pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 354
values | r_factor stringclasses 342
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
6q1k | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 08/05/19 | Inferred intermediate I-7 of the human antibody lineage 652 | HOMO SAPIENS | homo sapiens | homo sapiens | null | McCarthy, K.R., Harrison, S.C. | 2.2 | X-RAY DIFFRACTION | 0.239 | 0.191 | false | true | IGHV4 | IGLV3 | Lambda | null | null | null | null | null |
6nha | H | L | 0 | A | B | protein | protein | NA | NA | igg receptor fcrn large subunit p51 | beta-2-microglobulin | IMMUNE SYSTEM | 12/21/18 | Crystal structure of SYNT001, a human FcRn blocking monoclonal antibody | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | homo sapiens | Blumberg, R.S., Cheung, J., Mahmood, A., Gandhi, A.K. | 2.381 | X-RAY DIFFRACTION | 0.245 | 0.190 | false | true | IGHV1 | IGKV13 | Kappa | null | null | null | null | null |
7u2d | H | L | 0 | A | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 02/23/22 | Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody ADG20 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhu, X., Yuan, M., Wilson, I.A. | 2.76 | X-RAY DIFFRACTION | 0.259 | 0.220 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
6pi7 | F | E | 0 | D | protein | null | tudor and kh domain-containing protein | PROTEIN BINDING | 06/26/19 | Crystal structure of the TDRD2 extended Tudor domain in complex with an antibody fragment and the PIWIL1 peptide | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | homo sapiens | Liu, K., Min, J.R., Structural Genomics Consortium (SGC) | 2.8 | X-RAY DIFFRACTION | 0.206 | 0.190 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6k2i | A | null | 9 | null | null | null | null | AFB1-BINDING PROTEIN | 05/14/19 | Solution structure of camelid nanobody Nb11 against aflatoxin B1 | VICUGNA PACOS | vicugna pacos | null | null | Nie, Y., Li, S.L., He, T., Zhu, J., Yang, Y.H. | NOT | SOLUTION NMR | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
4ios | F | null | 0 | C | protein | null | bpp | VIRAL PROTEIN | 01/08/13 | Structure of phage TP901-1 RBP (ORF49) in complex with nanobody 11. | LACTOCOCCUS PHAGE TP901-1; LAMA GLAMA | lama glama | null | lactococcus phage tp901-1 | Desmyter, A., Farenc, C., Mahony, J., Spinelli, S., Bebeacua, C., Blangy, S., Veesler, D., van Sinderen, D., Cambillau, C. | 2.4 | X-RAY DIFFRACTION | 0.227 | 0.201 | false | true | IGHV1 | null | null | null | null | null | null | null |
7mkm | H | L | 0 | A | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 04/24/21 | SARS-CoV-2 Spike RBD in complex with neutralizing Fab SARS2-38 (local refinement) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS | mus musculus | mus musculus | severe acute respiratory syndrome coronavirus2 | Adams, L.J., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID) | 3.16 | ELECTRON MICROSCOPY | null | null | false | false | IGHV2 | IGKV4 | Kappa | null | null | null | null | null |
7zff | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 04/01/22 | Omi-42 Fab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Zhou, D., Huo, J., Ren, J., Stuart, D.I. | 2.32 | X-RAY DIFFRACTION | 0.269 | 0.231 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
6b3k | H | L | 0 | R | nucleic-acid | null | rna (83-mer),rna (83-mer) | Immuny system/RNA | 09/22/17 | Spinach RNA aptamer_AGACC mutant-Fab BL3-6 complex | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | synthetic construct | DasGupta, S., Koirala, D., Shelke, S.A., Piccirilli, J.A. | 2.09 | X-RAY DIFFRACTION | 0.226 | 0.193 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -9.441686 | Unknown | null | TBD |
4ygv | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 02/26/15 | Reversal Agent for Dabigatran | HOMO SAPIENS | homo sapiens | homo sapiens | null | Schiele, F., Nar, H. | 1.76 | X-RAY DIFFRACTION | 0.198 | 0.178 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
5aum | H | L | 0 | C | peptide | null | peptide renlyfqgkdg | IMMUNE SYSTEM/PEPTIDE | 04/30/15 | Crystal structure of a Fab fragment with the ligand peptide | RATTUS; SYNTHETIC CONSTRUCT | rattus | rattus | potyviridae | Kitago, Y., Takagi, J. | 2.05 | X-RAY DIFFRACTION | 0.221 | 0.189 | false | true | IGHV10 | IGKV2 | Kappa | null | null | null | null | null |
7tpg | H | L | 0 | B | protein | null | putative cell surface polysaccharide polymerase/ligase | MEMBRANE PROTEIN | 01/25/22 | Single-Particle Cryo-EM Structure of the WaaL O-antigen ligase in its ligand bound state | CUPRIAVIDUS METALLIDURANS; HOMO SAPIENS | homo sapiens | homo sapiens | cupriavidus metallidurans | Ashraf, K.U., Nygaard, R., Vickery, O.N., Erramilli, S.K., Herrera, C.M., McConville, T.H., Petrou, V.I., Giacometti, S.I., Dufrisne, M.B., Nosol, K., Zinkle, A.P., Graham, C.L.B., Loukeris, M., Kloss, B., Skorupinska-Tudek, K., Swiezewska, E., Roper, D., Clarke, O.B., Uhlemann, A.C., Kossiakoff, A.A., Trent, M.S., Sta... | 3.23 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5xs7 | H | L | 0 | A | protein | null | genome polyprotein | VIRUS | 06/12/17 | Structure of Coxsackievirus A6 (CVA6) virus A-particle in complex with the neutralizing antibody fragment 1D5 | MUS MUSCULUS; COXSACKIEVIRUS A6 | mus musculus | mus musculus | coxsackievirus a6 | Zheng, Q.B., He, M.Z., Xu, L.F., Yu, H., Li, S.W., Cheng, T. | 3.8 | ELECTRON MICROSCOPY | null | null | false | false | IGHV5 | IGKV6 | Kappa | null | null | null | null | null |
6xzf | B | null | 0 | A | protein | null | egfp | IMMUNE SYSTEM | 02/04/20 | Nanobody in complex with eGFP | LAMA GLAMA; AEQUOREA VICTORIA | lama glama | null | aequorea victoria | Pompidor, G., Zimmermann, S., Loew, C., Schneider, T. | 1.8 | X-RAY DIFFRACTION | 0.204 | 0.173 | false | true | IGHV1 | null | null | null | null | null | null | null |
7r4r | D | null | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN | 02/09/22 | The SARS-CoV-2 spike in complex with the 1.10 neutralizing nanobody | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; CAMELUS DROMEDARIUS | camelus dromedarius | null | severe acute respiratory syndrome coronavirus2 | Casasnovas, J.M., Melero, R., Arranz, R., Fernandez, L.A. | 3.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
5omn | C | null | 0 | B | protein | null | capsid protein | VIRAL PROTEIN | 08/01/17 | GII.10 Vietnam 026 protruding domain in complex with Nanobody Nano-27 | NORWALK VIRUS; VICUGNA PACOS | vicugna pacos | null | norwalk virus | Koromyslova, A.D., Hansman, G.S. | 2.682 | X-RAY DIFFRACTION | 0.263 | 0.235 | false | true | IGHV1 | null | null | 0 | -10.944343 | ITC | null | TBD |
5wtt | A | B | 0 | C | peptide | null | epitope peptide of cyr61 | PROTEIN BINDING | 12/14/16 | Structure of the 093G9 Fab in complex with the epitope peptide | HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | homo sapiens | homo sapiens | Zhong, C., Hu, K., Shen, J., Ding, J. | 2.7 | X-RAY DIFFRACTION | 0.274 | 0.222 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -9.006821 | Unknown | null | TBD |
5tud | C | B | 0 | A | protein | null | 5-hydroxytryptamine receptor 2b,soluble cytochrome b562chimera | SIGNALING PROTEIN | 11/05/16 | Structural Insights into the Extracellular Recognition of the Human Serotonin 2B Receptor by an Antibody | HOMO SAPIENS; ESCHERICHIA COLI; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens, escherichia coli | Ishchenko, A., Wacker, D., Kapoor, M., Zhang, A., Han, G.W., Basu, S., Boutet, S., James, D., Wang, D., Weierstall, U., Liu, W., Katritch, V., Stevens, R.C., Cherezov, V. | 3.0 | X-RAY DIFFRACTION | 0.247 | 0.227 | false | true | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
7dk4 | e | f | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN | 11/23/20 | S-2H2-F3a structure, two RBDs are up and one RBD is down, each RBD binds with a 2H2 Fab. | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS | mus musculus | mus musculus | severe acute respiratory syndrome coronavirus2 | Cong, Y., Wang, Y.F. | 3.8 | ELECTRON MICROSCOPY | null | null | false | false | IGHV2 | IGKV3 | Kappa | null | null | null | null | null |
6idk | I | J | 0 | E | protein | null | premembrane protein | VIRUS | 09/10/18 | Cryo-EM structure of Immature Dengue virus serotype 3 in complex with human antibody 1H10 Fab at pH 5.0 (Class I particle) | DENGUE VIRUS 3; HOMO SAPIENS | homo sapiens | homo sapiens | dengue virus 3 | Wirawan, M., Fibriansah, G., Ng, T.S., Zhang, Q., Kostyuchenko, V.A., Shi, J., Lok, S.M. | 25 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
5w9k | B | C | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 06/23/17 | MERS S ectodomain trimer in complex with variable domain of neutralizing antibody G4 | MIDDLE EAST RESPIRATORY SYNDROME-RELATED CORONAVIRUS; MUS MUSCULUS | mus musculus | mus musculus | middle east respiratory syndrome-relatedcoronavirus | Pallesen, J., Ward, A.B. | 4.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
4k3h | null | F | 0 | E | Hapten | 1OM | 4-{bis[4-(dimethylamino)phenyl]methyl}phenol | immune system/inhibitor | 04/10/13 | Immunoglobulin lambda variable domain L5(L89S) fluorogen activationg protein in complex with malachite green | HOMO SAPIENS | null | homo sapiens | homo sapiens | Stanfield, R.L., Szent-Gyorgyi, C., Wilson, I.A. | 2.45 | X-RAY DIFFRACTION | 0.225 | 0.194 | false | true | null | IGLV7 | Lambda | 0 | -9.350354 | Unknown | null | TBD |
4rgn | D | E | 0 | A | protein | null | enterotoxin type b | TOXIN/IMMUNE SYSTEM | 09/30/14 | Structure of Staphylococcal Enterotoxin B bound to two neutralizing antibodies, 14G8 and 6D3 | STAPHYLOCOCCUS AUREUS; MUS MUSCULUS | mus musculus | mus musculus | staphylococcus aureus | Franklin, M.C., Dutta, K., Varshney, A.K., Goger, M.J., Fries, B.C. | 2.698 | X-RAY DIFFRACTION | 0.278 | 0.240 | false | false | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
5xcv | A | B | 0 | C | peptide | null | pa14 peptide | IMMUNE SYSTEM | 03/23/17 | Crystal structure of NZ-1 Fv-clasp fragment with its antigen peptide | RATTUS; HOMO SAPIENS; SYNTHETIC CONSTRUCT | rattus, homo sapiens | rattus, homo sapiens | homo sapiens | Arimori, T., Takagi, J. | 2.143 | X-RAY DIFFRACTION | 0.277 | 0.228 | false | true | IGHV5 | IGLV3 | Lambda | null | null | null | null | null |
7kgv | C | E | 0 | B | protein | null | sodium-coupled neutral amino acid transporter 9 | TRANSPORT PROTEIN | 10/19/20 | Crystal structure of sodium-coupled neutral amino acid transporter SLC38A9 in the N-terminal plugged form | DANIO RERIO; MUS MUSCULUS | mus musculus | mus musculus | danio rerio | Lei, H., Mu, X., Hattne, J., Gonen, T. | 3.4 | X-RAY DIFFRACTION | 0.284 | 0.251 | false | false | unknown | unknown | unknown | null | null | null | null | null |
4dcq | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 01/18/12 | Crystal Structure of the Fab Fragment of 3B5H10, an Antibody-Specific for Extended Polyglutamine Repeats (orthorhombic form) | MUS MUSCULUS | mus musculus | mus musculus | null | Peters-Libeu, C.A., Tran, T., Finkbeiner, S., Weisgraber, K. | 1.94 | X-RAY DIFFRACTION | 0.246 | 0.185 | false | false | IGHV9 | IGLV3 | Lambda | null | null | null | null | null |
5kem | I | J | 0 | F | protein | null | ebola secreted glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 06/09/16 | EBOV sGP in complex with variable Fab domains of IgGs c13C6 and BDBV91 | HOMO SAPIENS; ZAIRE EBOLAVIRUS | homo sapiens | homo sapiens | zaire ebolavirus | Pallesen, J., Murin, C.D., de Val, N., Cottrell, C.A., Hastie, K.M., Turner, H.L., Fusco, M.L., Flyak, A.I., Zeitlin, L., Crowe Jr., J.E., Andersen, K.G., Saphire, E.O., Ward, A.B. | 5.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV8 | IGKV6 | Kappa | null | null | null | null | null |
6lz2 | D | null | 0 | C | protein | null | thermostable green fluorescent protein | FLUORESCENT PROTEIN | 02/17/20 | Crystal structure of a thermostable green fluorescent protein (TGP) with a synthetic nanobody (Sb44) | GALAXEA FASCICULARIS; LAMA GLAMA | lama glama | null | galaxea fascicularis | Cai, H., Yao, H., Li, T., Hutter, C., Tang, Y., Li, Y., Seeger, M., Li, D. | 2.03 | X-RAY DIFFRACTION | 0.215 | 0.175 | false | true | IGHV1 | null | null | null | null | null | null | null |
4rav | A | B | 0 | E | peptide | null | huntingtin | IMMUNE SYSTEM/Apoptosis | 09/11/14 | Crystal structure of scFvC4 in complex with the first 17 AA of huntingtin | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | homo sapiens | De Genst, E., Chirgadze, D.Y., Dobson, C.M. | 2.5 | X-RAY DIFFRACTION | 0.226 | 0.180 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
4xvu | I | J | 0 | H | protein | null | atpase get3 | HYDROLASE/TRANSPORT PROTEIN | 01/28/15 | Structure of Get3 bound to the transmembrane domain of Nyv1 | SACCHAROMYCES CEREVISIAE (ATCC 204508 / S288C); SACCHAROMYCES CEREVISIAE; HOMO SAPIENS, SYNTHETIC CONSTRUCT | homo sapiens, synthetic construct | homo sapiens, synthetic construct | saccharomyces cerevisiae (atcc 204508 / s288c) | Mateja, A., Paduch, M., Chang, H.-Y., Szydlowska, A., Kossiakoff, A.A., Hegde, R.S., Keenan, R.J. | 2.35 | X-RAY DIFFRACTION | 0.234 | 0.197 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
2ymx | H | L | 0 | null | null | null | null | null | 10/10/12 | Crystal structure of inhibitory anti-AChE Fab408 | MUS MUSCULUS | mus musculus | mus musculus | null | Bourne, Y., Renault, L., Essono, S., Mondielli, G., Lamourette, P., Bocquet, D., Grassi, J., Marchot, P. | 1.9 | X-RAY DIFFRACTION | 0.25353 | 0.20845 | false | false | IGHV1 | IGKV12 | Kappa | null | null | null | null | null |
2hff | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 06/23/06 | Crystal structure of CB2 Fab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Hymowitz, S.G. | 1.95 | X-RAY DIFFRACTION | 0.221 | 0.189 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
3gi8 | H | L | 0 | C | protein | null | uncharacterized protein mj0609 | TRANSPORT PROTEIN | 03/05/09 | Crystal Structure of ApcT K158A Transporter Bound to 7F11 Monoclonal Fab Fragment | METHANOCALDOCOCCUS JANNASCHII; MUS MUSCULUS | mus musculus | mus musculus | methanocaldococcus jannaschii | Shaffer, P.L., Goehring, A.S., Shankaranarayanan, A., Gouaux, E., New York Consortium on Membrane Protein Structure (NYCOMPS) | 2.59 | X-RAY DIFFRACTION | 0.307 | 0.254 | false | true | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
5uby | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 12/21/16 | Fab structure of anti-HIV-1 gp120 mAb 1A8 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Pan, R., Kong, X.-P. | 2.6 | X-RAY DIFFRACTION | 0.249 | 0.188 | false | true | IGHV4 | IGLV3 | Lambda | null | null | null | null | null |
6uyd | H | L | 0 | E | protein | null | envelope glycoprotein e2 | VIRAL PROTEIN/IMMUNE SYSTEM | 11/13/19 | Structure of Hepatitis C Virus Envelope Glycoprotein E2mc3-v1 redesigned core from genotype 1a bound to broadly neutralizing antibody AR3C | HEPATITIS C VIRUS (ISOLATE H); HOMO SAPIENS | homo sapiens | homo sapiens | hepatitis c virus (isolate h) | Tzarum, N., Wilson, I.A., Zhu, J. | 1.897 | X-RAY DIFFRACTION | 0.243 | 0.208 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
5lhr | B | null | 0 | A | protein | null | urokinase-type plasminogen activator | HYDROLASE | 07/12/16 | The catalytic domain of murine urokinase-type plasminogen activator in complex with the active site binding inhibitory nanobody Nb22 | MUS MUSCULUS; VICUGNA PACOS | vicugna pacos | null | mus musculus | Kromann-Hansen, T., Lange, E.L., Sorensen, H.P., Ghassabeh, G.H., Huang, M., Jensen, J.K., Muyldermans, S., Declerck, P.J., Andreasen, P.A. | 2.3 | X-RAY DIFFRACTION | 0.243 | 0.188 | false | true | IGHV1 | null | null | null | null | null | null | null |
1a7r | H | L | 0 | null | null | null | null | IMMUNOGLOBULIN | 03/16/98 | FV FRAGMENT OF MOUSE MONOCLONAL ANTIBODY D1.3 (BALB/C, IGG1, K) VARIANT CHAIN L GLU81->ASP | MUS MUSCULUS | mus musculus | mus musculus | null | Marks, C., Henrick, K., Winter, G. | 2.01 | X-RAY DIFFRACTION | unknown | 0.170 | false | true | IGHV2 | IGKV12 | Kappa | null | null | null | null | null |
5u15 | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 11/27/16 | Crystal Structure of DH270.UCA3 (unliganded) from the DH270 Broadly Neutralizing N332-glycan Dependent Lineage | HOMO SAPIENS | homo sapiens | homo sapiens | null | Fera, D., Harrison, S.C. | 2.26 | X-RAY DIFFRACTION | 0.255 | 0.216 | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null |
5bk2 | H | L | 0 | A | protein | null | maltose-binding periplasmic protein | SUGAR BINDING PROTEIN | 09/12/17 | Crystal structure of maltose binding protein in complex with a peristeric synthetic antibody | ESCHERICHIA COLI; HOMO SAPIENS | homo sapiens | homo sapiens | escherichia coli | Mukherjee, S., Kossiakoff, A.A. | 2.6 | X-RAY DIFFRACTION | 0.259 | 0.212 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6bzu | A | B | 0 | J | peptide | null | e2 as412 peptide | IMMUNE SYSTEM | 12/26/17 | Structure of the Hepatitis C virus envelope glycoprotein E2 antigenic region 412-423 bound to the broadly neutralizing antibody 19B3 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | hepatitis c virus | Tzarum, N., Alemn, F., Kong, L., Wilson, I.A., Law, M. | 2.7 | X-RAY DIFFRACTION | 0.290 | 0.265 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
1bjm | null | B | 0 | null | null | null | null | IMMUNOGLOBULIN | 05/26/95 | LOC NAKS, A LAMBDA 1 TYPE LIGHT-CHAIN DIMER (BENCE-JONES PROTEIN) CRYSTALLIZED IN NAKSO4 | HOMO SAPIENS | null | homo sapiens | null | Schiffer, M., Huang, D.B. | 2.2 | X-RAY DIFFRACTION | unknown | unknown | false | false | null | IGLV1 | Lambda | null | null | null | null | null |
7klg | H | L | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/Immune System | 10/30/20 | SARS-CoV-2 RBD in complex with Fab 15033 | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Li, Z., Rini, J.M. | 3.2 | X-RAY DIFFRACTION | 0.290 | 0.271 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7zmn | K | null | 0 | B | protein | null | atp-dependent dna helicase q5 | HYDROLASE | 04/19/22 | Crystal structure of human RECQL5 helicase APO form in complex with engineered nanobody (Gluebody) G3-048 | Homo sapiens; Lama glama | lama glama | null | homo sapiens | Ye, M., Makola, M., Newman, J.A., Fairhead, M., MacLean, E., Krojer, T., Aitkenhead, H., Bountra, C., Gileadi, O., von Delft, F. | 3.2 | X-RAY DIFFRACTION | 0.275 | 0.242 | false | true | IGHV1 | null | null | null | null | null | null | null |
6xw7 | C | null | 0 | A | protein | null | capsid protein | VIRAL PROTEIN | 01/23/20 | Crystal structure of murine norovirus P domain in complex with Nanobody NB-5829 and glycochenodeoxycholate (GCDCA) | MURINE NOROVIRUS 1; VICUGNA PACOS | vicugna pacos | null | murine norovirus 1 | Kilic, T., Sabin, C., Hansman, G. | 2.15 | X-RAY DIFFRACTION | 0.215 | 0.171 | false | true | IGHV1 | null | null | null | null | null | null | null |
7ndc | F | G | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN, IMMUNE SYSTEM | 01/30/21 | EM structure of SARS-CoV-2 Spike glycoprotein (all RBD down) in complex with COVOX-159 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Duyvesteyn, H.M.E., Zhao, Y., Ren, J., Stuart, D. | 4.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
4ebq | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 03/23/12 | Fab structure of anti-Vaccinia virus D8L antigen mouse IgG2a LA5 | MUS MUSCULUS | mus musculus | mus musculus | null | Matho, M.H., Zajonc, D.M. | 1.6 | X-RAY DIFFRACTION | 0.229 | 0.198 | false | true | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
7p7a | D | null | 0 | E | protein | null | spike glycoprotein | VIRAL PROTEIN | 07/19/21 | SARS-CoV-2 spike protein in complex with sybody#68 in a 2up/1flexible conformation | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; SYNTHETIC CONSTRUCT | synthetic construct | null | severe acute respiratory syndrome coronavirus2 | Walter, J.D., Hutter, C.A.J., Garaeva, A.A., Scherer, M., Zimmermann, I., Wyss, M., Rheinberger, J., Ruedin, Y., Earp, J.C., Egloff, P., Sorgenfrei, M., Huerlimann, L.M., Gonda, I., Meier, G., Remm, S., Thavarasah, S., Zimmer, G., Slotboom, D.J., Paulino, C., Plattet, P., Seeger, M.A. | 4.76 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
7qia | B | null | 0 | A | protein | null | divalent metal cation transporter | MEMBRANE PROTEIN | 12/14/21 | Structure of apo-EleNRMT in complex with two nanobodies at 3.5A | EGGERTHELLA LENTA; SYNTHETIC CONSTRUCT | synthetic construct | null | eggerthella lenta | Ramanadane, K., Straub, M.S., Dutzler, R., Manatschal, C. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
7e88 | A | B | 0 | C | protein | null | spike protein s1 | VIRAL PROTEIN,IMMUNE SYSTEM | 03/01/21 | Crystal structure of the SARS-CoV-2 S RBD in complex with BD-515 Fab | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Gao, C., Wei, Y., Xiao, J. | 3.14 | X-RAY DIFFRACTION | 0.255 | 0.217 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7so5 | H | L | 0 | A | protein | null | toxin b | TOXIN/IMMUNE SYSTEM | 10/29/21 | Novel structural insights for a pair of monoclonal antibodies recognizing non-overlapping epitopes of the glucosyltransferase domain of Clostridium difficile toxin B | HOMO SAPIENS; CLOSTRIDIOIDES DIFFICILE R20291 | homo sapiens | homo sapiens | clostridioides difficile r20291 | Liu, J. | 1.797 | X-RAY DIFFRACTION | 0.223 | 0.185 | false | true | IGHV4 | IGKV2 | Kappa | null | null | null | null | null |
6ot1 | H | L | 0 | B | protein | null | envelope glycoprotein gp41 | IMMUNE SYSTEM | 05/02/19 | Cryo-EM structure of vaccine-elicited antibody 0PV-b.01 in complex with HIV-1 Env BG505 DS-SOSIP and antibodies VRC03 and PGT122 | HUMAN IMMUNODEFICIENCY VIRUS 1; MACACA MULATTA; HOMO SAPIENS | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | Gorman, J., Kwong, P.D. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV2 | Kappa | null | null | null | null | null |
4h0h | B | b | 0 | D | peptide | null | peptide | IMMUNE SYSTEM | 09/08/12 | Crystal structure of mimicry-recognizing 2D10 scFv with peptide | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | null | null | Tapryal, S., Gaur, V., Kaur, K.J., Salunke, D.M. | 2.0 | X-RAY DIFFRACTION | 0.215 | 0.195 | true | true | unknown | unknown | unknown | null | null | null | null | null |
7qbe | E | null | 0 | A | protein | null | transcobalamin-2 | TRANSPORT PROTEIN | 11/19/21 | TC:CD320 in complex with nanobody TC-Nb11 | HOMO SAPIENS; VICUGNA PACOS | vicugna pacos | null | homo sapiens | Bloch, J.S., Locher, K.P. | 3.0 | X-RAY DIFFRACTION | 0.284 | 0.252 | false | true | IGHV1 | null | null | null | null | null | null | null |
7d8b | D | null | 0 | C | protein | null | eukaryotic translation initiation factor 4e | RNA BINDING PROTEIN | 10/07/20 | Engineering Disulphide-Free Autonomous Antibody VH Domains to modulate intracellular pathways | HOMO SAPIENS | homo sapiens | null | homo sapiens | Frosi, Y., Lin, Y.C., Jiang, S., Brown, C.J. | 2.46 | X-RAY DIFFRACTION | 0.292 | 0.250 | false | true | IGHV3 | null | null | null | null | null | null | null |
7s8h | H | L | 0 | a | protein | null | unknown | VIRAL PROTEIN/IMMUNE SYSTEM | 09/17/21 | Structure of Lassa virus glycoprotein bound to Fab 18.5C and Fab 36.1F | LASSA VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | lassa virus | Hastie, K.M., Enriquez, A.S. | 2.7 | X-RAY DIFFRACTION | 0.251 | 0.218 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
6wos | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 04/25/20 | Structure of broadly neutralizing antibody AR3B | HOMO SAPIENS | homo sapiens | homo sapiens | null | Tzarum, N., Wilson, I.A., Law, M. | 1.645 | X-RAY DIFFRACTION | 0.232 | 0.194 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
5tzu | H | L | 0 | C | protein | null | leukocyte surface antigen cd47 | IMMUNE SYSTEM | 11/22/16 | Crystal structure of human CD47 ECD bound to Fab of B6H12.2 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Cardoso, R.M.F. | 2.1 | X-RAY DIFFRACTION | 0.213 | 0.177 | false | true | IGHV5 | IGKV5 | Kappa | null | null | null | null | null |
5w9i | C | D | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 06/23/17 | MERS S ectodomain trimer in complex with variable domain of neutralizing antibody G4 | MIDDLE EAST RESPIRATORY SYNDROME-RELATED CORONAVIRUS; MUS MUSCULUS | mus musculus | mus musculus | middle east respiratory syndrome-relatedcoronavirus | Pallesen, J., Ward, A.B. | 3.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6kn9 | F | f | 0 | C | protein | null | interleukin-18 receptor accessory protein | CYTOKINE | 08/05/19 | Crystal structure of human interleukin 18 receptor beta extracellular domain in complex with an antagonistic scFv | HOMO SAPIENS | homo sapiens | null | homo sapiens | Wu, D.H., Liu, C.C. | 3.302 | X-RAY DIFFRACTION | 0.277 | 0.247 | true | true | unknown | unknown | unknown | null | null | null | null | null |
4zff | A | B | 0 | C | protein | null | vascular endothelial growth factor a | SIGNALING PROTEIN/IMMUNE SYSTEM | 04/21/15 | Dual-acting Fab 5A12 in complex with VEGF | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Harris, S.F., Wu, P. | 2.75 | X-RAY DIFFRACTION | 0.238 | 0.197 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -11.324631 | SPR | null | TBD |
6gff | N | M | 0 | J | G | H | protein | protein | protein | NA | NA | NA | leucine-rich repeat-containing protein 32 | transforming growth factor beta-1 | transforming growth factor beta-1 | IMMUNE SYSTEM | 04/30/18 | Structure of GARP (LRRC32) in complex with latent TGF-beta1 and MHG-8 Fab | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | homo sapiens | homo sapiens | Merceron, R., Lienart, S., Vanderaa, C., Colau, D., Stockis, J., Van Der Woning, B., De Haard, H., Saunders, M., Coulie, P.G., Savvides, S.N., Lucas, S. | 3.1 | X-RAY DIFFRACTION | 0.268 | 0.233 | false | false | IGHV2 | IGKV13 | Kappa | null | null | null | null | null |
1g9e | A | null | 4 | null | null | null | null | IMMUNE SYSTEM | 11/23/00 | SOLUTION STRUCTURE AND RELAXATION MEASUREMENTS OF AN ANTIGEN-FREE HEAVY CHAIN VARIABLE DOMAIN (VHH) FROM LLAMA | LAMA GLAMA | lama glama | null | null | Renisio, J.-G., Perez, J., Czisch, M., Guenneugues, M., Bornet, O., Frenken, L., Cambillau, C., Darbon, H. | NOT | SOLUTION NMR | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
7cjf | A | B | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN | 07/10/20 | Crystal structure of SARS-CoV-2 RBD in complex with a neutralizing antibody Fab | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Guo, Y., Li, X., Zhang, G., Fu, D., Schweizer, L., Zhang, H., Rao, Z. | 2.108 | X-RAY DIFFRACTION | 0.229 | 0.185 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7m8l | M | P | 0 | D | protein | null | virion spike glycoprotein 2 | VIRAL PROTEIN/IMMUNE SYSTEM | 03/30/21 | EBOV GP bound to rEBOV-442 and rEBOV-515 Fabs | EBOLA VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | ebola virus | Murin, C.D., Ward, A.B. | 3.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV3 | Kappa | null | null | null | null | null |
5jw4 | W | X | 0 | L | K | protein | protein | NA | NA | hemagglutinin | hemagglutinin | IMMUNE SYSTEM | 05/11/16 | Structure of MEDI8852 Fab Fragment in Complex with H5 HA | INFLUENZA A VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus | influenza a virus | Neu, U., Collins, P.J., Walker, P.A., Vorlaender, M.K., Ogrodowicz, R.W., Martin, S.R., Gamblin, S.J., Skehel, J.J. | 3.7 | X-RAY DIFFRACTION | 0.285 | 0.274 | false | true | IGHV6 | IGKV1 | Kappa | null | null | null | null | null |
4z7q | H | L | 0 | A | D | protein | protein | NA | NA | integrin alpha-iib | integrin beta-3 | MEMBRANE PROTEIN/IMMUNE SYSTEM | 04/07/15 | Integrin alphaIIbbeta3 in complex with AGDV-NH2 peptide | HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | homo sapiens | Lin, F.-Y., Zhu, J., Springer, T.A. | 2.7 | X-RAY DIFFRACTION | 0.236 | 0.188 | false | true | IGHV14 | IGKV14 | Kappa | null | null | null | null | null |
6b6z | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 12/19/18 | Crystal structure of the Apo Antibody fragment (Fab) raised against C-terminal domain of Ebola nucleoprotein (EBOV, TAFV, BDBV strains) | HOMO SAPIENS | homo sapiens | homo sapiens | null | Radwanska, M.J., Derewenda, U., Kossiakoff, A.A., Derewenda, Z.S. | 2.112 | X-RAY DIFFRACTION | 0.258 | 0.203 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6wzt | E | D | 0 | B | protein | null | hemagglutinin | ANTIVIRAL PROTEIN | 05/14/20 | CryoEM structure of influenza hemagglutinin A/Victoria/361/2011 in complex with cyno antibody 3B10 | INFLUENZA A VIRUS; MACACA FASCICULARIS | macaca fascicularis | macaca fascicularis | influenza a virus | Qiu, Y., Zhou, Y., Darricarrere, N. | 4.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
5m94 | D | null | 0 | C | protein | null | divalent metal cation transporter mnth | TRANSPORT PROTEIN | 10/31/16 | Crystal structure of Staphylococcus capitis divalent metal ion transporter (DMT) in complex with nanobody | STAPHYLOCOCCUS CAPITIS; LAMA GLAMA | lama glama | null | staphylococcus capitis | Dutzler, R., Ehrnstorfer, I.A. | 3.101 | X-RAY DIFFRACTION | 0.273 | 0.237 | false | true | IGHV1 | null | null | null | null | null | null | null |
6orq | H | L | 0 | G | protein | null | rc1 variant of hiv-1 env glycoprotein gp120 | VIRAL PROTEIN/Immune System | 04/30/19 | Modified BG505 SOSIP-based immunogen RC1 in complex with the elicited V3-glycan patch antibody Ab275MUR | HUMAN IMMUNODEFICIENCY VIRUS 1; MUS MUSCULUS | mus musculus | mus musculus | human immunodeficiency virus 1 | Abernathy, M.E., Gristick, H.B., Bjorkman, P.J. | 4.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV5 | IGKV3 | Kappa | null | null | null | null | null |
6p3s | V | W | 0 | X | protein | null | hemagglutinin | IMMUNE SYSTEM/VIRAL PROTEIN | 05/27/20 | Crystal structure of human Fab H5.28 in complex with influenza A H5N1 Vietnam hemagglutinin head domain | HOMO SAPIENS; INFLUENZA A VIRUS (A/CHICKEN/VIETNAM/32/2004(H5N1)) | homo sapiens | homo sapiens | influenza a virus(a/chicken/vietnam/32/2004(h5n1)) | Dong, J., Crowe, J.E. | 4.0 | X-RAY DIFFRACTION | 0.326 | 0.281 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5kzp | G | K | 0 | D | peptide | null | c1 epitope | VIRAL PROTEIN/IMMUNE SYSTEM | 07/25/16 | Structure of the HCV1-C1 Antibody-Antigen Complex | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | hepatitis c virus | Piepenbrink, K.H., Sundberg, E.J. | 2.262 | X-RAY DIFFRACTION | 0.261 | 0.218 | false | true | IGHV3 | IGKV3 | Kappa | 0 | -9.761033 | Unknown | null | TBD |
6ul6 | B | null | 0 | A | protein | null | bont/a | TOXIN/ANTITOXIN | 10/07/19 | Crystal Structure of BoNT/A-LCHn domain in complex with VNA ciA-D12/11/ciA-B5 and VHH ciA-H7 | CLOSTRIDIUM BOTULINUM; VICUGNA PACOS | vicugna pacos | null | clostridium botulinum | Lam, K., Jin, R. | 2.02 | X-RAY DIFFRACTION | 0.194 | 0.183 | false | true | IGHV1 | null | null | null | null | null | null | null |
7tbf | H | L | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/Immune System | 12/21/21 | Locally refined region of SARS-CoV-2 spike in complex with antibodies B1-182.1 and A19-61.1 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, T., Tsybovsky, T., Kwong, P.D. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
5wdf | H | L | 0 | P | peptide | null | hiv-1 gp41 peptide | IMMUNE SYSTEM | 07/05/17 | Crystal structure of 10E8v4-5R+100cF Fab in complex with HIV-1 gp41 peptide | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Kwon, Y.D., Kwong, P.D. | 3.1 | X-RAY DIFFRACTION | 0.281 | 0.247 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
4lve | null | B | 0 | null | null | null | null | IMMUNOGLOBULIN | 05/12/98 | LEN K30T MUTANT: A DOMAIN FLIP AS A RESULT OF A SINGLE AMINO ACID SUBSTITUTION | HOMO SAPIENS | null | homo sapiens | null | Schiffer, M., Pokkuluri, P.R. | 2.3 | X-RAY DIFFRACTION | 0.267 | 0.190 | false | true | null | IGKV4 | Kappa | null | null | null | null | null |
1shm | D | null | 0 | null | null | null | null | IMMUNE SYSTEM | 02/26/04 | Convergent solutions to VHH domain stabilization from natural and in vitro evolution | LAMA GLAMA | lama glama | null | null | Bond, C.J., Wiesmann, C., Marsters, J.C., Sidhu, S.S. | 1.9 | X-RAY DIFFRACTION | 0.236 | 0.185 | false | true | IGHV1 | null | null | null | null | null | null | null |
7p40 | C | D | 0 | E | protein | null | spike glycoprotein | VIRAL PROTEIN | 07/09/21 | P5C3 is a potent fab neutralizer | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | perez, L. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
4k8r | D | C | 0 | B | protein | null | proprotein convertase subtilisin/kexin type 9 | IMMUNE SYSTEM | 04/18/13 | An Antibody Against the C-terminal Domain of PCSK9 lowers LDL Cholesterol Levels in vivo | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Schiele, F., Nar, H. | 3.22 | X-RAY DIFFRACTION | 0.226 | 0.167 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
2j5l | C | B | 0 | A | peptide | null | apical membrane antigen 1 | IMMUNE SYSTEM | 09/18/06 | Structure of a Plasmodium falciparum apical membrane antigen 1-Fab F8. 12.19 complex | PLASMODIUM FALCIPARUM; MUS MUSCULUS | mus musculus | mus musculus | plasmodium falciparum | Igonet, S., Vulliez-Le Normand, B., Faure, G., Riottot, M.M., Kocken, C., Thomas, A.W., Bentley, G.A. | 2.9 | X-RAY DIFFRACTION | 0.278 | 0.212 | false | false | IGHV5 | IGKV4 | Kappa | 0 | -9.7 | SPR | null | 17229439 |
7p77 | A | null | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN | 07/19/21 | SARS-CoV-2 spike protein in complex with sybody#15 and sybody#68 in a 3up conformation | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; SYNTHETIC CONSTRUCT | synthetic construct | null | severe acute respiratory syndrome coronavirus2 | Walter, J.D., Hutter, C.A.J., Garaeva, A.A., Scherer, M., Zimmermann, I., Wyss, M., Rheinberger, J., Ruedin, Y., Earp, J.C., Egloff, P., Sorgenfrei, M., Huerlimann, L.M., Gonda, I., Meier, G., Remm, S., Thavarasah, S., Zimmer, G., Slotboom, D.J., Paulino, C., Plattet, P., Seeger, M.A. | 2.98 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
6hhd | B | null | 0 | A | protein | null | major prion protein | PROTEIN BINDING | 08/28/18 | Mouse Prion Protein in complex with Nanobody 484 | MUS MUSCULUS; CAMELUS DROMEDARIUS | camelus dromedarius | null | mus musculus | Soror, S., Abskharon, R., Wohlkonig, A. | 2.102 | X-RAY DIFFRACTION | 0.245 | 0.206 | false | true | IGHV1 | null | null | null | null | null | null | null |
7ktx | I | J | 0 | A | protein | null | er membrane protein complex subunit 1 | MEMBRANE PROTEIN/IMMUNE SYSTEM | 11/24/20 | Cryo-EM structure of Saccharomyces cerevisiae ER membrane protein complex bound to a Fab in DDM detergent | HOMO SAPIENS; SACCHAROMYCES CEREVISIAE BY4743 | homo sapiens | homo sapiens | saccharomyces cerevisiae by4743 | Miller-Vedam, L.E., Schirle Oakdale, N.S., Braeuning, B., Boydston, E.A., Sevillano, N., Popova, K.D., Bonnar, J.L., Shurtleff, M.J., Prabu, J.R., Stroud, R.M., Craik, C.S., Schulman, B.A., Weissman, J.S., Frost, A. | 4.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV2 | Kappa | null | null | null | null | null |
7v26 | e | f | 0 | E | protein | null | xg005 heavy chain | VIRAL PROTEIN | 08/07/21 | XG005-bound SARS-CoV-2 S | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhan, W.Q., Zhang, X., Sun, L., Chen, Z.G. | 3.85 | ELECTRON MICROSCOPY | null | null | false | false | IGHV2 | IGLV2 | Lambda | null | null | null | null | null |
3lhp | I | M | 0 | T | protein | null | 4e10_d0_1isea_004_n (t93) | IMMUNE SYSTEM | 01/22/10 | Crystal structure of HIV epitope-scaffold 4E10_D0_1ISEA_004_N 4E10 Fv complex | HOMO SAPIENS; ARTIFICIAL GENE | homo sapiens | homo sapiens | artificial gene | Holmes, M.A. | 2.7 | X-RAY DIFFRACTION | 0.335 | 0.243 | false | true | IGHV1 | IGKV3 | Kappa | 0 | -15.17 | SPR | null | 20826338 |
7lx5 | C | null | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN | 03/03/21 | The SARS-CoV-2 spike protein receptor binding domain bound to neutralizing nanobodies WNb 2 and WNb 10 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; VICUGNA PACOS | vicugna pacos | null | severe acute respiratory syndrome coronavirus2 | Pymm, P., Glukhova, A., Tham, W.-H. | 3.44 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
3j7e | F | E | 0 | null | null | null | null | IMMUNE SYSTEM | 06/23/14 | Electron cryo-microscopy of human papillomavirus 16 and H16.V5 Fab fragments | MUS MUSCULUS | mus musculus | mus musculus | null | Lee, H., Brendle, S.A., Bywaters, S.M., Christensen, N.D., Hafenstein, S. | 13.6 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
5w9m | H | I | 0 | G | protein | null | spike glycoprotein | VIRAL PROTEIN | 06/23/17 | MERS S ectodomain trimer in complex with variable domain of neutralizing antibody G4 | MIDDLE EAST RESPIRATORY SYNDROME-RELATED CORONAVIRUS; MUS MUSCULUS | mus musculus | mus musculus | middle east respiratory syndrome-relatedcoronavirus | Pallesen, J., Ward, A.B. | 4.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6dn0 | C | D | 0 | null | null | null | null | IMMUNE SYSTEM | 06/05/18 | Retrofitted antibodies with stabilizing mutations: Herceptin scFv mutant with VH K30D and VL S52D. | HOMO SAPIENS | homo sapiens | homo sapiens | null | Langley, D.B., Roome, B., Christ, D. | 2.0 | X-RAY DIFFRACTION | 0.234 | 0.205 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7t0k | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 11/29/21 | Crystal structure of S25-2 Fab Unliganded 4 | MUS MUSCULUS | mus musculus | mus musculus | null | Legg, M.S.G., Blackler, R.J., Evans, S.V. | 2.0 | X-RAY DIFFRACTION | 0.255 | 0.222 | false | true | IGHV7 | IGKV8 | Kappa | null | null | null | null | null |
3cm9 | B | M | 2 | null | null | null | null | IMMUNE SYSTEM | 03/21/08 | Solution Structure of Human SIgA2 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Bonner, A., Almogren, A., Furtado, P.B., Kerr, M.A., Perkins, S.J. | NOT | SOLUTION SCATTERING | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
2qtj | D | N | 3 | null | null | null | null | IMMUNE SYSTEM | 08/02/07 | Solution structure of human dimeric immunoglobulin A | HOMO SAPIENS | homo sapiens | homo sapiens | null | Bonner, A., Furtado, P.B., Almogren, A., Kerr, M.A., Perkins, S.J. | NOT | SOLUTION SCATTERING | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
5i8c | A | B | 0 | C | peptide | null | hiv-1 clade a bg505 fusion peptide (residue 512-520) | IMMUNE SYSTEM | 02/18/16 | Crystal Structure of HIV-1 Clade A BG505 Fusion Peptide (residue 512-520) in Complex with Broadly Neutralizing Antibody VRC34.01 Fab | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Xu, K., Zhou, T., Liu, K., Kwong, P.D. | 1.54 | X-RAY DIFFRACTION | 0.182 | 0.160 | false | true | IGHV1 | IGKV1 | Kappa | 0 | -10.371065 | Unknown | null | TBD |
4lcu | A | B | 0 | C | protein | null | ph-gated potassium channel kcsa | TRANSPORT PROTEIN, membrane protein | 06/23/13 | Structure of KcsA with E118A mutation | STREPTOMYCES LIVIDANS; MUS MUSCULUS | mus musculus | mus musculus | streptomyces lividans | Nimigean, C.M., Posson, D.J., McCoy, J.M. | 2.752 | X-RAY DIFFRACTION | 0.216 | 0.183 | false | true | IGHV1 | IGKV5 | Kappa | null | null | null | null | null |
5aaw | B | b | 0 | J | protein | null | dengue serotype 4 envelope protein domain 3 | null | 07/30/15 | Structure of a redesigned cross-reactive antibody to dengue virus with increased in vivo potency | DENGUE VIRUS; MUS MUSCULUS | mus musculus | null | dengue virus | Wong, Y., Robinson, L., Lescar, J., Sasisekharan, R. | 3.27 | X-RAY DIFFRACTION | 0.26258 | 0.22661 | true | true | unknown | unknown | unknown | 0 | -11.411242 | SPR | null | TBD |
6n2x | M | K | 0 | M | carbohydrate | NAG | polysaccharide | IMMUNE SYSTEM | 11/14/18 | Anti-HIV-1 Fab 2G12 + Man9 re-refinement | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Calarese, D.A., Stanfield, R.L., Wilson, I.A. | 3.0 | X-RAY DIFFRACTION | 0.283 | 0.243 | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null |
2vxs | I | M | 0 | A | protein | null | interleukin-17a | CYTOKINE | 07/09/08 | Structure of IL-17A in complex with a potent, fully human neutralising antibody | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Gerhardt, S., Hargreaves, D., Pauptit, R.A., Davies, R.A., Russell, C., Welsh, F., Tuske, S.J., Coales, S.J., Hamuro, Y., Needham, M.R.C., Langham, C., Barker, W., Bell, P., Aziz, A., Smith, M.J., Dawson, S., Abbott, W.M. | 2.63 | X-RAY DIFFRACTION | 0.264 | 0.213 | false | true | IGHV3 | IGLV6 | Lambda | 0 | -11.83 | SPR | null | 19835883 |
6w51 | M | N | 0 | null | null | null | null | IMMUNE SYSTEM | 03/12/20 | Structure of the antibody fragment H2 in complex with HLA-A*02:01/p53R175H | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | null | Wright, K.M., Gabelli, S.B. | 3.53 | X-RAY DIFFRACTION | 0.283 | 0.200 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7rdw | H | L | 0 | M | protein | null | glycoprotein 120 | IMMUNE SYSTEM | 07/12/21 | Crystal Structure of FH1 Fab bound to HXb2 HIV-1 gp120 core | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Weidle, C., Pancera, M. | 3.55 | X-RAY DIFFRACTION | 0.295 | 0.260 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6nfc | J | M | 0 | G | protein | null | hiv-1 env bg505 md64 n332-gt5 sosip gp41 | VIRAL PROTEIN | 12/19/18 | BG505 MD64 N332-GT5 SOSIP trimer in complex with BG18-like precursor HMP42 fragmentantigen binding and base-binding RM20A3 fragment antigen binding | MACACA MULATTA; HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | Ozorowski, G., Torres, J.L., Ward, A.B. | 3.43 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
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