pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 354
values | r_factor stringclasses 342
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
6z7w | F | E | 0 | M | N | peptide | peptide | NA | NA | insulin | insulin | HORMONE | 06/02/20 | Human insulin in complex with the analytical antibody HUI-018 Fab | MUS MUSCULUS; HOMO SAPIENS | mus musculus | mus musculus | homo sapiens | homo sapiens | Johansson, E. | 2.42 | X-RAY DIFFRACTION | 0.275 | 0.209 | false | true | IGHV1 | IGKV6 | Kappa | null | null | null | null | null |
7s2s | C | null | 0 | B | protein | null | interleukin-2 receptor subunit beta | PROTEIN BINDING | 09/03/21 | nanobody bound to Interleukin-2Rbeta | CAMELUS BACTRIANUS; HOMO SAPIENS | camelus bactrianus | null | homo sapiens | Glassman, C.R., Jude, K.M., Yen, M., Garcia, K.C. | 1.93 | X-RAY DIFFRACTION | 0.247 | 0.213 | false | true | IGHV1 | null | null | null | null | null | null | null |
6txz | J | N | 0 | C | protein | null | hepatitis a virus cellular receptor 2 | IMMUNE SYSTEM | 04/08/20 | FAB PART OF M6903 IN COMPLEX WITH HUMAN TIM3 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Musil, D., Sood, V. | 3.06 | X-RAY DIFFRACTION | 0.253 | 0.197 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
2kh2 | B | b | 0 | A | protein | null | interleukin-1 beta | Cytokine/IMMUNE SYSTEM | 03/23/09 | Solution structure of a scFv-IL-1B complex | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | Wilkinson, I.C., Hall, C.J., Veverka, V., Muskett, F.W., Stephens, P.E., Taylor, R.J., Henry, A.J., Carr, M.D. | NOT | SOLUTION NMR | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
7ew5 | B | C | 0 | M | protein | null | major capsid protein l1 | VIRAL PROTEIN | 05/24/21 | immune complex of HPV6 L1 pentamer and neutralizing antibody 13H5 | HUMAN PAPILLOMAVIRUS TYPE 6; MUS MUSCULUS | mus musculus | mus musculus | human papillomavirus type 6 | Wang, Z.P., Wang, D.N., Gu, Y., Li, S.W. | 3.606 | X-RAY DIFFRACTION | 0.293 | 0.252 | false | false | IGHV14 | IGKV6 | Kappa | null | null | null | null | null |
3pnw | K | J | 0 | L | protein | null | tudor domain-containing protein 3 | PROTEIN BINDING/IMMUNE SYSTEM | 11/19/10 | Crystal Structure of the tudor domain of human TDRD3 in complex with an anti-TDRD3 FAB | HOMO SAPIENS, SYNTHETIC CONSTRUCT; HOMO SAPIENS | synthetic | synthetic | homo sapiens | Loppnau, P., Tempel, W., Wernimont, A.K., Lam, R., Ravichandran, M., Adams-Cioaba, M.A., Persson, H., Sidhu, S.S., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Weigelt, J., Cossar, D., Structural Genomics Consortium (SGC) | 2.05 | X-RAY DIFFRACTION | 0.264 | 0.223 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7k37 | J | I | 0 | C | D | protein | protein | NA | NA | hemagglutinin | hemagglutinin | VIRAL PROTEIN | 09/10/20 | Structure of full-length influenza HA with a head-binding antibody at pH 7.8 | INFLUENZA A VIRUS (STRAIN A/HONG KONG/1/1968 H3N2); HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus (strain a/hong kong/1/1968h3n2) | influenza a virus (strain a/hong kong/1/1968h3n2) | Gui, M., Xiang, Y., Gao, J. | 2.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
1qyg | H | L | 0 | H | Hapten | BCG | 3-(BENZOYLOXY)-8-METHYL-8-AZABICYCLO[3.2.1]OCTANE-2-CARBOXYLIC ACID | IMMUNE SYSTEM | 09/10/03 | ANTI-COCAINE ANTIBODY M82G2 COMPLEXED WITH BENZOYLECGONINE | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Pozharski, E., Hewagama, A., Shanafelt, A., Petsko, G., Ringe, D. | 1.81 | X-RAY DIFFRACTION | 0.216 | 0.178 | false | false | IGHV6 | IGKV2 | Kappa | 0 | -9.350354 | Unknown | null | TBD |
7bua | H | L | 0 | A | protein | null | genome polyprotein | VIRUS | 05/13/20 | Cryo-EM structure of zika virus complexed with Fab SIgN-3C at pH 8.0 | HOMO SAPIENS; ZIKA VIRUS ZIKV/H. SAPIENS/FRENCHPOLYNESIA/10087PF/2013 | homo sapiens | homo sapiens | zika virus zikv/h.sapiens/frenchpolynesia/10087pf/2013 | Zhang, S., Chew, S.V., Lim, X.N., Ng, T.S., Kostyuchenko, V.A., Lok, S.M. | 4.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6ule | A | B | 0 | I | peptide | null | circumsporozoite protein | IMMUNE SYSTEM | 06/10/20 | Crystal structure of 2541 Fab in complex with circumsporozoite protein NANP5 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | plasmodium falciparum | Thai, E., Scally, S.W., Murugan, R., Wardemann, H., Julien, J.P. | 2.55 | X-RAY DIFFRACTION | 0.259 | 0.209 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6xv8 | C | null | 0 | null | null | null | null | STRUCTURAL PROTEIN | 01/21/20 | Crystal structure of Megabody Mb-Nb207-c7HopQ_G10 | LAMA GLAMA; HELICOBACTER PYLORI (STRAIN G27) | lama glama, helicobacter pylori (strain g27) | null | null | Steyaert, J., Uchanski, T., Fischer, B. | 3.15 | X-RAY DIFFRACTION | 0.297 | 0.255 | false | true | IGHV1 | null | null | null | null | null | null | null |
6u55 | A | null | 0 | B | protein | null | nucleoprotein | IMMUNE SYSTEM | 08/26/19 | Anti-Zaire ebolavirus Nucleoprotein Single Domain Antibody Zaire E (ZE) Complexed with Sudan ebolavirus Nucleoprotein C-terminal Domain 634-738 | LAMA GLAMA; SUDAN EBOLAVIRUS (STRAIN BONIFACE-76) | lama glama | null | sudan ebolavirus (strain boniface-76) | Taylor, A.B., Sherwood, L.J., Hart, P.J., Hayhurst, A. | 1.93 | X-RAY DIFFRACTION | 0.263 | 0.193 | false | true | IGHV1 | null | null | null | null | null | null | null |
4rzc | E | F | 0 | E | carbohydrate | M6P | ALPHA-D-MANNOSE-6-PHOSPHATE | IMMUNE SYSTEM | 12/19/14 | Fv M6P-1 in complex with mannose-6-phosphate | ORYCTOLAGUS CUNICULUS | oryctolagus cuniculus | oryctolagus cuniculus | oryctolagus cuniculus | Blackler, R.J., Evans, D.W., Evans, S.V., Muller-Loennies, S. | 2.723 | X-RAY DIFFRACTION | 0.267 | 0.226 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
4nkm | E | F | 0 | null | null | null | null | IMMUNE SYSTEM/CHAPERONE | 11/12/13 | Crystal structure of engineered anti-EE scFv antibody fragment | MUS MUSCULUS | mus musculus | mus musculus | null | Kalyoncu, S., Hyun, J., Pai, J.C., Johnson, J.L., Etzminger, K., Jain, A., Heaner Jr., D., Molares, I.A., Truskett, T.M., Maynard, J.A., Lieberman, R.L. | 3.71 | X-RAY DIFFRACTION | 0.282 | 0.264 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6xq2 | F | E | 0 | D | protein | null | hemagglutinin | VIRAL PROTEIN/IMMUNE SYSTEM | 07/09/20 | Human antibody S8V2-37 in complex with the influenza hemagglutinin head domain of A/Texas/50/2012(H3N2) | INFLUENZA A VIRUS (A/TEXAS/50/2012(H3N2)); HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus (a/texas/50/2012(h3n2)) | McCarthy, K.R., Harrison, S.C. | 3.002 | X-RAY DIFFRACTION | 0.290 | 0.247 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
3jba | H | L | 0 | A | protein | null | major capsid protein l1 | VIRUS/IMMUNE SYSTEM | 08/11/15 | The U4 antibody epitope on human papillomavirus 16 identified by cryo-EM | HUMAN PAPILLOMAVIRUS TYPE 16; MUS MUSCULUS | mus musculus | mus musculus | human papillomavirus type 16 | Guan, J., Bywaters, S.M., Brendle, S.A., Lee, H., Ashley, R.E., Christensen, N.D., Hafenstein, S. | 12 | ELECTRON MICROSCOPY | null | null | false | false | IGHV5 | IGKV8 | Kappa | null | null | null | null | null |
7a4y | C | null | 0 | null | null | null | null | DE NOVO PROTEIN | 08/20/20 | Crystal structure of the P5P6 coiled-coil in complex with nanobody Nb34. | LAMA GLAMA; SYNTHETIC CONSTRUCT | lama glama | null | null | Hadzi, S. | 2.157 | X-RAY DIFFRACTION | 0.229 | 0.196 | false | true | IGHV3 | null | null | null | null | null | null | null |
7orb | C | D | 0 | X | protein | null | spike protein s1 | VIRAL PROTEIN | 06/04/21 | Crystal structure of the L452R mutant receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-75 and COVOX-253 Fabs | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, D., Ren, J., Stuart, D.I. | 2.5 | X-RAY DIFFRACTION | 0.251 | 0.213 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6x04 | L | null | 0 | K | protein | null | nucleoporin nup133 | STRUCTURAL PROTEIN | 05/15/20 | Nup133 (aa55-481) from S. cerevisiae bound by VHH-SAN5 | SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C); VICUGNA PACOS | vicugna pacos | null | saccharomyces cerevisiae (strain atcc 204508 /s288c) | Nordeen, S.A., Schwartz, T.U. | 2.68 | X-RAY DIFFRACTION | 0.261 | 0.244 | false | true | IGHV1 | null | null | null | null | null | null | null |
5jo4 | C | D | 0 | null | null | null | null | IMMUNE SYSTEM | 05/01/16 | Antibody Fab Fragment Complex | HOMO SAPIENS | homo sapiens | homo sapiens | null | Zhang, Z., Prachanronarong, K.P., Marasco, W.A., Schiffer, C.A.S. | 2.53 | X-RAY DIFFRACTION | 0.248 | 0.197 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6vy2 | H | L | 0 | A | protein | null | glycoprotein 120 | IMMUNE SYSTEM | 02/25/20 | Cryo-EM structure of M1214_N1 Fab in complex with CH505 TF chimeric SOSIP.664 Env trimer | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Chan, K.-W., Kong, X.P. | 4.86 | ELECTRON MICROSCOPY | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null |
4hij | D | C | 0 | D | carbohydrate | RAM | polysaccharide | IMMUNE SYSTEM | 10/11/12 | Anti-Streptococcus pneumoniae 23F Fab 023.102 with bound L-rhamnose-(1-2)-alpha-D-galactose-(3-O)-phosphate-2-glycerol | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Bryson, S., Risnes, L., Damgupta, S., Thomson, C.A., Schrader, J.W., Pai, E.F. | 2.1 | X-RAY DIFFRACTION | 0.262 | 0.249 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
7ll1 | J | K | 0 | G | protein | null | envelope glycoprotein gp120 | IMMUNE SYSTEM/VIRAL PROTEIN | 02/03/21 | Cryo-EM structure of BG505 DS-SOSIP in complex with glycan276-dependent broadly neutralizing antibody VRC40.01 Fab | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Manne, K., Acharya, P. | 3.73 | ELECTRON MICROSCOPY | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null |
7pg8 | U | S | 0 | W | protein | null | ion transport protein,voltage-gated sodium channel | MEMBRANE PROTEIN | 08/13/21 | NaV_Ae1/Sp1CTD_pore-ANT05 complex | HOMO SAPIENS; ALKALILIMNICOLA EHRLICHII MLHE-1; RUEGERIA POMEROYI DSS-3 | homo sapiens | homo sapiens | alkalilimnicola ehrlichii mlhe-1, ruegeriapomeroyi dss-3 | Lolicato, M., Arrigoni, C. | 4.5 | X-RAY DIFFRACTION | 0.352 | 0.303 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6xrj | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 07/13/20 | Crystal structure of the disulfide linked DH717.1 Fab dimer, derived from a macaque HIV-1 vaccine-induced Env glycan-reactive neutralizing antibody B cell lineage | HOMO SAPIENS | homo sapiens | homo sapiens | null | Manne, K., Nicely, N.I., Acharya, P. | 3.15 | X-RAY DIFFRACTION | 0.282 | 0.245 | false | true | IGHV4 | IGLV2 | Lambda | null | null | null | null | null |
3j8z | I | M | 0 | B | A | protein | protein | NA | NA | l1 | l1 | VIRUS/IMMUNE SYSTEM | 11/20/14 | Cryo-EM reconstruction of quasi-HPV16 complex with H16.1A Fab | HUMAN PAPILLOMAVIRUS TYPE 16; MUS MUSCULUS | mus musculus | mus musculus | human papillomavirus type 16 | human papillomavirus type 16 | Guan, J., Hafenstein, S. | 14 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
6azx | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 09/13/17 | Crystal structure of the neutralizing anti-circumsporozoite protein 663 antibody | HOMO SAPIENS | homo sapiens | homo sapiens | null | Scally, S.W., Bosch, A., Triller, G., Wardemann, H., Julien, J.P. | 2.1 | X-RAY DIFFRACTION | 0.238 | 0.206 | false | true | IGHV3 | IGKV2 | Kappa | null | null | null | null | null |
5yd5 | C | c | 0 | D | peptide | null | peptide epitope (mutation n3a) | IMMUNE SYSTEM | 09/11/17 | Crystal structure of the scFv antibody 4B08 with epitope peptide (mutation N3A) | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | null | homo sapiens | Caaveiro, J.M.M., Miyanabe, K., Tsumoto, K. | 1.96 | X-RAY DIFFRACTION | 0.258 | 0.203 | true | true | unknown | unknown | unknown | null | null | null | null | null |
7l2f | H | L | 0 | A | protein | null | spike glycoprotein | Viral Protein/IMMUNE SYSTEM | 12/16/20 | Cryo-EM structure of NTD-directed neutralizing antibody 5-24 in complex with prefusion SARS-CoV-2 spike glycoprotein | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Cerutti, G., Shapiro, L. | 3.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
7mfu | B | null | 0 | A | protein | null | spike protein s1 | VIRAL PROTEIN | 04/11/21 | Crystal structure of synthetic nanobody complexes with SARS-CoV-2 receptor binding domain | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; SYNTHETIC CONSTRUCT | synthetic construct | null | severe acute respiratory syndrome coronavirus2 | Jiang, J., Ahmad, J., Natarajan, K., Boyd, L.F., Margulies, D.H. | 1.7 | X-RAY DIFFRACTION | 0.215 | 0.181 | false | true | IGHV1 | null | null | null | null | null | null | null |
3kdm | H | L | 0 | H | Hapten | TES | TESTOSTERONE | IMMUNE SYSTEM | 10/23/09 | Crystal Structure of Human Anti-steroid Fab 5F2 in Complex with Testosterone | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Niemi, M.H., Rouvinen, J. | 1.5 | X-RAY DIFFRACTION | 0.208 | 0.180 | true | true | IGHV3 | IGKV1 | Kappa | 0 | -9.54 | Other | 25 | 21360611 |
4nhh | O | Q | 0 | C | protein | null | 2g12 igg dimer heavy chain | IMMUNE SYSTEM | 11/05/13 | Structure of 2G12 IgG Dimer | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Wu, Y., West Jr., A.P., Kim, H.J., Thornton, M.E., Ward, A.B., Bjorkman, P.J. | 6.5 | X-RAY DIFFRACTION | 0.366 | 0.381 | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null |
7vla | S | s | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 10/02/21 | Cryo-EM structure of the CCL15(27-92) bound CCR1-Gi complex | HOMO SAPIENS | homo sapiens | null | homo sapiens | homo sapiens | Shao, Z., Shen, Q., Mao, C., Yao, B., Chen, L., Zhang, H., Shen, D., Zhang, C., Li, W., Du, X., Li, F., Ma, H., Chen, Z., Xu, H.E., Ying, S., Zhang, Y., Shen, H. | 2.7 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
1za3 | H | L | 0 | R | protein | null | tumor necrosis factor receptor superfamily member 10b | IMMUNE SYSTEM/SIGNALING PROTEIN | 04/05/05 | The crystal structure of the YSd1 Fab bound to DR5 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | null | null | homo sapiens | Fellouse, F.A., Li, B., Compaan, D.M., Peden, A.A., Hymowitz, S.G., Sidhu, S.S. | 3.35 | X-RAY DIFFRACTION | 0.280 | 0.224 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -10.18 | SPR | null | 15854651 |
6pyc | null | L | 0 | L | Hapten | P4S | (3beta,5beta,14alpha,15beta)-3,5-dihydroxy-14,15-epoxybufa-20,22-dienolide | IMMUNE SYSTEM | 07/29/19 | Structure of kappa-on-heavy (KoH) antibody Fab bound to the cardiac hormone marinobufagenin | MUS MUSCULUS | null | mus musculus | mus musculus | Franklin, M.C., Macdonald, L.E., McWhirter, J., Murphy, A.J. | 3.6 | X-RAY DIFFRACTION | 0.287 | 0.234 | false | true | null | IGKV3 | Kappa | null | null | null | null | null |
7tpr | E | null | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 01/25/22 | Camel nanobodies 7A3 and 8A2 broadly neutralize SARS-CoV-2 variants | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; CAMELUS DROMEDARIUS | camelus dromedarius | null | severe acute respiratory syndrome coronavirus2 | Butay, K.J., Zhu, J., Dandey, V.P., Hong, J., Kwon, H.J., Chen, C.Z., Duan, Z., Li, D., Ren, H., Liang, T., Martin, N., Esposito, D., Ortega-Rodriguez, U., Xu, M., Xie, H., Ho, M., Cachau, R., Borgnia, M.J. | 2.39 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
6mw9 | O | P | 0 | N | protein | null | e2 | VIRUS/IMMUNE SYSTEM | 10/29/18 | CryoEM structure of chimeric Eastern Equine Encephalitis Virus with Fab of EEEV-3 antibody | EASTERN EQUINE ENCEPHALITIS VIRUS; MUS MUSCULUS | mus musculus | mus musculus | eastern equine encephalitis virus | Hasan, S.S., Sun, C., Kim, A.S., Watanabe, Y., Chen, C.L., Klose, T., Buda, G., Crispin, M., Diamond, M.S., Klimstra, W.B., Rossmann, M.G. | 7.3 | ELECTRON MICROSCOPY | null | null | false | false | IGHV9 | IGLV1 | Lambda | null | null | null | null | null |
5n09 | I | M | 0 | B | protein | null | envelope glycoprotein e | Immune System/Viral Protein | 02/02/17 | Crystal structure of L107C/A313C covalently linked dengue 2 virus envelope glycoprotein dimer in complex with the Fab fragment of the broadly neutralizing human antibody EDE2 A11 | HOMO SAPIENS; DENGUE VIRUS 2 | homo sapiens | homo sapiens | dengue virus 2 | Duquerroy, S., Rouvinski, A., Guardado-Calvo, P., Vaney, M.-C., Sharma, A., Rey, F. | 3.9 | X-RAY DIFFRACTION | 0.347 | 0.304 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
4ris | H | L | 0 | P | peptide | null | envelope glycoprotein | Immune system | 10/07/14 | Structural Analysis of the Unmutated Ancestor of the HIV-1 Envelope V2 Region Antibody CH58 Isolated From an RV144 HIV-1 Vaccine Efficacy Trial Vaccinee and Associated with Decreased Transmission Risk | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Nicely, N.I., Wiehe, K., Kepler, T.B., Jaeger, F.H., Dennison, S.M., Liao, H.-X., Alam, S.M., Hwang, K.-K., Bonsignori, M., Rerks-Ngarm, S., Nitayaphan, S., Pitisuttithum, P., Kaewkungwal, J., Robb, M.L., O'Connell, R.J., Michael, N.L., Kim, J.H., Haynes, B.F. | 2.3 | X-RAY DIFFRACTION | 0.246 | 0.161 | false | true | IGHV5 | IGLV6 | Lambda | 0.000001 | -8.247889 | Unknown | null | TBD |
5nml | E | null | 0 | null | null | null | null | IMMUNE SYSTEM | 04/06/17 | Nb36 Ser85Cys with Hg bound | LAMA GLAMA | lama glama | null | null | Hansen, S.B., Andersen, K.R., Laursen, N.S., Andersen, G.R. | 2.5 | X-RAY DIFFRACTION | 0.265 | 0.238 | false | true | IGHV1 | null | null | null | null | null | null | null |
4ut9 | H | L | 0 | A | protein | null | envelope glycoprotein e | VIRAL PROTEIN | 07/18/14 | Crystal structure of dengue 2 virus envelope glycoprotein dimer in complex with the ScFv fragment of the broadly neutralizing human antibody EDE1 C10 | HOMO SAPIENS; DENGUE VIRUS 2 | homo sapiens | homo sapiens | dengue virus 2 | ROUVINSKI, A., GUARDADO-CALVO, P., BARBA-SPAETH, G., DUQUERROY, S., VANEY, M.C., REY, F.A. | 3.2 | X-RAY DIFFRACTION | 0.2487 | 0.1975 | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null |
4fqc | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 06/25/12 | Crystal Structure of PGT121 Fab Bound to a complex-type sialylated N-glycan | HOMO SAPIENS | homo sapiens | homo sapiens | null | Scharf, L., Bjorkman, P.J. | 2.4 | X-RAY DIFFRACTION | 0.249 | 0.201 | false | true | IGHV4 | IGLV3 | Lambda | null | null | null | null | null |
6wiy | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 04/11/20 | Crystal structure of Fab 54-1G05 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Wu, N.C., Wilson, I.A. | 1.65 | X-RAY DIFFRACTION | 0.188 | 0.158 | false | true | IGHV6 | IGKV3 | Kappa | null | null | null | null | null |
6mlm | E | I | 0 | A | protein | null | hemagglutinin ha1 chain | VIRAL PROTEIN/Immune System | 09/27/18 | H7 HA0 in complex with Fv from H7.5 IgG | INFLUENZA A VIRUS (A/NEW YORK/107/2003(H7N2)); INFLUENZA A VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus (a/new york/107/2003(h7n2)) | Pallesen, J., Turner, H.L., Ward, A.B. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
5mhg | H | L | 0 | H | Hapten | 4IB | TETRAIODOBISPHENOLA | IMMUNE SYSTEM | 11/24/16 | Crystal structure of anti-T4 Fab fragment with tetraiodoBPA | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Parkkinen, T., Rouvinen, J. | 2.801 | X-RAY DIFFRACTION | 0.291 | 0.221 | false | true | IGHV5 | IGKV4 | Kappa | null | null | null | null | null |
7pi2 | H | I | 0 | G | protein | null | cysteine-rich protective antigen | IMMUNE SYSTEM | 08/19/21 | PfCyRPA bound to monoclonal antibody Cy.003 Fab fragment | PLASMODIUM FALCIPARUM (ISOLATE 3D7); GALLUS GALLUS | gallus gallus | gallus gallus | plasmodium falciparum (isolate 3d7) | Ragotte, R.J., Higgins, M.K. | 3.14 | X-RAY DIFFRACTION | 0.239 | 0.219 | false | true | unknown | unknown | unknown | null | null | null | null | null |
4o9h | H | L | 0 | A | protein | null | interleukin-6 | IMMUNE SYSTEM | 01/02/14 | Structure of Interleukin-6 in complex with a Camelid Fab fragment | HOMO SAPIENS; LLAMA GLAMA | lama glama | lama glama | homo sapiens | Klarenbeek, A., Blanchetot, C., Schragel, G., Sadi, A.S., Ongenae, N., Hemrika, W., Wijdenes, J., Spinelli, S., Desmyter, A., Cambillau, C., Hultberg, A., Kretz-rommel, A., Dreier, T., De haard, H.J.W., Roovers, R.C. | 2.42 | X-RAY DIFFRACTION | 0.244 | 0.216 | false | true | IGHV3 | IGLV8 | Lambda | null | null | null | null | null |
2kqn | null | B | 3 | null | null | null | null | IMMUNE SYSTEM | 11/11/09 | Solution structure of the AL-09 H87Y immunoglobulin light chain variable domain | HOMO SAPIENS | null | homo sapiens | null | Volkman, B.F., Peterson, F.C., Ramirez-Alvarado, M., Baden, E.M. | NOT | SOLUTION NMR | null | null | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
7wkx | A | C | 0 | F | protein | null | interleukin-17a | CYTOKINE | 01/12/22 | IL-17A in complex with the humanized antibody HB0017 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Xu, J., Zhu, X., He, Y. | 2.81 | X-RAY DIFFRACTION | 0.254 | 0.206 | false | true | IGHV7 | IGKV2 | Kappa | null | null | null | null | null |
6o2a | C | D | 0 | G | N | peptide | protein | NA | NA | circumsporozoite protein | anti-kappa vhh domain | IMMUNE SYSTEM | 02/22/19 | Crystal structure of 4493 Fab in complex with circumsporozoite protein NDN and anti-kappa VHH domain | HOMO SAPIENS; LAMA GLAMA; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | plasmodium falciparum | lama glama | Scally, S.W., Bosch, A., Prieto, K., Murugan, R., Wardemann, H., Julien, J.P. | 2.15 | X-RAY DIFFRACTION | 0.221 | 0.193 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
5y2m | I | J | 0 | D | A | C | protein | protein | protein | NA | NA | NA | hemagglutinin | hemagglutinin | hemagglutinin | IMMUNE SYSTEM | 07/26/17 | Crystal structure of a group 2 HA binding antibody AF4H1K1 Fab in complex with the H4N6 duck isolate (H4-CZ/56) hemagglutinin | INFLUENZA A VIRUS (STRAIN A/DUCK/CZECHOSLOVAKIA/1956 H4N6); HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus (straina/duck/czechoslovakia/1956 h4n6) | influenza a virus (straina/duck/czechoslovakia/1956 h4n6) | influenza a virus (straina/duck/czechoslovakia/1956 h4n6) | Xiao, H., Qi, J., Gao, F.G. | 3.8 | X-RAY DIFFRACTION | 0.277 | 0.236 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
6bft | A | B | 0 | G | protein | null | vascular endothelial growth factor a | IMMUNE SYSTEM | 10/27/17 | Structure of Bevacizumab Fab mutant in complex with VEGF | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Christie, M., Christ, D. | 2.55 | X-RAY DIFFRACTION | 0.220 | 0.170 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7kbt | E | F | 0 | A | protein | null | coagulation factor viii,coagulation factor viii,coagulationfactor viii,coagulation factor viii,coagulation factor viii | BLOOD CLOTTING/Immune System | 10/02/20 | Factor VIII in complex with the anti-C2 domain antibody, G99 | SUS SCROFA; HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | sus scrofa, homo sapiens | Ronayne, E.K., Gish, J., Wilson, C., Peters, S., Spencer, H.T., Spiegel, P.C., Childers, K.C. | 4.15 | X-RAY DIFFRACTION | 0.338 | 0.300 | false | true | IGHV1 | IGKV9 | Kappa | null | null | null | null | null |
4xcn | G | I | 0 | null | null | null | null | IMMUNE SYSTEM | 12/18/14 | Crystal structure of human 4E10 Fab in complex with phosphatidic acid (06:0 PA); 2.9 A resolution | HOMO SAPIENS | homo sapiens | homo sapiens | null | Irimia, A., Stanfield, R.L., Wilson, I.A. | 2.9 | X-RAY DIFFRACTION | 0.246 | 0.193 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
3i2c | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 06/29/09 | Crystal structure of anti-IL-23 antibody CNTO4088 | MUS MUSCULUS | mus musculus | mus musculus | null | Teplyakov, A., Obmolova, G., Gilliland, G.L. | 2.8 | X-RAY DIFFRACTION | 0.235 | 0.196 | false | true | IGHV10 | IGKV3 | Kappa | null | null | null | null | null |
5ujz | G | g | 0 | A | protein | null | hemagglutinin ha1 | VIRAL PROTEIN/IMMUNE SYSTEM | 01/19/17 | CryoEM structure of an influenza virus receptor-binding site antibody-antigen interface - Class 1 | HOMO SAPIENS; INFLUENZA A VIRUS; INFLUENZA A VIRUS (A/SOLOMON ISLANDS/3/2006(H1N1)) | homo sapiens | null | influenza a virus (a/solomonislands/3/2006(h1n1)) | Liu, Y., Pan, J., Caradonna, T., Jenni, S., Raymond, D.D., Schmidt, A.G., Harrison, S.C., Grigorieff, N. | 4.8 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
6mui | G | H | 0 | F | protein | null | e2 | VIRUS/IMMUNE SYSTEM | 10/23/18 | CryoEM structure of chimeric Eastern Equine Encephalitis Virus with Fab of EEEV-42 antibody | EASTERN EQUINE ENCEPHALITIS VIRUS; MUS MUSCULUS | mus musculus | mus musculus | eastern equine encephalitis virus | Hasan, S.S., Sun, C., Kim, A.S., Watanabe, Y., Chen, C.L., Klose, T., Buda, G., Crispin, M., Diamond, M.S., Klimstra, W.B., Rossmann, M.G. | 7.7 | ELECTRON MICROSCOPY | null | null | false | false | IGHV9 | IGLV1 | Lambda | null | null | null | null | null |
1fe8 | H | L | 0 | A | protein | null | von willebrand factor | IMMUNE SYSTEM | 07/21/00 | CRYSTAL STRUCTURE OF THE VON WILLEBRAND FACTOR A3 DOMAIN IN COMPLEX WITH A FAB FRAGMENT OF IGG RU5 THAT INHIBITS COLLAGEN BINDING | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Bouma, B., Huizinga, E.G., Schiphorst, M.E., Sixma, J.J., Kroon, J., Gros, P. | 2.03 | X-RAY DIFFRACTION | 0.264 | 0.227 | false | false | IGHV2 | IGKV10 | Kappa | 0.000002 | -7.774786 | Unknown | null | TBD |
5mp1 | C | D | 0 | B | peptide | null | microtubule-associated protein tau | IMMUNE SYSTEM | 12/15/16 | Crystal structure of DC8E8 Fab in the complex with a 14-mer tau peptide at pH 7.5 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | Skrabana, R., Novak, M., Cehlar, O., Kontsekova, E. | 3.1 | X-RAY DIFFRACTION | 0.268 | 0.222 | false | false | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
6urm | D | E | 0 | C | protein | null | hemagglutinin | IMMUNE SYSTEM/VIRAL PROTEIN | 10/23/19 | Crystal structure of vaccine-elicited receptor-binding site targeting antibody LPAF-a.01 in complex with Hemagglutinin H1 A/California/04/2009 | INFLUENZA A VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus | Zhou, T., Cheung, S.F., Kwong, P.D. | 2.65 | X-RAY DIFFRACTION | 0.262 | 0.215 | false | true | IGHV2 | IGLV3 | Lambda | null | null | null | null | null |
7s4s | H | L | 0 | A | protein | null | spike protein s1 | VIRAL PROTEIN/Immune System | 09/09/21 | Crystal Structure of SARS-CoV-2 S receptor-binding domain (RBD) in complex CoV11 Fab | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Tolbert, W.D., Pazgier, M. | 2.05 | X-RAY DIFFRACTION | 0.198 | 0.166 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
5gz0 | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 09/26/16 | Crystal structure of FM329, a recombinant Fab adopted from cetuximab | HOMO SAPIENS/MUS MUSCULUS XENOGRAFT | homo sapiens/mus musculus xenograft | homo sapiens/mus musculus xenograft | null | Sim, D.W., Kim, J.H., Kim, Y.P., Won, H.S. | 1.7 | X-RAY DIFFRACTION | 0.227 | 0.188 | false | true | IGHV2 | IGKV5 | Kappa | null | null | null | null | null |
3d0v | B | A | 0 | C | peptide | null | gp41 peptide lleldkwaslw | IMMUNE SYSTEM | 05/02/08 | Crystal structure of the HIV-1 Cross Neutralizing Monoclonal Antibody 2F5 in complex with gp41 Peptide LLELDKWASLW | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | null | Bryson, S., Julien, J.P., Pai, E.F. | 2.05 | X-RAY DIFFRACTION | 0.232 | 0.218 | false | false | IGHV2 | IGKV1 | Kappa | null | null | null | null | null |
3ztj | I | J | 0 | D | C | protein | protein | NA | NA | hemagglutinin ha2 chain | hemagglutinin ha1 chain | IMMUNE SYSTEM/VIRAL PROTEIN | 07/08/11 | Structure of influenza A neutralizing antibody selected from cultures of single human plasma cells in complex with human H3 Influenza haemagglutinin. | HOMO SAPIENS; INFLUENZA A VIRUS | homo sapiens | homo sapiens | influenza a virus | influenza a virus | Voss, J.E., Vachieri, S.G., Gamblin, S.J., Collins, P.J., Haire, L.F., Skehel, J.J. | 3.41 | X-RAY DIFFRACTION | 0.28434 | 0.23410 | false | true | IGHV3 | IGKV4 | Kappa | null | null | null | null | null |
1opg | H | L | 0 | null | null | null | null | IMMUNOGLOBULIN | 04/28/95 | OPG2 FAB FRAGMENT | HOMO SAPIENS | homo sapiens | homo sapiens | null | Kodandapani, R., Veerapandian, B., Ely, K.R. | 2.0 | X-RAY DIFFRACTION | unknown | unknown | false | false | IGHV5 | IGKV5 | Kappa | null | null | null | null | null |
4jg0 | H | L | 0 | P | peptide | null | phosphopeptide | immune system | 02/28/13 | Structure of phosphoserine/threonine (pSTAb) scaffold bound to pSer peptide | ESCHERICHIA COLI; SYNTHETIC CONSTRUCT | null | null | null | Koerber, J.T., Thomsen, N.D., Hannigan, B.T., Degrado, W.F., Wells, J.A. | 1.81 | X-RAY DIFFRACTION | 0.202 | 0.161 | false | true | IGHV3 | IGKV3 | Kappa | 0 | -9.22839 | Unknown | null | TBD |
3j2z | F | E | 0 | null | null | null | null | IMMUNE SYSTEM | 01/28/13 | Electron Cryo-microscopy of Chikungunya VLP in complex with neutralizing antibody Fab m10 | MUS MUSCULUS | mus musculus | mus musculus | null | Sun, S., Xiang, Y., Rossmann, M.G. | 16.9 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
7q9m | E | F | 0 | B | protein | null | surface glycoprotein | Viral Protein/Immune System | 11/12/21 | Beta-53 fab in complex with SARS-CoV-2 beta-Spike glycoprotein | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Duyvesteyn, H.M.E., Ren, J., Stuart, D.I. | 3.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV5 | IGKV3 | Kappa | null | null | null | null | null |
6mnf | M | K | 0 | M | carbohydrate | BMA | polysaccharide | IMMUNE SYSTEM | 10/01/18 | Anti-HIV-1 Fab 2G12 + Man8 re-refinement | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Calarese, D.A., Stanfield, R.L., Wilson, I.A. | 2.758 | X-RAY DIFFRACTION | 0.252 | 0.218 | false | true | unknown | IGKV1 | Kappa | 0.000001 | -8.030018 | Unknown | null | TBD |
5vxl | B | null | 0 | A | protein | null | invasin ipad | IMMUNE SYSTEM | 05/23/17 | 2.80 A resolution structure of IpaD from Shigella flexneri in complex with single-domain antibody JPS-G3 | SHIGELLA FLEXNERI; VICUGNA PACOS | vicugna pacos | null | shigella flexneri | Barta, M.L., Lovell, S., Battaile, K.P., Picking, W.D., Picking, W.L. | 2.8 | X-RAY DIFFRACTION | 0.273 | 0.202 | false | true | IGHV1 | null | null | null | null | null | null | null |
1ggi | J | M | 0 | Q | peptide | null | hiv-1 v3 loop peptide antigen | IMMUNOGLOBULIN | 04/02/93 | CRYSTAL STRUCTURE OF AN HIV-1 NEUTRALIZING ANTIBODY 50.1 IN COMPLEX WITH ITS V3 LOOP PEPTIDE ANTIGEN | MUS MUSCULUS | null | mus musculus | null | Stanfield, R.L., Rini, J.M., Wilson, I.A. | 2.8 | X-RAY DIFFRACTION | unknown | 0.188 | false | true | IGHV8 | IGKV3 | Kappa | null | null | null | null | null |
6ml8 | H | L | 0 | A | protein | null | hemagglutinin | VIRAL PROTEIN | 09/27/18 | Crystal structure of hemagglutinin from H1N1 Influenza A virus A/Denver/57 bound to the C05 antibody | INFLUENZA A VIRUS; INFLUENZA A VIRUS (A/DENVER/1957(H1N1)); HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus | Seattle Structural Genomics Center for Infectious Disease (SSGCID) | 2.92 | X-RAY DIFFRACTION | 0.264 | 0.201 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
1mck | null | A | 0 | P | peptide | null | peptide n-acetyl-d-glu-l-his-d-pro-nh2 | IMMUNOGLOBULIN | 02/25/93 | PRINCIPLES AND PITFALLS IN DESIGNING SITE DIRECTED PEPTIDE LIGANDS | HOMO SAPIENS | null | homo sapiens | null | Edmundson, A.B., Harris, D.L., Fan, Z.-C., Guddat, L.W. | 2.7 | X-RAY DIFFRACTION | unknown | unknown | false | true | null | IGLV2 | Lambda | null | null | null | null | null |
7ly3 | F | E | 0 | B | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 03/05/21 | Crystal structure of SARS-CoV-2 S NTD bound to S2M28 Fab | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID) | 3.0 | X-RAY DIFFRACTION | 0.234 | 0.209 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
6bli | A | B | 0 | C | peptide | null | major surface glycoprotein g | VIRAL PROTEIN/IMMUNE SYSTEM | 11/10/17 | RSV G peptide bound to Fab CB002.5 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human respiratory syncytial virus a (strainrsb6256) | Jones, H.G., McLellan, J.S., Langedijk, J.P. | 2.12 | X-RAY DIFFRACTION | 0.218 | 0.169 | false | true | IGHV4 | IGKV1 | Kappa | 0 | -12.665638 | Unknown | null | TBD |
4u6v | K | M | 0 | B | protein | null | alpha-hemolysin | IMMUNE SYSTEM | 07/29/14 | Mechanisms of Neutralization of a Human Anti-Alpha Toxin Antibody | HOMO SAPIENS; STAPHYLOCOCCUS AUREUS SUBSP. AUREUS TCH60 | homo sapiens | homo sapiens | staphylococcus aureus subsp. aureus tch60 | Oganesyan, V.Y., Peng, L., Damschroder, M.M., Cheng, L., Sadowska, A., Tkaczyk, C., Sellman, B., Wu, H., Dall'Acqua, W.F. | 2.56 | X-RAY DIFFRACTION | 0.235 | 0.198 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -15.006685 | SPR | null | TBD |
6lpb | N | null | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(s) subunit alphaisoforms short,guanine nucleotide-binding protein g(s) subunit alpha isoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | SIGNALING PROTEIN/HORMONE | 01/09/20 | Cryo-EM structure of the human PAC1 receptor coupled to an engineered heterotrimeric G protein | HOMO SAPIENS; RATTUS NORVEGICUS; UNIDENTIFIED; BOS TAURUS; SYNTHETIC CONSTRUCT | unidentified | null | homo sapiens | rattus norvegicus | Kobayashi, K., Shihoya, W., Nishizawa, T., Nureki, O. | 3.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null |
4p2c | K | null | 0 | F | protein | null | shiga toxin 2e, subunit b | TOXIN | 03/03/14 | Complex of Shiga toxin 2e with a neutralizing single-domain antibody | ESCHERICHIA COLI; LAMA GLAMA | lama glama | null | escherichia coli | Lo, A.W.H., Moonens, K., De Kerpel, M., Brys, L., Pardon, E., Remaut, H., De Greve, H. | 2.818 | X-RAY DIFFRACTION | 0.253 | 0.187 | false | true | IGHV1 | null | null | null | null | null | null | null |
6grz | null | B | 0 | null | null | null | null | IMMUNE SYSTEM | 06/13/18 | Crystal structure of the light chain dimer mH6 | HOMO SAPIENS | null | homo sapiens | null | Maritan, M., Ricagno, S., Ambrosetti, A., Oberti, L. | 2.1 | X-RAY DIFFRACTION | 0.238 | 0.206 | false | true | null | IGLV1 | Lambda | null | null | null | null | null |
6n7j | H | L | 0 | C | peptide | null | envelope glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 11/27/18 | BDBV223 Fab bound to synthetic peptide of Bundibugyo virus Glycoprotein Stalk | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | bundibugyo ebolavirus | King, L.B., West, B.R., Saphire, E.O. | 3.684 | X-RAY DIFFRACTION | 0.254 | 0.228 | false | true | IGHV4 | IGKV3 | Kappa | null | null | null | null | null |
3cmo | Y | X | 0 | null | null | null | null | Immune System | 03/24/08 | HIV neutralizing monoclonal antibody YZ18 | MUS MUSCULUS | mus musculus | mus musculus | null | Jin, L., Prasad, V., Paul, S. | 2.3 | X-RAY DIFFRACTION | 0.287 | 0.248 | false | false | IGHV1 | IGKV10 | Kappa | null | null | null | null | null |
3eo1 | E | D | 0 | F | protein | null | transforming growth factor beta-3 | IMMUNE SYSTEM/CYTOKINE | 09/26/08 | Structure of the Fab Fragment of GC-1008 in Complex with Transforming Growth Factor-Beta 3 | MUS MUSCULUS; HOMO SAPIENS | mus musculus | mus musculus | homo sapiens | Gruetter, C., Gruetter, M.G. | 3.1 | X-RAY DIFFRACTION | 0.279 | 0.255 | false | true | IGHV1 | IGKV8 | Kappa | 0 | -13.09 | Other | null | 19073914 |
5c9k | null | B | 0 | null | null | null | null | IMMUNE SYSTEM | 06/27/15 | Crystal structure of a highly fibrillogenic Arg24Gly mutant of the Recombinant variable domain 6AJL2 | HOMO SAPIENS | null | homo sapiens | null | Hernandez-Santoyo, A., Rodriguez-Romero, A., Luna-Martinez, O.D., Becerril-Lujan, B. | 1.92 | X-RAY DIFFRACTION | 0.219 | 0.170 | false | true | null | IGLV6 | Lambda | null | null | null | null | null |
2h2p | C | D | 0 | A | protein | null | clc cl transporter | ION TRANSPORT | 05/19/06 | Crystal structure of CLC-ec1 in complex with Fab fragment in SeCN- | ESCHERICHIA COLI; MUS MUSCULUS | mus musculus | mus musculus | escherichia coli | Nguitragool, W., Miller, C. | 3.1 | X-RAY DIFFRACTION | 0.280 | 0.278 | false | false | IGHV4 | IGKV4 | Kappa | null | null | null | null | null |
2a1w | I | M | 0 | null | null | null | null | IMMUNE SYSTEM | 06/21/05 | Anti-cocaine antibody 7.5.21, crystal form I | MUS MUSCULUS | mus musculus | mus musculus | null | Pozharski, E., Hewagama, A., Shanafelt, A., Ringe, D., Petsko, G.A. | 2.7 | X-RAY DIFFRACTION | 0.247 | 0.185 | false | false | IGHV5 | IGKV1 | Kappa | null | null | null | null | null |
2bjm | H | L | 0 | H | Hapten | ANF | ANTHRONE | ANTIBODY | 02/04/05 | SPE7:Anthrone Complex | RATTUS RATTUS | rattus rattus | rattus rattus | rattus rattus | Tawfik, Leo C James Dan S | 2.15 | X-RAY DIFFRACTION | 0.286 | 0.268 | false | true | IGHV1 | IGLV1 | Lambda | 0.0002 | -5.046298 | Unknown | null | TBD |
4nc0 | B | null | 0 | A | protein | null | cell wall-binding repeat protein | IMMUNE SYSTEM | 10/23/13 | Crystal Structure of TcdA-A2 Bound to A26.8 VHH | CLOSTRIDIUM DIFFICILE; LAMA GLAMA | lama glama | null | clostridium difficile | Murase, T., Eugenio, L., Schorr, M., Hussack, G., Tanha, J., Kitova, E.N., Klassen, J.S., Ng, K.K.S. | 2.3 | X-RAY DIFFRACTION | 0.223 | 0.199 | false | true | IGHV1 | null | null | null | null | null | null | null |
5vl3 | C | D | 0 | S | protein | null | b-cell receptor cd22 | IMMUNE SYSTEM | 04/24/17 | CD22 d1-d3 in complex with therapeutic Fab Epratuzumab | HOMO SAPIENS; MUS MUSCULUS | mus musculus, homo sapiens | mus musculus, homo sapiens | homo sapiens | Sicard, T., Ereno-Orbea, J., Julien, J.P. | 3.1 | X-RAY DIFFRACTION | 0.295 | 0.280 | false | true | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
3b9v | A | null | 0 | null | null | null | null | IMMUNE SYSTEM | 11/06/07 | Crystal Structure of an Autonomous VH Domain | HOMO SAPIENS | homo sapiens | null | null | Appleton, B.A., Barthelemy, P.A., Wiesmann, C. | 1.8 | X-RAY DIFFRACTION | 0.200 | 0.155 | false | true | IGHV3 | null | null | null | null | null | null | null |
5hj3 | A | B | 0 | P | O | protein | protein | NA | NA | envelope glycoprotein | envelope glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 01/12/16 | Crystal structure of host-primed Ebola virus GP, GPcl. | EBOLA VIRUS SP.; ZAIRE EBOLAVIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | zaire ebolavirus | ebola virus sp. | Bornholdt, Z.A., Fusco, M.L., Saphire, E.O. | 3.3 | X-RAY DIFFRACTION | 0.258 | 0.227 | false | true | IGHV3 | IGKV4 | Kappa | null | null | null | null | null |
3cm9 | B | M | 7 | null | null | null | null | IMMUNE SYSTEM | 03/21/08 | Solution Structure of Human SIgA2 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Bonner, A., Almogren, A., Furtado, P.B., Kerr, M.A., Perkins, S.J. | NOT | SOLUTION SCATTERING | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
4mxw | H | L | 0 | A | protein | null | lymphotoxin-alpha | CYTOKINE/IMMUNE SYSTEM | 09/26/13 | Structure of heterotrimeric lymphotoxin LTa1b2 bound to lymphotoxin beta receptor LTbR and anti-LTa Fab | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Sudhamsu, J., Yin, J.P., Hymowitz, S.G. | 3.6 | X-RAY DIFFRACTION | 0.296 | 0.231 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
1y18 | F | E | 0 | E | Hapten | HAN | 2-AMINO-5,6-DIMETHYL-BENZIMIDAZOLE-1-PENTANOIC ACID | immune system | 11/17/04 | Fab fragment of catalytic elimination antibody 34E4 E(H50)D mutant in complex with hapten | MUS MUSCULUS, HOMO SAPIENS | mus musculus, homo sapiens | mus musculus, homo sapiens | mus musculus, homo sapiens | Debler, E.W., Ito, S., Heine, A., Wilson, I.A. | 2.8 | X-RAY DIFFRACTION | 0.252 | 0.215 | false | true | IGHV4 | IGLV1 | Lambda | null | null | null | null | null |
4m1d | I | M | 0 | Q | peptide | null | cyclic v3 arch peptide | IMMUNE SYSTEM | 08/02/13 | Crystal structure of anti-HIV-1 Fab 447-52D in complex with V3 cyclic peptide MN | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | null | Killikelly, A., Kong, X.P. | 1.8 | X-RAY DIFFRACTION | 0.216 | 0.186 | false | true | IGHV3 | IGLV1 | Lambda | 0 | -10.420468 | Unknown | null | TBD |
3nh7 | J | N | 0 | C | protein | null | bone morphogenetic protein receptor type-1a | IMMUNE SYSTEM | 06/14/10 | Crystal structure of the neutralizing Fab fragment AbD1556 bound to the BMP type I receptor IA | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Mueller, T.D., Harth, S., Sebald, W. | 2.7 | X-RAY DIFFRACTION | 0.280 | 0.234 | false | true | IGHV3 | IGLV3 | Lambda | 0 | -10.5 | SPR | 25 | 20927405 |
1oay | J | N | 0 | J | Hapten | FUR | FURAZOLIDONE | IMMUNE SYSTEM | 01/21/03 | Antibody multispecificity mediated by conformational diversity | RATTUS RATTUS | rattus rattus | rattus rattus | rattus rattus | James, L.C., Roversi, P., Tawfik, D. | 2.66 | X-RAY DIFFRACTION | 0.280 | 0.258 | false | true | IGHV1 | IGLV1 | Lambda | 0.000001 | null | Other | 20 | 12610298 |
6e5p | 2 | 1 | 0 | 2 | carbohydrate | NAG | polysaccharide | VIRAL PROTEIN | 07/21/18 | Backbone model based on cryo-EM map at 8.5 A of domain-swapped, glycan-reactive, neutralizing antibody 2G12 bound to HIV-1 Env BG505 DS-SOSIP, which was also bound to CD4-binding site antibody VRC03 | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | homo sapiens | Acharya, P., Kwong, P.D. | 8.8 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null |
4p9h | H | L | 0 | G | protein | null | envelope glycoprotein gp160 | VIRAL PROTEIN/IMMUNE SYSTEM | 04/04/14 | Crystal structure of 8ANC195 Fab in complex with gp120 of 93TH057 HIV-1 and soluble CD4 D1D2 | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Scharf, L., Bjorkman, P.J. | 3.0 | X-RAY DIFFRACTION | 0.272 | 0.235 | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null |
6did | D | C | 0 | F | I | protein | protein | NA | NA | envelope glycoprotein gp160 | envelope glycoprotein gp160 | VIRAL PROTEIN | 05/23/18 | HIV Env BG505 SOSIP with polyclonal Fabs from immunized rabbit #3417 post-boost#1 | HUMAN IMMUNODEFICIENCY VIRUS 1; ORYCTOLAGUS CUNICULUS | oryctolagus cuniculus | oryctolagus cuniculus | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Turner, H.L., Cottrell, C.A., Oyen, D., Wilson, I.A., Ward, A.B. | 4.71 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7aqg | C | null | 0 | A | protein | null | plasminogen activator inhibitor 1 | HYDROLASE | 10/21/20 | Crystal Structure of Small Molecule Inhibitor TM5484 Bound to Stabilized Active Plasminogen Activator Inhibitor-1 (PAI-1-W175F) | HOMO SAPIENS; VICUGNA PACOS | vicugna pacos | null | homo sapiens | Sillen, M., Strelkov, S.V., Declerck, P.J. | 2.27 | X-RAY DIFFRACTION | 0.268 | 0.215 | false | true | IGHV1 | null | null | null | null | null | null | null |
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