pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 354
values | r_factor stringclasses 342
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
3j7e | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 06/23/14 | Electron cryo-microscopy of human papillomavirus 16 and H16.V5 Fab fragments | MUS MUSCULUS | mus musculus | mus musculus | null | Lee, H., Brendle, S.A., Bywaters, S.M., Christensen, N.D., Hafenstein, S. | 13.6 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
6dzl | H | K | 0 | E | B | F | protein | protein | protein | NA | NA | NA | ebola virus makona gp2 | ebola virus makona gp1 | ebola virus makona gp2 | VIRAL PROTEIN | 07/05/18 | Ebola virus Makona variant GP (mucin-deleted) in complex with pan-ebolavirus human antibody ADI-15878 Fab | ZAIRE EBOLAVIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | zaire ebolavirus | zaire ebolavirus | zaire ebolavirus | Murin, C.D., Ward, A.B. | 4.14 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6gxx | H | L | 0 | null | null | null | null | PROTEIN BINDING | 06/27/18 | Fab fragment of an antibody selective for alpha-1-antitrypsin in the native conformation | MUS MUSCULUS | mus musculus | mus musculus | null | Elliston, E.L.K., Miranda, E., Perez, J., Lomas, D.A., Irving, J.A. | 1.85 | X-RAY DIFFRACTION | 0.223 | 0.186 | false | false | IGHV5 | IGKV3 | Kappa | null | null | null | null | null |
6wix | D | E | 0 | B | protein | null | envelope glycoprotein gp41 | VIRAL PROTEIN/IMMUNE SYSTEM | 04/10/20 | Crystal Structure of HIV-1 MI369 RnS-DS.SOSIP Prefusion Env Trimer in Complex with Human Antibodies 3H109L and 35O22 at 3.5 Angstrom | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Lai, Y.-T., Olia, A., Kwong, P.D. | 2.67 | X-RAY DIFFRACTION | 0.270 | 0.225 | false | true | unknown | unknown | unknown | null | null | null | null | null |
5mud | null | B | 0 | null | null | null | null | IMMUNE SYSTEM | 01/13/17 | Crystal structure of an amyloidogenic light chain dimer H6 | HOMO SAPIENS | null | homo sapiens | null | Oberti, L., Bacarizo, J., Maritan, M., Rognoni, P., Bolognesi, M., Ricagno, S. | 2.34 | X-RAY DIFFRACTION | 0.249 | 0.205 | false | true | null | IGLV1 | Lambda | null | null | null | null | null |
7mfa | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 04/08/21 | Crystal structure of antibody 10E8v4-P100fA+P100gA Fab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Kwon, Y.D., Kwong, P.D. | 2.4 | X-RAY DIFFRACTION | 0.286 | 0.238 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
2z4q | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 06/22/07 | Crystal structure of a murine antibody FAB 528 | MUS MUSCULUS | mus musculus | mus musculus | null | Nakanishi, T., Tsumoto, K., Asano, R., Kondo, H., Kumagai, I. | 2.3 | X-RAY DIFFRACTION | 0.228 | 0.191 | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7x9e | A | B | 0 | E | peptide | null | spike peptide | IMMUNE SYSTEM/VIRAL PROTEIN | 03/15/22 | Crystal structure of the 76E1 Fab in complex with a SARS-CoV-2 spike peptide | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Chen, X., Zhang, T., Ding, J., Sun, X., Sun, B. | 2.6 | X-RAY DIFFRACTION | 0.243 | 0.195 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
7a69 | C | B | 0 | A | protein | null | multidrug resistance protein 1 | TRANSPORT PROTEIN | 08/25/20 | Nanodisc reconstituted human ABCB1 in complex with MRK16 Fab and vincristine | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Nosol, K., Locher, K.P. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV5 | IGKV1 | Kappa | null | null | null | null | null |
7vv3 | S | s | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 11/04/21 | Cryo-EM structure of pseudoallergen receptor MRGPRX2 complex with linear cortistatin-14 | HOMO SAPIENS | homo sapiens | null | homo sapiens | homo sapiens | Yu, L., Fang, Y. | 2.97 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
7lf2 | K | L | 0 | J | protein | null | arginase-1 | HYDROLASE/IMMUNE SYSTEM | 01/15/21 | Trimeric human Arginase 1 in complex with mAb4 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Gomez-Llorente, Y., Scapin, G., Palte, R.L. | 3.72 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
3j93 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 12/02/14 | Fitting of Fab into the cryoEM density map of EV71 procapsid in complex with Fab22A12 | MUS MUSCULUS | mus musculus | mus musculus | null | Shingler, K.L., Cifuente, J.O., Ashley, R.E., Makhov, A.M., Conway, J.F., Hafenstein, S. | 8.8 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV6 | Kappa | null | null | null | null | null |
5ig7 | A | B | 0 | C | peptide | null | peptide pro-leu-gln-pro-gln-gln-pro-phe-pro | IMMUNE SYSTEM | 02/27/16 | Crystal structure of anti-gliadin 1002-1E01 Fab fragment in complex of peptide PLQPQQPFP | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | homo sapiens | Chen, X., Zhao, Y., Harlos, K., Snir, O., Sollid, L.M. | 1.97 | X-RAY DIFFRACTION | 0.236 | 0.190 | false | true | IGHV3 | IGLV4 | Lambda | null | null | null | null | null |
2ltq | C | B | 9 | A | protein | null | disulfide bond formation protein b | MEMBRANE PROTEIN, OXIDOREDUCTASE | 05/30/12 | High resolution structure of DsbB C41S by joint calculation with solid-state NMR and X-ray data | ESCHERICHIA COLI; MUS MUSCULUS | mus musculus | mus musculus | escherichia coli | Tang, M., Sperling, L.J., Schwieters, C.D., Nesbitt, A.E., Gennis, R.B., Rienstra, C.M. | NOT | SOLID-STATE NMR | null | null | false | false | IGHV5 | IGKV8 | Kappa | null | null | null | null | null |
5ocl | H | null | 0 | null | null | null | null | IMMUNE SYSTEM | 07/03/17 | Nanobody-anti-VGLUT nanobody complex | VICUGNA PACOS; LAMA GLAMA | vicugna pacos | null | null | Dutzler, R., Schenck, S., Kunz, L. | 2.2 | X-RAY DIFFRACTION | 0.208 | 0.188 | false | true | IGHV1 | null | null | null | null | null | null | null |
5wi9 | F | E | 0 | B | protein | null | beta-klotho | STRUCTURAL PROTEIN | 07/18/17 | Crystal structure of KL with an agonist Fab | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Johnstone, S., Min, X., Wang, Z. | 2.7 | X-RAY DIFFRACTION | 0.270 | 0.216 | false | true | IGHV3 | IGKV3 | Kappa | 0 | -13.731801 | SPR | null | TBD |
7pg8 | N | M | 0 | Q | protein | null | ion transport protein,voltage-gated sodium channel | MEMBRANE PROTEIN | 08/13/21 | NaV_Ae1/Sp1CTD_pore-ANT05 complex | HOMO SAPIENS; ALKALILIMNICOLA EHRLICHII MLHE-1; RUEGERIA POMEROYI DSS-3 | homo sapiens | homo sapiens | alkalilimnicola ehrlichii mlhe-1, ruegeriapomeroyi dss-3 | Lolicato, M., Arrigoni, C. | 4.5 | X-RAY DIFFRACTION | 0.352 | 0.303 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
4evn | O | P | 0 | null | null | null | null | immune system | 04/26/12 | Crystal Structure of Fab CR6261 (somatic heavy chain with germline-reverted light chain) | HOMO SAPIENS | homo sapiens | homo sapiens | null | Whittle, J.R.R. | 2.851 | X-RAY DIFFRACTION | 0.293 | 0.230 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
5f7y | D | null | 0 | B | protein | null | adhesin binding fucosylated histo-blood group antigen | CELL ADHESION | 12/08/15 | Blood group antigen binding adhesin BabA of Helicobacter pylori strain 17875 in complex with blood group A type-1 hexasaccharide | HELICOBACTER PYLORI; LAMA GLAMA | lama glama | null | helicobacter pylori | Moonens, K., Gideonsson, P., Subedi, S., Romao, E., Oscarson, S., Muyldermans, S., Boren, T., Remaut, H. | 2.44 | X-RAY DIFFRACTION | 0.205 | 0.176 | false | true | IGHV1 | null | null | null | null | null | null | null |
7ps7 | A | B | 0 | E | protein | null | surface glycoprotein | VIRAL PROTEIN | 09/22/21 | Crystal structure of the receptor binding domain of SARS-CoV-2 beta variant spike glycoprotein in complex with Beta-40 Fab | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, D., Ren, J., Stuart, D.I. | 3.9 | X-RAY DIFFRACTION | 0.284 | 0.233 | false | true | IGHV4 | IGLV3 | Lambda | null | null | null | null | null |
3a6c | H | L | 0 | Y | protein | null | lysozyme c | IMMUNE SYSTEM/HYDROLASE | 08/28/09 | Crystal Structure of HyHEL-10 Fv mutant LN92D complexed with hen egg white lysozyme | MUS MUSCULUS; GALLUS GALLUS | mus musculus | mus musculus | gallus gallus | Yokota, A., Tsumoto, K., Shiroishi, M., Nakanishi, T., Kondo, H., Kumagai, I. | 1.8 | X-RAY DIFFRACTION | 0.216 | 0.186 | false | true | IGHV3 | IGKV5 | Kappa | 0 | -11.28 | ITC | 30 | 20038580 |
1fl6 | B | A | 0 | B | Hapten | AAH | ? | IMMUNE SYSTEM | 08/11/00 | THE HAPTEN COMPLEXED GERMLINE PRECURSOR TO SULFIDE OXIDASE CATALYTIC ANTIBODY 28B4 | MUS MUSCULUS; HOMO SAPIENS | homo sapiens | mus musculus | homo sapiens | Yin, J., Mundorff, E.C., Yang, P.L., Wendt, K.U., Hanway, D., Stevens, R.C., Schultz, P.G. | 2.8 | X-RAY DIFFRACTION | 0.271 | 0.216 | false | true | IGHV3 | IGKV1 | Kappa | 0.000025 | null | SPR | null | 11535051 |
7mzj | C | D | 0 | B | protein | null | spike protein s1 | VIRAL PROTEIN | 05/24/21 | SARS-CoV-2 receptor binding domain bound to Fab WCSL 129 and Fab PDI 93 | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Pymm, P., Dietrich, M.H., Tan, L.L., Chan, L.J., Tham, W.H. | 2.4 | X-RAY DIFFRACTION | 0.268 | 0.222 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
5v8l | I | M | 0 | D | protein | null | gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 03/22/17 | BG505 SOSIP.664 trimer in complex with broadly neutralizing HIV antibodies 3BNC117 and PGT145 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Lee, J.H., Ward, A.B. | 4.3 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null |
1za6 | H | G | 0 | null | null | null | null | IMMUNE SYSTEM | 04/05/05 | The structure of an antitumor CH2-domain-deleted humanized antibody | HOMO SAPIENS | homo sapiens | homo sapiens | null | Larson, S.B., Day, J.S., Glaser, S., Braslawsky, G., McPherson, A. | 2.8 | X-RAY DIFFRACTION | 0.296 | 0.246 | false | true | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
5dd1 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 08/24/15 | Crystal structures in an anti-HIV antibody lineage from immunization of Rhesus macaques | MACACA MULATTA | macaca mulatta | macaca mulatta | null | Zhang, R., Verkoczy, L., Wiehe, K., Alam, S.M., Nicely, N.I., Santra, S., Bradley, T., Pemble, C., Gao, F., Montefiori, D.C., Bouton-Verville, H., Kelsoe, G., Parks, R., Foulger, A., Tomaras, G., Keple, T.B., Moody, M.A., Liao, H.-X., Haynes, B.F. | 1.597 | X-RAY DIFFRACTION | 0.228 | 0.185 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
6vi1 | J | I | 0 | Q | peptide | null | terminase, large subunit | IMMUNE SYSTEM | 01/11/20 | Structure of Fab4 bound to P22 TerL(1-33) | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | salmonella phage p22 | Cingolani, G., Lokareddy, R., Ko, Y. | 2.4 | X-RAY DIFFRACTION | 0.239 | 0.189 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5xf1 | C | D | 0 | A | protein | null | glucagon receptor,endolysin,glucagon receptor | SIGNALING PROTEIN | 04/06/17 | Structure of the Full-length glucagon class B G protein-coupled receptor | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens, enterobacteria phage t4 | Zhang, H., Qiao, A., Yang, D., Yang, L., Dai, A., de Graaf, C., Reedtz-Runge, S., Dharmarajan, V., Zhang, H., Han, G.Y., Grant, T., Sierra, R., Weierstall, U., Nelson, G., Liu, W., Wu, Y., Ma, L., Cai, X., Lin, G., Wu, X., Geng, Z., Dong, Y., Song, G., Griffin, P., Lau, J., Cherezov, V., Yang, H., Hanson, M., Stevens, ... | 3.19 | X-RAY DIFFRACTION | 0.231 | 0.205 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6w16 | H | L | 0 | F | protein | null | fusion glycoprotein f0,envelope glycoprotein fusion | IMMUNE SYSTEM | 06/03/20 | Crystal structure of a human metapneumovirus monomeric fusion protein complexed with 458 Fab | HUMAN METAPNEUMOVIRUS; HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human metapneumovirus, human immunodeficiencyvirus 1 | Huang, J., Mousa, J.J. | 3.1 | X-RAY DIFFRACTION | 0.234 | 0.190 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
1ohq | B | null | 0 | null | null | null | null | IMMUNOGLOBULIN | 05/30/03 | Crystal structure of HEL4, a soluble human VH antibody domain resistant to aggregation | HOMO SAPIENS | homo sapiens | null | null | Jespers, L., Schon, O., James, L.C., Veprintsev, D., Winter, G. | 2.0 | X-RAY DIFFRACTION | 0.26 | 0.182 | false | true | IGHV3 | null | null | null | null | null | null | null |
7ly2 | G | I | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 03/05/21 | SARS-CoV-2 S/S2M11/S2M28 Global Refinement | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID) | 2.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
1xf4 | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 09/13/04 | Structure of ligand-free Fab DNA-1 in space group P321 solved from crystals with perfect hemihedral twinning | MUS MUSCULUS | mus musculus | mus musculus | null | Schuermann, J.P., Prewitt, S.P., Deutscher, S.L., Tanner, J.J. | 2.5 | X-RAY DIFFRACTION | 0.224 | 0.183 | false | true | IGHV1 | IGKV12 | Kappa | null | null | null | null | null |
2adj | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 07/20/05 | Crystal structure of monoclonal anti-CD4 antibody Q425 in complex with Calcium | MUS MUSCULUS | mus musculus | mus musculus | null | Zhou, T., Hamer, D.H., Hendrickson, W.A., Sattentau, Q.J., Kwong, P.D. | 2.9 | X-RAY DIFFRACTION | 0.300 | 0.213 | false | false | IGHV5 | IGKV17 | Kappa | null | null | Unknown | null | TBD |
7mfr | B | A | 0 | P | peptide | null | gly-gly-met | IMMUNE SYSTEM | 04/10/21 | Crystal Structure of a Fab fragment bound to peptide GGM | ORYCTOLAGUS CUNICULUS; SYNTHETIC CONSTRUCT | oryctolagus cuniculus | oryctolagus cuniculus | homo sapiens | Sudhamsu, J. | 2.848 | X-RAY DIFFRACTION | 0.260 | 0.211 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7nx8 | A | B | 0 | E | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 03/17/21 | Crystal structure of the K417T mutant receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-222 and EY6A Fabs | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, D., Ren, J., Stuart, D. | 1.95 | X-RAY DIFFRACTION | 0.246 | 0.223 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
1ine | H | L | 0 | H | Hapten | EOT | [(1-[(BIS-CARBOXYMETHYL-AMINO)-METHYL]-2-{4-[3-(2-HYDROXY-ETHYL)-THIOUREIDO]-PHENY}-ETHYL)-CARBOXYMETHYL-AMINO]-ACETIC ACID | IMMUNOGLOBULIN | 06/14/93 | HOW THE ANTI-(METAL CHELATE) ANTIBODY CHA255 IS SPECIFIC FOR THE METAL ION OF ITS ANTIGEN: X-RAY STRUCTURES FOR TWO FAB'(SLASH)HAPTEN COMPLEXES WITH DIFFERENT METALS IN THE CHELATE | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Love, R.A., Butler, W.F. | 2.8 | X-RAY DIFFRACTION | unknown | 0.176 | false | false | IGHV5 | IGLV1 | Lambda | null | null | null | null | null |
6h5n | C | B | 0 | A | protein | null | gametocyte surface protein p45/48 | CELL INVASION | 07/25/18 | Plasmodium falciparum Pfs48/45 C-terminal domain bound to monoclonal antibody 85RF45.1 | PLASMODIUM FALCIPARUM; RATTUS NORVEGICUS | rattus norvegicus | rattus norvegicus | plasmodium falciparum | Lennartz, F., Higgins, M.K. | 3.23 | X-RAY DIFFRACTION | 0.282 | 0.261 | false | true | IGHV5 | IGLV3 | Lambda | null | null | null | null | null |
2gfb | F | E | 0 | null | null | null | null | IMMUNOGLOBULIN | 07/07/94 | CRYSTAL STRUCTURE OF A CATALYTIC FAB HAVING ESTERASE-LIKE ACTIVITY | MUS MUSCULUS | mus musculus | mus musculus | null | Golinelli-Pimpaneau, B., Knossow, M. | 3.0 | X-RAY DIFFRACTION | unknown | 0.213 | false | false | IGHV5 | IGKV9 | Kappa | null | null | null | null | null |
6gwn | B | null | 0 | A | protein | null | plasminogen activator inhibitor 1 | HYDROLASE | 06/25/18 | Crystal Structure of Stabilized Active Plasminogen Activator Inhibitor-1 (PAI-1-W175F) in Complex with Two Inhibitory Nanobodies (VHH-2g-42, VHH-2w-64) | HOMO SAPIENS; VICUGNA PACOS | vicugna pacos | null | homo sapiens | Sillen, M., Weeks, S.D., Strelkov, S.V., Declerck, P.J. | 2.03 | X-RAY DIFFRACTION | 0.250 | 0.208 | false | true | IGHV1 | null | null | null | null | null | null | null |
7v5n | B | A | 0 | D | nucleic-acid | null | dna (5'-d(*gp*cp*gp*gp*tp*tp*gp*gp*tp*gp*gp*tp*ap*gp*tp*tp*ap*cp*gp*tp*tp*cp* gp*c)-3') | IMMUNE SYSTEM/DNA | 08/17/21 | Crystal structure of Fab fragment of bevacizumab bound to DNA aptamer | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | synthetic construct | Hishiki, A., Tong, J., Todoroki, K., Hashimoto, H. | 1.7 | X-RAY DIFFRACTION | 0.210 | 0.178 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6nc3 | H | L | 0 | B | A | protein | protein | NA | NA | hiv-1 env amc011 v4.2 sosip gp41 | hiv-1 env amc011 v4.2 sosip gp120 | IMMUNE SYSTEM | 12/10/18 | AMC011 v4.2 SOSIP Env trimer in complex with fusion peptide targeting antibody VRC34 fragment antigen binding | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Cottrell, C.A., Ozorowski, G., Torres, J.L., Ward, A.B. | 4.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
5acm | null | A | 0 | null | null | null | null | null | 08/17/15 | Mcg immunoglobulin variable domain with methylene blue | HOMO SAPIENS | null | homo sapiens | null | Brumshtein, B., Esswein, S.R., Salwinski, L., Phillips, M.L., Ly, A.T., Cascio, D., Sawaya, M.R., Eisenberg, D.S. | 1.05 | X-RAY DIFFRACTION | 0.12234 | 0.11033 | false | true | null | IGLV2 | Lambda | null | null | null | null | null |
1mvf | B | null | 0 | D | peptide | null | pemi-like protein 1 | IMMUNE SYSTEM | 09/25/02 | MazE addiction antidote | CAMELUS DROMEDARIUS; ESCHERICHIA COLI | camelus dromedarius | null | escherichia coli | Loris, R., Marianovsky, I., Lah, J., Laeremans, T., Engelberg-Kulka, H., Glaser, G., Muyldermans, S., Wyns, L. | 1.65 | X-RAY DIFFRACTION | 0.249 | 0.218 | false | true | IGHV1 | null | null | null | null | null | null | null |
2yss | B | A | 0 | C | protein | null | lysozyme c | IMMUNE SYSTEM/HYDROLASE | 04/03/07 | Crystal structure of Humanized HYHEL-10 FV mutant(HQ39KW47Y)-HEN lysozyme complex | HOMO SAPIENS; GALLUS GALLUS | homo sapiens | homo sapiens | gallus gallus | Nakanishi, T., Tsumoto, K., Yokota, A., Kondo, H., Kumagai, I. | 2.4 | X-RAY DIFFRACTION | 0.265 | 0.218 | false | true | IGHV4 | IGKV3 | Kappa | null | null | null | null | null |
7s0c | H | L | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 08/30/21 | Structure of the SARS-CoV-2 S 6P trimer in complex with neutralizing antibody N-612-017 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Barnes, C.O., Bjorkman, P.J. | 3.25 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7coe | H | L | 0 | A | protein | null | spike glycoprotein | IMMUNE SYSTEM | 08/04/20 | Crystal structure of Receptor binding domain of MERS-CoV and KNIH90-F1 Fab complex | HOMO SAPIENS; MIDDLE EAST RESPIRATORY SYNDROME-RELATED CORONAVIRUS | homo sapiens | homo sapiens | middle east respiratory syndrome-relatedcoronavirus | Lee, J.Y., Song, J.Y., Lee, H.S., Hong, E., Jang, T.H. | 2.05 | X-RAY DIFFRACTION | 0.223 | 0.176 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6pci | O | R | 0 | B | E | protein | protein | NA | NA | virion spike glycoprotein | virion spike glycoprotein,virion spike glycoprotein,ebolavirus (makona) gp2 | immune system, viral protein | 06/17/19 | EBOV GPdMuc (Makona) in complex with rEBOV-520 and rEBOV-548 Fabs | EBOLA VIRUS; HOMO SAPIENS; ZAIRE EBOLAVIRUS | homo sapiens | homo sapiens | ebola virus | zaire ebolavirus, ebola virus | Ward, A.B., Murin, C.D., Alkutkar, T. | 4.12 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV3 | Kappa | null | null | null | null | null |
6wzl | C | D | 0 | F | protein | null | c-x-c motif chemokine 7 | IMMUNE SYSTEM | 05/14/20 | LY3041658 Fab bound to CXCL7 | HOMO SAPIENS; MACACA FASCICULARIS | homo sapiens | homo sapiens | macaca fascicularis | Durbin, J.D., Druzina, Z. | 2.29 | X-RAY DIFFRACTION | 0.222 | 0.193 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
5uea | H | L | 0 | D | protein | null | histone chaperone asf1 | IMMUNE SYSTEM | 12/29/16 | Structure of antigen-Fab complex with Histone chaperone ASF1 | HOMO SAPIENS; SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C) | homo sapiens | homo sapiens | saccharomyces cerevisiae (strain atcc 204508 /s288c) | Bailey, L.J., Kossiakoff, A.A. | 1.701 | X-RAY DIFFRACTION | 0.207 | 0.154 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
1kxt | F | null | 0 | E | protein | null | alpha-amylase, pancreatic | HYDROLASE, IMMUNE SYSTEM | 02/01/02 | Camelid VHH Domains in Complex with Porcine Pancreatic alpha-Amylase | CAMELUS DROMEDARIUS; SUS SCROFA | camelus dromedarius | null | sus scrofa | Desmyter, A., Spinelli, S., Payan, F., Lauwereys, M., Wyns, L., Muyldermans, S., Cambillau, C. | 2.0 | X-RAY DIFFRACTION | 0.236 | 0.203 | false | true | IGHV1 | null | null | 0 | -9.04 | SPR | null | 11960990 |
1otu | E | F | 0 | B | protein | null | voltage-gated clc-type chloride channel eric | MEMBRANE PROTEIN | 03/23/03 | Structure of the Escherichia coli ClC Chloride channel E148Q mutant and Fab Complex | ESCHERICHIA COLI; MUS MUSCULUS | mus musculus | mus musculus | escherichia coli | Dutzler, R., Campbell, E.B., MacKinnon, R. | 3.3 | X-RAY DIFFRACTION | 0.325 | 0.294 | false | false | IGHV4 | IGKV4 | Kappa | null | null | null | null | null |
6xmi | E | D | 0 | F | peptide | null | terminase, large subunit | VIRAL PROTEIN, IMMUNE SYSTEM | 06/30/20 | Structure of Fab4 bound to P22 TerL(1-33) | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | salmonella phage p22 | Cingolani, G., Lokareddy, R., Ko, Y. | 1.51 | X-RAY DIFFRACTION | 0.203 | 0.167 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7rso | G | J | 0 | C | protein | null | amc016 gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/11/21 | AMC016 SOSIP.v4.2 in complex with PGV04 Fab | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Bader, D.L.V., Cottrell, C.A., Ward, A.B. | 4.1 | ELECTRON MICROSCOPY | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null |
4m5y | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 08/08/13 | Crystal structure of broadly neutralizing Fab 5J8 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Lee, P.S., Wilson, I.A. | 1.55 | X-RAY DIFFRACTION | 0.186 | 0.172 | false | true | IGHV4 | IGLV3 | Lambda | null | null | null | null | null |
7wpf | Z | null | 0 | null | null | null | null | VIRAL PROTEIN | 01/23/22 | SARS-CoV-2 Omicron Variant S Trimer complexed with three JMB2002 Fab | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS; LAMA GLAMA | lama glama | null | null | Yin, W., Xu, Y., Xu, P., Cao, X., Wu, C., Gu, C., He, X., Wang, X., Huang, S., Yuan, Q., Wu, K., Hu, W., Huang, Z., Liu, J., Wang, Z., Jia, F., Xia, K., Liu, P., Wang, X., Song, B., Zheng, J., Jiang, H., Cheng, X., Jiang, Y., Deng, S.J., Xu, H.E. | 2.92 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
7e7y | C | D | 0 | E | protein | null | spike protein s1 | VIRAL PROTEIN | 02/28/21 | Crystal structure of the SARS-CoV-2 S RBD in complex with BD-623 Fab | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Wei, Y., Xiao, J. | 2.41 | X-RAY DIFFRACTION | 0.241 | 0.197 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
1r3k | B | A | 0 | C | protein | null | voltage-gated potassium channel | MEMBRANE PROTEIN | 10/02/03 | potassium channel KcsA-Fab complex in low concentration of Tl+ | STREPTOMYCES LIVIDANS; MUS MUSCULUS | mus musculus | mus musculus | streptomyces lividans | Zhou, Y., MacKinnon, R. | 2.8 | X-RAY DIFFRACTION | 0.273 | 0.238 | false | false | IGHV1 | IGKV5 | Kappa | null | null | null | null | null |
3kym | L | K | 0 | null | null | null | null | IMMUNE SYSTEM | 12/06/09 | Crystal structure of Li33 IgG2 di-Fab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Silvian, L.F., Pepinsky, R.B., Walus, L. | 2.62 | X-RAY DIFFRACTION | 0.339 | 0.259 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
2ez0 | C | D | 0 | A | protein | null | h(+)/cl(-) exchange transporter clca | MEMBRANE PROTEIN | 11/10/05 | Crystal structure of the S107A/E148Q/Y445A mutant of EcClC, in complex with a FaB fragment | ESCHERICHIA COLI; MUS MUSCULUS | mus musculus | mus musculus | escherichia coli | Lobet, S., Dutzler, R. | 3.54 | X-RAY DIFFRACTION | 0.296 | 0.258 | false | false | IGHV4 | IGKV4 | Kappa | null | null | null | null | null |
6u0l | I | J | 0 | B | protein | null | envelope glycoprotein gp160 | VIRAL PROTEIN | 08/14/19 | Asymmetrically open conformational state (Class I) of HIV-1 Env trimer BG505 SOSIP.664 in complex with sCD4 and E51 Fab | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Yang, Z., Bjorkman, P.J. | 3.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
4nrz | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 11/27/13 | Crystal Structure of HIV-1 Neutralizing Antibody m66.6 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Ofek, G., Yang, Y., Kwong, P.D. | 2.42 | X-RAY DIFFRACTION | 0.216 | 0.177 | false | true | IGHV5 | IGKV1 | Kappa | null | null | null | null | null |
6ca6 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 01/29/18 | Crystal structure of PCT64_35S, a broadly neutralizing anti-HIV antibody. | HOMO SAPIENS | homo sapiens | homo sapiens | null | Murrell, S., Wilson, I.A. | 2.43 | X-RAY DIFFRACTION | 0.245 | 0.201 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
3q3g | D | C | 0 | G | protein | null | integrin alpha-m | IMMUNE SYSTEM/CELL ADHESION | 12/21/10 | Crystal Structure of A-domain in complex with antibody | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Mahalingam, B., Xiong, J.P., Arnaout, M.A. | 2.7 | X-RAY DIFFRACTION | 0.244 | 0.211 | false | false | IGHV14 | IGKV8 | Kappa | 0 | -11.32 | SPR | 25 | 22095715 |
4jzj | A | B | 0 | D | protein | null | interleukin-3 receptor subunit alpha | CYTOKINE RECEPTOR/IMMUNE SYSTEM | 04/03/13 | Crystal Structure of Receptor-Fab Complex | HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | Broughton, S.E., Parker, M.W. | 2.801 | X-RAY DIFFRACTION | 0.244 | 0.185 | false | false | IGHV5 | IGKV4 | Kappa | 0 | -11.45684 | SPR | null | TBD |
7l0n | C | D | 0 | S | protein | null | spike protein s1 | VIRAL PROTEIN/HYDROLASE | 12/11/20 | Circulating SARS-CoV-2 spike N439K variants maintain fitness while evading antibody-mediated immunity | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Snell, G., Czudnochowski, N., Dillen, J., Nix, J.C., Croll, T.I., Corti, D. | 2.78 | X-RAY DIFFRACTION | 0.325 | 0.290 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
5w4l | B | C | 0 | A | protein | null | clade a/e 93th057 hiv-1 gp120 core | VIRAL PROTEIN/IMMUNE SYSTEM | 06/12/17 | Crystal structure of the non-neutralizing and ADCC-potent C11-like antibody N12-i3 in complex with HIV-1 clade A/E gp120, the CD4 mimetic M48U1, and the antibody N5-i5. | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Tolbert, W.D., Gohain, N., Pazgier, M. | 2.92 | X-RAY DIFFRACTION | 0.292 | 0.231 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
7r4q | D | null | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 02/09/22 | The SARS-CoV-2 spike in complex with the 1.29 neutralizing nanobody | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; CAMELUS DROMEDARIUS | camelus dromedarius | null | severe acute respiratory syndrome coronavirus2 | Casasnovas, J.M., Melero, R., Arranz, R., Fernandez, L.A. | 3.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
6vja | H | L | 0 | C | protein | null | b-lymphocyte antigen cd20 | IMMUNE SYSTEM | 01/15/20 | Structure of CD20 in complex with rituximab Fab | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Rohou, A., Croll, T.I. | 3.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
7kfv | H | L | 0 | A | protein | null | surface glycoprotein | IMMUNE SYSTEM/Viral protein | 10/15/20 | Structural basis for a germline-biased antibody response to SARS-CoV-2 (RBD:C1A-B12 Fab) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Pan, J., Abraham, J., Clark, L., Clark, S. | 2.102 | X-RAY DIFFRACTION | 0.216 | 0.183 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6wg1 | H | L | 0 | C | peptide | null | npna6 peptide | IMMUNE SYSTEM | 04/04/20 | Crystal structure of Fab399 in complex with NPNA6 peptide from circumsporozoite protein | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | plasmodium falciparum | Pholcharee, T., Oyen, D., Wilson, I.A. | 2.086 | X-RAY DIFFRACTION | 0.246 | 0.197 | false | true | IGHV3 | IGKV2 | Kappa | null | null | null | null | null |
6ii9 | M | N | 0 | C | protein | null | hemagglutinin | IMMUNE SYSTEM | 10/03/18 | Crystal structure of H7 hemagglutinin from A/Anhui/1/2013 in complex with a human neutralizing antibody L3A-44 | INFLUENZA A VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus | Jiang, H.H., Shi, Y., Qi, J., Gao, G.F. | 3.5 | X-RAY DIFFRACTION | 0.234 | 0.201 | false | true | IGHV4 | IGLV1 | Lambda | 0 | -10.521321 | SPR | null | TBD |
1wc7 | B | A | 0 | A | Hapten | PP3 | ALANYL-PYRIDOXAL-5'-PHOSPHATE | ANTIBODY | 11/09/04 | FAB FRAGMENT OF PLP-DEPENDENT CATALYTIC ANTIBODY 15A9 IN COMPLEX WITH PHOSPHOPYRIDOXYL-L-ALANINE | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | PIMPANEAU, B.GOLINELLI-, CHRISTEN, P. | 2.33 | X-RAY DIFFRACTION | unknown | unknown | false | true | IGHV7 | IGKV4 | Kappa | null | null | null | null | null |
6o2a | A | B | 0 | F | peptide | null | circumsporozoite protein | IMMUNE SYSTEM | 02/22/19 | Crystal structure of 4493 Fab in complex with circumsporozoite protein NDN and anti-kappa VHH domain | HOMO SAPIENS; LAMA GLAMA; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | plasmodium falciparum | Scally, S.W., Bosch, A., Prieto, K., Murugan, R., Wardemann, H., Julien, J.P. | 2.15 | X-RAY DIFFRACTION | 0.221 | 0.193 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
2vyr | K | null | 0 | null | null | null | null | IMMUNE SYSTEM | 07/28/08 | Structure of human MDM4 N-terminal domain bound to a single domain antibody | HOMO SAPIENS | homo sapiens | null | null | Yu, G.W., Vaysburd, M., Allen, M.D., Settanni, G., Fersht, A.R. | 2.0 | X-RAY DIFFRACTION | 0.248 | 0.207 | false | true | IGHV3 | null | null | 0 | -9.69 | ITC | 15 | 19084022 |
6zwk | C | null | 0 | I | peptide | null | histone h2ax | IMMUNE SYSTEM | 07/28/20 | Crystal structure of the phosphorylated C-terminal tail of histone H2AX in complex with a specific nanobody (C6 gammaXbody) | VICUGNA PACOS; SYNTHETIC CONSTRUCT | vicugna pacos | null | homo sapiens | McEwen, A.G., Moeglin, E., Desplancq, D., Weiss, E., Poterszman, A. | 1.55 | X-RAY DIFFRACTION | 0.184 | 0.149 | false | true | IGHV1 | null | null | null | null | null | null | null |
1lo3 | H | L | 0 | H | Hapten | AN1 | 3-(10-METHYL-ANTHRACEN-9-YL)-PROPIONIC ACID | IMMUNE SYSTEM | 05/06/02 | Retro-Diels-Alderase Catalytic Antibody: Product Analogue | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Hugot, M., Reymond, J.L., Baumann, U. | 2.3 | X-RAY DIFFRACTION | 0.259 | 0.208 | false | false | IGHV5 | IGKV1 | Kappa | null | null | null | null | null |
4xbp | C | D | 0 | null | null | null | null | IMMUNE SYSTEM | 12/17/14 | Crystal structure of human 4E10 Fab crystalized in the presence of Phosphatidylethanolamine (06:0 PE) | HOMO SAPIENS | homo sapiens | homo sapiens | null | Irimia, A., Stanfield, R.L., Wilson, I.A. | 2.94 | X-RAY DIFFRACTION | 0.271 | 0.228 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
7wr8 | A | B | 0 | R | protein | null | spike protein s1 | VIRAL PROTEIN | 01/26/22 | Local CryoEM structure of the SARS-CoV-2 S6P(B.1.1.529) in complex with BD55-3152 Fab | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Du, S., Xiao, J.Y. | 0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV3 | Lambda | null | null | null | null | null |
2dqu | H | L | 0 | H | Hapten | CPD | [1-(3-DIMETHYLAMINO-PROPYL)-3-ETHYL-UREIDO]-[4-(2,2,2-TRIFLUORO-ACETYLAMINO)-BENZYL]PHOSPHINIC ACID-2-(2,2-DIHYDRO-ACETYLAMINO)-3-HYDROXY-1-(4-NITROPHENYL)-PROPYL ESTER | IMMUNE SYSTEM | 05/30/06 | Crystal form II: high resolution crystal structure of the complex of the hydrolytic antibody Fab 6D9 and a transition-state analog | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Kristensen, O., Vassylyev, D.G., Tanaka, F., Ito, N., Morikawa, K., Fujii, I. | 1.7 | X-RAY DIFFRACTION | 0.246 | 0.207 | false | false | IGHV5 | IGKV1 | Kappa | null | null | null | null | null |
1z3g | I | M | 0 | B | protein | null | ookinete surface protein pvs25 | IMMUNE SYSTEM/CELL ADHESION | 03/12/05 | Crystal structure of complex between Pvs25 and Fab fragment of malaria transmission blocking antibody 2A8 | MUS MUSCULUS; PLASMODIUM VIVAX SAI-1 | mus musculus | mus musculus | plasmodium vivax sai-1 | Saxena, A.K., Singh, K., Su, H.P., Klein, M.M., Stowers, A.W., Saul, A.J., Long, C.A., Garboczi, D.N. | 3.3 | X-RAY DIFFRACTION | 0.327 | 0.272 | false | true | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
5xqy | null | E | 0 | null | null | null | null | IMMUNE SYSTEM | 06/07/17 | Structure of monomeric mutant of REI immunoglobulin light chain variable domain crystallized at pH 8 | HOMO SAPIENS | null | homo sapiens | null | Mine, S., Nakamura, T., Uegaki, K., Hamada, D. | 2.9 | X-RAY DIFFRACTION | 0.285 | 0.231 | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
3j70 | R | S | 0 | U | protein | null | envelope glycoprotein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 04/22/14 | Model of gp120, including variable regions, in complex with CD4 and 17b | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Rasheed, M., Bettadapura, R., Bajaj, C. | NOT | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6xq4 | E | F | 0 | D | protein | null | hemagglutinin | VIRAL PROTEIN/IMMUNE SYSTEM | 07/09/20 | Human antibody S8V2-47 in complex with the influenza hemagglutinin head domain of A/Beijing/262/1995(H1N1) | INFLUENZA A VIRUS (A/BEIJING/262/1995(H1N1)); HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus (a/beijing/262/1995(h1n1)) | McCarthy, K.R., Harrison, S.C. | 3.347 | X-RAY DIFFRACTION | 0.279 | 0.238 | false | true | IGHV3 | IGKV4 | Kappa | null | null | null | null | null |
5kvf | H | L | 0 | E | protein | null | zika envelope diii | VIRAL PROTEIN/IMMUNE SYSTEM | 07/14/16 | Zika specific antibody, ZV-64, bound to ZIKA envelope DIII | ZIKA VIRUS; MUS MUSCULUS | mus musculus | mus musculus | zika virus | Zhao, H., Nelson, C.A., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID) | 1.4 | X-RAY DIFFRACTION | 0.187 | 0.154 | false | false | IGHV1 | IGKV8 | Kappa | 0 | -10.224805 | SPR | null | TBD |
6fys | B | null | 0 | null | null | null | null | VIRAL PROTEIN | 03/12/18 | Structure of single domain antibody SD83 | LAMA GLAMA | lama glama | null | null | Laursen, N.S., Wilson, I.A. | 2.0 | X-RAY DIFFRACTION | 0.231 | 0.201 | false | true | IGHV1 | null | null | null | null | null | null | null |
1dql | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 01/04/00 | CRYSTAL STRUCTURE OF AN UNLIGANDED (NATIVE) FV FROM A HUMAN IGM ANTI-PEPTIDE ANTIBODY | HOMO SAPIENS | homo sapiens | homo sapiens | null | Ramsland, P.A., Shan, L., Moomaw, C.R., Slaughter, C.A., Guddat, L.W., Edmundson, A.B. | 2.6 | X-RAY DIFFRACTION | 0.261 | 0.181 | false | false | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
1igy | D | C | 0 | null | null | null | null | IMMUNOGLOBULIN | 10/09/97 | STRUCTURE OF IMMUNOGLOBULIN | MUS MUSCULUS | mus musculus | mus musculus | null | Harris, L.J., McPherson, A. | 3.2 | X-RAY DIFFRACTION | 0.327 | 0.211 | false | false | IGHV1 | IGKV6 | Kappa | null | null | null | null | null |
7qn8 | L | null | 0 | C | protein | null | gamma-aminobutyric acid receptor subunit beta-3 | MEMBRANE PROTEIN | 12/20/21 | Cryo-EM structure of human full-length beta3delta GABA(A)R in complex with histamine and nanobody Nb25 | HOMO SAPIENS | homo sapiens | null | homo sapiens | Sente, A., Desai, R., Naydenova, K., Malinauskas, T., Jounaidi, Y., Miehling, J., Zhou, X., Masiulis, S., Hardwick, S.W., Chirgadze, D.Y., Miller, K.W., Aricescu, A.R. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
7jv4 | H | L | 0 | A | protein | null | sars-cov-2 spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 08/20/20 | SARS-CoV-2 spike in complex with the S2H13 neutralizing antibody (one RBD open) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Park, Y.J., Tortorici, M.A., Walls, A.C., Czudnochowski, N., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G., Veesler, D. | 3.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV7 | Lambda | null | null | null | null | null |
4kfz | D | null | 0 | B | protein | null | lmo-2 | TRANSCRIPTION | 04/28/13 | Crystal structure of LMO2 and anti-LMO2 VH complex | HOMO SAPIENS | homo sapiens | null | homo sapiens | Sewell, H., Tanaka, T., El Omari, K., Cruz-Migoni, A., Mancini, E.J., Fuentes-Fernandez, N., Chambers, J., Rabbitts, T.H. | 2.8 | X-RAY DIFFRACTION | 0.258 | 0.239 | false | true | IGHV3 | null | null | 0 | -9.586369 | Unknown | null | TBD |
4gw4 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 08/31/12 | Crystal structure of 3BNC60 Fab with P61A mutation | HOMO SAPIENS | homo sapiens | homo sapiens | null | Diskin, R., Fu, B.Z., Bjorkman, P.J. | 2.65 | X-RAY DIFFRACTION | 0.256 | 0.213 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6mph | H | L | 0 | D | protein | null | envelope glycoprotein gp41 | VIRAL PROTEIN | 10/06/18 | Cryo-EM structure at 3.8 A resolution of HIV-1 fusion peptide-directed antibody, DF1W-a.01, elicited by vaccination of Rhesus macaques, in complex with stabilized HIV-1 Env BG505 DS-SOSIP, which was also bound to antibodies VRC03 and PGT122 | MACACA MULATTA; HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | Acharya, P., Xu, K., Kwong, P.D. | 3.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV2 | Kappa | null | null | null | null | null |
6o3g | E | F | 0 | G | peptide | null | meper peptide, region 671-683 of hiv-1 gp41 | IMMUNE SYSTEM | 02/26/19 | Crystal structure of the Fab fragment of the human HIV-1 neutralizing antibody PGZL1 in complex with its MPER peptide epitope (region 671-683 of HIV-1 gp41). | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Irimia, A., Wilson, I.A. | 3.645 | X-RAY DIFFRACTION | 0.289 | 0.260 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
7qu2 | A | B | 0 | C | protein | null | glycoprotein g1 | IMMUNE SYSTEM | 01/17/22 | Junin virus GP1 glycoprotein in complex with Fab fragment of antibody JUN1 | MUS MUSCULUS; ARGENTINIAN MAMMARENAVIRUS | mus musculus | mus musculus | argentinian mammarenavirus | Ng, W.M., Sahin, M., Krumm, S.A., Seow, J., Zeltina, A., Harlos, K., Paesen, G., Pinschewer, D.D., Doores, K.J., Bowden, T.A. | 2.5 | X-RAY DIFFRACTION | 0.254 | 0.223 | false | true | IGHV13 | IGKV6 | Kappa | null | null | null | null | null |
5ktz | 7 | null | 0 | 3 | protein | null | genome polyprotein | VIRUS/immune system | 07/12/16 | expanded poliovirus in complex with VHH 12B | CAMELUS DROMEDARIUS; POLIOVIRUS TYPE 1; POLIOVIRUS TYPE 1 (STRAIN MAHONEY) | camelus dromedarius | null | poliovirus type 1 | Strauss, M., Schotte, L., Filman, D.J., Hogle, J.M. | 4.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
6fxn | H | I | 0 | C | protein | null | tumor necrosis factor ligand superfamily member 13b | IMMUNE SYSTEM | 03/09/18 | Crystal structure of human BAFF in complex with Fab fragment of anti-BAFF antibody belimumab | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Lammens, A., Maskos, K., Willen, L., Jiang, X., Schneider, P. | 2.9 | X-RAY DIFFRACTION | 0.231 | 0.191 | false | true | IGHV1 | IGLV3 | Lambda | null | null | null | null | null |
5w9o | H | I | 0 | G | protein | null | spike glycoprotein | VIRAL PROTEIN | 06/23/17 | MERS S ectodomain trimer in complex with variable domain of neutralizing antibody G4 | MIDDLE EAST RESPIRATORY SYNDROME-RELATED CORONAVIRUS; MUS MUSCULUS | mus musculus | mus musculus | middle east respiratory syndrome-relatedcoronavirus | Pallesen, J., Ward, A.B. | 4.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
4wff | E | D | 0 | A | protein | null | potassium channel subfamily k member 4 | METAL TRANSPORT | 09/15/14 | Human TRAAK K+ channel in a K+ bound nonconductive conformation | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Brohawn, S.G., MacKinnon, R. | 2.5 | X-RAY DIFFRACTION | 0.245 | 0.213 | false | true | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
7kxj | J | N | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN/Immune System | 12/04/20 | SARS-CoV-2 spike protein in complex with Fab 15033-7, 3-""up"", asymmetric | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Li, Z., Rini, J. | 6.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
3upa | null | A | 0 | null | null | null | null | IMMUNE SYSTEM | 11/17/11 | A general strategy for the generation of human antibody variable domains with increased aggregation resistance | HOMO SAPIENS | null | homo sapiens | null | Dudgeon, K., Rouet, R., Kokmeijer, I., Langley, D.B., Christ, D. | 1.8 | X-RAY DIFFRACTION | 0.283 | 0.229 | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
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