pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 354
values | r_factor stringclasses 342
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
7ebz | E | F | 0 | B | A | C | protein | protein | protein | NA | NA | NA | capsid protein vp2 | capsid protein vp1 | capsid protein vp3 | VIRUS | 03/11/21 | EV-D68 in complex with 2H12 Fab (state S1) | HUMAN ENTEROVIRUS D68; MUS MUSCULUS | mus musculus | mus musculus | human enterovirus d68 | human enterovirus d68 | human enterovirus d68 | Xu, C., Cong, Y. | 3.09 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV9 | Kappa | null | null | null | null | null |
5vsh | C | D | 0 | null | null | null | null | IMMUNE SYSTEM | 05/11/17 | CH1/Clambda Fab based on Pertuzumab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Hendle, J. | 2.55 | X-RAY DIFFRACTION | 0.255 | 0.207 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7fcp | H | L | 0 | A | protein | null | spike protein s1 | ANTIVIRAL PROTEIN | 07/15/21 | Crystallographic structure of two neutralizing antibodies in complex with SARS-CoV-2 spike receptor-binding Domain (RBD) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zheng, P., Jin, T. | 2.4 | X-RAY DIFFRACTION | 0.245 | 0.191 | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null |
4j4p | H | L | 0 | A | protein | null | ig epsilon chain c region | IMMUNE SYSTEM | 02/07/13 | The complex of human IgE-Fc with two bound Fab fragments | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Drinkwater, N., Sutton, B.J. | 2.91 | X-RAY DIFFRACTION | 0.284 | 0.236 | false | true | IGHV6 | IGLV1 | Lambda | 0 | -10.092596 | SPR | null | TBD |
3upa | null | B | 0 | null | null | null | null | IMMUNE SYSTEM | 11/17/11 | A general strategy for the generation of human antibody variable domains with increased aggregation resistance | HOMO SAPIENS | null | homo sapiens | null | Dudgeon, K., Rouet, R., Kokmeijer, I., Langley, D.B., Christ, D. | 1.8 | X-RAY DIFFRACTION | 0.283 | 0.229 | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
6y6c | D | d | 0 | A | protein | null | triggering receptor expressed on myeloid cells 2 | IMMUNE SYSTEM | 02/26/20 | TREM2 extracellular domain (19-174) in complex with single-chain variable fragment (scFv-4) | HOMO SAPIENS | homo sapiens | null | homo sapiens | Szykowska, A., Preger, C., Williams, E., Mukhopadhyay, S.M.M., McKinley, G., Gruslund, S., Wigren, E., Persson, H., Arrowsmith, C.H., Edwards, A., von Delft, F., Bountra, C., Davis, J.B., Di Daniel, E., Burgess-Brown, N., Bullock, A. | 2.26 | X-RAY DIFFRACTION | 0.216 | 0.191 | true | true | unknown | unknown | unknown | null | null | null | null | null |
5wdu | T | S | 0 | Q | protein | null | envelope glycoprotein gp160 | IMMUNE SYSTEM | 07/06/17 | HIV-1 Env BG505 SOSIP.664 H72C-H564C trimer in complex with bNAbs PGT122 Fab, 35O22 Fab and NIH45-46 scFv | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Julien, J.-P., Torrents de la Pena, A., Sanders, R.W., Wilson, I.A. | 7.0 | X-RAY DIFFRACTION | 0.363 | 0.301 | false | true | IGHV4 | unknown | unknown | null | null | null | null | null |
7rdw | G | I | 0 | N | protein | null | glycoprotein 120 | IMMUNE SYSTEM | 07/12/21 | Crystal Structure of FH1 Fab bound to HXb2 HIV-1 gp120 core | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Weidle, C., Pancera, M. | 3.55 | X-RAY DIFFRACTION | 0.295 | 0.260 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
4w2o | E | null | 0 | F | protein | null | nucleoprotein | IMMUNE SYSTEM | 08/17/17 | Anti-Marburgvirus Nucleoprotein Single Domain Antibody B Complexed with Nucleoprotein C-terminal domain | LAMA GLAMA; LAKE VICTORIA MARBURGVIRUS (STRAIN MUSOKE-80) | lama glama | null | lake victoria marburgvirus (strain musoke-80) | Taylor, A.B., Garza, J.A. | 3.2 | X-RAY DIFFRACTION | 0.285 | 0.227 | false | true | IGHV1 | null | null | null | null | null | null | null |
7p5w | K | null | 0 | E | protein | null | volume-regulated anion channel subunit lrrc8a | MEMBRANE PROTEIN | 07/15/21 | Structure of homomeric LRRC8A Volume-Regulated Anion Channel in complex with synthetic nanobody Sb2 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | synthetic construct | null | mus musculus | Deneka, D., Rutz, S., Sawicka, M. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
1r0a | H | L | 0 | B | protein | null | reverse transcriptase | Transferase/immune system/DNA | 09/19/03 | Crystal structure of HIV-1 reverse transcriptase covalently tethered to DNA template-primer solved to 2.8 angstroms | HUMAN IMMUNODEFICIENCY VIRUS 1; MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | human immunodeficiency virus 1 | Tuske, S., Ding, J., Arnold, E. | 2.8 | X-RAY DIFFRACTION | 0.272 | 0.239 | false | false | IGHV8 | IGKV10 | Kappa | null | null | null | null | null |
7vyr | H | L | 0 | R | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 11/15/21 | Crystal structure of SARS-CoV-2 Spike RBD in complex with the D27 neutralizing antibody Fab fragment | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Jeong, B.-S., Oh, B.-H. | 2.2 | X-RAY DIFFRACTION | 0.235 | 0.192 | false | true | IGHV1 | IGLV3 | Lambda | null | null | null | null | null |
5iv2 | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 03/18/16 | Cetuximab Fab in complex with Arg9Cir meditope variant | MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT | mus musculus, homo sapiens | mus musculus, homo sapiens | null | Bzymek, K.P., Williams, J.C. | 2.481 | X-RAY DIFFRACTION | 0.211 | 0.165 | false | true | IGHV2 | IGKV5 | Kappa | null | null | null | null | null |
2kqm | null | A | 5 | null | null | null | null | IMMUNE SYSTEM | 11/11/09 | Solution structure of the KI O18/O8 Y87H immunoglobulin light chain variable domain | HOMO SAPIENS | null | homo sapiens | null | Volkman, B.F., Peterson, F.C., Ramirez-Alvarado, M., Baden, E.M. | NOT | SOLUTION NMR | null | null | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
6df2 | H | L | 0 | D | peptide | null | leu-ptr-leu | IMMUNE SYSTEM | 05/13/18 | Improved anti-phosphotyrosine antibody 4G10-S5-4D5 Fab complexed with phosphotyrosine peptide | SYNTHETIC CONSTRUCT | synthetic construct | synthetic construct | synthetic construct | Mou, K., Leung, K., Wells, J.A. | 2.6 | X-RAY DIFFRACTION | 0.230 | 0.177 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -9.88068 | Unknown | null | TBD |
5a2l | H | h | 0 | P | peptide | null | modified antigen tn | IMMUNE SYSTEM | 05/20/15 | Crystal structure of scFv-SM3 in complex with APD-CGalNAc-RP | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | null | homo sapiens | Martinez-Saez, N., Castro-Lopez, J., Valero-Gonzalez, J., Madariaga, D., Companon, I., Somovilla, V.J., Salvado, M., Asensio, J.L., Jimenez-Barbero, J., Avenoza, A., Busto, J.H., Bernardes, G.J.L., Peregrina, J.M., Hurtado-Guerrero, R., Corzana, F. | 1.79 | X-RAY DIFFRACTION | 0.20447 | 0.18442 | true | true | unknown | unknown | unknown | null | null | null | null | null |
7kzx | D | C | 0 | B | protein | null | cadmium and zinc efflux pump fief | MEMBRANE PROTEIN | 12/10/20 | Cryo-EM structure of YiiP-Fab complex in Apo state | SHEWANELLA ONEIDENSIS; HOMO SAPIENS | homo sapiens | homo sapiens | shewanella oneidensis | Lopez-Redondo, M.L., Fan, S., Koide, A., Koide, S., Beckstein, O., Stokes, D.L. | 4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5fhb | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 12/21/15 | Crystal Structure of Protective Ebola Virus Antibody 100 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Gilman, M.S.A., McLellan, J.S. | 1.973 | X-RAY DIFFRACTION | 0.194 | 0.159 | false | true | IGHV4 | IGLV3 | Lambda | null | null | null | null | null |
5vz1 | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 05/26/17 | Crystal structure of the Apo Antibody fragment (Fab) raised against C-terminal domain of Ebola nucleoprotein (EBOV, TAFV, BDBV strains) | HOMO SAPIENS | homo sapiens | homo sapiens | null | Radwanska, M.J., Derewenda, U., Kossiakoff, A., Derewenda, Z.S. | 2.112 | X-RAY DIFFRACTION | 0.268 | 0.218 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5vkd | H | L | 0 | A | protein | null | nucleoprotein | IMMUNE SYSTEM | 04/21/17 | Crystal structure of C-terminal domain of Ebola (Bundibugyo) nucleoprotein in complex with Fab fragment | BUNDIBUGYO EBOLAVIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | bundibugyo ebolavirus | Radwanska, M.J., Derewenda, U., Kossiakoff, A., Derewenda, Z.S. | 1.749 | X-RAY DIFFRACTION | 0.202 | 0.176 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7l3n | D | E | 0 | B | C | protein | protein | NA | NA | spike glycoprotein | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 12/18/20 | SARS-CoV 2 Spike Protein bound to LY-CoV555 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | severe acute respiratory syndrome coronavirus2 | Goldsmith, J.A., McLellan, J.S. | 3.27 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
1sbs | H | L | 0 | null | null | null | null | MONOCLONAL ANTIBODY | 04/08/98 | CRYSTAL STRUCTURE OF AN ANTI-HCG FAB | MUS MUSCULUS | mus musculus | mus musculus | null | Fotinou, C., Beauchamp, J., Emsley, P., Dehaan, A., Schielen, W.J.G., Bos, E., Isaacs, N.W. | 2.0 | X-RAY DIFFRACTION | 0.240 | 0.180 | false | false | IGHV6 | IGKV8 | Kappa | null | null | null | null | null |
6iyn | A | null | 14 | null | null | null | null | AFLATOXIN B1-BINDING PROTEIN | 12/17/18 | Solution structure of camelid nanobody Nb26 against aflatoxin B1 | VICUGNA PACOS | vicugna pacos | null | null | Nie, Y., He, T., Zhu, J., Li, S.L., Hu, R., Yang, Y.H. | NOT | SOLUTION NMR | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
3eyf | B | A | 0 | E | peptide | null | synthetic peptide | IMMUNE SYSTEM | 10/20/08 | Crystal structure of anti-human cytomegalovirus antibody 8f9 plus gB peptide | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | null | Thomson, C.A., Bryson, S., McLean, G.R., Creagh, A.L., Pai, E.F., Schrader, J.W. | 2.3 | X-RAY DIFFRACTION | 0.230 | 0.210 | false | true | IGHV3 | IGKV3 | Kappa | 0 | -9.3 | ITC | 24 | 18772881 |
7bbj | M | N | 0 | B | protein | null | 5'-nucleotidase | IMMUNE SYSTEM | 12/17/20 | CD73 in complex with the humanized antagonistic antibody mAb19 | HOMO SAPIENS; UNIDENTIFIED | unidentified | unidentified | homo sapiens | Boettcher, J., Han, F. | 2.72 | X-RAY DIFFRACTION | 0.234 | 0.208 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6vn0 | G | J | 0 | E | C | protein | protein | NA | NA | envelope glycoprotein gp41 | envelope glycoprotein gp160 | VIRAL PROTEIN/Immune System | 01/29/20 | BG505 SOSIP.v4.1 in complex with rhesus macaque Fab RM20F | HUMAN IMMUNODEFICIENCY VIRUS 1; MACACA MULATTA | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Cottrell, C.A., Shin, M., Ward, A.B. | 4.25 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV6 | Kappa | null | null | null | null | null |
7q9k | H | L | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN | 11/12/21 | Beta-32 fab in complex with SARS-CoV-2 beta-Spike glycoprotein | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Duyvesteyn, H.M.E., Ren, J., Stuart, D.I. | 4.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7e5s | I | K | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 02/20/21 | SARS-CoV-2 S trimer with four-antibody cocktail complex | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Sun, Y., Wang, L., Wang, N., Feng, R., Wang, X. | 3.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
1hh9 | B | A | 0 | C | peptide | null | pep-2 | IMMUNE SYSTEM/PEPTIDE | 12/21/00 | ANTI-P24 (HIV-1) FAB FRAGMENT CB41 COMPLEXED WITH A PEPTIDE | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | null | Hahn, M., Wessner, H., Schneider-Mergener, J., Hohne, W. | 2.7 | X-RAY DIFFRACTION | 0.333 | 0.282 | false | false | IGHV1 | IGKV14 | Kappa | 0.00001 | null | Other | 4 | 10990450 |
6ot1 | S | T | 0 | P | protein | null | bg505 gp120 | IMMUNE SYSTEM | 05/02/19 | Cryo-EM structure of vaccine-elicited antibody 0PV-b.01 in complex with HIV-1 Env BG505 DS-SOSIP and antibodies VRC03 and PGT122 | HUMAN IMMUNODEFICIENCY VIRUS 1; MACACA MULATTA; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Gorman, J., Kwong, P.D. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV3 | Kappa | null | null | null | null | null |
7vab | N | null | 0 | A | B | protein | protein | NA | NA | mini-gs | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | STRUCTURAL PROTEIN | 08/28/21 | Cryo-EM structure of the non-acylated tirzepatide (LY3298176)-bound human GIPR-Gs complex | HOMO SAPIENS; RATTUS NORVEGICUS; BOS TAURUS; SYNTHETIC CONSTRUCT; SYNTHETIC CONSTRUCT | synthetic construct | null | homo sapiens | rattus norvegicus | Zhao, F.H., Zhou, Q.T., Cong, Z.T., Hang, K.N., Zou, X.Y., Zhang, C., Chen, Y., Dai, A.T., Liang, A.Y., Ming, Q.Q., Wang, M., Chen, L.N., Xu, P.Y., Chang, R.L., Feng, W.B., Xia, T., Zhang, Y., Wu, B.L., Yang, D.H., Zhao, L.H., Xu, H.E., Wang, M.W. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null |
6ikm | E | e | 0 | null | null | null | null | ANTIMICROBIAL PROTEIN | 10/16/18 | Crystal structure of SpuE-Spermidine in complex with ScFv5 | PSEUDOMONAS AERUGINOSA; HOMO SAPIENS | pseudomonas aeruginosa | homo sapiens | null | Wu, D., Sun, X. | 3.398 | X-RAY DIFFRACTION | 0.268 | 0.228 | true | true | unknown | unknown | unknown | null | null | null | null | null |
5m6i | null | A | 0 | null | null | null | null | IMMUNE SYSTEM | 10/25/16 | Crystal structure of non-cardiotoxic Bence-Jones light chain dimer M8 | HOMO SAPIENS | null | homo sapiens | null | Oberti, L., Rognoni, P., Russo, R., Bacarizo, J., Bolognesi, M., Ricagno, S. | 2.2 | X-RAY DIFFRACTION | 0.227 | 0.195 | false | false | null | IGLV2 | Lambda | null | null | null | null | null |
5t1d | H | L | 0 | B | protein | null | envelope glycoprotein l | VIRAL PROTEIN | 08/18/16 | Crystal structure of EBV gHgL/gp42/E1D1 complex | EPSTEIN-BARR VIRUS (STRAIN B95-8); EPSTEIN-BARR VIRUS (STRAIN GD1); MUS MUSCULUS | mus musculus | mus musculus | epstein-barr virus (strain b95-8) | Sathiyamoorthy, K., Jardetzky, T.S. | 3.1 | X-RAY DIFFRACTION | 0.265 | 0.212 | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
5nbm | F | null | 0 | D | A | protein | protein | NA | NA | actin | actin-related protein 4 | HYDROLASE | 03/02/17 | Crystal structure of the Arp4-N-actin(ATP-state) heterodimer bound by a nanobody | SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C); VICUGNA PACOS; TRICHOPLUSIA NI | vicugna pacos | null | saccharomyces cerevisiae (strain atcc 204508 /s288c) | saccharomyces cerevisiae (strain atcc 204508 /s288c) | Knoll, K.R., Eustermann, S., Hopfner, K.P. | 3.4 | X-RAY DIFFRACTION | 0.193 | 0.152 | false | true | IGHV1 | null | null | null | null | null | null | null |
7my2 | D | null | 0 | C | protein | null | spike glycoprotein | IMMUNE SYSTEM/VIRAL PROTEIN | 05/20/21 | CryoEM structure of neutralizing nanobody Nb30 in complex with SARS-CoV2 spike | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS | mus musculus | null | severe acute respiratory syndrome coronavirus2 | Xu, K., Kwong, P.D. | 2.65 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
3fo9 | B | A | 0 | B | Hapten | DIK | 5-{[4-(5-METHYL-3-OXOHEX-4-EN-1-YL)PHENYL]AMINO}-5-OXOPENTANOIC ACID | IMMUNE SYSTEM | 12/29/08 | Crystal structure of aldolase antibody 33F12 Fab' in complex with hapten 1,3-diketone | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Zhu, X., Wilson, I.A. | 1.9 | X-RAY DIFFRACTION | 0.249 | 0.215 | false | true | IGHV6 | IGKV1 | Kappa | null | null | null | null | null |
6waq | A | null | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 03/25/20 | Crystal structure of the SARS-CoV-1 RBD bound by the cross-reactive single-domain antibody SARS VHH-72 | LAMA GLAMA; HUMAN SARS CORONAVIRUS | lama glama | null | human sars coronavirus | Wrapp, D., McLellan, J.S. | 2.2 | X-RAY DIFFRACTION | 0.236 | 0.203 | false | true | IGHV1 | null | null | null | null | null | null | null |
2kqn | null | B | 7 | null | null | null | null | IMMUNE SYSTEM | 11/11/09 | Solution structure of the AL-09 H87Y immunoglobulin light chain variable domain | HOMO SAPIENS | null | homo sapiens | null | Volkman, B.F., Peterson, F.C., Ramirez-Alvarado, M., Baden, E.M. | NOT | SOLUTION NMR | null | null | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
1xiw | D | C | 0 | A | F | protein | protein | NA | NA | t-cell surface glycoprotein cd3 epsilon chain | t-cell surface glycoprotein cd3 delta chain | membrane protein/Immune System | 09/22/04 | Crystal structure of human CD3-e/d dimer in complex with a UCHT1 single-chain antibody fragment | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | homo sapiens | Arnett, K.L., Harrison, S.C., Wiley, D.C. | 1.9 | X-RAY DIFFRACTION | 0.241 | 0.204 | false | true | IGHV1 | IGKV10 | Kappa | null | null | null | null | null |
6eqi | B | null | 0 | C | A | protein | protein | NA | NA | serine/threonine-protein kinase pink1, putative | ubiquitin | TRANSFERASE | 10/13/17 | Structure of PINK1 bound to ubiquitin | HOMO SAPIENS; LAMA GLAMA; PEDICULUS HUMANUS CORPORIS | lama glama | null | pediculus humanus corporis | homo sapiens | Schubert, A.F., Gladkova, C., Pardon, E., Wagstaff, J.L., Freund, S.M.V., Steyaert, J., Maslen, S., Komander, D. | 3.1 | X-RAY DIFFRACTION | 0.234 | 0.203 | false | true | IGHV1 | null | null | null | null | null | null | null |
5j56 | B | null | 0 | A | protein | null | ricin | HYDROLASE/IMMUNE SYSTEM | 04/01/16 | RTA-V1C7 | LAMA GLAMA; RICINUS COMMUNIS | lama glama | null | ricinus communis | Rudolph, M.J. | 1.8 | X-RAY DIFFRACTION | 0.210 | 0.173 | false | true | IGHV1 | null | null | 0 | -11.589049 | SPR | null | TBD |
4nc2 | B | null | 0 | A | protein | null | toxin b | IMMUNE SYSTEM | 10/23/13 | Crystal structure of TcdB-B1 bound to B39 VHH | CLOSTRIDIUM DIFFICILE; LAMA GLAMA | lama glama | null | clostridium difficile | Murase, T., Eugenio, L., Schorr, M., Hussack, G., Tanha, J., Kitova, E.N., Klassen, J.S., Ng, K.K.S. | 2.5 | X-RAY DIFFRACTION | 0.229 | 0.192 | false | true | IGHV1 | null | null | null | null | null | null | null |
7wdf | F | G | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN | 12/21/21 | SARS-CoV-2 Beta spike in complex with two S3H3 Fabs | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS | mus musculus | mus musculus | severe acute respiratory syndrome coronavirus2 | Wang, Y.F., Cong, Y. | 3.9 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6wzt | G | F | 0 | C | protein | null | hemagglutinin | ANTIVIRAL PROTEIN | 05/14/20 | CryoEM structure of influenza hemagglutinin A/Victoria/361/2011 in complex with cyno antibody 3B10 | INFLUENZA A VIRUS; MACACA FASCICULARIS | macaca fascicularis | macaca fascicularis | influenza a virus | Qiu, Y., Zhou, Y., Darricarrere, N. | 4.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
6k5i | C | D | 0 | A | protein | null | h(+)/cl(-) exchange transporter clca | MEMBRANE PROTEIN | 05/29/19 | Crystal structure of the E148D/R147A/F317A mutant CLC-ec1 in the presence of 20 mM NaBr | ESCHERICHIA COLI MS 117-3; MUS MUSCULUS | mus musculus | mus musculus | escherichia coli ms 117-3 | Park, K., Lim, H.H. | 3.022 | X-RAY DIFFRACTION | 0.264 | 0.210 | false | true | IGHV4 | IGKV4 | Kappa | null | null | null | null | null |
5njg | C | D | 0 | B | protein | null | atp-binding cassette sub-family g member 2 | TRANSPORT PROTEIN | 03/28/17 | Structure of an ABC transporter: part of the structure that could be built de novo | MUS MUSCULUS; HOMO SAPIENS | mus musculus | mus musculus | homo sapiens | Taylor, N.M.I., Manolaridis, I., Jackson, S.M., Kowal, J., Stahlberg, H., Locher, K.P. | 3.78 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV13 | Kappa | null | null | null | null | null |
6nf2 | O | P | 0 | I | protein | null | envelope glycoprotein gp41 | IMMUNE SYSTEM | 12/18/18 | Cryo-EM structure of vaccine-elicited antibody 0PV-c.01 in complex with HIV-1 Env BG505 DS-SOSIP and antibodies VRC03 and PGT122 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Gorman, J., Kwong, P.D. | 3.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV2 | Kappa | null | null | null | null | null |
7whz | B | D | 0 | A | protein | null | spike protein s1 | VIRAL PROTEIN | 01/01/22 | SARS-CoV-2 spike protein in complex with three human neutralizing antibodies | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zheng, Q., Li, S., Sun, H., Zheng, Z., Wang, S. | 3.42 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6iw0 | H | L | 0 | A | protein | null | envelope protein e | VIRAL PROTEIN/IMMUNE SYSTEM | 12/04/18 | Crystal structure of 5A ScFv in complex with YFV-17D sE in postfusion state | YELLOW FEVER VIRUS (STRAIN 17D VACCINE); HOMO SAPIENS | homo sapiens | homo sapiens | yellow fever virus (strain 17d vaccine) | Lu, X.S., Xiao, H.X., Li, S.H., Pang, X.F. | 3.6 | X-RAY DIFFRACTION | 0.336 | 0.277 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
7wi0 | B | D | 0 | A | protein | null | spike protein s1 | VIRAL PROTEIN | 01/01/22 | SARS-CoV-2 Omicron variant spike in complex with three human neutralizing antibodies | Homo sapiens | homo sapiens | homo sapiens | homo sapiens | Zheng, Q., Li, S., Sun, H., Zheng, Z., Wang, S. | 3.82 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6s8j | H | L | 0 | A | protein | null | envelope glycoprotein 1 | VIRAL PROTEIN | 07/10/19 | Structure of ZEBOV GP in complex with 5T0180 antibody | HOMO SAPIENS; EBOLA VIRUS | homo sapiens | homo sapiens | ebola virus | Diskin, R., Cohen-Dvashi, H. | 2.91 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
5y0a | F | G | 0 | B | protein | null | protein e | VIRUS/IMMUNE SYSTEM | 07/15/17 | Cryo-EM structure of zika virus complexed with Fab of ZKA190 at pH 8.0 and 37 celsius degree | ZIKA VIRUS (STRAIN MR 766); HOMO SAPIENS | homo sapiens | homo sapiens | zika virus (strain mr 766) | Wang, J.Q., Lok, S.M. | 22 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
6wmw | H | L | 0 | B | protein | null | gdnf family receptor alpha-like | IMMUNE SYSTEM | 04/21/20 | GFRAL receptor bound with two antibody Fabs (3P10, 25M22) | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | White, A., Lakshminarasimhan, D., Olland, A., Suto, R.K. | 2.91 | X-RAY DIFFRACTION | 0.290 | 0.222 | false | true | IGHV9 | IGKV3 | Kappa | null | null | null | null | null |
7lkg | A | B | 0 | C | peptide | null | circumsporozoite protein | IMMUNE SYSTEM/ANTIGEN | 02/02/21 | Crystal structure of PfCSP peptide 21 with vaccine-elicited human anti-malaria antibody m43.151 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | plasmodium falciparum 3d7 | Xu, K., Kwong, P.D. | 2.02 | X-RAY DIFFRACTION | 0.254 | 0.213 | false | true | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
4p49 | A | a | 0 | null | null | null | null | IMMUNE SYSTEM | 03/12/14 | The structure of a chicken anti-prostate specific antigen scFv | GALLUS GALLUS | gallus gallus | null | null | Conroy, P.J., Law, R.H.P., Gilgunn, S., Hearty, S., Llyod, G., Caradoc-Davies, T.T., O'Kennedy, R.J., Whisstock, J.C. | 1.4 | X-RAY DIFFRACTION | 0.214 | 0.183 | true | true | unknown | unknown | unknown | null | null | null | null | null |
2kh2 | B | b | 18 | A | protein | null | interleukin-1 beta | Cytokine/IMMUNE SYSTEM | 03/23/09 | Solution structure of a scFv-IL-1B complex | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | Wilkinson, I.C., Hall, C.J., Veverka, V., Muskett, F.W., Stephens, P.E., Taylor, R.J., Henry, A.J., Carr, M.D. | NOT | SOLUTION NMR | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
6b7z | C | D | 0 | A | protein | null | insulin-degrading enzyme | HYDROLASE/IMMUNE SYSTEM | 10/05/17 | Cryo-EM structure of human insulin degrading enzyme in complex with FAB H11 heavy chain and FAB H11 light chain | HOMO SAPIENS; MUS MUSCULUS | mus musculus, homo sapiens | mus musculus, homo sapiens | homo sapiens | Liang, W.G., Zhang, Z., Bailey, L.J., Kossiakoff, A.A., Tan, Y.Z., Wei, H., Carragher, B., Potter, S.C., Tang, W.J. | 6.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
4f33 | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 05/08/12 | Crystal Structure of therapeutic antibody MORAb-009 | MUS MUSCULUS | null | null | null | Xia, D., Ma, J., Tang, W.K., Esser, L. | 1.749 | X-RAY DIFFRACTION | 0.234 | 0.208 | false | true | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
4xbp | E | F | 0 | null | null | null | null | IMMUNE SYSTEM | 12/17/14 | Crystal structure of human 4E10 Fab crystalized in the presence of Phosphatidylethanolamine (06:0 PE) | HOMO SAPIENS | homo sapiens | homo sapiens | null | Irimia, A., Stanfield, R.L., Wilson, I.A. | 2.94 | X-RAY DIFFRACTION | 0.271 | 0.228 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
3dwt | G | null | 0 | null | null | null | null | IMMUNE SYSTEM | 07/23/08 | Structure of CabBCII-10 nanobody | CAMELUS DROMEDARIUS | camelus dromedarius | null | null | Vincke, C., Loris, R., Muyldermans, S., Conrath, K. | 2.9 | X-RAY DIFFRACTION | 0.305 | 0.245 | false | true | IGHV1 | null | null | null | null | null | null | null |
6mdt | H | L | 0 | G | protein | null | surface protein gp120 | VIRAL PROTEIN | 09/05/18 | Crystal structure of the B41 SOSIP.664 Env trimer with PGT124 and 35O22 Fabs, in P63 space group | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Kumar, S., Sarkar, A., Wilson, I.A. | 3.816 | X-RAY DIFFRACTION | 0.311 | 0.294 | false | true | IGHV4 | unknown | unknown | null | null | null | null | null |
7cqc | H | L | 0 | A | protein | null | putative zinc metalloprotease aq_1964,pa14 from podoplanin,putative zinc metalloprotease aq_1964 | HYDROLASE/IMMUNE SYSTEM | 08/10/20 | The NZ-1 Fab complexed with the PDZ tandem fragment of A. aeolicus S2P homolog with the PA14 tag inserted between the residues 181 and 184 | RATTUS NORVEGICUS; AQUIFEX AEOLICUS VF5; HOMO SAPIENS | rattus norvegicus | rattus norvegicus | aquifex aeolicus vf5, homo sapiens | Aruga, R., Tamura-Sakaguchi, R., Nogi, T. | 2.5 | X-RAY DIFFRACTION | 0.258 | 0.230 | false | true | IGHV5 | IGLV3 | Lambda | null | null | null | null | null |
5da4 | C | null | 0 | null | null | null | null | IMMUNE SYSTEM | 08/19/15 | Structure of a nanobody recognizing the fumarate transporter SLC26Dg | LAMA GLAMA | lama glama | null | null | Dutzler, R., Geertsma, E.R., Chang, Y., Shaik, F.R. | 2.4 | X-RAY DIFFRACTION | 0.242 | 0.233 | false | true | IGHV1 | null | null | null | null | null | null | null |
7vv5 | S | s | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 11/04/21 | Cryo-EM structure of pseudoallergen receptor MRGPRX2 complex with C48/80, state1 | HOMO SAPIENS | homo sapiens | null | homo sapiens | homo sapiens | Yu, L., Fang, Y. | 2.76 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
2fbj | H | L | 0 | H | carbohydrate | NAG | polysaccharide | IMMUNOGLOBULIN | 08/18/89 | REFINED CRYSTAL STRUCTURE OF THE GALACTAN-BINDING IMMUNOGLOBULIN FAB J539 AT 1.95-ANGSTROMS RESOLUTION | MUS MUSCULUS | null | mus musculus | null | Bhat, T.N., Padlan, E.A., Davies, D.R. | 1.95 | X-RAY DIFFRACTION | unknown | unknown | false | true | IGHV4 | IGKV4 | Kappa | null | null | null | null | null |
6a0x | C | D | 0 | null | null | null | null | IMMUNE SYSTEM | 06/06/18 | Crystal structure of broadly neutralizing antibody 13D4 | MUS MUSCULUS | mus musculus | mus musculus | null | Li, S., Li, T. | 2.3 | X-RAY DIFFRACTION | 0.243 | 0.205 | false | false | IGHV1 | IGKV6 | Kappa | null | null | null | null | null |
7jw0 | G | F | 0 | E | protein | null | sars-cov-2 spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 08/24/20 | SARS-CoV-2 spike in complex with the S304 neutralizing antibody Fab fragment | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Walls, A.C., Park, Y.J., Tortorici, M.A., Czudnochowski, N., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G., Veesler, D. | 4.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
2vdl | H | L | 0 | A | protein | null | integrin alpha-iib | CELL ADHESION/IMMUNE SYSTEM | 10/10/07 | Re-refinement of Integrin AlphaIIbBeta3 Headpiece | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Springer, T., Zhu, J., Xiao, T. | 2.75 | X-RAY DIFFRACTION | 0.191 | 0.144 | false | false | IGHV14 | IGKV14 | Kappa | null | null | null | null | null |
1ae6 | H | L | 0 | null | null | null | null | IMMUNOGLOBULIN | 03/06/97 | IGG-FAB FRAGMENT OF MOUSE MONOCLONAL ANTIBODY CTM01 | MUS MUSCULUS | mus musculus | mus musculus | null | Banfield, M.J., Brady, R.L. | 3.0 | X-RAY DIFFRACTION | 0.311 | 0.210 | false | false | IGHV1 | IGKV2 | Kappa | null | null | null | null | null |
7jwp | O | P | 0 | X | peptide | null | il-18 peptide | IMMUNE SYSTEM | 08/26/20 | Fab CJ11 in complex IL-18 peptide liberated by Caspase cleavage | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | homo sapiens | Payandeh, J., Ho, H. | 3.0 | X-RAY DIFFRACTION | 0.260 | 0.235 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6nfc | K | N | 0 | B | F | protein | protein | NA | NA | hiv-1 env bg505 md64 n332-gt5 sosip gp41 | hiv-1 env bg505 md64 n332-gt5 sosip gp120 | VIRAL PROTEIN | 12/19/18 | BG505 MD64 N332-GT5 SOSIP trimer in complex with BG18-like precursor HMP42 fragmentantigen binding and base-binding RM20A3 fragment antigen binding | MACACA MULATTA; HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Ozorowski, G., Torres, J.L., Ward, A.B. | 3.43 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
3qxw | B | null | 0 | null | null | null | null | IMMUNE SYSTEM | 03/02/11 | Free structure of an anti-methotrexate CDR1-4 Graft VHH Antibody | LAMA GLAMA | lama glama | null | null | Fanning, S.W., Horn, J.R. | 1.85 | X-RAY DIFFRACTION | 0.238 | 0.189 | false | true | IGHV1 | null | null | null | null | null | null | null |
4ub0 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 08/11/14 | New design for monovalent bispecific IgG through cysteine engineering of the CH1-CL interface | HOMO SAPIENS | homo sapiens | homo sapiens | null | Oganesyan, V.Y., Dall'Acqua, W.F. | 2.2 | X-RAY DIFFRACTION | 0.252 | 0.232 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6pe9 | K | M | 0 | J | protein | null | tumor necrosis factor receptor superfamily member 5 | IMMUNE SYSTEM | 06/20/19 | Crystal Structure of CD40 complexed to FAB516 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Argiriadi, M.A. | 3.13 | X-RAY DIFFRACTION | 0.255 | 0.216 | false | true | IGHV3 | IGKV4 | Kappa | null | null | null | null | null |
6cue | h | l | 0 | d | protein | null | unknown | VIRAL PROTEIN | 03/26/18 | Cryo-EM structure at 4.0 A resolution of vaccine-elicited antibody vFP7.04 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | HUMAN IMMUNODEFICIENCY VIRUS 1; MUS MUSCULUS; HOMO SAPIENS | mus musculus | mus musculus | human immunodeficiency virus 1 | Acharya, P., Carragher, B., Potter, C.S., Kwong, P.D. | 4.0 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6ccb | D | E | 0 | C | protein | null | glycoprotein 120 | VIRAL PROTEIN | 02/06/18 | Crystal structure of 253-11 SOSIP trimer in complex with 10-1074 Fab | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Moyo, T., Ereno-Orbea, J., Dorfman, J., Julien, J.P. | 6.5 | X-RAY DIFFRACTION | 0.366 | 0.298 | false | true | IGHV4 | unknown | unknown | null | null | null | null | null |
6x7w | H | L | 0 | G | peptide | null | hiv fusion peptide 512-519 | IMMUNE SYSTEM/VIRAL PROTEIN | 05/30/20 | Vaccine-elicited mouse FP-targeting neutralizing antibody vFP49.02 in complex with HIV fusion peptide (residue 512-519) | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | human immunodeficiency virus 1 | Xu, K., Kwong, P.D. | 1.7 | X-RAY DIFFRACTION | 0.248 | 0.214 | false | true | IGHV5 | IGKV5 | Kappa | null | null | null | null | null |
6b0n | D | E | 0 | G | protein | null | envelope glycoprotein gp140 | Viral protein/immune system | 09/14/17 | Crystal structure of the cleavage-independent prefusion HIV Env glycoprotein trimer of the clade A BG505 isolate (NFL construct) in complex with Fabs PGT122 and PGV19 at 3.39 A | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Sarkar, A., Irimia, A., Wilson, I.A. | 3.4 | X-RAY DIFFRACTION | 0.346 | 0.335 | false | true | unknown | IGLV2 | Lambda | null | null | null | null | null |
6wzk | C | D | 0 | F | protein | null | c-x-c motif chemokine 3 | IMMUNE SYSTEM | 05/14/20 | LY3041658 Fab bound to CXCL3 | HOMO SAPIENS; MACACA FASCICULARIS | homo sapiens | homo sapiens | macaca fascicularis | Durbin, J.D., Druzina, Z. | 1.8 | X-RAY DIFFRACTION | 0.209 | 0.178 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6wtu | K | L | 0 | J | protein | null | reticulocyte binding protein 2b | CELL INVASION | 05/04/20 | Plasmodium vivax reticulocyte binding protein 2b (PvRBP2b) bound to human monoclonal antibody 273264 | PLASMODIUM VIVAX (STRAIN SALVADOR I); HOMO SAPIENS | homo sapiens | homo sapiens | plasmodium vivax (strain salvador i) | Chan, L.J., Dietrich, M.H., Tham, W.H. | 2.55 | X-RAY DIFFRACTION | 0.255 | 0.208 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
5aaw | H | h | 0 | I | protein | null | dengue serotype 4 envelope protein domain 3 | null | 07/30/15 | Structure of a redesigned cross-reactive antibody to dengue virus with increased in vivo potency | DENGUE VIRUS; MUS MUSCULUS | mus musculus | null | dengue virus | Wong, Y., Robinson, L., Lescar, J., Sasisekharan, R. | 3.27 | X-RAY DIFFRACTION | 0.26258 | 0.22661 | true | true | unknown | unknown | unknown | 0 | -11.411242 | SPR | null | TBD |
7rth | H | G | 0 | null | null | null | null | IMMUNE SYSTEM | 08/13/21 | Crystal structure of an anti-lysozyme nanobody in complex with an anti-nanobody Fab ""NabFab"" | HOMO SAPIENS | homo sapiens | homo sapiens | null | Filippova, E.V., Mukherjee, S., Bloch, J.S., Locher, K.P., Kossiakoff, A.A. | 3.19 | X-RAY DIFFRACTION | 0.267 | 0.216 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
4r4n | W | X | 0 | V | i | protein | peptide | NA | NA | m48u1 peptide | unknown | VIRAL PROTEIN/IMMUNE SYSTEM/INHIBITOR | 08/19/14 | Crystal structure of the anti-hiv-1 antibody 2.2c in complex with hiv-1 93ug037 gp120 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human immunodeficiency virus 1 | synthetic construct | Acharya, P., Louder, R., Kwong, P.D. | 3.56 | X-RAY DIFFRACTION | 0.328 | 0.296 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
2kqn | null | A | 5 | null | null | null | null | IMMUNE SYSTEM | 11/11/09 | Solution structure of the AL-09 H87Y immunoglobulin light chain variable domain | HOMO SAPIENS | null | homo sapiens | null | Volkman, B.F., Peterson, F.C., Ramirez-Alvarado, M., Baden, E.M. | NOT | SOLUTION NMR | null | null | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
6c5h | H | L | 0 | H | carbohydrate | GP1 | polysaccharide | IMMUNE SYSTEM, SUGAR BINDING PROTEIN | 01/16/18 | S25-5 Fab in complex with Chlamydiaceae-specific LPS antigen | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Evans, S.V., Haji-Ghassemi, O. | 1.99 | X-RAY DIFFRACTION | 0.226 | 0.187 | false | false | IGHV2 | IGKV1 | Kappa | null | null | null | null | null |
5any | I | M | 0 | B | A | protein | protein | NA | NA | e2 | e1 | VIRUS | 09/08/15 | Electron cryo-microscopy of chikungunya virus in complex with neutralizing antibody Fab CHK265 | CHIKUNGUNYA VIRUS; MUS MUSCULUS | mus musculus | mus musculus | chikungunya virus | chikungunya virus | Fox, J.M., Long, F., Edeling, M.A., Lin, H., Duijl-Richter, M., Fong, R.H., Kahle, K.M., Smit, J.M., Jin, J., Simmons, G., Doranz, B.J., Crowe, J.E., Fremont, D.H., Rossmann, M.G., Diamond, M.S. | 16.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV9 | IGLV1 | Lambda | null | null | null | null | null |
7z1b | F | null | 0 | A | protein | null | spike protein s1 | ANTIVIRAL PROTEIN | 02/24/22 | Nanobody H11-A10 and F2 bound to RBD | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; LAMA GLAMA | lama glama | null | severe acute respiratory syndrome coronavirus2 | Mikolajek, H., Naismith, J.H. | 2.3 | X-RAY DIFFRACTION | 0.243 | 0.198 | false | true | IGHV1 | null | null | null | null | null | null | null |
5vl2 | H | null | 0 | H | Hapten | 9EG | N-(4-chlorophenyl)-N'-(3,4-dichlorophenyl)urea | UNKNOWN FUNCTION | 04/24/17 | The hapten triclocarban bound to the single domain camelid nanobody VHH T4 | LAMA GLAMA | lama glama | null | lama glama | Tabares-da Rosa, S., Gonzalez-Sapienza, G., Wilson, D.K. | 1.9 | X-RAY DIFFRACTION | 0.263 | 0.219 | false | true | IGHV1 | null | null | null | null | null | null | null |
2p46 | B | null | 0 | A | protein | null | ribonuclease pancreatic | HYDROLASE/IMMUNE SYSTEM | 03/11/07 | Complex of a camelid single-domain vhh antibody fragment with RNASE A at 2.5A resolution: se5b-ortho-2 crystal form with five se-met sites (L4M, M34, M51, F68M, M83) in vhh scaffold. | CAMELUS DROMEDARIUS; BOS TAURUS | camelus dromedarius | null | bos taurus | Tereshko, V., Uysal, S., Koide, A., Margalef, K., Koide, S., Kossiakoff, A.A. | 2.5 | X-RAY DIFFRACTION | 0.299 | 0.221 | false | true | IGHV1 | null | null | 0 | -9.61 | Other | 30 | 18445622 |
7ki6 | H | L | 0 | A | protein | null | fusion glycoprotein f0 | VIRAL PROTEIN/IMMUNE SYSTEM | 10/23/20 | Structure of the HeV F glycoprotein in complex with the 1F5 neutralizing antibody | HENDRA HENIPAVIRUS; MUS MUSCULUS | mus musculus | mus musculus | hendra henipavirus | Dang, H.V., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Veesler, D. | 2.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV4 | Kappa | null | null | null | null | null |
4ubd | G | H | 0 | F | A | protein | protein | NA | NA | hemagglutinin ha2 chain | hemagglutinin ha1 chain | viral protein/immune system | 08/12/14 | Crystal structure of a neutralizing human monoclonal antibody with 1968 H3 HA | INFLUENZA A VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus | influenza a virus | Shore, D.A., Yang, H., Cho, M., Donis, R.O., Stevens, J. | 3.5 | X-RAY DIFFRACTION | 0.258 | 0.212 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6vbo | H | L | 0 | C | peptide | null | envelope glycoprotein gp160 | IMMUNE SYSTEM/VIRAL PROTEIN | 12/19/19 | Crystal structure of anti-HIV-1 antibody DH813 bound to gp120 V2 peptide | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Janus, B.M., Ofek, G. | 1.683 | X-RAY DIFFRACTION | 0.208 | 0.175 | false | true | IGHV5 | IGKV2 | Kappa | null | null | null | null | null |
1gig | H | L | 0 | null | null | null | null | IMMUNOGLOBULIN | 01/20/93 | REFINED THREE-DIMENSIONAL STRUCTURE OF THE FAB FRAGMENT OF A MURINE IGG1, LAMBDA ANTIBODY | MUS MUSCULUS | mus musculus | mus musculus | null | Bizebard, T., Knossow, M. | 2.3 | X-RAY DIFFRACTION | unknown | unknown | false | true | IGHV2 | IGLV1 | Lambda | null | null | null | null | null |
2ltq | C | B | 1 | A | protein | null | disulfide bond formation protein b | MEMBRANE PROTEIN, OXIDOREDUCTASE | 05/30/12 | High resolution structure of DsbB C41S by joint calculation with solid-state NMR and X-ray data | ESCHERICHIA COLI; MUS MUSCULUS | mus musculus | mus musculus | escherichia coli | Tang, M., Sperling, L.J., Schwieters, C.D., Nesbitt, A.E., Gennis, R.B., Rienstra, C.M. | NOT | SOLID-STATE NMR | null | null | false | false | IGHV5 | IGKV8 | Kappa | null | null | null | null | null |
6ad8 | C | D | 0 | A | protein | null | h(+)/cl(-) exchange transporter clca | TRANSPORT PROTEIN | 07/31/18 | Crystal structure of the E148D mutant CLC-ec1 in 50 mM bromide | ESCHERICHIA COLI (STRAIN K12); MUS MUSCULUS | mus musculus | mus musculus | escherichia coli (strain k12) | Lim, H.-H., Park, K. | 3.3 | X-RAY DIFFRACTION | 0.284 | 0.227 | false | false | IGHV4 | IGKV4 | Kappa | null | null | null | null | null |
6xv8 | D | null | 0 | null | null | null | null | STRUCTURAL PROTEIN | 01/21/20 | Crystal structure of Megabody Mb-Nb207-c7HopQ_G10 | LAMA GLAMA; HELICOBACTER PYLORI (STRAIN G27) | lama glama, helicobacter pylori (strain g27) | null | null | Steyaert, J., Uchanski, T., Fischer, B. | 3.15 | X-RAY DIFFRACTION | 0.297 | 0.255 | false | true | IGHV1 | null | null | null | null | null | null | null |
7wd9 | E | F | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN | 12/21/21 | SARS-CoV-2 Beta spike in complex with three S3H3 Fabs | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS | mus musculus | mus musculus | severe acute respiratory syndrome coronavirus2 | Wang, Y.F., Cong, Y. | 3.7 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
3dsf | H | L | 0 | P | peptide | null | a peptide from osteopontin | IMMUNE SYSTEM | 07/12/08 | Crystal structure of anti-osteopontin antibody 23C3 in complex with W43A mutated epitope peptide | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | null | Du, J., Zhong, C., Yang, H., Ding, J. | 2.8 | X-RAY DIFFRACTION | 0.297 | 0.241 | false | false | IGHV10 | IGKV12 | Kappa | null | null | null | null | null |
7zf9 | H | L | 0 | E | protein | null | spike protein s1 | VIRAL PROTEIN | 04/01/22 | SARS-CoV-2 Omicron BA.2 RBD in complex with COVOX-150 Fab (P21) | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, D., Huo, J., Ren, J., Stuart, D.I. | 3.25 | X-RAY DIFFRACTION | 0.265 | 0.222 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
Subsets and Splits
No community queries yet
The top public SQL queries from the community will appear here once available.