pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 354
values | r_factor stringclasses 342
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
7l56 | J | K | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN/Immune System | 12/21/20 | Cryo-EM structure of the SARS-CoV-2 spike glycoprotein bound to Fab 2-43 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Rapp, M., Shapiro, L. | 3.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null |
7ral | H | L | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 07/01/21 | SARS-CoV-2 S bound to S2X259 Fab (local refinement of the RBD/S2X259 variable domains) | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Veesler, D., Tortorici, M.A., Seattle Structural Genomics Center for Infectious Disease (SSGCID) | NOT | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
7k8u | H | L | 0 | A | B | protein | protein | NA | NA | spike glycoprotein | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 09/27/20 | Structure of the SARS-CoV-2 S 2P trimer in complex with the human neutralizing antibody Fab fragment, C002 (state 1) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | severe acute respiratory syndrome coronavirus2 | Barnes, C.O., Malyutin, A.G., Bjorkman, P.J. | 3.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV3 | Kappa | null | null | null | null | null |
4rrp | J | D | 0 | P | protein | null | antigen asf1p | IMMUNE SYSTEM | 11/06/14 | Crystal Structure of the Fab complexed with antigen Asf1p, Northeast Structural Genomics Consortium (NESG) Target PdR16 | HOMO SAPIENS; SACCHAROMYCES CEREVISIAE | homo sapiens | homo sapiens | saccharomyces cerevisiae | Kuzin, A., Lew, S., Seetharaman, J., Mao, L., Xiao, R., Oconnell, P.T., Maglaqui, M., Bailey, L., Everett, J.K., Acton, T.B., Montelione, G.T., Hunt, J.F., Tong, L., Chaperone-Enabled Studies of Epigenetic Regulation Enzymes (CEBS), Northeast Structural Genomics Consortium (NESG) | 2.79 | X-RAY DIFFRACTION | 0.253 | 0.183 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
3cm9 | A | L | 6 | null | null | null | null | IMMUNE SYSTEM | 03/21/08 | Solution Structure of Human SIgA2 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Bonner, A., Almogren, A., Furtado, P.B., Kerr, M.A., Perkins, S.J. | NOT | SOLUTION SCATTERING | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7eh3 | A | null | 4 | null | null | null | null | IMMUNE SYSTEM | 03/28/21 | Structure of Nanobody Nb23 in solution using NMR spectroscopy | LAMA GLAMA | lama glama | null | null | Percipalle, M., Hunashal, Y., Esposito, G., Fogolari, F. | NOT | SOLUTION NMR | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
4idj | H | L | 0 | A | protein | null | alpha-hemolysin | IMMUNE SYSTEM | 12/12/12 | S.Aureus a-hemolysin monomer in complex with Fab | STAPHYLOCOCCUS AUREUS; HOMO SAPIENS | homo sapiens | homo sapiens | staphylococcus aureus | Strop, P. | 3.36 | X-RAY DIFFRACTION | 0.296 | 0.249 | false | true | IGHV1 | IGKV3 | Kappa | 0 | -16.05654 | Unknown | null | TBD |
6hxw | C | D | 0 | B | protein | null | 5'-nucleotidase | IMMUNE SYSTEM | 10/18/18 | structure of human CD73 in complex with antibody IPH53 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | synthetic construct | synthetic construct | homo sapiens | Roussel, A., Amigues, B. | 2.78 | X-RAY DIFFRACTION | 0.232 | 0.192 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
1bvl | A | B | 0 | null | null | null | null | HUMANIZED ANTIBODY | 09/16/98 | HUMANIZED ANTI-LYSOZYME FV | HOMO SAPIENS, MUS MUSCULUS | homo sapiens, mus musculus | homo sapiens, mus musculus | null | Holmes, M.A., Foote, J. | 2.87 | X-RAY DIFFRACTION | unknown | 0.220 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
7bue | J | K | 0 | C | protein | null | dengue serotype 2 e protein ectodomain | VIRUS | 05/13/20 | Cryo-EM structure of Dengue virus serotype 2 complexed with Fab SIgN-3C at pH 5.0 | HOMO SAPIENS; DENGUE VIRUS 2 | homo sapiens | homo sapiens | dengue virus 2 | Zhang, S., Chew, S.V., Lim, X.N., Ng, T.S., Kostyuchenko, V.A., Lok, S.M. | 7.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7rlv | E | F | 0 | Q | peptide | null | peptide from circumsporozoite protein variant vk210 | ANTIMICROBIAL PROTEIN | 07/26/21 | Antibody 2F2 in complex with P. vivax CSP peptide GDRADGQPAGDRADGQPA | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | plasmodium vivax | Kucharska, I., Julien, J.P. | 2.2 | X-RAY DIFFRACTION | 0.220 | 0.179 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
2brr | H | L | 0 | P | peptide | null | class 1 outer membrane protein variable region 2 | IMMUNE SYSTEM | 05/11/05 | Complex of the neisserial PorA P1.4 epitope peptide and two Fab- fragments (antibody MN20B9.34) | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | neisseria meningitidis | Oomen, C.J., Hoogerhout, P., Kuipers, B., Vidarsson, G., vanAlphen, L., Gros, P. | 1.95 | X-RAY DIFFRACTION | 0.238 | 0.198 | false | true | IGHV9 | IGKV4 | Kappa | null | null | null | null | null |
5a2j | H | h | 0 | P | peptide | null | the naked peptide apdtrp | PEPTIDE BINDING PROTEIN | 05/20/15 | Crystal structure of scFv-SM3 in complex with the naked peptide APDTRP | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | null | homo sapiens | Martinez-Saez, N., Castro-Lopez, J., Valero-Gonzalez, J., Madariaga, D., Companon, I., Somovilla, V.J., Salvado, M., Asensio, J.L., Jimenez-Barbero, J., Avenoza, A., Busto, J.H., Bernardes, G.J.L., Peregrina, J.M., Hurtado-Guerrero, R., Corzana, F. | 1.65 | X-RAY DIFFRACTION | 0.19733 | 0.16643 | true | true | unknown | unknown | unknown | 0.000001 | -7.98611 | Unknown | null | TBD |
4aj0 | null | A | 0 | null | null | null | null | IMMUNE SYSTEM | 02/15/12 | Crystallographic structure of an amyloidogenic variant, 3rCW, of the germinal line lambda 3 | HOMO SAPIENS | null | homo sapiens | null | Villalba, M.I., Luna, O.D., Rudino-Pinera, E., Sanchez, R., Sanchez-Lopez, R., Rojas-Trejo, S., Olamendi-Portugal, T., Fernandez-Velasco, D.A., Becerril, B. | 1.7 | X-RAY DIFFRACTION | 0.2116 | 0.1741 | false | true | null | IGLV3 | Lambda | null | null | null | null | null |
7czv | H | K | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 09/09/20 | S protein of SARS-CoV-2 in complex bound with P5A-1B6_3B | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Yan, R.H., Zhang, Y.Y., Li, Y.N., Zhou, Q. | 3.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6q1z | H | L | 0 | A | protein | null | neuraminidase | VIRAL PROTEIN,HYDROLASE/IMMUNE SYSTEM | 08/06/19 | Crystal structure of human 1G04 Fab in complex with influenza virus neuraminidase from A/Hunan/02650/2016 (H7N9) | INFLUENZA A VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus | Zhu, X., Wilson, I.A. | 3.446 | X-RAY DIFFRACTION | 0.247 | 0.197 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7kbm | A | a | 0 | null | null | null | null | PROTEIN BINDING | 10/02/20 | Reverse Transcriptase Diabody with R83C Mutation Crystallized in C2 | HOMO SAPIENS | homo sapiens | null | null | Chesterman, C., Arnold, E. | 2.0 | X-RAY DIFFRACTION | 0.257 | 0.209 | true | true | unknown | unknown | unknown | null | null | null | null | null |
4rnr | C | D | 0 | D | carbohydrate | NAG | N-ACETYL-D-GLUCOSAMINE | IMMUNE SYSTEM | 10/24/14 | Crystal structure of broadly neutralizing anti-HIV antibody PGT130 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Kong, L., Wilson, I.A. | 2.758 | X-RAY DIFFRACTION | 0.269 | 0.244 | false | true | IGHV4 | IGLV2 | Lambda | null | null | null | null | null |
3zdx | E | F | 0 | C | protein | null | integrin alpha-iib | CELL ADHESION/IMMUNE SYSTEM | 12/03/12 | Integrin alphaIIB beta3 headpiece and RGD peptide complex | MUS MUSCULUS; HOMO SAPIENS | mus musculus | mus musculus | homo sapiens | Zhu, J.H., Zhu, J.Q., Springer, T.A. | 2.45 | X-RAY DIFFRACTION | 0.1971 | 0.1628 | false | true | IGHV14 | IGKV14 | Kappa | null | null | null | null | null |
1xf2 | B | A | 0 | null | null | null | null | IMMUNE SYSTEM/DNA | 09/13/04 | Structure of Fab DNA-1 complexed with dT3 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | null | Schuermann, J.P., Prewitt, S.P., Deutscher, S.L., Tanner, J.J. | 2.3 | X-RAY DIFFRACTION | 0.242 | 0.202 | false | true | IGHV1 | IGKV12 | Kappa | null | null | null | null | null |
6umx | H | L | 0 | A | protein | null | growth/differentiation factor 8 | SIGNALING PROTEIN/IMMUNE SYSTEM | 10/10/19 | Structural basis for specific inhibition of extracellular activation of pro/latent myostatin by SRK-015 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Dagbay, K.B., Treece, E., Streich Jr., F.C., Jackson, J.W., Faucette, R.R., Nikiforov, A., Lin, S.C., Bostion, C.J., Nicholls, S.B., Capili, A.D., Carven, G.J. | 2.79 | X-RAY DIFFRACTION | 0.264 | 0.217 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
6pv8 | F | G | 0 | D | E | protein | protein | NA | NA | fusion protein of neuronal acetylcholine receptor subunitalpha-3 and soluble cytochrome b562 | fusion protein of neuronal acetylcholine receptor subunitbeta-4 and soluble cytochrome b562 | MEMBRANE PROTEIN | 07/19/19 | Human alpha3beta4 nicotinic acetylcholine receptor in complex with AT-1001 | HOMO SAPIENS; ESCHERICHIA COLI O11; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens, escherichia coli o11 | homo sapiens, escherichia coli o11 | Gharpure, A., Teng, J., Zhuang, Y., Noviello, C.M., Walsh, R.M., Cabuco, R., Howard, R.J., Zaveri, N.T., Lindahl, E., Hibbs, R.E. | 3.87 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
7qn8 | M | null | 0 | D | protein | null | gamma-aminobutyric acid receptor subunit beta-3 | MEMBRANE PROTEIN | 12/20/21 | Cryo-EM structure of human full-length beta3delta GABA(A)R in complex with histamine and nanobody Nb25 | HOMO SAPIENS | homo sapiens | null | homo sapiens | Sente, A., Desai, R., Naydenova, K., Malinauskas, T., Jounaidi, Y., Miehling, J., Zhou, X., Masiulis, S., Hardwick, S.W., Chirgadze, D.Y., Miller, K.W., Aricescu, A.R. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
7wec | H | L | 0 | A | protein | null | spike glycoprotein | IMMUNE SYSTEM/VIRAL PROTEIN | 12/23/21 | SARS-CoV-2 Omicron variant spike protein with three XGv347 Fabs binding to three closed state RBDs | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Wang, X., Wang, L. | 3.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6oyh | G | null | 0 | C | protein | null | phospho-n-acetylmuramoyl-pentapeptide-transferase | MEMBRANE PROTEIN/TRANSFERASE | 05/14/19 | Crystal structure of MraY bound to carbacaprazamycin | LAMA GLAMA; AQUIFEX AEOLICUS (STRAIN VF5) | lama glama | null | aquifex aeolicus (strain vf5) | Mashalidis, E.H., Lee, S.Y. | 2.95 | X-RAY DIFFRACTION | 0.268 | 0.249 | false | true | IGHV1 | null | null | null | null | null | null | null |
5vl7 | H | L | 0 | B | protein | null | proprotein convertase subtilisin/kexin type 9 | HYDROLASE | 04/25/17 | PCSK9 complex with Fab33 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Eigenbrot, C., Shia, S. | 3.5 | X-RAY DIFFRACTION | 0.245 | 0.199 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6xw6 | D | null | 0 | B | protein | null | capsid protein | VIRAL PROTEIN | 01/23/20 | Crystal structure of murine norovirus P domain in complex with Nanobody NB-5853 | MURINE NOROVIRUS 1; VICUGNA PACOS | vicugna pacos | null | murine norovirus 1 | Kilic, T., Sabin, C., Hansman, G. | 1.96 | X-RAY DIFFRACTION | 0.248 | 0.199 | false | true | IGHV1 | null | null | null | null | null | null | null |
7ul5 | D | null | 0 | A | protein | null | somatostatin receptor type 2 | MEMBRANE PROTEIN | 04/03/22 | CryoEM Structure of Inactive SSTR2 bound to Nb6 | Homo sapiens; Lama glama | lama glama | null | homo sapiens | Robertson, M.J., Skiniotis, G. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
7q6c | H | L | 0 | A | protein | null | complement component c6 | IMMUNE SYSTEM | 11/06/21 | complement C6 FIM1-2 bound to CP010 antibody | HOMO SAPIENS; MUS MUSCULUS; LAMA GLAMA | mus musculus | mus musculus | homo sapiens | Olesen, H.G., Andersen, G.R. | 2.29274 | X-RAY DIFFRACTION | 0.233 | 0.208 | false | true | IGHV5 | IGKV2 | Kappa | null | null | null | null | null |
7dkj | C | D | 0 | A | protein | null | hemagglutinin | VIRAL PROTEIN | 11/24/20 | Hemagglutinin Influenza A virus (A/Okuda/1957(H2N2) bound with a neutralizing antibody | INFLUENZA A VIRUS (A/OKUDA/1957(H2N2)); MUS MUSCULUS | mus musculus | mus musculus | influenza a virus (a/okuda/1957(h2n2)) | Kamada, K., Shirouzu, M. | 3.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV7 | IGKV12 | Kappa | null | null | null | null | null |
7czr | H | K | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 09/09/20 | S protein of SARS-CoV-2 in complex bound with P5A-1B8_2B | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Yan, R.H., Zhang, Y.Y., Li, Y.N., Zhou, Q. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
2kh2 | B | b | 23 | A | protein | null | interleukin-1 beta | Cytokine/IMMUNE SYSTEM | 03/23/09 | Solution structure of a scFv-IL-1B complex | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | Wilkinson, I.C., Hall, C.J., Veverka, V., Muskett, F.W., Stephens, P.E., Taylor, R.J., Henry, A.J., Carr, M.D. | NOT | SOLUTION NMR | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
6eyn | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 11/13/17 | Structure of the 8D6 (anti-IgE) Fab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Chen, J.B., Ramadani, F., Pang, M.O.Y., Beavil, R.L., Holdom, M.D., Mitropoulou, A.N., Beavil, A.J., Gould, H.J., Chang, T.W., Sutton, B.J., McDonnell, J.M., Davies, A.M. | 2.4 | X-RAY DIFFRACTION | 0.212 | 0.181 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6fxn | F | G | 0 | B | protein | null | tumor necrosis factor ligand superfamily member 13b | IMMUNE SYSTEM | 03/09/18 | Crystal structure of human BAFF in complex with Fab fragment of anti-BAFF antibody belimumab | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Lammens, A., Maskos, K., Willen, L., Jiang, X., Schneider, P. | 2.9 | X-RAY DIFFRACTION | 0.231 | 0.191 | false | true | IGHV1 | IGLV3 | Lambda | null | null | null | null | null |
5xqw | H | L | 0 | H | Hapten | 8EU | ethyl-[(4-nitrophenyl)methoxy]phosphinic acid | IMMUNE SYSTEM | 06/07/17 | Catalytic antibody 7B9 | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Ito, N., Fujii, I., Tsumuraya, T. | 2.2 | X-RAY DIFFRACTION | 0.261 | 0.187 | false | true | IGHV1 | IGKV14 | Kappa | null | null | null | null | null |
6oik | H | h | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(o) subunit alpha | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | SIGNALING PROTEIN | 04/09/19 | Muscarinic acetylcholine receptor 2-Go complex | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | homo sapiens | Maeda, S., Qianhui, Q., Skiniotis, G., Kobilka, B. | 3.6 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
6xlq | B | C | 0 | A | protein | null | butyrophilin subfamily 3 member a1 | IMMUNE SYSTEM | 06/29/20 | Crystal Structure of the Human BTN3A1 Ectodomain in Complex with the CTX-2026 Fab | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | homo sapiens | Payne, K.K., Mine, J.A., Biswas, S., Chaurio, R.A., Perales-Puchalt, A., Anadon, C.M., Costich, T.L., Harro, C.M., Walrath, J., Ming, Q., Tcyganov, E., Buras, A.L., Rigolizzo, K.E., Mandal, G., Lajoie, J., Ophir, M., Tchou, J., Marchion, D., Luca, V.C., Bobrowicz, P., McLaughlin, B., Eskiocak, U., Schmidt, M., Cubillos... | 3.0 | X-RAY DIFFRACTION | 0.296 | 0.246 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
4qgy | A | null | 0 | null | null | null | null | IMMUNE SYSTEM | 05/26/14 | Camelid (llama) nanobody n25 (VHH) against type 6 secretion system TssM protein | LAMA GLAMA | lama glama | null | null | Nguyen, V.S., Desmyter, A., Le, T.T.H., Durand, E., Kellenberger, C., Douzi, B., Spinelli, S., Cascales, E., Cambillau, C., Roussel, A. | 1.38 | X-RAY DIFFRACTION | 0.198 | 0.191 | false | true | IGHV1 | null | null | null | null | null | null | null |
2y5t | A | B | 0 | E | G | F | peptide | peptide | peptide | NA | NA | NA | c1 | c1 | c1 | IMMUNE SYSTEM | 01/17/11 | Crystal structure of the pathogenic autoantibody CIIC1 in complex with the triple-helical C1 peptide | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | mus musculus | mus musculus | mus musculus | Dobritzsch, D., Lindh, I., Schneider, N., Uysal, H., Nandakumar, K.S., Burkhardt, H., Schneider, G., Holmdahl, R. | 2.2 | X-RAY DIFFRACTION | 0.24544 | 0.18845 | false | false | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
7nll | A | null | 0 | D | protein | null | surface glycoprotein | VIRAL PROTEIN | 02/22/21 | SARS-CoV-2 Spike RBD (dimer) in complex with two Fu2 nanobodies | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; VICUGNA PACOS | vicugna pacos | null | severe acute respiratory syndrome coronavirus2 | Das, H., Hallberg, B.M. | 2.89 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
7ra3 | E | e | 0 | A | protein | null | guanine nucleotide-binding protein g(i) subunit alpha-3,isoform gnas-2 of guanine nucleotide-binding protein g(s) subunit alpha isoforms short | MEMBRANE PROTEIN | 06/29/21 | cryo-EM of human Gastric inhibitory polypeptide receptor GIPR bound to GIP | HOMO SAPIENS; MUS MUSCULUS; LAMA GLAMA; SYNTHETIC CONSTRUCT | mus musculus | null | homo sapiens | Sun, B., Kobilka, B.K., Sloop, K.W., Feng, D., Kobilka, T.S. | 3.24 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
4yga | H | null | 0 | G | protein | null | calmodulin-domain protein kinase 1 | METAL BINDING PROTEIN | 02/26/15 | CDPK1, from Toxoplasma gondii, bound to inhibitory VHH-1B7 | VICUGNA PACOS; TOXOPLASMA GONDII | vicugna pacos | null | toxoplasma gondii | Knockenhauer, K.E., Schwartz, T.U. | 2.94 | X-RAY DIFFRACTION | 0.262 | 0.226 | false | true | IGHV1 | null | null | null | null | null | null | null |
6cxy | H | L | 0 | C | protein | null | cadherin-1 | CELL ADHESION | 04/04/18 | Crystal Structure of Human E-cadherin bound by mouse monoclonal antibody Fab mAb-1_19A11 | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Seattle Structural Genomics Center for Infectious Disease (SSGCID) | 2.2 | X-RAY DIFFRACTION | 0.197 | 0.163 | false | true | IGHV2 | IGKV8 | Kappa | null | null | null | null | null |
4zyp | K | M | 0 | A | protein | null | fusion glycoprotein f0,fibritin | IMMUNE SYSTEM | 05/21/15 | Crystal Structure of Motavizumab and Quaternary-Specific RSV-Neutralizing Human Antibody AM14 in Complex with Prefusion RSV F Glycoprotein | MUS MUSCULUS; HUMAN RESPIRATORY SYNCYTIAL VIRUS A (STRAIN A2); HOMO SAPIENS | mus musculus | mus musculus | human respiratory syncytial virus a (straina2), enterobacteria phage t4 | Gilman, M.S.A., McLellan, J.S. | 5.5 | X-RAY DIFFRACTION | 0.277 | 0.211 | false | true | IGHV2 | IGKV1 | Kappa | null | null | null | null | null |
5kaq | H | L | 0 | B | protein | null | hemagglutinin | IMMUNE SYSTEM | 06/01/16 | Crystal structure of broadly neutralizing Influenza A antibody 31.a.83 in complex with Hemagglutinin Hong Kong 1968. | INFLUENZA A VIRUS (A/HONG KONG/1-4-MA21-1/1968(H3N2)) | influenza a virus (a/hong kong/1-4-ma21-1/1968(h3n2)) | influenza a virus (a/hong kong/1-4-ma21-1/1968(h3n2)) | influenza a virus (a/hong kong/1-4-ma21-1/1968(h3n2)) | Joyce, M.G., Thomas, P.V., Wheatley, A.K., McDermott, A.B., Mascola, J.R., Kwong, P.D. | 3.514 | X-RAY DIFFRACTION | 0.313 | 0.270 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
5w9n | E | F | 0 | D | protein | null | mers s | VIRAL PROTEIN | 06/23/17 | MERS S ectodomain trimer in complex with variable domain of neutralizing antibody G4 | MIDDLE EAST RESPIRATORY SYNDROME-RELATED CORONAVIRUS; MUS MUSCULUS | mus musculus | mus musculus | middle east respiratory syndrome-relatedcoronavirus | Pallesen, J., Ward, A.B. | 5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
3kr3 | H | L | 0 | D | protein | null | insulin-like growth factor ii | IMMUNE SYSTEM | 11/17/09 | Crystal structure of IGF-II antibody complex | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Peat, T.S., Newman, J., Adams, T.E. | 2.2 | X-RAY DIFFRACTION | 0.251 | 0.199 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -14.06 | SPR | 25 | 20515953 |
5t5b | A | B | 0 | O | protein | null | 10e8 epitope scaffold t117v2 | IMMUNE SYSTEM | 08/30/16 | CRYSTAL STRUCTURE OF THE COMPLEX OF 10E8 FAB LIGHT CHAIN MUTANT5 AND T117V2 HIV-1 MPER SCAFFOLD | SYNTHETIC CONSTRUCT; HOMO SAPIENS | homo sapiens | homo sapiens | synthetic construct | Irimia, A., Wilson, I.A. | 2.07 | X-RAY DIFFRACTION | 0.216 | 0.178 | false | true | IGHV3 | IGLV3 | Lambda | 0 | -13.519788 | SPR | null | TBD |
3p30 | H | L | 0 | A | protein | null | hiv-1 gp41 | IMMUNE SYSTEM | 10/04/10 | crystal structure of the cluster II Fab 1281 in complex with HIV-1 gp41 ectodomain | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Frey, G., Chen, J., Rits-Volloch, S., Freeman, M.M., Zolla-Pazner, S., Chen, B. | 3.3 | X-RAY DIFFRACTION | 0.289 | 0.261 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
7e3l | D | E | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 02/09/21 | Ultrapotent SARS-CoV-2 neutralizing antibodies with protective efficacy against newly emerged mutational variants | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Guo, H., Li, T., Liu, F., Gao, Y., Ji, X., Yang, H. | 3.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
4xaw | H | L | 0 | P | peptide | null | fragment of hiv glycoprotein (gp41) including the mperregion 671-683 | IMMUNE SYSTEM | 12/15/14 | Crystal structure of human 4E10 Fab in complex with its peptide epitope on HIV-1 gp41: Crystals cryoprotected with phosphatidic acid (08:0 PA) | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Irimia, A., Stanfield, R.L., Wilson, I.A. | 1.47 | X-RAY DIFFRACTION | 0.181 | 0.148 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
7tcc | D | E | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/Immune System | 12/23/21 | Cryo-EM structure of SARS-CoV-2 Omicron spike in complex with antibodies A19-46.1 and B1-182.1 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, T., Kwong, P.D. | 3.86 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV8 | Lambda | null | null | null | null | null |
6orp | D | E | 0 | B | protein | null | rc1 variant of hiv-1 env glycoprotein gp120 | VIRAL PROTEIN/Immune System | 04/30/19 | Modified BG505 SOSIP-based immunogen RC1 in complex with the elicited V3-glycan patch antibody Ab897NHP | HUMAN IMMUNODEFICIENCY VIRUS 1; MACACA MULATTA | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | Abernathy, M.E., Gristick, H.B., Bjorkman, P.J. | 4.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGLV1 | Lambda | null | null | null | null | null |
6c6x | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 01/19/18 | Crystal structure of Middle-East Respiratory Syndrome (MERS) coronavirus neutralizing antibody JC57-14 isolated from a vaccinated rhesus macaque. | MACACA MULATTA | macaca mulatta | macaca mulatta | null | Joyce, M.G., Mascola, J.R., Graham, B.S., Kwong, P.D. | 1.99 | X-RAY DIFFRACTION | 0.208 | 0.176 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
3hmx | H | L | 0 | A | protein | null | interleukin-12 subunit beta | Cytokine/IMMUNE SYSTEM | 05/29/09 | Crystal structure of ustekinumab FAB/IL-12 complex | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Luo, J. | 3.0 | X-RAY DIFFRACTION | 0.303 | 0.211 | false | true | IGHV5 | IGKV1D | Kappa | null | null | null | null | null |
2ig2 | H | L | 0 | null | null | null | null | IMMUNOGLOBULIN | 04/18/89 | DIR PRIMAERSTRUKTUR DES KRISTALLISIERBAREN MONOKLONALEN IMMUNOGLOBULINS IGG1 KOL. II. AMINOSAEURESEQUENZ DER L-KETTE, LAMBDA-TYP, SUBGRUPPE I (GERMAN) | HOMO SAPIENS | homo sapiens | homo sapiens | null | Marquart, M., Huber, R. | 3.0 | X-RAY DIFFRACTION | unknown | 0.207 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
7qic | B | null | 0 | A | protein | null | divalent metal cation transporter | MEMBRANE PROTEIN | 12/14/21 | Structure of magnesium-bound EleNRMT in complex with two nanobodies at 4.1A | EGGERTHELLA LENTA; SYNTHETIC CONSTRUCT | synthetic construct | null | eggerthella lenta | Ramanadane, K., Straub, M.S., Dutzler, R., Manatschal, C. | 4.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
7ljr | S | T | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 01/30/21 | SARS-CoV-2 Spike Protein Trimer bound to DH1043 fab | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Gobeil, S., Acharya, P. | 3.66 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
5uk1 | H | h | 0 | C | protein | null | hemagglutinin ha1 | VIRAL PROTEIN/IMMUNE SYSTEM | 01/19/17 | CryoEM structure of an influenza virus receptor-binding site antibody-antigen interface - Class 3 | HOMO SAPIENS; INFLUENZA A VIRUS (A/SOLOMON ISLANDS/3/2006(H1N1)); INFLUENZA A VIRUS | homo sapiens | null | influenza a virus (a/solomonislands/3/2006(h1n1)) | Liu, Y., Pan, J., Caradonna, T., Jenni, S., Raymond, D.D., Schmidt, A.G., Harrison, S.C., Grigorieff, N. | 4.8 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
5vm4 | J | null | 0 | null | null | null | null | UNKNOWN FUNCTION | 04/26/17 | The apo form of the triclocarban-binding single domain camelid nanobody VHH T10 | LAMA GLAMA | lama glama | null | null | Tabares-da Rosa, S., Gonzalez-Sapienza, G., Wilson, D.K. | 1.9 | X-RAY DIFFRACTION | 0.241 | 0.197 | false | true | unknown | unknown | unknown | null | null | null | null | null |
6awn | B | C | 0 | A | protein | null | sodium-dependent serotonin transporter | TRANSPORT PROTEIN | 09/06/17 | X-ray structure of the S439T human serotonin transporter complexed with paroxetine at the central site | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Coleman, J.A., Gouaux, E. | 3.62 | X-RAY DIFFRACTION | 0.263 | 0.256 | false | true | IGHV1 | IGKV6 | Kappa | null | null | null | null | null |
6b3s | F | G | 0 | E | protein | null | epidermal growth factor receptor | TRANSFERASE/immune system | 09/23/17 | Crystal structure of the Fab fragment of necitumumab (Fab11F8) in complex with domain III from a cetuximab resistant variant of EGFR (sEGFRd3-S468R) | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Ferguson, K.M., Bagchi, A. | 2.8 | X-RAY DIFFRACTION | 0.245 | 0.208 | false | true | IGHV4 | IGKV3 | Kappa | 0 | -10.80593 | SPR | null | TBD |
6btj | A | B | 0 | null | null | null | null | ANTIVIRAL PROTEIN | 12/06/17 | Crystal structure of pan-H7, anti-hemagglutinin monoclonal antibody H7.5 (Fab fragment) | HOMO SAPIENS | homo sapiens | homo sapiens | null | Shanshan, L., Ian, A.W. | 1.999 | X-RAY DIFFRACTION | 0.201 | 0.200 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7rkv | D | H | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 07/22/21 | Structure of the SARS-CoV-2 S 6P trimer in complex with neutralizing antibody C118 (State 1) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Barnes, C.O., Jette, C.A., Bjorkman, P.J. | 3.45 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV4 | Lambda | null | null | null | null | null |
3bn9 | D | C | 0 | B | protein | null | membrane-type serine protease 1 | HYDROLASE | 12/13/07 | Crystal Structure of MT-SP1 in complex with Fab Inhibitor E2 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Farady, C.J., Schneider, E.L., Egea, P.F., Goetz, D.H., Craik, C.S. | 2.173 | X-RAY DIFFRACTION | 0.267 | 0.223 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6v8z | C | F | 0 | A | protein | null | envelope glycoprotein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 12/12/19 | VRC03 and 10-1074 Bound BG505 F14 HIV-1 SOSIP Envelope Trimer Structure | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Henderson, R., Acharya, P. | 2.9 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV3 | Kappa | null | null | null | null | null |
5gkr | A | B | 0 | T | nucleic-acid | null | dna (5'-d(p*tp*tp*tp*t)-3') | IMMUNE SYSTEM/DNA | 07/05/16 | Crystal structure of SLE patient-derived anti-DNA antibody in complex with oligonucleotide | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | homo sapiens | Arimori, T., Sakakibara, S., Kikutani, H., Takagi, J. | 2.1 | X-RAY DIFFRACTION | 0.185 | 0.163 | false | true | IGHV4 | IGLV2 | Lambda | 0 | -11.372747 | Unknown | null | TBD |
5tqq | I | M | 0 | B | protein | null | chloride channel protein | TRANSPORT PROTEIN | 10/24/16 | Cryo-electron microscopy structure of a bovine CLC-K chloride channel, main (class 1) conformation | MUS MUSCULUS; BOS TAURUS | mus musculus | mus musculus | bos taurus | Park, E., MacKinnon, R. | 3.76 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV6 | Kappa | null | null | null | null | null |
2jb6 | H | L | 0 | H | Hapten | T5C | 2-{(1E,3Z,5E,7E)-7-[3,3-DIMETHYL-5-SULFO-1-(2-SULFOETHYL)-1,3-DIHYDRO-2H-INDOL-2-YLIDENE]-4-METHYLHEPTA-1,3,5-TRIEN-1-YL}-3,3-DIMETHYL-5-SULFO-1-(2-SULFOETHYL)-3H-INDOLIUM | IMMUNE SYSTEM | 12/03/06 | Fab fragment in complex with small molecule hapten, crystal form-2 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Hillig, R.C., Baesler, S., Malawski, G., Badock, V., Bahr, I., Schirner, M., Licha, K. | 2.85 | X-RAY DIFFRACTION | 0.282 | 0.229 | false | true | IGHV1 | IGLV2 | Lambda | 0 | -14.950215 | Unknown | null | TBD |
2qtj | D | N | 9 | null | null | null | null | IMMUNE SYSTEM | 08/02/07 | Solution structure of human dimeric immunoglobulin A | HOMO SAPIENS | homo sapiens | homo sapiens | null | Bonner, A., Furtado, P.B., Almogren, A., Kerr, M.A., Perkins, S.J. | NOT | SOLUTION SCATTERING | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
5gzo | H | L | 0 | A | protein | null | genome polyprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 09/29/16 | Structure of neutralizing antibody bound to Zika envelope protein | HOMO SAPIENS; ZIKA VIRUS | homo sapiens | homo sapiens | zika virus | Wang, Q., Yang, H., Liu, X., Dai, L., Ma, T., Qi, J., Wong, G., Peng, R., Liu, S., Li, J., Li, S., Song, J., Liu, J., He, J., Yuan, H., Xiong, Y., Liao, Y., Li, J., Yang, J., Tong, Z., Griffin, B., Bi, Y., Liang, M., Xu, X., Cheng, G., Wang, P., Qiu, X., Kobinger, G., Shi, Y., Yan, J., Gao, G.F. | 2.755 | X-RAY DIFFRACTION | 0.277 | 0.231 | false | true | IGHV4 | IGKV1 | Kappa | 0 | -9.258056 | SPR | null | TBD |
6qex | C | B | 0 | A | protein | null | multidrug resistance protein 1 | MEMBRANE PROTEIN | 01/08/19 | Nanodisc reconstituted human ABCB1 in complex with UIC2 fab and taxol | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Alam, A., Locher, K.P. | 3.6 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
2kh2 | B | b | 59 | A | protein | null | interleukin-1 beta | Cytokine/IMMUNE SYSTEM | 03/23/09 | Solution structure of a scFv-IL-1B complex | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | Wilkinson, I.C., Hall, C.J., Veverka, V., Muskett, F.W., Stephens, P.E., Taylor, R.J., Henry, A.J., Carr, M.D. | NOT | SOLUTION NMR | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
1oax | H | L | 0 | H | Hapten | ANQ | ACENAPHTHENEQUINONE | IMMUNE SYSTEM | 01/21/03 | Fv Structure of the IgE SPE-7 in complex with acenaphthenequinone | RATTUS RATTUS | rattus rattus | rattus rattus | rattus rattus | James, L.C., Roversi, P., Tawfik, D. | 2.67 | X-RAY DIFFRACTION | 0.282 | 0.238 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
4nhg | I | F | 0 | null | null | null | null | IMMUNE SYSTEM | 11/05/13 | Crystal Structure of 2G12 IgG Dimer | HOMO SAPIENS | homo sapiens | homo sapiens | null | Wu, Y., West, Jr., A.P., Kim, H.J., Thornton, M.E., Ward, A.B., Bjorkman, P.J. | 8.001 | X-RAY DIFFRACTION | 0.369 | 0.359 | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null |
3ujj | H | L | 0 | P | peptide | null | gp120 | IMMUNE SYSTEM | 11/07/11 | Crystal structure of anti-HIV-1 V3 Fab 4025 in complex with Con A peptide | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Kong, X.P., Sampson, J. | 2.0 | X-RAY DIFFRACTION | 0.213 | 0.177 | false | false | IGHV5 | IGLV3 | Lambda | null | null | null | null | null |
6oao | F | f | 0 | E | protein | null | duffy binding surface protein region ii | CELL INVASION | 03/18/19 | Structure of DBP in complex with human neutralizing antibody 092096 | PLASMODIUM VIVAX; HOMO SAPIENS | homo sapiens | null | plasmodium vivax | Urusova, D., Tolia, N.H. | 3.497 | X-RAY DIFFRACTION | 0.279 | 0.238 | true | true | unknown | unknown | unknown | null | null | null | null | null |
6ey0 | F | null | 0 | B | protein | null | t9ss component cytoplasmic membrane protein porm | PROTEIN TRANSPORT | 11/10/17 | N-terminal part (residues 30-212) of PorM with the llama naobody nb01 | PORPHYROMONAS GINGIVALIS; LAMA GLAMA | lama glama | null | porphyromonas gingivalis | Leone, P., Roche, J., Cambillau, C., Roussel, A. | 2.4 | X-RAY DIFFRACTION | 0.242 | 0.213 | false | true | IGHV1 | null | null | null | null | null | null | null |
6tgg | H | h | 0 | P | peptide | null | mucin-1 | ANTITUMOR PROTEIN | 04/08/20 | scFv-1SM3 in complex with glycopeptide containing an sp2-imino sugar | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | null | homo sapiens | Bermejo, I.A., Navo, C.D., Castro-Lopez, J., Samchez-Fernandez, E.M., Guerreiro, A., Avenoza, A., Busto, J.H., Garcia-Martin, F., Nishimura, S.I., Garcia-Fernandez, J.M., Ortiz-Mellet, C., Bernardes, G.J.L., Hurtado-Guerrero, R., Peregrina, J.M., Corzana, F. | 2.0 | X-RAY DIFFRACTION | 0.238 | 0.175 | true | true | unknown | unknown | unknown | null | null | null | null | null |
4rau | Q | P | 0 | R | protein | null | platelet factor 4 | IMMUNE SYSTEM | 09/11/14 | crystal structure of RTOFab in complex with human PF4 | MUS MUSCULUS; HOMO SAPIENS | mus musculus | mus musculus | homo sapiens | Cai, Z., Zhu, Z., Liu, Q., Greene, M.I. | 3.74 | X-RAY DIFFRACTION | 0.284 | 0.243 | false | true | IGHV5 | IGKV10 | Kappa | null | null | null | null | null |
6phd | H | L | 0 | C | protein | null | 25 kda ookinete surface antigen | IMMUNE SYSTEM | 06/25/19 | Pfs25 in complex with the human transmission blocking antibody 2586 | HOMO SAPIENS; PLASMODIUM FALCIPARUM | homo sapiens | homo sapiens | plasmodium falciparum | McLeod, B.R., Julien, J.P. | 3.1 | X-RAY DIFFRACTION | 0.231 | 0.213 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
5wcd | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 06/29/17 | Crystal structure of the broadly neutralizing Influenza A antibody VRC 315 04-1D02 Fab. | HOMO SAPIENS | homo sapiens | homo sapiens | null | Joyce, M.G., Andrews, S.F., Mascola, J.R., McDermott, A.B., Kwong, P.D. | 1.814 | X-RAY DIFFRACTION | 0.216 | 0.177 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
7che | H | L | 0 | R | protein | null | sars-cov-2 receptor binding domain | ANTIVIRAL PROTEIN/IMMUNE SYSTEM | 07/05/20 | Crystal structure of the SARS-CoV-2 RBD in complex with BD-236 Fab and BD-368-2 Fab | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Xiao, J., Zhu, Q. | 3.416 | X-RAY DIFFRACTION | 0.239 | 0.225 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6p62 | F | G | 0 | E | protein | null | hiv-1 env bg505 nfl td+ | VIRAL PROTEIN/immune system | 05/31/19 | HIV Env BG505 NFL TD+ in complex with antibody E70 fragment antigen binding | HUMAN IMMUNODEFICIENCY VIRUS 1; ORYCTOLAGUS CUNICULUS | oryctolagus cuniculus | oryctolagus cuniculus | human immunodeficiency virus 1 | Ozorowski, G., Torres, J.L., Ward, A.B. | 3.57 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
4y5x | G | H | 0 | I | protein | null | erythropoietin receptor | protein binding/immune system | 02/12/15 | Diabody 305 complex with EpoR | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Moraga, I., Guo, F., Ozkan, E., Jude, K.M., Garcia, K.C. | 3.15 | X-RAY DIFFRACTION | 0.241 | 0.201 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
7rso | H | L | 0 | A | protein | null | amc016 gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/11/21 | AMC016 SOSIP.v4.2 in complex with PGV04 Fab | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Bader, D.L.V., Cottrell, C.A., Ward, A.B. | 4.1 | ELECTRON MICROSCOPY | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null |
7tat | D | E | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 12/21/21 | SARS-CoV-2 spike in complex with the S2K146 neutralizing antibody Fab fragment (two receptor-binding domains open) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Park, Y.J., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
3csy | G | H | 0 | P | O | protein | protein | NA | NA | envelope glycoprotein gp2 | envelope glycoprotein gp1 | IMMUNE SYSTEM/VIRAL PROTEIN | 04/10/08 | Crystal structure of the trimeric prefusion Ebola virus glycoprotein in complex with a neutralizing antibody from a human survivor | HOMO SAPIENS; ZAIRE EBOLA VIRUS | homo sapiens | homo sapiens | zaire ebola virus | zaire ebola virus | Lee, J.E., Fusco, M.L., Hessell, A.J., Oswald, W.B., Burton, D.R., Saphire, E.O. | 3.4 | X-RAY DIFFRACTION | 0.302 | 0.261 | false | true | IGHV3 | IGKV4 | Kappa | null | null | null | null | null |
6z6v | G | null | 0 | B | C | protein | protein | NA | NA | complement c1q subcomponent subunit b | complement c1q subcomponent subunit c | IMMUNE SYSTEM | 05/29/20 | Globular head of C1q in complex with the nanobody C1qNb75 | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | homo sapiens | Laursen, N.S., Andersen, G.R. | 2.19 | X-RAY DIFFRACTION | 0.227 | 0.178 | false | true | IGHV1 | null | null | null | null | null | null | null |
7lvw | I | null | 0 | D | protein | null | fusion glycoprotein f0 | IMMUNE SYSTEM/VIRAL PROTEIN | 02/26/21 | Structure of RSV F in Complex with VHH Cl184 | RESPIRATORY SYNCYTIAL VIRUS; LAMA GLAMA | lama glama | null | respiratory syncytial virus | Hsieh, C.-L., McLellan, J.S. | 2.1 | X-RAY DIFFRACTION | 0.230 | 0.201 | false | true | IGHV1 | null | null | null | null | null | null | null |
7duq | N | null | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | BIOSYNTHETIC PROTEIN | 01/11/21 | Cryo-EM structure of the compound 2 and GLP-1-bound human GLP-1 receptor-Gs complex | HOMO SAPIENS; RATTUS NORVEGICUS; BOS TAURUS; SYNTHETIC CONSTRUCT | synthetic construct | null | homo sapiens | rattus norvegicus | Cong, Z., Chen, L., Ma, H., Zhou, Q., Zou, X., Ye, C., Dai, A., Liu, Q., Huang, W., Sun, X., Wang, X., Xu, P., Zhao, L., Xia, T., Zhong, W., Yang, D., Xu, H.E., Zhang, Y., Wang, M. | 2.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null |
6cde | h | l | 0 | d | protein | null | unknown | VIRAL PROTEIN | 02/08/18 | Cryo-EM structure at 3.8 A resolution of vaccine-elicited antibody vFP20.01 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Acharya, P., Xu, K., Liu, K., Carragher, B., Potter, C.S., Kwong, P.D. | 3.8 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7bel | E | F | 0 | X | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 12/23/20 | Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in a ternary complex with COVOX-88 and COVOX-45 Fabs | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, D., Zhao, Y., Ren, J., Stuart, D. | 2.53 | X-RAY DIFFRACTION | 0.286 | 0.249 | false | true | IGHV4 | IGLV1 | Lambda | null | null | null | null | null |
6bck | H | L | 0 | G | protein | null | clade a/e 93th057 hiv-1 gp120 core | VIRAL PROTEIN/IMMUNE SYSTEM | 10/20/17 | Crystal Structure of Broadly Neutralizing Antibody N49P7 in Complex with HIV-1 Clade AE strain 93TH057 gp120 core. | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Tolbert, W.D., Gohain, N., Pazgier, M. | 2.7 | X-RAY DIFFRACTION | 0.285 | 0.225 | false | true | unknown | IGLV2 | Lambda | 0 | -12.367557 | Unknown | null | TBD |
7dwt | H | L | 0 | A | protein | null | envelope protein | VIRUS/IMMUNE SYSTEM | 01/18/21 | Cryo-EM structure of Dengue virus serotype 1 strain WestPac 74 in complex with human antibody 1C19 Fab at 37 deg C (Class 1 particle) | DENGUE VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | dengue virus 1 | Fibriansah, G., Ng, T.S., Kostyuchenko, V.A., Shi, J., Lok, S.M. | 19 | ELECTRON MICROSCOPY | null | null | false | false | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6w51 | S | T | 0 | null | null | null | null | IMMUNE SYSTEM | 03/12/20 | Structure of the antibody fragment H2 in complex with HLA-A*02:01/p53R175H | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | null | Wright, K.M., Gabelli, S.B. | 3.53 | X-RAY DIFFRACTION | 0.283 | 0.200 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6m87 | D | C | 0 | D | Hapten | 2M9 | 8-methoxypyrene-1,3,6-trisulfonic acid | IMMUNE SYSTEM | 08/21/18 | Fab 10A6 in complex with MPTS | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Stanfield, R.L., Wilson, I.A. | 2.609 | X-RAY DIFFRACTION | 0.265 | 0.228 | false | false | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
6e4y | H | L | 0 | P | peptide | null | proprotein convertase subtilisin/kexin type 9 | IMMUNE SYSTEM | 04/10/19 | Anti-PCSK9 fab 6E2 bound to the N-terminal peptide from PCSK9, unmodified | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | Ultsch, M.H., Kirchhofer, D.K. | 2.24 | X-RAY DIFFRACTION | 0.255 | 0.212 | false | true | IGHV6 | IGKV2 | Kappa | null | null | null | null | null |
2xzq | H | L | 0 | P | peptide | null | phage display derived antigen | IMMUNE SYSTEM | 12/01/10 | CRYSTAL STRUCTURE ANALYSIS OF THE ANTI-(4-HYDROXY-3-NITROPHENYL)- ACETYL MURINE GERMLINE MONOCLONAL ANTIBODY BBE6.12H3 FAB FRAGMENT IN COMPLEX WITH A PHAGE DISPLAY DERIVED DODECAPEPTIDE YQLRPNAETLRF | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | synthetic construct | Khan, T., Salunke, D.M. | 2.4 | X-RAY DIFFRACTION | 0.2506 | 0.2407 | false | false | IGHV1 | IGLV1 | Lambda | 0 | -8.983584 | Unknown | null | TBD |
6nmr | A | B | 0 | E | protein | null | tyrosine-protein phosphatase non-receptor type substrate 1 | IMMUNE SYSTEM | 01/11/19 | Blocking Fab 119 anti-SIRP-alpha antibody in complex with SIRP-alpha Variant 1 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Wibowo, A.S., Carter, J.J., Sim, J. | 2.42 | X-RAY DIFFRACTION | 0.323 | 0.289 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
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