pdb
stringlengths
4
4
Hchain
stringclasses
59 values
Lchain
stringclasses
60 values
model
int64
0
76
antigen_chain
stringclasses
386 values
antigen_type
stringclasses
24 values
antigen_het_name
stringclasses
240 values
antigen_name
stringlengths
1
396
short_header
stringclasses
448 values
date
stringlengths
8
8
compound
stringlengths
4
243
organism
stringlengths
3
175
heavy_species
stringclasses
121 values
light_species
stringclasses
67 values
antigen_species
stringclasses
937 values
authors
stringlengths
6
762
resolution
stringlengths
1
8
method
stringclasses
10 values
r_free
stringclasses
354 values
r_factor
stringclasses
342 values
scfv
bool
2 classes
engineered
bool
2 classes
heavy_subclass
stringclasses
14 values
light_subclass
stringclasses
35 values
light_ctype
stringclasses
3 values
affinity
float64
0
0
delta_g
float64
-16.91
-5.04
affinity_method
stringclasses
11 values
temperature
float64
4
37
pmid
stringclasses
157 values
7cx2
N
null
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
09/01/20
Cryo-EM structure of the PGE2-bound EP2-Gs complex
HOMO SAPIENS; SYNTHETIC CONSTRUCT
synthetic construct
null
homo sapiens | homo sapiens
Qu, C., Mao, C., Xiao, P., Shen, Q., Zhong, Y., Yang, F., Shen, D., Tao, X., Zhang, H., Yan, X., Zhao, R., He, J., Guan, Y., Zhang, C., Hou, G., Zhang, P., Yu, X., Guan, Y., Sun, J., Zhang, Y.
2.8
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
4qhu
H
L
0
C
protein
null
interleukin-17a
IMMUNE SYSTEM
05/29/14
Crystal Structure of IL-17A/Fab6785 complex
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Luo, J., Gilliland, G.L., Malia, T., Obmolova, G., Teplyakov, A.
2.2
X-RAY DIFFRACTION
0.216
0.171
false
true
IGHV3
IGLV3
Lambda
null
null
null
null
null
7rlv
C
D
0
R
peptide
null
peptide from circumsporozoite protein variant vk210
ANTIMICROBIAL PROTEIN
07/26/21
Antibody 2F2 in complex with P. vivax CSP peptide GDRADGQPAGDRADGQPA
MUS MUSCULUS; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
plasmodium vivax
Kucharska, I., Julien, J.P.
2.2
X-RAY DIFFRACTION
0.220
0.179
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
4r96
B
A
0
null
null
null
null
Immune System
09/03/14
Structure of a Llama Glama Fab 48A2 against human cMet
LLAMA GLAMA
lama glama
lama glama
null
Klarenbeek, A., El Mazouari, K., Desmyter, A., Blanchetot, C., Hultberg, A., Roovers, R.C., Cambillau, C., Spinelli, S., Del-Favero, J., Verrips, T., de Haard, H., Achour, I.
3.31
X-RAY DIFFRACTION
0.261
0.217
false
true
IGHV1
IGKV4
Kappa
null
null
null
null
null
7msq
D
E
0
B
protein
null
spike protein s1
VIRAL PROTEIN/ANTIVIRAL PROTEIN
05/12/21
Complex between the Fab arm of AB-3467 and the SARS-CoV-2 receptor binding domain (RBD)
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Langley, D.B., Christ, D.
2.29
X-RAY DIFFRACTION
0.245
0.194
false
true
IGHV4
IGKV1
Kappa
null
null
null
null
null
3bgf
H
L
0
S
protein
null
spike protein s1
Viral Protein/Immune System
11/26/07
X-ray crystal structure of the SARS coronavirus spike receptor binding domain in complex with F26G19 Fab
SARS CORONAVIRUS; MUS MUSCULUS
mus musculus
mus musculus
sars coronavirus
Pak, J.E., Rini, J.M.
3.0
X-RAY DIFFRACTION
0.286
0.234
false
false
IGHV1
IGKV9
Kappa
0
-10.34
SPR
25
19324051
3ifl
H
L
0
P
peptide
null
amyloid beta a4 protein
IMMUNE SYSTEM
07/24/09
X-ray structure of amyloid beta peptide:antibody (Abeta1-7:12A11) complex
MUS MUSCULUS; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
homo sapiens
Weis, W.I., Feinberg, H., Basi, G.S., Schenk, D.
1.5
X-RAY DIFFRACTION
0.206
0.178
false
true
IGHV8
IGKV1
Kappa
0
-11.01
SPR
25
19923222
6x58
C
D
0
F
protein
null
gp41 mper peptide,putative fluoride ion transporter crcb
MEMBRANE PROTEIN
05/25/20
MPER-Fluc-Ec2 bound to 10E8v4 antibody
HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS; ESCHERICHIA COLI
homo sapiens
homo sapiens
human immunodeficiency virus, escherichia coli
McIlwain, B.C., Stockbridge, R.B.
3.26
X-RAY DIFFRACTION
0.295
0.251
false
true
IGHV3
IGLV3
Lambda
null
null
null
null
null
6nb5
I
M
0
null
null
null
null
IMMUNE SYSTEM
12/06/18
Crystal structure of anti- MERS-CoV human neutralizing LCA60 antibody Fab fragment
HOMO SAPIENS
homo sapiens
homo sapiens
null
Walls, A.J., Xiong, X., Park, Y.J., Tortorici, M.A., Snijder, J., Quispe, J., Cameroni, E., Gopal, R., Dai, M., Lanzavecchia, A., Zambon, M., Rey, F.A., Corti, D., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID)
3.0
X-RAY DIFFRACTION
0.283
0.228
false
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
6nfn
D
C
0
C
Hapten
BCG
3-(BENZOYLOXY)-8-METHYL-8-AZABICYCLO[3.2.1]OCTANE-2-CARBOXYLIC ACID
IMMUNE SYSTEM
12/20/18
Fab fragement of anti-cocaine antibody h2E2 bound to benzoylecgonine
MUS MUSCULUS
mus musculus
mus musculus
mus musculus
Pokkuluri, P.R., Tan, K.
2.63
X-RAY DIFFRACTION
0.244
0.185
false
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
3d9a
H
L
0
C
protein
null
lysozyme c
HYDROLASE/IMMUNE SYSTEM
05/27/08
High Resolution Crystal Structure Structure of HyHel10 Fab Complexed to Hen Egg Lysozyme
MUS MUSCULUS; GALLUS GALLUS
mus musculus
mus musculus
gallus gallus
DeSantis, M.E., Li, M., Shanmuganathan, A., Acchione, M., Walter, R., Wlodawer, A., Smith-Gill, S.
1.2
X-RAY DIFFRACTION
0.205
0.190
false
true
IGHV3
IGKV5
Kappa
null
null
null
null
null
5nhw
H
L
0
null
null
null
null
IMMUNE SYSTEM
03/22/17
CRYSTAL STRUCTURE OF THE BIMAGRUMAB Fab
HOMO SAPIENS
homo sapiens
homo sapiens
null
Rondeau, J.-M.
1.78
X-RAY DIFFRACTION
0.204
0.178
false
true
IGHV1
IGLV2
Lambda
null
null
null
null
null
7d8b
B
null
0
A
protein
null
eukaryotic translation initiation factor 4e
RNA BINDING PROTEIN
10/07/20
Engineering Disulphide-Free Autonomous Antibody VH Domains to modulate intracellular pathways
HOMO SAPIENS
homo sapiens
null
homo sapiens
Frosi, Y., Lin, Y.C., Jiang, S., Brown, C.J.
2.46
X-RAY DIFFRACTION
0.292
0.250
false
true
IGHV3
null
null
null
null
null
null
null
3cm9
A
L
9
null
null
null
null
IMMUNE SYSTEM
03/21/08
Solution Structure of Human SIgA2
HOMO SAPIENS
homo sapiens
homo sapiens
null
Bonner, A., Almogren, A., Furtado, P.B., Kerr, M.A., Perkins, S.J.
NOT
SOLUTION SCATTERING
null
null
false
false
IGHV1
IGKV1
Kappa
null
null
null
null
null
7k9z
H
L
0
E
protein
null
spike glycoprotein
IMMUNE SYSTEM
09/29/20
Crystal structure of SARS-CoV-2 receptor binding domain in complex with the Fab fragments of neutralizing antibodies 298 and 52
HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Newton, J.C., Kucharska, I., Rujas, E., Cui, H., Julien, J.P.
2.95
X-RAY DIFFRACTION
0.287
0.261
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
2qtj
C
O
4
null
null
null
null
IMMUNE SYSTEM
08/02/07
Solution structure of human dimeric immunoglobulin A
HOMO SAPIENS
homo sapiens
homo sapiens
null
Bonner, A., Furtado, P.B., Almogren, A., Kerr, M.A., Perkins, S.J.
NOT
SOLUTION SCATTERING
null
null
false
false
IGHV1
IGKV1
Kappa
null
null
null
null
null
4k3h
null
B
0
A
Hapten
1OM
4-{bis[4-(dimethylamino)phenyl]methyl}phenol
immune system/inhibitor
04/10/13
Immunoglobulin lambda variable domain L5(L89S) fluorogen activationg protein in complex with malachite green
HOMO SAPIENS
null
homo sapiens
homo sapiens
Stanfield, R.L., Szent-Gyorgyi, C., Wilson, I.A.
2.45
X-RAY DIFFRACTION
0.225
0.194
false
true
null
IGLV7
Lambda
0
-9.350354
Unknown
null
TBD
7k63
N
n
0
G | F | H
protein | protein | protein
NA | NA | NA
histone h2a type 1-b/e | histone h4 | histone h2b type 1-j
NUCLEAR PROTEIN/DNA
09/18/20
Cryo-EM structure of a chromatosome containing chimeric linker histone gH1.10-ncH1.4
HOMO SAPIENS; MUS MUSCULUS
mus musculus
null
homo sapiens | homo sapiens | homo sapiens
Zhou, B.-R., Bai, Y.
3.03
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
5o0w
G
null
0
C
protein
null
fructose-bisphosphate aldolase
LYASE
05/17/17
Crystal structure of the complex between Nb474 and Trypanosoma congolense fructose-1,6-bisphosphate aldolase
TRYPANOSOMA CONGOLENSE (STRAIN IL3000); VICUGNA PACOS
vicugna pacos
null
trypanosoma congolense (strain il3000)
Pinto, J., Magez, S., Sterckx, Y.
2.57
X-RAY DIFFRACTION
0.222
0.192
false
true
IGHV1
null
null
0
-13.822203
SPR
null
TBD
2ojz
I
M
0
null
null
null
null
IMMUNE SYSTEM
01/15/07
Anti-DNA antibody ED10
MUS MUSCULUS
mus musculus
mus musculus
null
Stanfield, R.L., Sanguineti, S., Wilson, I.A., de Prat-Gay, G.
2.73
X-RAY DIFFRACTION
0.264
0.201
false
false
IGHV1
IGKV1
Kappa
null
null
null
null
null
7e3l
F
G
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN
02/09/21
Ultrapotent SARS-CoV-2 neutralizing antibodies with protective efficacy against newly emerged mutational variants
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Guo, H., Li, T., Liu, F., Gao, Y., Ji, X., Yang, H.
3.6
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
1i9j
H
L
0
H
Hapten
TES
TESTOSTERONE
IMMUNE SYSTEM
03/20/01
TESTOSTERONE COMPLEX STRUCTURE OF THE RECOMBINANT MONOCLONAL WILD TYPE ANTI-TESTOSTERONE FAB FRAGMENT
MUS MUSCULUS
mus musculus
mus musculus
mus musculus
Valjakka, J., Takkinenz, K., Teerinen, T., Soderlund, H., Rouvinen, J.
2.6
X-RAY DIFFRACTION
0.255
0.188
false
true
IGHV5
IGKV1
Kappa
null
null
null
null
null
7p77
D
null
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN
07/19/21
SARS-CoV-2 spike protein in complex with sybody#15 and sybody#68 in a 3up conformation
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; SYNTHETIC CONSTRUCT
synthetic construct
null
severe acute respiratory syndrome coronavirus2
Walter, J.D., Hutter, C.A.J., Garaeva, A.A., Scherer, M., Zimmermann, I., Wyss, M., Rheinberger, J., Ruedin, Y., Earp, J.C., Egloff, P., Sorgenfrei, M., Huerlimann, L.M., Gonda, I., Meier, G., Remm, S., Thavarasah, S., Zimmer, G., Slotboom, D.J., Paulino, C., Plattet, P., Seeger, M.A.
2.98
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
5vig
H
L
0
Z
protein
null
zika virus envelope protein diii
IMMUNE SYSTEM
04/16/17
Crystal structure of anti-Zika antibody Z006 bound to Zika virus envelope protein DIII
ZIKA VIRUS; HOMO SAPIENS
homo sapiens
homo sapiens
zika virus
Keeffe, J.R., West Jr., A.P., Gristick, H.B., Bjorkman, P.J.
3.0
X-RAY DIFFRACTION
0.257
0.212
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
6sne
B
A
0
O
peptide
null
envelope glycoprotein gp160
IMMUNE SYSTEM
08/23/19
crystal structure of LN01 Fab in complex with an HIV-1 gp41 peptide
HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS
homo sapiens
homo sapiens
human immunodeficiency virus 1
Caillat, C., Pinto, D., Corti, D., Fenwick, C., Pantaleo, G., Weissenhorn, W.
3.9
X-RAY DIFFRACTION
0.261
0.218
false
true
IGHV4
IGKV1
Kappa
null
null
null
null
null
4ckd
J
N
0
A
protein
null
beta-galactosidase
HYDROLASE/IMMUNE SYSTEM
01/03/14
Model of complex between the E.coli enzyme beta-galactosidase and four single chain Fv antibody domains scFv13R4.
MUS MUSCULUS; ESCHERICHIA COLI
mus musculus
mus musculus
escherichia coli
Vinothkumar, K.R., McMullan, G., Henderson, R.
13.0
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV5
Kappa
null
null
null
null
null
6yhq
H
L
0
null
null
null
null
IMMUNE SYSTEM
03/30/20
Crystal Structure of Fab F5.18.6, anti-Plasmodium vivax AMA1
MUS MUSCULUS
mus musculus
mus musculus
null
Bentley, G.A., Saul, F.A., Vulliez-le Normand, B.
1.89
X-RAY DIFFRACTION
0.239
0.185
false
false
IGHV5
IGKV4
Kappa
null
null
null
null
null
7kxj
H
L
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN/Immune System
12/04/20
SARS-CoV-2 spike protein in complex with Fab 15033-7, 3-""up"", asymmetric
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Li, Z., Rini, J.
6.4
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
6oed
A
B
0
null
null
null
null
IMMUNE SYSTEM
03/27/19
CRYSTAL STRUCTURE OF THE RV144 C1-C2 SPECIFIC ANTIBODY CH55 FAB
HOMO SAPIENS
homo sapiens
homo sapiens
null
Yan, F., Van, V., Tolbert, W.D., Pazgier, M.
2.461
X-RAY DIFFRACTION
0.312
0.256
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
4g6k
H
L
0
null
null
null
null
IMMUNE SYSTEM
07/19/12
Crystal structure of the therapeutic antibody binding fragment of gevokizumab in its unbound state
null
homo sapiens
homo sapiens
null
Blech, M., Hoerer, S.
1.9
X-RAY DIFFRACTION
0.211
0.183
false
true
IGHV4
IGKV1
Kappa
null
null
null
null
null
6vos
H
L
0
null
null
null
null
IMMUNE SYSTEM
01/31/20
Crystal structure of macaque anti-HIV-1 antibody RM20J
MACACA MULATTA
macaca mulatta
macaca mulatta
null
Yuan, M., Wilson, I.A.
2.299
X-RAY DIFFRACTION
0.211
0.181
false
true
IGHV4
IGKV1
Kappa
null
null
null
null
null
2qtj
A
L
2
null
null
null
null
IMMUNE SYSTEM
08/02/07
Solution structure of human dimeric immunoglobulin A
HOMO SAPIENS
homo sapiens
homo sapiens
null
Bonner, A., Furtado, P.B., Almogren, A., Kerr, M.A., Perkins, S.J.
NOT
SOLUTION SCATTERING
null
null
false
false
IGHV1
IGKV1
Kappa
null
null
null
null
null
2zpk
H
L
0
P
peptide
null
proteinase-activated receptor 4
IMMUNE SYSTEM
07/16/08
Crystal structure of P20.1 Fab fragment in complex with its antigen peptide
MUS MUSCULUS; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
null
Nogi, T., Sanagawa, T., Takagi, J.
1.8
X-RAY DIFFRACTION
0.204
0.172
false
false
IGHV9
IGLV1
Lambda
0.000001
-7.95
SPR
25
18787202
5y9f
Z
Y
0
H
protein
null
major capsid protein l1
VIRAL PROTEIN/IMMUNE SYSTEM
08/24/17
Crystal structure of HPV59 pentamer in complex with the Fab fragment of antibody 28F10
HUMAN PAPILLOMAVIRUS TYPE 59; MUS MUSCULUS
mus musculus
mus musculus
human papillomavirus type 59
Li, S.W., Li, Z.H.
3.35
X-RAY DIFFRACTION
0.261
0.230
false
false
IGHV5
IGKV1
Kappa
null
null
null
null
null
7chc
H
L
0
R
protein
null
spike glycoprotein
PROTEIN BINDING/IMMUNE SYSTEM
07/05/20
Crystal structure of the SARS-CoV-2 S RBD in complex with BD-629 Fab and BD-368-2 Fab
HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Du, S., Xiao, J.Y.
2.71
X-RAY DIFFRACTION
0.286
0.212
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
6rbb
K
null
0
null
null
null
null
IMMUNE SYSTEM
05/13/20
CRYSTAL STRUCTURE OF the VhH-domain of anti-IL-17A antibody netakimab
LAMA GLAMA
lama glama
null
null
Kostareva, O.S., Kolyadenko, I.A., Ulitin, A.B., Ekimova, V.M., Evdokimov, S.R., Garber, M.B., Tishchenko, T.V., Gabdulkhakov, A.G.
2.45
X-RAY DIFFRACTION
0.280
0.216
false
true
IGHV1
null
null
null
null
null
null
null
7e7x
H
L
0
A
protein
null
spike protein s1
VIRAL PROTEIN
02/28/21
SARS-CoV-2 Spike Protein N terminal domain in Complex with N11 Fab
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhang, Z., Shuo, D., Xiao, J.
2.78
X-RAY DIFFRACTION
0.279
0.248
false
true
IGHV1
IGLV2
Lambda
null
null
null
null
null
3ulv
H
L
0
A
protein
null
toll-like receptor 3
IMMUNE SYSTEM
11/11/11
Structure of quaternary complex of human TLR3ecd with three Fabs (Form2)
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Luo, J., Gilliland, G.L., Obmolova, O., Malia, T., Teplyakov, A.
3.522
X-RAY DIFFRACTION
0.253
0.231
false
true
IGHV5
IGKV1
Kappa
null
null
null
null
null
6chb
I
L
0
F
protein
null
envelope glycoprotein gp120
IMMUNE SYSTEM
02/22/18
Crystal structure of a natively-glycosylated BG505 SOSIP.664 HIV-1 Envelope Trimer in complex with the broadly-neutralizing antibodies BG18 and IOMA
HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS
homo sapiens
homo sapiens
human immunodeficiency virus 1
Barnes, C.O., Bjorkman, P.J.
6.801
X-RAY DIFFRACTION
0.417
0.318
false
true
unknown
IGLV3
Lambda
null
null
null
null
null
3fo1
H
L
0
H
Hapten
BZH
5-[(2-AMINO-1H-BENZIMIDAZOL-6-YL)AMINO]-5-OXOPENTANOIC ACID
IMMUNE SYSTEM
12/27/08
Crystal structure of hapten complex of catalytic elimination antibody 13G5 (Glu(L39)Ala mutant)
MUS MUSCULUS, HOMO SAPIENS
mus musculus, homo sapiens
mus musculus, homo sapiens
mus musculus, homo sapiens
Debler, E.W., Wilson, I.A.
2.2
X-RAY DIFFRACTION
0.281
0.225
false
true
IGHV2
IGKV1
Kappa
null
null
null
null
null
7k90
H
L
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
09/27/20
Structure of the SARS-CoV-2 S 6P trimer in complex with the human neutralizing antibody Fab fragment, C144
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Barnes, C.O., Esswein, S.R., Bjorkman, P.J.
3.24
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV2
Lambda
null
null
null
null
null
4nco
H
G
0
E
protein
null
bg505 sosip gp120
VIRAL PROTEIN/IMMUNE SYSTEM
10/24/13
Crystal Structure of the BG505 SOSIP gp140 HIV-1 Env trimer in Complex with the Broadly Neutralizing Fab PGT122
HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS
homo sapiens
homo sapiens
human immunodeficiency virus 1
Julien, J.-P., Stanfield, R.L., Lyumkis, D., Ward, A.B., Wilson, I.A.
4.7
X-RAY DIFFRACTION
0.389
0.375
false
true
IGHV4
IGLV3
Lambda
null
null
null
null
null
5vn3
M
O
0
J
protein
null
envelope glycoprotein gp160
IMMUNE SYSTEM
04/28/17
Cryo-EM model of B41 SOSIP.664 in complex with soluble CD4 (D1-D2) and fragment antigen binding variable domain of 17b
HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1
homo sapiens
homo sapiens
human immunodeficiency virus 1
Ozorowski, G., Pallesen, J., Ward, A.B.
3.7
ELECTRON MICROSCOPY / HOMOLOGY MODEL
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
4hdi
H
L
0
null
null
null
null
IMMUNE SYSTEM
10/02/12
Crystal Structure of 3E5 IgG3 FAB from mus musculus
MUS MUSCULUS
mus musculus
mus musculus
null
Janda, A., Eryilmaz, E., Kim, J., Cordero, R.J.B., Cowburn, D., Casadevall, A.
2.449
X-RAY DIFFRACTION
0.263
0.208
false
true
IGHV5
IGKV1
Kappa
null
null
null
null
null
5n2k
N
M
0
null
null
null
null
IMMUNE SYSTEM
02/07/17
Structure of unbound Briakinumab FAb
HOMO SAPIENS
homo sapiens
homo sapiens
null
Bloch, Y., Savvides, S.N.
2.219
X-RAY DIFFRACTION
0.234
0.204
false
true
IGHV3
IGLV1
Lambda
null
null
null
null
null
6sge
B
null
0
C
protein
null
rho-related gtp-binding protein rhob
IMMUNE SYSTEM
08/04/19
Crystal structure of Human RHOB-GTP in complex with nanobody B6
HOMO SAPIENS
homo sapiens
null
homo sapiens
Soulie, S., Gence, R., Cabantous, S., Lajoie-Mazenc, I., Favre, G., Pedelacq, J.D.
1.5
X-RAY DIFFRACTION
0.188
0.161
false
true
IGHV3
null
null
null
null
null
null
null
4d3c
H
L
0
A
protein
null
hepatocyte growth factor
null
10/21/14
Crystal structure of the NK1 domain of HGF in complex with anti-HGF monoclonal antibody SFN68.
HOMO SAPIENS; ORYCTOLAGUS CUNICULUS
oryctolagus cuniculus
oryctolagus cuniculus
homo sapiens
Kang, Y.J., Kim, K.L., Cho, H.S., Chung, J.H.
2.62
X-RAY DIFFRACTION
0.29758
0.26760
false
false
IGHV1
IGKV1
Kappa
null
null
null
null
null
7bu7
B
null
0
A
protein
null
endolysin,endolysin,beta-1 adrenergic receptor chimera
MEMBRANE PROTEIN
04/04/20
Structure of human beta1 adrenergic receptor bound to BI-167107 and nanobody 6B9
ENTEROBACTERIA PHAGE T4; HOMO SAPIENS; CAMELIDAE MIXED LIBRARY
camelidae mixed library
null
enterobacteria phage t4, homo sapiens
Xu, X., Kaindl, J., Clark, M., Hubner, H., Hirata, K., Sunahara, R., Gmeiner, P., Kobilka, B.K., Liu, X.
2.6
X-RAY DIFFRACTION
0.270
0.244
false
true
IGHV1
null
null
null
null
null
null
null
5bk5
B
A
0
null
null
null
null
IMMUNE SYSTEM
09/12/17
Crystal structure of the anti-circumsporozoite protein 663 germline antibody
HOMO SAPIENS
homo sapiens
homo sapiens
null
Scally, S.W., Bosch, A., Triller, G., Wardemann, H., Julien, J.P.
3.0
X-RAY DIFFRACTION
0.314
0.257
false
true
IGHV3
IGKV2
Kappa
null
null
null
null
null
4rau
H
G
0
I
protein
null
platelet factor 4
IMMUNE SYSTEM
09/11/14
crystal structure of RTOFab in complex with human PF4
MUS MUSCULUS; HOMO SAPIENS
mus musculus
mus musculus
homo sapiens
Cai, Z., Zhu, Z., Liu, Q., Greene, M.I.
3.74
X-RAY DIFFRACTION
0.284
0.243
false
true
IGHV5
IGKV10
Kappa
null
null
null
null
null
3chn
A
L
5
null
null
null
null
IMMUNE SYSTEM
03/10/08
Solution structure of human secretory IgA1
HOMO SAPIENS
homo sapiens
homo sapiens
null
Bonner, A., Almogren, A., Furtado, P.B., Kerr, M.A., Perkins, S.J.
NOT
SOLUTION SCATTERING / HOMOLOGY MODEL
null
null
false
false
IGHV1
IGKV1
Kappa
null
null
null
null
null
6vmk
Z
Y
0
a
protein
null
unknown
HYDROLASE/IMMUNE SYSTEM
01/28/20
Crystal structure of human Complement Factor D with anti-Factor D Fab 20D12
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Wu, P., Harris, S.F., Eigenbrot, C.
3.01
X-RAY DIFFRACTION
0.215
0.174
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
3eo9
H
L
0
null
null
null
null
IMMUNE SYSTEM
09/26/08
Crystal structure the Fab fragment of Efalizumab
HOMO SAPIENS
homo sapiens
homo sapiens
null
Li, S., Ding, J.
1.8
X-RAY DIFFRACTION
0.217
0.189
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7a4d
C
null
0
E
peptide
null
aph coiled-coil
DE NOVO PROTEIN
08/19/20
Crystal structure of the APH coiled-coil in complex with nanobodies Nb28 and Nb30
LAMA GLAMA; SYNTHETIC CONSTRUCT
lama glama
null
synthetic construct
Hadzi, S.
2.694
X-RAY DIFFRACTION
0.223
0.177
false
true
IGHV1
null
null
null
null
null
null
null
5uk4
q
null
0
Q
protein
null
anti-vesicular stomatitis virus n vhh
Viral Protein/RNA/Immune System
01/19/17
VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307
VESICULAR STOMATITIS INDIANA VIRUS (STRAIN SAN JUAN); VICUGNA PACOS
vicugna pacos
null
vesicular stomatitis indiana virus (strain sanjuan)
Hanke, L., Knockenhauer, K.E., Ploegh, H.L., Schwartz, T.U.
3.204
X-RAY DIFFRACTION
0.288
0.237
false
false
IGHV1
null
null
null
null
null
null
null
6n4r
J
I
0
A | B | F
protein | protein | peptide
NA | NA | NA
nav1.7 vsd2-navab chimera | nav1.7 vsd2-navab chimera | beta/omega-theraphotoxin-tp2a
MEMBRANE PROTEIN
11/20/18
CryoEM structure of Nav1.7 VSD2 (deactived state) in complex with the gating modifier toxin ProTx2
ARCOBACTER BUTZLERI (STRAIN RM4018); HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
arcobacter butzleri (strain rm4018), homosapiens | arcobacter butzleri (strain rm4018), homosapiens | thrixopelma pruriens
Xu, H., Rohou, A., Arthur, C.P., Estevez, A., Ciferri, C., Payandeh, J., Koth, C.M.
4.2
ELECTRON MICROSCOPY
null
null
false
false
IGHV5
IGKV4
Kappa
null
null
null
null
null
6x19
N
null
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
05/18/20
Non peptide agonist CHU-128, bound to Glucagon-Like peptide-1 (GLP-1) Receptor
HOMO SAPIENS; LAMA GLAMA
lama glama
null
homo sapiens | homo sapiens
Belousoff, M.J., Zhang, X., Danev, R.
2.1
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
7kkz
H
L
0
null
null
null
null
ANTIVIRAL PROTEIN
10/28/20
Crystal structure of mouse anti-HIV potent neutralizing antibody M4H2K1
MUS MUSCULUS
mus musculus
mus musculus
null
Kumar, S., Wilson, I.A.
1.5
X-RAY DIFFRACTION
0.216
0.183
false
true
IGHV6
IGKV3
Kappa
null
null
null
null
null
4py8
I
J
0
B | A
protein | protein
NA | NA
hemagglutinin ha2 chain | hemagglutinin ha1 chain
VIRAL PROTEIN/IMMUNE SYSTEM
03/26/14
Crystal structure of Fab 3.1 in complex with the 1918 influenza virus hemagglutinin
INFLUENZA A VIRUS; HOMO SAPIENS
homo sapiens
homo sapiens
influenza a virus | influenza a virus
Dreyfus, C.
2.91
X-RAY DIFFRACTION
0.242
0.193
false
true
IGHV3
IGKV1
Kappa
0
-12.278197
SPR
null
TBD
7o85
null
N
0
M | O
protein | protein
NA | NA
protective antigen pa-63 | fab
TOXIN
04/14/21
Anthrax toxin prepore in complex with the neutralizing Fab cAb29
BACILLUS ANTHRACIS; MUS MUSCULUS
null
mus musculus
bacillus anthracis | mus musculus
Hoelzgen, F., Zalk, R., Alcalay, R., Cohen-Schwartz, S., Garau, G., Shahar, A., Mazor, O., Frank, G.A.
3.3
ELECTRON MICROSCOPY
null
null
false
true
unknown
unknown
unknown
null
null
null
null
null
6zqk
A
null
0
null
null
null
null
ANTITUMOR PROTEIN
07/09/20
HER2-binding scFv-Fab fusion 841
MUS MUSCULUS
mus musculus
null
null
Kast, F., Schwill, M., Stueber, J.C., Pfundstein, S., Nagy-Davidescu, G., Monne Rodriguez, J.M., Seehusen, F., Richter, C.P., Honegger, A., Hartmann, K.P., Weber, T.G., Kroener, F., Ernst, P., Piehler, J., Plueckthun, A.
2.2
X-RAY DIFFRACTION
0.241
0.202
false
true
IGHV3
null
null
null
null
null
null
null
6weq
G
H
0
B
protein
null
non-structural protein 1
VIRAL PROTEIN
04/02/20
DENV1 NS1 in complex with neutralizing 2B7 Fab fragment
DENGUE VIRUS 1; MUS MUSCULUS
mus musculus
mus musculus
dengue virus 1
Akey, D.L., Smith, J.L.
3.2
X-RAY DIFFRACTION
0.261
0.207
false
false
IGHV1
IGKV3
Kappa
null
null
null
null
null
4rzc
H
L
0
H
carbohydrate
M6P
ALPHA-D-MANNOSE-6-PHOSPHATE
IMMUNE SYSTEM
12/19/14
Fv M6P-1 in complex with mannose-6-phosphate
ORYCTOLAGUS CUNICULUS
oryctolagus cuniculus
oryctolagus cuniculus
oryctolagus cuniculus
Blackler, R.J., Evans, D.W., Evans, S.V., Muller-Loennies, S.
2.723
X-RAY DIFFRACTION
0.267
0.226
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
6ey0
E
null
0
A
protein
null
t9ss component cytoplasmic membrane protein porm
PROTEIN TRANSPORT
11/10/17
N-terminal part (residues 30-212) of PorM with the llama naobody nb01
PORPHYROMONAS GINGIVALIS; LAMA GLAMA
lama glama
null
porphyromonas gingivalis
Leone, P., Roche, J., Cambillau, C., Roussel, A.
2.4
X-RAY DIFFRACTION
0.242
0.213
false
true
IGHV1
null
null
null
null
null
null
null
6mek
B
D
0
A
protein
null
e2 glycoprotein
IMMUNE SYSTEM
09/06/18
Broadly neutralizing antibodies against HCV use a CDRH3 disulfide motif to recognize an E2 glycoprotein site that can be targeted for vaccine design
HEPACIVIRUS C; HOMO SAPIENS
homo sapiens
homo sapiens
hepacivirus c
Flyak, A.I., Bjorkman, P.J.
3.1
X-RAY DIFFRACTION
0.290
0.223
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
7wvm
A
B
0
E
protein
null
programmed cell death protein 1
IMMUNE SYSTEM/ANTITUMOR PROTEIN
02/10/22
The complex structure of PD-1 and cemiplimab
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Lu, D., Xu, Z.P., Liu, K.F., Tan, S.G., Gao, G.F., Chai, Y.
3.4
X-RAY DIFFRACTION
0.287
0.247
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
6krz
H
I
0
C
protein
null
adiponectin receptor protein 1
MEMBRANE PROTEIN/IMMUNE SYSTEM
08/22/19
Crystal structure of the human adiponectin receptor 1 D208A mutant
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens
Tanabe, H., Fujii, Y., Okada-Iwabu, M., Iwabu, M., Yamauchi, T., Kadowaki, T., Yokoyama, S.
3.05
X-RAY DIFFRACTION
0.273
0.216
false
true
IGHV1
IGKV12
Kappa
null
null
null
null
null
5muq
H
L
0
null
null
null
null
IMMUNE SYSTEM
01/13/17
Crystal structure of DC8E8 Fab at pH 7.0 containing a Zn atom
MUS MUSCULUS
mus musculus
mus musculus
null
Skrabana, R., Novak, M., Cehlar, O., Kontsekova, E.
2.62
X-RAY DIFFRACTION
0.279
0.212
false
false
IGHV1
IGKV8
Kappa
null
null
null
null
null
6z1z
A
null
0
null
null
null
null
IMMUNE SYSTEM
05/14/20
Structure of the anti-CD9 nanobody 4C8
LAMA GLAMA
lama glama
null
null
Neviani, N., Oosterheert, W., Pearce, N.M., Lutz, M., Kroon-Batenburg, L.M.J., Gros, P.
1.7
X-RAY DIFFRACTION
0.231
0.201
false
true
IGHV1
null
null
null
null
null
null
null
7f4i
N
null
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
06/18/21
Cryo-EM structure of SHU9119-bound melanocortin-1 receptor in complex with Gs protein and Nb35
HOMO SAPIENS; SYNTHETIC CONSTRUCT; SYNTHETIC CONSTRUCT
synthetic construct
null
homo sapiens | homo sapiens
Ma, S., Chen, Y., Dai, A., Yin, W., Guo, J., Yang, D., Zhou, F., Jiang, Y., Wang, M.-W., Xu, H.E.
3.1
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
1fl6
H
L
0
H
Hapten
AAH
?
IMMUNE SYSTEM
08/11/00
THE HAPTEN COMPLEXED GERMLINE PRECURSOR TO SULFIDE OXIDASE CATALYTIC ANTIBODY 28B4
MUS MUSCULUS; HOMO SAPIENS
homo sapiens
mus musculus
homo sapiens
Yin, J., Mundorff, E.C., Yang, P.L., Wendt, K.U., Hanway, D., Stevens, R.C., Schultz, P.G.
2.8
X-RAY DIFFRACTION
0.271
0.216
false
true
IGHV3
IGKV1
Kappa
0.000025
null
SPR
null
11535051
7kqb
K
J
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
11/14/20
SARS-CoV-2 spike glycoprotein:Fab 5A6 complex I
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Asarnow, D., Charles, C., Cheng, Y.
2.42
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
4xcy
E
F
0
A
Hapten
44G
(2S)-3-{[(R)-{[(2R)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-2-(hexanoyloxy)propyl hexanoate
IMMUNE SYSTEM
12/18/14
Crystal structure of human 4E10 Fab in complex with phosphatidylglycerol (06:0 PG)
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Irimia, A., Stanfield, R.L., Wilson, I.A.
3.96
X-RAY DIFFRACTION
0.291
0.244
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
7bm5
D
C
0
null
null
null
null
IMMUNE SYSTEM
01/19/21
Crystal structure of Fab1, the Fab fragment of the anti-BamA monoclonal antibody MAB1
HOMO SAPIENS
homo sapiens
homo sapiens
null
White, P., Storek, K.M., Rutherford, S.T., Radford, S.E.
2.95
X-RAY DIFFRACTION
0.290
0.257
false
true
IGHV5
IGKV12
Kappa
null
null
null
null
null
5aco
H
L
0
A
protein
null
hiv-1 envelope glycoprotein
null
08/17/15
Cryo-EM structure of PGT128 Fab in complex with BG505 SOSIP.664 Env trimer
HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS
homo sapiens
homo sapiens
human immunodeficiency virus 1
Lee, J.H., Ward, A.B.
4.36
ELECTRON MICROSCOPY
null
null
false
true
IGHV4
IGLV2
Lambda
null
null
null
null
null
1hez
B
A
0
E
protein
null
protein l
ANTIBODY
11/27/00
antibody-antigen complex
HOMO SAPIENS; FINEGOLDIA MAGNA
homo sapiens
homo sapiens
finegoldia magna
Graille, M., Stura, E.A., Housden, N.G., Bottomley, S.P., Taussig, M.J., Sutton, B.J., Gore, M.G., Charbonnier, JB.
2.7
X-RAY DIFFRACTION
0.278
0.215
false
false
IGHV3
IGKV1
Kappa
0
-9.32
Other
25
11587642
6zer
H
L
0
E
protein
null
rbd
VIRAL PROTEIN/IMMUNE SYSTEM
06/16/20
Crystal structure of receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with EY6A Fab
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhou, D., Zhao, Y., Fry, E.E., Ren, J., Stuart, D.I.
3.8
X-RAY DIFFRACTION
0.251
0.212
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7bub
G
I
0
B
protein
null
dengue virus serotype2 e protein
VIRUS
04/06/20
Cryo-EM structure of Dengue virus serotype 2 complexed with Fab SIgN-3C at pH 6.5
HOMO SAPIENS; DENGUE VIRUS 2
homo sapiens
homo sapiens
dengue virus 2
Zhang, S., Chew, S.V., Lim, X.N., Ng, T.S., Kostyuchenko, V.A., Lok, S.M.
4.2
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
5x8m
B
C
0
A
protein
null
programmed cell death 1 ligand 1
IMMUNE SYSTEM
03/03/17
PD-L1 in complex with durvalumab
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Heo, Y.S., Lee, H.T.
2.661
X-RAY DIFFRACTION
0.219
0.181
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
7rw2
I
K
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
08/19/21
Cryo-EM structure of NTD-directed neutralizing antibody 5-7 in complex with prefusion SARS-CoV-2 spike glycoprotein
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Cerutti, G., Shapiro, L.
3.5
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
3f12
B
A
0
null
null
null
null
IMMUNE SYSTEM
10/27/08
Germline V-genes sculpt the binding site of a family of antibodies neutralizing human cytomegalovirus
HOMO SAPIENS
homo sapiens
homo sapiens
null
Thomson, C.A., Bryson, S., McLean, G.R., Creagh, A.L., Pai, E.F., Schrader, J.W.
2.95
X-RAY DIFFRACTION
0.320
0.300
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
7s4g
C
D
0
G
peptide
null
lymphocyte antigen 6 complex locus protein g6d
SIGNALING PROTEIN
09/08/21
Fab fragment bound to the Cter peptide of Ly6G6D
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Rouge, L., Lupardus, P.
2.2
X-RAY DIFFRACTION
0.235
0.192
false
true
IGHV1
IGKV4
Kappa
null
null
null
null
null
6fg2
F
G
0
null
null
null
null
IMMUNE SYSTEM
01/09/18
CRYSTAL STRUCTURE OF FAB OF NATALIZUMAB IN COMPLEX WITH FAB OF NAA84.
HOMO SAPIENS
homo sapiens
homo sapiens
null
Bertrand, T., Pouzieux, S.
2.788
X-RAY DIFFRACTION
0.263
0.238
false
true
IGHV3
IGLV3
Lambda
null
null
null
null
null
6dbd
C
null
0
null
null
null
null
IMMUNE SYSTEM
05/03/18
Crystal Structure of VHH R326
LAMA GLAMA
lama glama
null
null
Brooks, C.L., Toride King, M., Huh, I.
1.755
X-RAY DIFFRACTION
0.182
0.160
false
true
unknown
unknown
unknown
null
null
null
null
null
3nif
E
F
0
C
protein
null
integrin alphaiib beta3
CELL ADHESION/BLOOD CLOTTING
06/15/10
The Closed Headpiece of Integrin IIb 3 and its Complex with an IIb 3 -Specific Antagonist That Does Not Induce Opening
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens
Zhu, J.H., Zhu, J.Q., Springer, T.A.
2.4
X-RAY DIFFRACTION
0.216
0.176
false
true
IGHV14
IGKV14
Kappa
null
null
null
null
null
5xxy
H
L
0
A
protein
null
programmed cell death 1 ligand 1
IMMUNE SYSTEM
07/05/17
Complex structure of PD-L1 with atezolizumab Fab
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Zhou, A., Zhang, F.
2.9
X-RAY DIFFRACTION
0.295
0.236
false
true
IGHV3
IGKV1
Kappa
0
-10.916327
ELISA
null
TBD
7l06
G
E
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
12/11/20
Cryo-EM structure of SARS-CoV-2 2P S ectodomain bound to two copies of domain-swapped antibody 2G12
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Manne, K., Henderson, R., Acharya, P.
3.3
ELECTRON MICROSCOPY
null
null
false
true
unknown
IGKV1
Kappa
null
null
null
null
null
6k2i
A
null
13
null
null
null
null
AFB1-BINDING PROTEIN
05/14/19
Solution structure of camelid nanobody Nb11 against aflatoxin B1
VICUGNA PACOS
vicugna pacos
null
null
Nie, Y., Li, S.L., He, T., Zhu, J., Yang, Y.H.
NOT
SOLUTION NMR
null
null
false
true
IGHV1
null
null
null
null
null
null
null
4xx1
M
O
0
J
protein
null
phosphatidylcholine-sterol acyltransferase
Hydrolase/Immune system
01/29/15
Low resolution structure of LCAT in complex with Fab1
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Piper, D.E., Walker, N.P.C., Romanow, W.G., Thibault, S.T.
3.6
X-RAY DIFFRACTION
0.280
0.196
false
true
IGHV3
IGLV3
Lambda
null
null
null
null
null
6war
H
null
0
G
protein
null
spike protein
VIRAL PROTEIN/IMMUNE SYSTEM
04/08/20
Crystal structure of the MERS-CoV RBD bound by the neutralizing single-domain antibody MERS VHH-55
MIDDLE EAST RESPIRATORY SYNDROME-RELATED CORONAVIRUS; LAMA GLAMA
lama glama
null
middle east respiratory syndrome-relatedcoronavirus
Wrapp, D., Torres, G.M., McLellan, J.S.
3.4
X-RAY DIFFRACTION
0.268
0.214
false
true
IGHV1
null
null
null
null
null
null
null
3d0l
B
A
0
C
peptide
null
hyb3k peptide construct
IMMUNE SYSTEM
05/01/08
Crystal structure of the HIV-1 broadly neutralizing antibody 2F5 in complex with the gp41 FP-MPER Hyb3K construct 514GIGALFLGFLGAAGS528KK-Ahx-655KNEQELLELDKWASLWN671
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
null
Bryson, S., Julien, J.P., Pai, E.F.
2.35
X-RAY DIFFRACTION
0.229
0.211
false
false
IGHV2
IGKV1
Kappa
null
null
null
null
null
6jfh
M
N
0
C
protein
null
zikv structural e protein
ANTIVIRAL PROTEIN
04/10/19
The asymmetric-reconstructed cryo-EM structure of Zika virus-FabZK2B10 complex
ZIKA VIRUS; HOMO SAPIENS
homo sapiens
homo sapiens
zika virus
Wang, L., Wang, R.K., Wang, L., Ben, H.J., Yu, L., Gao, F., Shi, X.L., Yin, C.B., Zhang, F.C., Xiang, Y., Zhang, L.Q.
20
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
2bx5
null
H
0
null
null
null
null
ANTIBODY
07/22/05
Is FR1 the antibody's Achillies heel
ESCHERICHIA COLI
null
null
null
James, L.C.
2.7
X-RAY DIFFRACTION
0.290
0.250
false
true
null
IGKV1
Kappa
null
null
null
null
null
2qtj
D
N
7
null
null
null
null
IMMUNE SYSTEM
08/02/07
Solution structure of human dimeric immunoglobulin A
HOMO SAPIENS
homo sapiens
homo sapiens
null
Bonner, A., Furtado, P.B., Almogren, A., Kerr, M.A., Perkins, S.J.
NOT
SOLUTION SCATTERING
null
null
false
false
IGHV1
IGKV1
Kappa
null
null
null
null
null
3p0g
B
null
0
A
protein
null
beta-2 adrenergic receptor, lysozyme
SIGNALING PROTEIN, Hydrolase
09/28/10
Structure of a nanobody-stabilized active state of the beta2 adrenoceptor
HOMO SAPIENS, ENTEROBACTERIA PHAGE T4; LAMA GLAMA
lama glama
null
homo sapiens, enterobacteria phage t4
Rasmussen, S.G.F., Choi, H.-J., Fung, J.J., Pardon, E., Casarosa, P., Chae, P.S., DeVree, B.T., Rosenbaum, D.M., Thian, F.S., Kobilka, T.S., Schnapp, A., Konetzki, I., Sunahara, R.K., Gellman, S.H., Pautsch, A., Steyaert, J., Weis, W.I., Kobilka, B.K.
3.5
X-RAY DIFFRACTION
0.308
0.235
false
true
IGHV1
null
null
0
-13.745742
Unknown
null
TBD
5iop
B
A
0
null
null
null
null
IMMUNE SYSTEM
03/08/16
Cetuximab Fab in complex with 4-bromophenylalanine meditope variant
MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT
mus musculus, homo sapiens
mus musculus, homo sapiens
null
Bzymek, K.P., Williams, J.C.
2.499
X-RAY DIFFRACTION
0.226
0.177
false
true
IGHV2
IGKV5
Kappa
0.000029
-6.190397
Unknown
null
TBD
5mu2
I
J
0
T
peptide
null
synthetic peptide containing the cii583-591 epitope ofcollagen type ii
IMMUNE SYSTEM
01/12/17
ACC1 Fab fragment in complex with CII583-591 (CG10)
MUS MUSCULUS; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
mus musculus
Dobritzsch, D., Holmdahl, R., Ge, C.
2.7
X-RAY DIFFRACTION
0.228
0.206
false
false
IGHV6
IGKV3
Kappa
null
null
null
null
null
6peh
A
B
0
null
null
null
null
IMMUNE SYSTEM
06/20/19
Crystal structure of rabbit monoclonal anti-HIV antibody 1C2
HOMO SAPIENS
homo sapiens
homo sapiens
null
Liban, T., Pancera, M.
2.296
X-RAY DIFFRACTION
0.255
0.219
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
3v6f
E
F
0
null
null
null
null
IMMUNE SYSTEM
12/19/11
Crystal Structure of an anti-HBV e-antigen monoclonal Fab fragment (e6), unbound
MUS MUSCULUS
mus musculus
mus musculus
null
Dimattia, M.A., Watts, N.R., Stahl, S.J., Grimes, J.M., Steven, A.C., Stuart, D.I., Wingfield, P.T.
2.52
X-RAY DIFFRACTION
0.220
0.179
false
false
IGHV5
IGKV8
Kappa
null
null
null
null
null
2otu
B
A
0
P
peptide
null
peptide antigen
IMMUNE SYSTEM
02/09/07
Crystal structure of Fv polyglutamine complex
MUS MUSCULUS; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
null
Li, P.
1.68
X-RAY DIFFRACTION
0.214
0.200
false
true
IGHV5
IGLV3
Lambda
null
null
null
null
null