pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 354
values | r_factor stringclasses 342
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
6yxm | H | L | 0 | B | peptide | null | unknown | IMMUNE SYSTEM | 05/03/20 | Crystal structure of ACPA 1F2 in complex with CII-C-39-CIT | HOMO SAPIENS | null | null | null | Ge, C., Holmdahl, R. | 2.85 | X-RAY DIFFRACTION | 0.276 | 0.210 | false | false | IGHV7 | unknown | unknown | null | null | null | null | null |
1yeg | H | L | 0 | L | Hapten | BPN | PARANITROBENZYL ALCOHOL | CATALYTIC ANTIBODY | 05/29/97 | STRUCTURE OF IGG2A FAB FRAGMENT (D2.3) COMPLEXED WITH REACTION PRODUCT | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Gigant, B., Knossow, M. | 2.0 | X-RAY DIFFRACTION | 0.240 | 0.199 | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
5ijv | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 03/02/16 | Crystal structure of bovine Fab E03 | BOS TAURUS | bos taurus | bos taurus | null | Stanfield, R.L., Wilson, I.A. | 2.2 | X-RAY DIFFRACTION | 0.247 | 0.204 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
7pg8 | F | D | 0 | H | protein | null | ion transport protein,voltage-gated sodium channel | MEMBRANE PROTEIN | 08/13/21 | NaV_Ae1/Sp1CTD_pore-ANT05 complex | HOMO SAPIENS; ALKALILIMNICOLA EHRLICHII MLHE-1; RUEGERIA POMEROYI DSS-3 | homo sapiens | homo sapiens | alkalilimnicola ehrlichii mlhe-1, ruegeriapomeroyi dss-3 | Lolicato, M., Arrigoni, C. | 4.5 | X-RAY DIFFRACTION | 0.352 | 0.303 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6qkd | null | M | 0 | null | null | null | null | IMMUNE SYSTEM | 01/29/19 | CRYSTAL STRUCTURE OF vhh-based FAB-fragment of antibody BCD-085 | LAMA GLAMA | null | lama glama | null | Kostareva, O.S., Kolyadenko, I.A., Ulitin, A.B., Ekimova, V.M., Evdokimov, S.R., Garber, M.B., Tishchenko, T.V., Gabdulkhakov, A.G. | 1.9 | X-RAY DIFFRACTION | 0.228 | 0.169 | false | true | null | IGKV3 | Kappa | null | null | null | null | null |
6lcs | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 11/19/19 | Crystal structure of 73MuL9 Fv-clasp fragment in complex with GA-pyridine analogue | MUS MUSCULUS | mus musculus | mus musculus | null | Nakamura, T., Takagi, J., Yamagata, Y., Morioka, H. | 2.6 | X-RAY DIFFRACTION | 0.260 | 0.214 | false | true | IGHV3 | IGKV4 | Kappa | null | null | null | null | null |
3eyo | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 10/21/08 | Crystal structure of anti-human cytomegalovirus antibody 8F9 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Thomson, C.A., Bryson, S., McLean, G.R., Creagh, A.L., Pai, E.F., Schrader, J.W. | 2.5 | X-RAY DIFFRACTION | 0.268 | 0.241 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
5nb5 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 03/01/17 | Principles for computational design of antibodies | ESCHERICHIA COLI | null | null | null | Dym, O., Fleishman, S.J. | 3.0 | X-RAY DIFFRACTION | 0.257 | 0.223 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
1mak | null | A | 4 | null | null | null | null | IMMUNOGLOBULIN | 09/16/93 | SOLUTION STRUCTURE OF AN ISOLATED ANTIBODY VL DOMAIN | MUS MUSCULUS | null | mus musculus | null | Constantine, K.L., Friedrichs, M.S., Metzler, W.J., Wittekind, M., Hensley, P., Mueller, L. | NOT | SOLUTION NMR | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null |
1cft | B | A | 0 | C | peptide | null | protein (antigen bound peptide) | POLYSPECIFICITY | 03/19/99 | ANTI-P24 (HIV-1) FAB FRAGMENT CB41 COMPLEXED WITH AN EPITOPE-UNRELATED D-PEPTIDE | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | null | Keitel, T., Kramer, A., Wessner, H., Scholz, C., Schneider-Mergener, J., Hoehne, W. | 2.8 | X-RAY DIFFRACTION | 0.328 | 0.237 | false | false | IGHV1 | IGKV14 | Kappa | null | null | null | null | null |
6ban | H | G | 0 | P | protein | null | inactive tyrosine-protein kinase transmembrane receptorror1 | IMMUNE SYSTEM | 10/14/17 | Potent and Selective Antitumor Activity of a T-Cell Engaging Bispecific Antibody Targeting a Membrane-Proximal Epitope of ROR1 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Park, H., Rader, C. | 1.95 | X-RAY DIFFRACTION | 0.196 | 0.160 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6az2 | A | F | 0 | B | protein | null | histone chaperone asf1 | IMMUNE SYSTEM | 09/09/17 | Crystal structure of Asf1-Fab 12E complex | HOMO SAPIENS; SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C) | homo sapiens | homo sapiens | saccharomyces cerevisiae (strain atcc 204508 /s288c) | Bailey, L.J., Kossiakoff, A.A. | 2.477 | X-RAY DIFFRACTION | 0.228 | 0.193 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
4nhh | R | P | 0 | N | protein | null | 2g12 igg dimer heavy chain | IMMUNE SYSTEM | 11/05/13 | Structure of 2G12 IgG Dimer | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Wu, Y., West Jr., A.P., Kim, H.J., Thornton, M.E., Ward, A.B., Bjorkman, P.J. | 6.5 | X-RAY DIFFRACTION | 0.366 | 0.381 | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null |
4tnv | U | h | 0 | Q | protein | null | avermectin-sensitive glutamate-gated chloride channel gluclalpha | Transport Protein/immune System | 06/05/14 | C. elegans glutamate-gated chloride channel (GluCl) in complex with Fab in a non-conducting conformation | CAENORHABDITIS ELEGANS; MUS MUSCULUS | mus musculus | mus musculus | caenorhabditis elegans | Althoff, T., Hibbs, R.E., Banerjee, S., Gouaux, E. | 3.6 | X-RAY DIFFRACTION | 0.283 | 0.261 | false | false | unknown | unknown | unknown | null | null | null | null | null |
6ey6 | L | null | 0 | D | protein | null | t9ss component cytoplasmic membrane protein porm | PROTEIN TRANSPORT | 11/10/17 | C-terminal part (residues 315-516) of PorM with the llama naobody nb130 | PORPHYROMONAS GINGIVALIS; LAMA GLAMA | lama glama | null | porphyromonas gingivalis | Leone, P., Cambillau, C., Roussel, A. | 2.1 | X-RAY DIFFRACTION | 0.215 | 0.181 | false | true | IGHV1 | null | null | null | null | null | null | null |
2arj | B | A | 0 | R | protein | null | t-cell surface glycoprotein cd8 alpha chain | Immune System | 08/19/05 | CD8alpha-alpha in complex with YTS 105.18 Fab | MUS MUSCULUS; RATTUS NORVEGICUS | rattus norvegicus | rattus norvegicus | mus musculus | Shore, D.A., Teyton, L., Dwek, R.A., Rudd, P.M., Wilson, I.A. | 2.88 | X-RAY DIFFRACTION | 0.277 | 0.220 | false | false | IGHV2 | IGKV6 | Kappa | null | null | null | null | null |
5f7l | D | null | 0 | C | protein | null | adhesin binding fucosylated histo-blood group antigen | CELL ADHESION | 12/08/15 | Blood group antigen binding adhesin BabA of Helicobacter pylori strain 17875 in complex with Nanobody Nb-ER14 | HELICOBACTER PYLORI; LAMA GLAMA | lama glama | null | helicobacter pylori | Moonens, K., Gideonsson, P., Subedi, S., Romao, E., Oscarson, S., Muyldermans, S., Boren, T., Remaut, H. | 2.74 | X-RAY DIFFRACTION | 0.265 | 0.212 | false | true | IGHV1 | null | null | null | null | null | null | null |
7mzi | H | L | 0 | A | protein | null | spike protein s1 | VIRAL PROTEIN | 05/24/21 | SARS-CoV-2 receptor binding domain bound to Fab WCSL 129 | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Pymm, P., Tan, L.L., Dietrich, M.H., Chan, L.J., Tham, W.H. | 1.85 | X-RAY DIFFRACTION | 0.208 | 0.174 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
6oao | B | b | 0 | A | protein | null | duffy binding surface protein region ii | CELL INVASION | 03/18/19 | Structure of DBP in complex with human neutralizing antibody 092096 | PLASMODIUM VIVAX; HOMO SAPIENS | homo sapiens | null | plasmodium vivax | Urusova, D., Tolia, N.H. | 3.497 | X-RAY DIFFRACTION | 0.279 | 0.238 | true | true | unknown | unknown | unknown | null | null | null | null | null |
7s6c | H | F | 0 | B | protein | null | 6-deoxyerythronolide-b synthase erya2, modules 3 and 4,lsd14 polyketide synthase fusion | BIOSYNTHETIC PROTEIN | 09/13/21 | CryoEM structure of modular PKS holo-Lsd14 stalled at the condensation step and bound to antibody fragment 1B2, composite structure | SACCHAROPOLYSPORA ERYTHRAEA; STREPTOMYCES LASALOCIDI; HOMO SAPIENS | homo sapiens | homo sapiens | saccharopolyspora erythraea, streptomyceslasalocidi | Bagde, S.R., Kim, C.-Y., Fromme, J.C. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV2 | Kappa | null | null | null | null | null |
7sla | B | null | 0 | A | protein | null | sodium/glucose cotransporter 1 | MEMBRANE PROTEIN | 10/23/21 | CryoEM structure of SGLT1 at 3.15 Angstrom resolution | HOMO SAPIENS; SYNTHETIC CONSTRUCT | synthetic construct | null | homo sapiens | Qu, Q., Han, L., Panova, O., Feng, L., Skiniotis, G. | 3.15 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
7li6 | B | C | 0 | A | protein | null | sodium-dependent serotonin transporter | MEMBRANE PROTEIN | 01/26/21 | apo SERT reconstituted in lipid nanodisc in KCl | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Yang, D., Gouaux, E. | 3.5 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
4w81 | A | null | 0 | null | null | null | null | IMMUNE SYSTEM | 08/22/14 | Periplasmically Produced Monomeric Single Domain Antibody (sdAb) C22A/C99V variant against Staphylococcal enterotoxin B (SEB) at pH 8.0 | LAMA GLAMA | lama glama | null | null | George, J., Legler, P.M. | 2.25 | X-RAY DIFFRACTION | 0.233 | 0.193 | false | true | IGHV1 | null | null | null | null | null | null | null |
4xnz | B | C | 0 | A | protein | null | envelope glycoprotein gp160,envelope glycoprotein gp160 | IMMUNE SYSTEM | 01/16/15 | Crystal structure of broadly and potently neutralizing antibody VRC06B in complex with HIV-1 clade A/E strain 93TH057 gp120 | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Zhou, T., Srivatsan, S., Kwong, P.D. | 3.389 | X-RAY DIFFRACTION | 0.301 | 0.244 | false | true | unknown | unknown | unknown | null | null | null | null | null |
2kqn | null | A | 7 | null | null | null | null | IMMUNE SYSTEM | 11/11/09 | Solution structure of the AL-09 H87Y immunoglobulin light chain variable domain | HOMO SAPIENS | null | homo sapiens | null | Volkman, B.F., Peterson, F.C., Ramirez-Alvarado, M., Baden, E.M. | NOT | SOLUTION NMR | null | null | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
4aix | null | B | 0 | null | null | null | null | IMMUNE SYSTEM | 02/15/12 | Crystallographic structure of an amyloidogenic variant, 3rC34Y, of the germinal line lambda 3 | HOMO SAPIENS | null | homo sapiens | null | Villalba, M.I., Luna, O.D., Rudino-Pinera, E., Sanchez, R., Sanchez-Lopez, R., Rojas-Trejo, S., Olamendi-Portugal, T., Fernandez-Velasco, D.A., Becerril, B. | 1.8 | X-RAY DIFFRACTION | 0.2119 | 0.1684 | false | true | null | IGLV3 | Lambda | null | null | null | null | null |
4lu5 | I | M | 0 | A | protein | null | a33r | IMMUNE SYSTEM | 07/24/13 | Structure of murine IgG2a A20G2-Fab in complex with vaccinia antigen A33R at the resolution of 2.9 Angstroms | MUS MUSCULUS; VACCINIA VIRUS | mus musculus | mus musculus | vaccinia virus | Matho, M.H., Schlossman, A.M., Zajonc, D.M. | 2.9 | X-RAY DIFFRACTION | 0.282 | 0.234 | false | true | IGHV5 | IGKV1 | Kappa | 0 | -13.889525 | SPR | null | TBD |
1rzg | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 12/24/03 | Crystal structure of Human anti-HIV-1 GP120 reactive antibody 412d | HOMO SAPIENS | homo sapiens | homo sapiens | null | Huang, C.C., Venturi, M., Majeed, S., Moore, M.J., Phogat, S., Zhang, M.-Y., Dimitrov, D.S., Hendrickson, W.A., Robinson, J., Sodroski, J., Wyatt, R., Choe, H., Farzan, M., Kwong, P.D. | 2.0 | X-RAY DIFFRACTION | 0.251 | 0.201 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7ldd | I | i | 0 | C | protein | null | glutamate receptor 1 | MEMBRANE PROTEIN/IMMUNE SYSTEM | 01/13/21 | native AMPA receptor | MUS MUSCULUS | mus musculus | null | mus musculus | Yu, J., Rao, P., Gouaux, E. | 3.4 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
5x2n | J | K | 0 | C | D | protein | protein | NA | NA | taste receptor, type 1, member 2a | taste receptor, type 1, member 3 | SIGNALING PROTEIN/IMMUNE SYSTEM | 02/02/17 | Crystal structure of the medaka fish taste receptor T1r2a-T1r3 ligand binding domains in complex with L-alanine | ORYZIAS LATIPES; MUS MUSCULUS | mus musculus | mus musculus | oryzias latipes | oryzias latipes | Nuemket, N., Yasui, N., Atsumi, N., Yamashita, A. | 2.2 | X-RAY DIFFRACTION | 0.244 | 0.195 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
1clo | H | L | 0 | null | null | null | null | IMMUNOGLOBULIN | 05/01/96 | ANTI-CARCINOEMBRYONIC ANTIGEN MONOCLONAL ANTIBODY A5B7 | MUS MUSCULUS | mus musculus | mus musculus | null | Banfield, M.J., King, D.J., Mountain, A., Brady, R.L. | 2.1 | X-RAY DIFFRACTION | unknown | 0.212 | false | false | IGHV7 | IGKV4 | Kappa | null | null | null | null | null |
5f3j | D | d | 0 | B | protein | null | duffy receptor | IMMUNE SYSTEM | 12/02/15 | Crystal structure of DBP in complex with inhibitory monoclonal antibody 2D10 | PLASMODIUM VIVAX (STRAIN SALVADOR I); MUS MUSCULUS | mus musculus | null | plasmodium vivax (strain salvador i) | Chen, E., Salinas, N.D., Tolia, N.H. | 4.001 | X-RAY DIFFRACTION | 0.300 | 0.267 | true | true | unknown | unknown | unknown | null | null | null | null | null |
4gxv | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 09/04/12 | Crystal structure of anti-influenza virus antibody 1F1 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Ekiert, D.C., Wilson, I.A. | 1.449 | X-RAY DIFFRACTION | 0.207 | 0.181 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
3w9e | A | B | 0 | C | protein | null | envelope glycoprotein d | VIRAL PROTEIN/IMMUNE SYSTEM | 04/03/13 | Structure of Human Monoclonal Antibody E317 Fab Complex with HSV-2 gD | HOMO SAPIENS; HUMAN HERPESVIRUS 2 | homo sapiens | homo sapiens | human herpesvirus 2 | Lee, C.C., Lin, L.L., Wang, A.H.J. | 2.3 | X-RAY DIFFRACTION | 0.255 | 0.203 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
3mnv | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 04/22/10 | Crystal structure of the non-neutralizing HIV antibody 13H11 Fab fragment | MUS MUSCULUS,HOMO SAPIENS | mus musculus,homo sapiens | mus musculus,homo sapiens | null | Nicely, N.I., Dennison, S.M., Kelsoe, G., Liao, H.-X., Alam, S.M., Haynes, B.F. | 2.4 | X-RAY DIFFRACTION | 0.228 | 0.181 | false | true | IGHV9 | IGKV8 | Kappa | null | null | null | null | null |
7lop | B | C | 0 | A | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 02/10/21 | Crystal structure of SARS-CoV-2 receptor binding domain in complex with antibodies CV05-163 and CR3022 | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Yuan, M., Zhu, X., Wilson, I.A. | 2.246 | X-RAY DIFFRACTION | 0.268 | 0.220 | false | true | IGHV5 | IGKV4 | Kappa | null | null | null | null | null |
6vrl | B | C | 0 | A | protein | null | sodium-dependent serotonin transporter | TRANSPORT PROTEIN | 02/07/20 | Cryo-EM structure of the wild-type human serotonin transporter complexed with I-paroxetine and 8B6 Fab | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Coleman, J.A., Navratna, V., Yang, D. | 3.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV6 | Kappa | null | null | null | null | null |
5x8l | S | N | 0 | D | protein | null | programmed cell death 1 ligand 1 | IMMUNE SYSTEM | 03/03/17 | PD-L1 in complex with atezolizumab | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Heo, Y.S., Lee, H.T. | 3.1 | X-RAY DIFFRACTION | 0.256 | 0.208 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7mtb | H | L | 3 | G | protein | null | rhodopsin kinase grk1 | MEMBRANE, Signaling protein/Immune System | 05/13/21 | Rhodopsin kinase (GRK1)-S5E/S488E/T489E in complex with rhodopsin and Fab6 | BOS TAURUS; HOMO SAPIENS | homo sapiens | homo sapiens | bos taurus | Chen, Q., Chen, C.-L., Tesmer, J.J.G. | 4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
4jr9 | H | L | 0 | A | protein | null | nitrite extrusion protein 1 | TRANSPORT PROTEIN/Immune System | 03/21/13 | Crystal structure of nitrate/nitrite exchanger NarK | ESCHERICHIA COLI; MUS MUSCULUS | mus musculus | mus musculus | escherichia coli | Zheng, H., Wisedchaisri, G., Gonen, T. | 2.6 | X-RAY DIFFRACTION | 0.261 | 0.229 | false | false | IGHV9 | IGKV19 | Kappa | null | null | null | null | null |
3hae | T | S | 0 | P | R | protein | peptide | NA | NA | hla class i histocompatibility antigen, a-2 alpha chain | nyeso-1 peptide | IMMUNE SYSTEM | 05/01/09 | Rational development of high-affinity T-cell receptor-like antibodies | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | homo sapiens | | Stewart-Jones, G., Wadle, A., Hombach, A., Shenderov, E., Held, G., Fischer, E. | 2.9 | X-RAY DIFFRACTION | 0.283 | 0.201 | false | true | IGHV3 | IGLV2 | Lambda | 0 | -10 | SPR | null | 19307587 |
5uel | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 01/02/17 | Crystal structure of 354NC102 Fab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Sievers, S.A., Gristick, H.B., Bjorkman, P.J. | 1.6 | X-RAY DIFFRACTION | 0.201 | 0.177 | false | true | unknown | IGKV3 | Kappa | null | null | null | null | null |
2wub | H | L | 0 | A | protein | null | hepatocyte growth factor activator long chain | HYDROLASE/IMMUNE SYSTEM | 10/01/09 | Crystal structure of HGFA in complex with the allosteric non- inhibitory antibody Fab40.deltaTrp | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Ganesan, R., Eigenbrot, C., Shia, S., , | 2.9 | X-RAY DIFFRACTION | 0.275 | 0.216 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -9.3 | SPR | 25 | 20004165 |
7rsn | F | K | 0 | G | protein | null | amc018 gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 08/11/21 | AMC018 SOSIP.v4.2 in complex with PGV04 Fab | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Cottrell, C.A., Ward, A.B. | 3.49 | ELECTRON MICROSCOPY | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null |
7jxd | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 08/27/20 | Mapping neutralizing and immunodominant sites on the SARS-CoV-2 spike receptor-binding domain by structure-guided high-resolution serology | HOMO SAPIENS | homo sapiens | homo sapiens | null | Park, Y.J., Tortorici, M.A., Walls, A.C., Czudnochowski, N., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G., Veesler, D. | 2.5 | X-RAY DIFFRACTION | 0.259 | 0.203 | false | true | IGHV3 | IGLV6 | Lambda | null | null | null | null | null |
7sc1 | H | L | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 09/26/21 | Structure of the SARS-CoV-2 S 6P trimer in complex with the human neutralizing antibody Fab fragment, R40-1G8 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Fan, C., Bjorkman, P.J. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
3qxw | A | null | 0 | null | null | null | null | IMMUNE SYSTEM | 03/02/11 | Free structure of an anti-methotrexate CDR1-4 Graft VHH Antibody | LAMA GLAMA | lama glama | null | null | Fanning, S.W., Horn, J.R. | 1.85 | X-RAY DIFFRACTION | 0.238 | 0.189 | false | true | IGHV1 | null | null | null | null | null | null | null |
7kbi | C | null | 0 | A | B | protein | protein | NA | NA | ricin chain a | ricin chain b | TOXIN | 10/02/20 | Ricin bound to VHH antibody V5E1 | VICUGNA PACOS; RICINUS COMMUNIS | vicugna pacos | null | ricinus communis | ricinus communis | Rudolph, M.J. | 3.049 | X-RAY DIFFRACTION | 0.274 | 0.237 | false | true | IGHV1 | null | null | null | null | null | null | null |
4jm2 | D | C | 0 | E | protein | null | gp120 | IMMUNE SYSTEM/VIRAL PROTEIN | 03/13/13 | Crystal Structure of PGT 135 Fab in Complex with gp120 Core Protein from HIV-1 Strain JR-FL Bound to CD4 and 17b Fab | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Kong, L., Wilson, I.A. | 3.1 | X-RAY DIFFRACTION | 0.285 | 0.238 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
7joo | H | L | 0 | C | protein | null | inducible t-cell costimulator | IMMUNE SYSTEM | 08/06/20 | Crystal structure of ICOS in complex with antibody STIM003 and anti-kappa VHH domain | LAMA GLAMA; HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Rujas, E., Sicard, T., Julien, J.P. | 2.4 | X-RAY DIFFRACTION | 0.297 | 0.241 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
2bdn | H | L | 0 | A | protein | null | small inducible cytokine a2 | immune system | 10/20/05 | Crystal structure of human MCP-1 bound to a blocking antibody, 11K2 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | null | Boriack-Sjodin, P.A., Rushe, M., Reid, C., Jarpe, M, van Vlijmen, H, Bailly, V. | 2.53 | X-RAY DIFFRACTION | 0.277 | 0.219 | false | true | IGHV14 | IGKV13 | Kappa | 0 | -15.46 | Other | 25 | 16682434 |
5vnw | D | null | 0 | A | protein | null | serum albumin | TRANSPORT PROTEIN/DE NOVO PROTEIN | 05/01/17 | Crystal structure of Nb.b201 bound to human serum albumin | HOMO SAPIENS; SYNTHETIC CONSTRUCT | synthetic construct | null | homo sapiens | McMahon, C., Kruse, A.C. | 2.6 | X-RAY DIFFRACTION | 0.256 | 0.221 | false | true | IGHV1 | null | null | null | null | null | null | null |
7wd0 | a | b | 0 | A | protein | null | heavy chain of s5d2 fab | VIRAL PROTEIN | 12/20/21 | SARS-CoV-2 Beta spike in complex with two S5D2 Fabs | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS | mus musculus | mus musculus | severe acute respiratory syndrome coronavirus2 | Wang, Y.F., Cong, Y. | 3.3 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
7vsw | J | I | 0 | null | null | null | null | BIOSYNTHETIC PROTEIN | 10/27/21 | Crystal structure of a Fab-like fragment of anti-mesothelin antibody | HOMO SAPIENS | homo sapiens | homo sapiens | null | Yang, Z., Ying, T. | 3.0 | X-RAY DIFFRACTION | 0.253 | 0.217 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
7kkk | B | null | 0 | A | protein | null | sars-cov-2 spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 10/27/20 | SARS-CoV-2 Spike in complex with neutralizing nanobody Nb6 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; SYNTHETIC CONSTRUCT | synthetic construct | null | severe acute respiratory syndrome coronavirus2 | Schoof, M.S., Faust, B.F., Saunders, R.A., Sangwan, S., Rezelj, V., Hoppe, N., Boone, M., Billesboelle, C.B., Puchades, C., Azumaya, C.M., Kratochvil, H.T., Zimanyi, M., Desphande, I., Liang, J., Dickinson, S., Nguyen, H.C., Chio, C.M., Merz, G.E., Thompson, M.C., Diwanji, D., Schaefer, K., Anand, A.A., Dobzinski, N., ... | 3.03 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
7rkn | D | d | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 07/22/21 | Structure of CX3CL1-US28-Gi-scFv16 in OC-state | HOMO SAPIENS; MUS MUSCULUS; HUMAN CYTOMEGALOVIRUS | mus musculus | null | homo sapiens | homo sapiens | Tsutsumi, N., Qu, Q., Jude, K.M., Skiniotis, G., Garcia, K.C. | 3.6 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
6mty | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 10/22/18 | Crystal structure of a human anti-ZIKV-DENV neutralizing antibody MZ4 isolated following ZPIV vaccination | HOMO SAPIENS | homo sapiens | homo sapiens | null | Sankhala, R.S., Dussupt, V., Donofrio, G., Choe, M., Modjarrad, K., Michael, N.L., Krebs, S.J., Joyce, M.G. | 2.951 | X-RAY DIFFRACTION | 0.251 | 0.217 | false | true | IGHV4 | IGLV1 | Lambda | null | null | null | null | null |
7n4n | D | null | 0 | A | protein | null | beta-secretase 2 | HYDROLASE/INHIBITOR | 06/04/21 | BACE-2 in complex with ligand 36 | HOMO SAPIENS | homo sapiens | null | homo sapiens | Shaffer, P.L. | 1.41 | X-RAY DIFFRACTION | 0.207 | 0.163 | false | true | IGHV3 | null | null | null | null | null | null | null |
7qiv | C | null | 0 | B | A | protein | protein | NA | NA | complement c3b alpha' chain | complement c3 beta chain | IMMUNE SYSTEM | 12/16/21 | Structure of human C3b in complex with the EWE nanobody | LAMA GLAMA; HOMO SAPIENS | lama glama | null | homo sapiens | homo sapiens | Pedersen, H., Andersen, G.R. | 2.8 | X-RAY DIFFRACTION | 0.275 | 0.235 | false | true | IGHV1 | null | null | null | null | null | null | null |
5cgy | C | D | 0 | null | null | null | null | IMMUNE SYSTEM | 07/09/15 | Fab fragment of Chikungunya virus neutralizing human monoclonal antibody 4J21 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Long, F., Crowe, J.E., Rossmann, M.G. | 2.07 | X-RAY DIFFRACTION | 0.216 | 0.168 | false | false | IGHV7 | IGLV1 | Lambda | null | null | null | null | null |
1fe8 | J | N | 0 | C | protein | null | von willebrand factor | IMMUNE SYSTEM | 07/21/00 | CRYSTAL STRUCTURE OF THE VON WILLEBRAND FACTOR A3 DOMAIN IN COMPLEX WITH A FAB FRAGMENT OF IGG RU5 THAT INHIBITS COLLAGEN BINDING | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Bouma, B., Huizinga, E.G., Schiphorst, M.E., Sixma, J.J., Kroon, J., Gros, P. | 2.03 | X-RAY DIFFRACTION | 0.264 | 0.227 | false | false | IGHV2 | IGKV10 | Kappa | 0.000002 | -7.774786 | Unknown | null | TBD |
7pg8 | X | V | 0 | O | protein | null | ion transport protein,voltage-gated sodium channel | MEMBRANE PROTEIN | 08/13/21 | NaV_Ae1/Sp1CTD_pore-ANT05 complex | HOMO SAPIENS; ALKALILIMNICOLA EHRLICHII MLHE-1; RUEGERIA POMEROYI DSS-3 | homo sapiens | homo sapiens | alkalilimnicola ehrlichii mlhe-1, ruegeriapomeroyi dss-3 | Lolicato, M., Arrigoni, C. | 4.5 | X-RAY DIFFRACTION | 0.352 | 0.303 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6p3s | A | B | 0 | L | protein | null | hemagglutinin | IMMUNE SYSTEM/VIRAL PROTEIN | 05/27/20 | Crystal structure of human Fab H5.28 in complex with influenza A H5N1 Vietnam hemagglutinin head domain | HOMO SAPIENS; INFLUENZA A VIRUS (A/CHICKEN/VIETNAM/32/2004(H5N1)) | homo sapiens | homo sapiens | influenza a virus(a/chicken/vietnam/32/2004(h5n1)) | Dong, J., Crowe, J.E. | 4.0 | X-RAY DIFFRACTION | 0.326 | 0.281 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
4kht | H | L | 0 | A | protein | null | gp41 helix | immune system | 05/01/13 | Triple helix bundle of GP41 complexed with fab 8066 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Li, M., Gustchina, A,, Wlodawer, A. | 2.817 | X-RAY DIFFRACTION | 0.266 | 0.215 | false | false | IGHV1 | IGLV3 | Lambda | 0 | -11.413991 | ITC | null | TBD |
5tjd | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 10/04/16 | Computer-based rational design of improved functionality for antibody catalysts toward organophosphorus compounds | HOMO SAPIENS | homo sapiens | homo sapiens | null | Chatziefthimiou, S., Stepanova, A., Smirnov, I., Gabibov, A., Wilmanns, M. | 2.1 | X-RAY DIFFRACTION | 0.249 | 0.196 | false | true | IGHV4 | IGLV1 | Lambda | null | null | null | null | null |
3dv6 | B | A | 0 | B | carbohydrate | KDO | 3-DEOXY-D-MANNO-OCT-2-ULOSONIC ACID | IMMUNE SYSTEM | 07/18/08 | Crystal structure of SAG506-01, tetragonal, crystal 2 | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Brooks, C.L., Blackler, R.J., Gerstenbruch, S., Kosma, P., Muller-Loennies, S., Brade, H., Evans, S.V. | 1.95 | X-RAY DIFFRACTION | 0.303 | 0.229 | false | true | IGHV7 | IGKV8 | Kappa | null | null | null | null | null |
3o2v | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 07/22/10 | Crystal structure of 1E9 PheL89Ser/LeuH47Trp/MetH100bPhe, an engineered Diels-Alderase Fab with modified specificity and catalytic activity | MUS MUSCULUS, HOMO SAPIENS | mus musculus, homo sapiens | mus musculus, homo sapiens | null | Verdino, P., Wilson, I.A. | 2.3 | X-RAY DIFFRACTION | 0.219 | 0.192 | false | true | IGHV9 | IGKV1 | Kappa | null | null | null | null | null |
1igi | H | L | 0 | null | null | null | null | IMMUNOGLOBULIN | 02/19/93 | 26-10 FAB:DIGOXIN COMPLEX-AFFINITY AND SPECIFICITY DUE TO SURFACE COMPLEMENTARITY | MUS MUSCULUS | mus musculus | mus musculus | null | Jeffrey, P.D., Sheriff, S. | 2.7 | X-RAY DIFFRACTION | unknown | 0.177 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
3gb7 | A | B | 0 | C | protein | null | voltage-gated potassium channel | MEMBRANE PROTEIN | 02/18/09 | Potassium Channel KcsA-Fab complex in Li+ | STREPTOMYCES LIVIDANS; MUS MUSCULUS | mus musculus | mus musculus | streptomyces lividans | Thompson, A.N., Ilsoo, K., Panosian, T.D., Iverson, T.M., Allen, T.W., Nimigean, C.M. | 2.85 | X-RAY DIFFRACTION | 0.285 | 0.239 | false | false | IGHV1 | IGKV5 | Kappa | null | null | null | null | null |
7ey5 | H | L | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 05/29/21 | Local CryoEM structure of the SARS-CoV-2 S6PV2 in complex with BD-771 Fab and BD-821 Fab | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhang, Z.Y. | 3.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6b70 | C | D | 0 | A | protein | null | insulin | HYDROLASE/IMMUNE SYSTEM/HORMONE | 10/03/17 | Cryo-EM structure of human insulin degrading enzyme in complex with FAB H11-E heavy chain, FAB H11-E light chain and insulin | HOMO SAPIENS; MUS MUSCULUS | mus musculus, homo sapiens | mus musculus, homo sapiens | homo sapiens | Liang, W.G., Zhang, Z., Bailey, L.J., Kossiakoff, A.A., Tan, Y.Z., Wei, H., Carragher, B., Potter, S.C., Tang, W.J. | 3.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5wk3 | U | T | 0 | C | protein | null | c-c motif chemokine 17 | IMMUNE SYSTEM | 07/24/17 | CRYSTAL STRUCTURE OF THE COMPLEX BETWEEN CCL17 AND M116 FAB | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Teplyakov, A., Obmolova, G., Gilliland, G.L. | 1.9 | X-RAY DIFFRACTION | 0.231 | 0.180 | false | true | IGHV5 | IGKV4 | Kappa | null | null | null | null | null |
5ye4 | A | B | 0 | E | peptide | null | di-acetylated histone h4 | NUCLEAR PROTEIN | 09/15/17 | Crystal structure of the complex of di-acetylated histone H4 and 1A9D7 Fab fragment | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | Matsuda, T., Ito, T., Wakamori, M., Umehara, T. | 1.799 | X-RAY DIFFRACTION | 0.224 | 0.194 | false | true | IGHV9 | IGKV19 | Kappa | null | null | null | null | null |
5vaq | B | null | 0 | A | protein | null | beta-klotho | SIGNALING PROTEIN | 03/27/17 | Crystal Structure of Beta-Klotho in Complex with FGF21CT | HOMO SAPIENS; LAMA GLAMA; SYNTHETIC CONSTRUCT | lama glama | null | homo sapiens | Lee, S., Schlessinger, J. | 2.606 | X-RAY DIFFRACTION | 0.229 | 0.191 | false | true | IGHV1 | null | null | null | null | null | null | null |
2ltq | C | B | 8 | A | protein | null | disulfide bond formation protein b | MEMBRANE PROTEIN, OXIDOREDUCTASE | 05/30/12 | High resolution structure of DsbB C41S by joint calculation with solid-state NMR and X-ray data | ESCHERICHIA COLI; MUS MUSCULUS | mus musculus | mus musculus | escherichia coli | Tang, M., Sperling, L.J., Schwieters, C.D., Nesbitt, A.E., Gennis, R.B., Rienstra, C.M. | NOT | SOLID-STATE NMR | null | null | false | false | IGHV5 | IGKV8 | Kappa | null | null | null | null | null |
3dur | D | C | 0 | D | carbohydrate | KDO | 3-DEOXY-D-MANNO-OCT-2-ULOSONIC ACID | IMMUNE SYSTEM | 07/17/08 | Crystal structure of SAG173-04 | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Brooks, C.L., Blackler, R.J., Gerstenbruch, S., Kosma, P., Muller-Loennies, S., Brade, H., Evans, S.V. | 1.86 | X-RAY DIFFRACTION | 0.247 | 0.178 | false | true | IGHV7 | IGKV8 | Kappa | null | null | null | null | null |
6ea7 | Q | R | 0 | null | null | null | null | VIRAL PROTEIN/immune system | 08/02/18 | Structure of EBOV GPcl in complex with the pan-ebolavirus mAb ADI-15878 | ZAIRE EBOLAVIRUS; EBOLA VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | null | West, B.R., Moyer, C.L., King, L.B., Fusco, M.L., Milligan, J.C., Hui, S., Saphire, E.O. | 4.25 | X-RAY DIFFRACTION | 0.324 | 0.280 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
1lil | null | A | 0 | null | null | null | null | IMMUNOGLOBULIN | 05/13/96 | BENCE JONES PROTEIN CLE, A LAMBDA III IMMUNOGLOBULIN LIGHT-CHAIN DIMER | HOMO SAPIENS | null | homo sapiens | null | Schiffer, M., Huang, D.B. | 2.65 | X-RAY DIFFRACTION | 0.340 | 0.190 | false | false | null | IGLV3 | Lambda | null | null | null | null | null |
4hkb | J | N | 0 | null | null | null | null | IMMUNE SYSTEM | 10/15/12 | CH67 Fab (unbound) from the CH65-67 Lineage | HOMO SAPIENS | homo sapiens | homo sapiens | null | Schmidt, A.G., Harrison, S.C. | 3.6 | X-RAY DIFFRACTION | 0.306 | 0.258 | false | true | IGHV1 | IGLV3 | Lambda | null | null | null | null | null |
6n16 | K | J | 0 | G | peptide | null | hiv fusion peptide (512-519) | IMMUNE SYSTEM | 11/08/18 | Vaccine-elicited NHP FP-targeting neutralizing antibody 0PV-b.01 in complex with HIV fusion peptide (residue 512-519) | PLATYRRHINI; SYNTHETIC CONSTRUCT | platyrrhini | platyrrhini | human immunodeficiency virus 1 | Xu, K., Wang, Y., Kwong, P.D. | 2.302 | X-RAY DIFFRACTION | 0.274 | 0.222 | false | true | IGHV4 | IGKV2 | Kappa | null | null | null | null | null |
7rth | P | O | 0 | null | null | null | null | IMMUNE SYSTEM | 08/13/21 | Crystal structure of an anti-lysozyme nanobody in complex with an anti-nanobody Fab ""NabFab"" | HOMO SAPIENS | homo sapiens | homo sapiens | null | Filippova, E.V., Mukherjee, S., Bloch, J.S., Locher, K.P., Kossiakoff, A.A. | 3.19 | X-RAY DIFFRACTION | 0.267 | 0.216 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
1k4d | A | B | 0 | C | protein | null | potassium channel kcsa | MEMBRANE PROTEIN | 10/07/01 | Potassium Channel KcsA-Fab complex in low concentration of K+ | STREPTOMYCES LIVIDANS; MUS MUSCULUS | mus musculus | mus musculus | streptomyces lividans | Zhou, Y., Morais-Cabral, J.H., Kaufman, A., MacKinnon, R. | 2.3 | X-RAY DIFFRACTION | 0.235 | 0.218 | false | false | IGHV1 | IGKV5 | Kappa | null | null | null | null | null |
6m3b | C | B | 0 | A | protein | null | vitamin k-dependent protein c heavy chain | BLOOD CLOTTING/IMMUNE SYSTEM | 03/03/20 | hAPC-c25k23 Fab complex | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Wang, X., Li, L., Zhao, X., Egner, U. | 2.2 | X-RAY DIFFRACTION | 0.248 | 0.218 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
6vep | U | V | 0 | W | protein | null | insulin receptor subunit alpha | HORMONE RECEPTOR/HORMONE/IMMUNE SYSTEM | 06/03/20 | Human insulin in complex with the human insulin microreceptor in turn in complex with Fv 83-7 | HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | Lawrence, M.C., Menting, J.G.T. | 2.9 | X-RAY DIFFRACTION | 0.225 | 0.193 | false | true | IGHV2 | IGKV8 | Kappa | null | null | null | null | null |
7jix | H | L | 0 | A | protein | null | hemagglutinin ha1 chain | Viral protein/IMMUNE SYSTEM | 07/23/20 | Murine antibody that engages the influenza hemagglutinin receptor binding site | INFLUENZA A VIRUS (A/SOLOMON ISLANDS/3/2006 (EGG PASSAGE)(H1N1)); INFLUENZA A VIRUS (A/MEXICO/UASLP-006/2008(H1N1)); MUS MUSCULUS | mus musculus | mus musculus | influenza a virus (a/solomon islands/3/2006(egg passage)(h1n1)) | Bajic, G., Schmidt, A.G. | 3.901 | X-RAY DIFFRACTION | 0.255 | 0.215 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
5t5n | I | H | 0 | A | protein | null | bestrophin-1 (best1) | MEMBRANE PROTEIN | 08/31/16 | Calcium-activated chloride channel bestrophin-1 (BEST1), triple mutant: I76A, F80A, F84A; in complex with an Fab antibody fragment, chloride, and calcium | GALLUS GALLUS; MUS MUSCULUS | mus musculus | mus musculus | gallus gallus | Long, S.B., Vaisey, G. | 3.1 | X-RAY DIFFRACTION | 0.243 | 0.218 | false | false | IGHV1 | IGKV12 | Kappa | null | null | null | null | null |
7a4d | B | null | 0 | F | peptide | null | aph coiled-coil | DE NOVO PROTEIN | 08/19/20 | Crystal structure of the APH coiled-coil in complex with nanobodies Nb28 and Nb30 | LAMA GLAMA; SYNTHETIC CONSTRUCT | lama glama | null | synthetic construct | Hadzi, S. | 2.694 | X-RAY DIFFRACTION | 0.223 | 0.177 | false | true | IGHV1 | null | null | null | null | null | null | null |
6opp | N | O | 0 | J | protein | null | envelope glycoprotein gp160 | VIRAL PROTEIN/Immune System | 04/25/19 | Asymmetric model of CD4- and 17-bound B41 HIV-1 Env SOSIP in complex with DDM | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Ozorowski, G., Torres, J.L., Ward, A.B. | 3.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6x04 | B | null | 0 | A | protein | null | nucleoporin nup133 | STRUCTURAL PROTEIN | 05/15/20 | Nup133 (aa55-481) from S. cerevisiae bound by VHH-SAN5 | SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C); VICUGNA PACOS | vicugna pacos | null | saccharomyces cerevisiae (strain atcc 204508 /s288c) | Nordeen, S.A., Schwartz, T.U. | 2.68 | X-RAY DIFFRACTION | 0.261 | 0.244 | false | true | IGHV1 | null | null | null | null | null | null | null |
7wed | H | L | 0 | E | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 12/23/21 | SARS-CoV-2 Omicron variant spike RBD in complex with Fab XGv347 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Wang, X., Wang, L. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6x3x | K | L | 0 | D | protein | null | gamma-aminobutyric acid receptor subunit alpha-1 | MEMBRANE PROTEIN | 05/21/20 | Human GABAA receptor alpha1-beta2-gamma2 subtype in complex with GABA plus diazepam | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Kim, J.J., Gharpure, A., Teng, J., Zhuang, Y., Howard, R.J., Zhu, S., Noviello, C.M., Walsh, R.M., Lindahl, E., Hibbs, R.E. | 2.92 | ELECTRON MICROSCOPY | null | null | false | false | IGHV14 | IGKV6 | Kappa | null | null | null | null | null |
7tn0 | H | G | 0 | I | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 01/20/22 | SARS-CoV-2 Omicron RBD in complex with human ACE2 and S304 Fab and S309 Fab | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Snell, G., McCallum, M., Veesler, D., Nix, J.C., Croll, T.I., Dillen, J.R., Czudnochowski, N. | 2.85 | X-RAY DIFFRACTION | 0.268 | 0.230 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7so9 | C | B | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 10/29/21 | SARS-CoV-2 S B.1.617.2 delta variant + S2M11 + S2L20 Global Refinement | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID) | 2.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
4lu5 | H | L | 0 | B | protein | null | a33r | IMMUNE SYSTEM | 07/24/13 | Structure of murine IgG2a A20G2-Fab in complex with vaccinia antigen A33R at the resolution of 2.9 Angstroms | MUS MUSCULUS; VACCINIA VIRUS | mus musculus | mus musculus | vaccinia virus | Matho, M.H., Schlossman, A.M., Zajonc, D.M. | 2.9 | X-RAY DIFFRACTION | 0.282 | 0.234 | false | true | IGHV5 | IGKV1 | Kappa | 0 | -13.889525 | SPR | null | TBD |
5hdb | H | L | 0 | A | protein | null | integrin alpha-iib | MEMBRANE PROTEIN/IMMUNE SYSTEM | 01/05/16 | Integrin alphaIIbbeta3 in complex with Ro-435054 | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Lin, F.Y. | 2.7012 | X-RAY DIFFRACTION | 0.238 | 0.212 | false | true | IGHV14 | IGKV14 | Kappa | null | null | null | null | null |
7vmu | A | a | 0 | B | protein | null | spike protein s1 | IMMUNE SYSTEM | 10/09/21 | Crystal Structure of SARS-CoV Spike Receptor-Binding Domain Complexed with Neutralizing Antibody | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | null | severe acute respiratory syndrome coronavirus2 | Guo, Y., Wang, W., Jiao, P., Yang, H., Rao, Z., Cheng, G. | 2.89 | X-RAY DIFFRACTION | 0.273 | 0.241 | true | true | unknown | unknown | unknown | null | null | null | null | null |
6qtl | E | null | 0 | E | Hapten | CFF | CAFFEINE | BIOSYNTHETIC PROTEIN | 04/10/19 | Caffeine recognizing nanobody | CAMELIDAE | camelidae | null | camelidae | Lesne, J., Guichou, J.F., Labesse, G., Cohen-Gonsaud, M. | 2.25 | X-RAY DIFFRACTION | 0.259 | 0.194 | false | true | IGHV1 | null | null | null | null | null | null | null |
3bz4 | H | G | 0 | H | carbohydrate | RAM | polysaccharide | IMMUNE SYSTEM | 01/17/08 | Crystal structure of Fab F22-4 in complex with a Shigella flexneri 2a O-Ag decasaccharide | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Saul, F.A., Vulliez-le-Normand, B., Bentley, G.A. | 1.8 | X-RAY DIFFRACTION | 0.230 | 0.176 | false | false | IGHV6 | IGKV2 | Kappa | null | null | null | null | null |
2uyl | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 04/10/07 | Crystal structure of a monoclonal antibody directed against an antigenic determinant common to Ogawa and Inaba serotypes of Vibrio cholerae O1 | MUS MUSCULUS | mus musculus | mus musculus | null | Ahmed, F., Haouz, A., Nato, F., Fournier, J.M., Alzari, P.M. | 2.5 | X-RAY DIFFRACTION | 0.257 | 0.211 | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7jhg | N | null | 0 | null | null | null | null | TRANSFERASE/IMMUNE SYSTEM | 07/20/20 | Cryo-EM structure of ATP-bound fully inactive AMPK in complex with Dorsomorphin (Compound C) and Fab-nanobody | HOMO SAPIENS; ESCHERICHIA COLI K-12; SYNTHETIC CONSTRUCT | synthetic construct | null | null | Yan, Y., Murkherjee, S., Zhou, X.E., Xu, T.H., Xu, H.E., Kossiakoff, A.A., Melcher, K. | 3.47 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
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