Crystal structure of S64-4 in complex with KDO | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Evans, D.W., Evans, S.V. | 2.0 | X-RAY DIFFRACTION | 0.275 | 0.227 | false | false | IGHV7 | IGKV3 | Kappa | null | null | null | null | null |
7n4m | H | L | 0 | A | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 06/04/21 | Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing human antibody WRAIR-2151. | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Sankhala, R.S., Joyce, M.G. | 3.79 | X-RAY DIFFRACTION | 0.317 | 0.258 | false | true | IGHV4 | IGLV6 | Lambda | null | null | null | null | null |
7cwu | P | I | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN | 08/31/20 | SARS-CoV-2 spike proteins trimer in complex with P17 and FC05 Fabs cocktail | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Wang, X., Wang, N. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
2xqy | G | L | 0 | A | protein | null | envelope glycoprotein h | IMMUNE SYSTEM/VIRAL PROTEIN | 09/08/10 | Crystal structure of Pseudorabies core fragment of glycoprotein H in complex with Fab d6.3 | SUID HERPESVIRUS; MUS MUSCULUS | mus musculus | mus musculus | suid herpesvirus | Backovic, M., Dubois, R., Cockburn, J., Sharff, A., Vaney, M., Granzow, H., Klupp, B., Bricogne, G., Mettenleiter, T., Rey, F. | 2.05 | X-RAY DIFFRACTION | 0.2046 | 0.1878 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
7pi3 | P | Q | 0 | O | protein | null | cysteine-rich protective antigen | IMMUNE SYSTEM | 08/19/21 | PfCyRPA bound to Fab fragments from monoclonal antibodies Cy.003, Cy.004 and Cy.007 | PLASMODIUM FALCIPARUM 3D7; GALLUS GALLUS | gallus gallus | gallus gallus | plasmodium falciparum 3d7 | Ragotte, R.J., Higgins, M.K. | 3.269 | X-RAY DIFFRACTION | 0.298 | 0.285 | false | true | unknown | unknown | unknown | null | null | null | null | null |
1lo2 | Y | X | 0 | Y | Hapten | OX1 | ? | IMMUNE SYSTEM | 05/06/02 | Retro-Diels-Alderase Catalytic Antibody | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Hugot, M., Reymond, J.L., Baumann, U. | 2.0 | X-RAY DIFFRACTION | 0.248 | 0.210 | false | false | IGHV5 | IGKV1 | Kappa | null | null | null | null | null |
4xvu | K | L | 0 | G | protein | null | nyv1 tmd | HYDROLASE/TRANSPORT PROTEIN | 01/28/15 | Structure of Get3 bound to the transmembrane domain of Nyv1 | SACCHAROMYCES CEREVISIAE (ATCC 204508 / S288C); SACCHAROMYCES CEREVISIAE; HOMO SAPIENS, SYNTHETIC CONSTRUCT | homo sapiens, synthetic construct | homo sapiens, synthetic construct | saccharomyces cerevisiae (atcc 204508 / s288c) | Mateja, A., Paduch, M., Chang, H.-Y., Szydlowska, A., Kossiakoff, A.A., Hegde, R.S., Keenan, R.J. | 2.35 | X-RAY DIFFRACTION | 0.234 | 0.197 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7wgt | H | L | 0 | A | protein | null | sodium-dependent dopamine transporter | MEMBRANE PROTEIN | 12/28/21 | X-ray structure of thermostabilized Drosophila dopamine transporter with GABA transporter1-like substitutions in the binding site, in complex with NO711. | Drosophila melanogaster; Mus musculus | mus musculus | mus musculus | drosophila melanogaster | Joseph, D., Penmatsa, A. | 2.75 | X-RAY DIFFRACTION | 0.296 | 0.248 | false | true | IGHV5 | IGKV4 | Kappa | null | null | null | null | null |
4rgn | B | C | 0 | A | protein | null | enterotoxin type b | TOXIN/IMMUNE SYSTEM | 09/30/14 | Structure of Staphylococcal Enterotoxin B bound to two neutralizing antibodies, 14G8 and 6D3 | STAPHYLOCOCCUS AUREUS; MUS MUSCULUS | mus musculus | mus musculus | staphylococcus aureus | Franklin, M.C., Dutta, K., Varshney, A.K., Goger, M.J., Fries, B.C. | 2.698 | X-RAY DIFFRACTION | 0.278 | 0.240 | false | false | IGHV5 | IGKV5 | Kappa | null | null | null | null | null |
6tkb | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 11/28/19 | ChiLob 7/4 H2 HC-C224S F(ab')2 | HOMO SAPIENS | null | null | null | Orr, C.M., Fisher, H., Tews, I. | 2.0 | X-RAY DIFFRACTION | 0.229 | 0.182 | false | false | IGHV1 | IGKV10 | Kappa | null | null | null | null | null |
1i8k | B | A | 0 | C | peptide | null | epidermal growth factor receptor, egfrviiipeptide antigen | IMMUNE SYSTEM | 03/14/01 | CRYSTAL STRUCTURE OF DSFV MR1 IN COMPLEX WITH THE PEPTIDE ANTIGEN OF THE MUTANT EPIDERMAL GROWTH FACTOR RECEPTOR, EGFRVIII, AT LIQUID NITROGEN TEMPERATURE | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | null | Landry, R.C., Klimowicz, A.C., Lavictoire, S.J., Borisova, S., Kottachchi, D.T., Lorimer, I.A., Evans, S.V. | 1.8 | X-RAY DIFFRACTION | 0.224 | 0.172 | false | true | IGHV5 | IGKV17 | Kappa | 0 | -10.44 | SPR | null | 11352579 |
6o3k | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 02/26/19 | Crystal structure of the unbound Fab fragment of the human HIV-1 neutralizing antibody PGZL1.H4K3 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Irimia, A., Wilson, I.A. | 1.451 | X-RAY DIFFRACTION | 0.191 | 0.156 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
7tyy | N | null | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 02/14/22 | Human Amylin2 Receptor in complex with Gs and salmon calcitonin peptide | HOMO SAPIENS; LAMA GLAMA; SYNTHETIC CONSTRUCT | lama glama | null | homo sapiens | homo sapiens | Cao, J., Belousoff, M.J., Johnson, R.M., Wootten, D.L., Sexton, P.M. | 3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null |
4kuz | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 05/22/13 | Crystal structure of anti-emmprin antibody 4A5 Fab in trigonal form | MUS MUSCULUS, HOMO SAPIENS | mus musculus, homo sapiens | mus musculus, homo sapiens | null | Teplyakov, A., Obmolova, G., Gilliland, G.L. | 2.7 | X-RAY DIFFRACTION | 0.268 | 0.230 | false | true | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
4plk | H | L | 0 | A | protein | null | capsid protein | VIRAL PROTEIN/IMMUNE SYSTEM | 05/18/14 | Hepatitis E Virus E2s domain (Genotype I) in complex with a neutralizing antibody 8G12 | HEPATITIS E VIRUS; MUS MUSCULUS | mus musculus | mus musculus | hepatitis e virus | Tang, X.H., Li, S.W., Sivaraman, J. | 4.0 | X-RAY DIFFRACTION | 0.296 | 0.264 | false | false | IGHV1 | IGKV12 | Kappa | null | null | null | null | null |
1oau | K | null | 0 | null | null | null | null | IMMUNE SYSTEM | 01/21/03 | Fv Structure of the IgE SPE-7 in complex with DNP-Ser (immunising hapten) | RATTUS RATTUS | rattus rattus | null | null | James, L.C., Roversi, P., Tawfik, D. | 1.8 | X-RAY DIFFRACTION | 0.264 | 0.226 | false | true | IGHV1 | null | null | 0 | null | Other | 20 | 12610298 |
4uif | G | H | 0 | A | protein | null | dengue virus serotype 2 strain pvp94 07 - envelopeprotein | null | 03/30/15 | Cryo-EM structure of Dengue virus serotype 2 in complex with antigen- binding fragments of human antibody 2D22 | DENGUE VIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | dengue virus 2 | Fibriansah, G., Ibarra, K.D., Ng, T.-S., Smith, S.A., Tan, J.L., Lim, X.-N., Ooi, J.S.G., Kostyuchenko, V.A., Wang, J., de Silva, A.M., Harris, E., Crowe Junior, J.E., Lok, S.-M. | 6.5 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
7sn3 | D | null | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 10/27/21 | Structure of human SARS-CoV-2 spike glycoprotein trimer bound by neutralizing antibody C1C-A3 Fab (variable region) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | null | severe acute respiratory syndrome coronavirus2 | Pan, J., Abraham, J., Shankar, S. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null |
3rhw | I | O | 0 | D | protein | null | avermectin-sensitive glutamate-gated chloride channel gluclalpha | transport protein/immune system | 04/12/11 | C. elegans glutamate-gated chloride channel (GluCl) in complex with Fab and ivermectin | CAENORHABDITIS ELEGANS; MUS MUSCULUS | mus musculus | mus musculus | caenorhabditis elegans | Hibbs, R.E., Gouaux, E. | 3.26 | X-RAY DIFFRACTION | 0.270 | 0.239 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
5jqd | D | A | 0 | null | null | null | null | IMMUNE SYSTEM | 05/04/16 | Antibody Fab Fragment | HOMO SAPIENS | homo sapiens | homo sapiens | null | Zhang, Z., Prachanronarong, K., Gellatly, K., Marasco, W.A., Schiffer, C.A. | 2.591 | X-RAY DIFFRACTION | 0.242 | 0.212 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
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