pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 354
values | r_factor stringclasses 342
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
4xgz | J | K | 0 | j | peptide | null | unknown | CELL ADHESION | 01/04/15 | Crystal structure of human paxillin LD2 motif in complex with Fab fragment | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | homo sapiens | Nocula-Lugowska, M., Lugowski, M., Salgia, R., Kossiakoff, A.A. | 2.5 | X-RAY DIFFRACTION | 0.245 | 0.228 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -10.395252 | Unknown | null | TBD |
4wht | I | J | 0 | i | peptide | null | unknown | VIRAL PROTEIN | 09/23/14 | Structure of the Hepatitis C virus envelope glycoprotein E2 antigenic region 412-423 bound to the broadly neutralizing antibody 3/11, P1 crystal form | HEPATITIS C VIRUS; RATTUS NORVEGICUS | rattus norvegicus | rattus norvegicus | hepatitis c virus | Krey, T., Rey, F.A. | 2.22 | X-RAY DIFFRACTION | 0.243 | 0.209 | false | true | IGHV5 | IGKV2 | Kappa | 0 | -11.053614 | Unknown | null | TBD |
7si0 | C | D | 0 | A | protein | null | ige fc | IMMUNE SYSTEM | 10/12/21 | IgE-Fc in complex with 813 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Pennington, L.F., Jardetzky, T.J., Kleinboelting, S. | 3.0 | X-RAY DIFFRACTION | 0.261 | 0.210 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6k2i | A | null | 6 | null | null | null | null | AFB1-BINDING PROTEIN | 05/14/19 | Solution structure of camelid nanobody Nb11 against aflatoxin B1 | VICUGNA PACOS | vicugna pacos | null | null | Nie, Y., Li, S.L., He, T., Zhu, J., Yang, Y.H. | NOT | SOLUTION NMR | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
3mlz | H | L | 0 | P | peptide | null | hiv-1 gp120 third variable region (v3) crown | IMMUNE SYSTEM | 04/18/10 | Crystal structure of anti-HIV-1 V3 Fab 3074 in complex with a VI191 V3 peptide | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Kong, X.-P. | 2.99 | X-RAY DIFFRACTION | 0.330 | 0.191 | false | false | IGHV4 | IGLV1 | Lambda | null | null | null | null | null |
6cjk | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 02/26/18 | Anti HIV Fab 10A | ORYCTOLAGUS CUNICULUS | oryctolagus cuniculus | oryctolagus cuniculus | null | Hangartner, L., Ward, A.B., Wilson, I.A., Oyen, D. | 1.795 | X-RAY DIFFRACTION | 0.206 | 0.163 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6oq5 | E | null | 0 | A | protein | null | toxin b | TOXIN | 04/25/19 | Structure of the full-length Clostridium difficile toxin B in complex with 3 VHHs | CLOSTRIDIOIDES DIFFICILE; CAMELIDAE | camelidae | null | clostridioides difficile | Chen, P., Lam, K., Jin, R. | 3.87 | X-RAY DIFFRACTION | 0.315 | 0.263 | false | true | unknown | unknown | unknown | null | null | null | null | null |
2p49 | B | null | 0 | A | protein | null | ribonuclease pancreatic | HYDROLASE/IMMUNE SYSTEM | 03/11/07 | Complex of a camelid single-domain vhh antibody fragment with RNASE A at 1.4A resolution: native mono_1 crystal form | CAMELUS DROMEDARIUS; BOS TAURUS | camelus dromedarius | null | bos taurus | Tereshko, V., Uysal, S., Margalef, K., Koide, A., Kossiakoff, A.A., Koide, S. | 1.38 | X-RAY DIFFRACTION | 0.185 | 0.156 | false | true | IGHV1 | null | null | 0 | -10.59 | Other | 30 | 17888451 |
4laj | M | null | 0 | F | G | protein | peptide | NA | NA | hiv-1 yu2 gp120 envelope glycoprotein | cd4-mimetic miniprotein m48u1 | VIRAL PROTEIN/INHIBITOR | 06/20/13 | Crystal structure of HIV-1 YU2 envelope gp120 glycoprotein in complex with CD4-mimetic miniprotein, M48U1, and llama single-domain, broadly neutralizing, co-receptor binding site antibody, JM4 | HUMAN IMMUNODEFICIENCY VIRUS 1; LLAMA GLAMA; SYNTHETIC CONSTRUCT | lama glama | null | human immunodeficiency virus 1 | | Acharya, P., Luongo, T.S., Kwong, P.D. | 2.14 | X-RAY DIFFRACTION | 0.227 | 0.185 | false | true | IGHV1 | null | null | null | null | null | null | null |
7f5g | B | null | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 06/22/21 | The crystal structure of RBD-Nanobody complex, DL4 (SA4) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; VICUGNA PACOS | vicugna pacos | null | severe acute respiratory syndrome coronavirus2 | Li, T., Lai, Y., Zhou, Y., Tan, J., Li, D. | 1.75 | X-RAY DIFFRACTION | 0.217 | 0.188 | false | true | IGHV1 | null | null | null | null | null | null | null |
7s2r | B | null | 0 | A | protein | null | cytokine receptor common subunit gamma | PROTEIN BINDING | 09/03/21 | nanobody bound to IL-2Rg | HOMO SAPIENS; CAMELUS BACTRIANUS | camelus bactrianus | null | homo sapiens | Glassman, C.R., Jude, K.M., Yen, M., Garcia, K.C. | 2.49 | X-RAY DIFFRACTION | 0.271 | 0.246 | false | true | IGHV1 | null | null | null | null | null | null | null |
7r6x | A | B | 0 | R | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 06/23/21 | SARS-CoV-2 spike receptor-binding domain (RBD) in complex with S2E12 Fab, S309 Fab, and S304 Fab | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Snell, G., Czudnochowski, N., Croll, T.I., Nix, J.C., Corti, D., Cameroni, E., Pinto, D., Beltramello, M. | 2.95 | X-RAY DIFFRACTION | 0.262 | 0.232 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
7mjk | D | E | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/Immune System | 04/20/21 | Cryo-EM structure of the SARS-CoV-2 N501Y mutant spike protein ectodomain bound to Fab ab1 (class 2) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; SYNTHETIC CONSTRUCT | synthetic construct | synthetic construct | severe acute respiratory syndrome coronavirus2 | Zhu, X., Mannar, D., Srivastava, S.S., Berezuk, A.M., Demers, J.P., Saville, J.W., Leopold, K., Li, W., Dimitrov, D.S., Tuttle, K.S., Zhou, S., Chittori, S., Subramaniam, S. | 2.73 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
4am0 | E | F | 0 | Q | protein | null | envelope protein, | VIRAL PROTEIN | 03/06/12 | Structure of Dengue virus strain 4 DIII in complex with Fab 2H12 | DENGUE VIRUS; HOMO SAPIENS, MUS MUSCULUS | homo sapiens, mus musculus | homo sapiens, mus musculus | dengue virus | Midgley, C.M., Flanagan, A., Mongkolsapaya, J., Grimes, J.M., Screaton, G.R. | 3.02 | X-RAY DIFFRACTION | 0.2522 | 0.1960 | false | false | IGHV1 | IGKV6 | Kappa | 0 | -12.792177 | ELISA | null | TBD |
6vjn | H | L | 0 | G | F | peptide | peptide | NA | NA | v2b peptide | v2b peptide | IMMUNE SYSTEM | 01/16/20 | Structure of NHP D11A.B5Fab in complex with 16055 V2b peptide | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | homo sapiens | homo sapiens | Singh, S., Liban, T.J., Pancera, M. | 2.0 | X-RAY DIFFRACTION | 0.236 | 0.180 | false | true | IGHV4 | IGLV6 | Lambda | null | null | null | null | null |
7vae | H | L | 0 | A | protein | null | solute carrier family 10 (sodium/bile acid cotransporterfamily), member 1 | TRANSPORT PROTEIN | 08/29/21 | Cryo-EM structure of bovine NTCP complexed with YN69202Fab | BOS TAURUS; MUS MUSCULUS | mus musculus | mus musculus | bos taurus | Asami, J., Shimizu, T., Ohto, U. | 3.55 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
7b14 | D | null | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 11/23/20 | Nanobody E bound to Spike-RBD in a localized reconstruction. | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; CAMELUS BACTRIANUS | camelus bactrianus | null | severe acute respiratory syndrome coronavirus2 | Hallberg, B.M., Das, H. | 3.79 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
7mxd | X | Y | 0 | F | protein | null | envelope glycoprotein gp120 | IMMUNE SYSTEM/VIRAL PROTEIN | 05/19/21 | Cryo-EM structure of broadly neutralizing V2-apex-targeting antibody J038 in complex with HIV-1 Env | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS; MACACA MULATTA | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | Zhou, T., Gao, F. | 3.4 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null |
3or7 | A | B | 0 | C | protein | null | voltage-gated potassium channel | IMMUNE SYSTEM/TRANSPORT PROTEIN | 09/06/10 | On the structural basis of modal gating behavior in K+channels - E71I | MUS MUSCULUS; STREPTOMYCES LIVIDANS | mus musculus | mus musculus | streptomyces lividans | Chakrapani, S., Cordero-Morales, J.F., Jogini, V., Pan, A.C., Cortes, D.M., Roux, B., Perozo, E. | 2.3 | X-RAY DIFFRACTION | 0.271 | 0.264 | false | false | IGHV1 | IGKV5 | Kappa | null | null | null | null | null |
4nko | B | A | 0 | null | null | null | null | IMMUNE SYSTEM/CHAPERONE | 11/12/13 | Crystal structure of engineered anti-EE scFv antibody fragment | MUS MUSCULUS | mus musculus | mus musculus | null | Kalyoncu, S., Hyun, J., Pai, J.C., Johnson, J.L., Etzminger, K., Jain, A., Heaner Jr., D., Molares, I.A., Truskett, T.M., Maynard, J.A., Lieberman, R.L. | 3.496 | X-RAY DIFFRACTION | 0.344 | 0.308 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
3okn | B | A | 0 | A | carbohydrate | KDO | polysaccharide | IMMUNE SYSTEM | 08/25/10 | Crystal structure of S25-39 in complex with Kdo(2.4)Kdo(2.4)Kdo | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Blackler, R.J., Evans, S.V. | 2.15 | X-RAY DIFFRACTION | 0.269 | 0.214 | false | false | IGHV7 | IGKV8 | Kappa | null | null | null | null | null |
6ccb | H | L | 0 | G | protein | null | glycoprotein 120 | VIRAL PROTEIN | 02/06/18 | Crystal structure of 253-11 SOSIP trimer in complex with 10-1074 Fab | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Moyo, T., Ereno-Orbea, J., Dorfman, J., Julien, J.P. | 6.5 | X-RAY DIFFRACTION | 0.366 | 0.298 | false | true | IGHV4 | unknown | unknown | null | null | null | null | null |
5j75 | A | a | 0 | b | Hapten | 6GQ | N,4-dimethyl-N-{2-oxo-2-[4-(pyridin-2-yl)piperazin-1-yl]ethyl}benzene-1-sulfonamide | IMMUNE SYSTEM | 04/05/16 | Fluorogen Activating Progein AM2.2 in complex with ML342 | HOMO SAPIENS | homo sapiens | null | null | Stanfield, R.L., Wilson, I.A., Wu, Y. | 2.0 | X-RAY DIFFRACTION | 0.263 | 0.221 | true | true | unknown | unknown | unknown | null | null | null | null | null |
4p48 | A | a | 0 | null | null | null | null | IMMUNE SYSTEM | 03/12/14 | The structure of a chicken anti-cardiac Troponin I scFv | GALLUS GALLUS | gallus gallus | null | null | Conroy, P.J., Law, R.H.P., Gillgunn, S., Hearty, S., Caradoc-Davies, T.T., Llyod, G., O'Kennedy, R.J., Whisstock, J.C. | 1.35 | X-RAY DIFFRACTION | 0.176 | 0.156 | true | true | unknown | unknown | unknown | null | null | null | null | null |
3r1g | H | L | 0 | B | protein | null | beta-secretase 1 | PROTEIN BINDING | 03/10/11 | Structure Basis of Allosteric Inhibition of BACE1 by an Exosite-Binding Antibody | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Wang, W., Rouge, L., Wu, P., Chiu, C., Chen, Y., Wu, Y., Watts, R.J. | 2.8 | X-RAY DIFFRACTION | 0.268 | 0.222 | false | false | IGHV3 | IGKV1 | Kappa | 0 | -12.12 | SPR | 25 | 21613622 |
6njm | P | O | 0 | D | protein | null | glutamate receptor 2 | MEMBRANE PROTEIN/Immune System | 01/03/19 | structure of a complex | MUS MUSCULUS; RATTUS NORVEGICUS | mus musculus | mus musculus | rattus norvegicus | Gouaux, E., Zhao, Y. | 6.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV2 | IGKV10 | Kappa | null | null | null | null | null |
4jzo | C | F | 0 | K | peptide | null | envelope glycoprotein e2 | immune system/viral protein | 04/03/13 | Three dimensional structure of broadly neutralizing human anti - Hepatitis C virus (HCV) glycoprotein E2 Fab fragment HC84-27 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | hepatitis c virus (isolate h) | Krey, T., Rey, F.A. | 2.22 | X-RAY DIFFRACTION | 0.236 | 0.196 | false | true | IGHV1 | IGLV3 | Lambda | null | null | null | null | null |
7rq6 | H | L | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 08/05/21 | Cryo-EM structure of SARS-CoV-2 spike in complex with non-neutralizing NTD-directed CV3-13 Fab isolated from convalescent individual | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Chen, Y., Pozharskiy, E., Tolbert, W.D., Pazgier, M. | 4.18 | ELECTRON MICROSCOPY | null | null | false | false | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
5h32 | K | L | 0 | B | protein | null | structural protein e | VIRUS/IMMUNE SYSTEM | 10/20/16 | Cryo-EM structure of zika virus complexed with Fab C10 at pH 5.0 | HOMO SAPIENS; ZIKA VIRUS | homo sapiens | homo sapiens | zika virus | Zhang, S., Kostyuchenko, V., Ng, T.-S., Lok, S.-M. | 12 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null |
3upc | H | null | 0 | null | null | null | null | IMMUNE SYSTEM | 11/17/11 | A general strategy for the generation of human antibody variable domains with increased aggregation resistance | HOMO SAPIENS | homo sapiens | null | null | Dudgeon, K., Rouet, R., Kokmeijer, I., Langley, D.B., Christ, D. | 2.8 | X-RAY DIFFRACTION | 0.247 | 0.209 | false | true | IGHV3 | null | null | null | null | null | null | null |
7nks | H | L | 0 | A | protein | null | envelope polyprotein | VIRAL PROTEIN | 02/18/21 | Structure of the Hantaan virus Gn glycoprotein ectodomain in complex with Fab HTN-Gn1 | HANTAAN ORTHOHANTAVIRUS; ORYCTOLAGUS CUNICULUS | oryctolagus cuniculus | oryctolagus cuniculus | hantaan orthohantavirus | Rissanen, I., Bowden, T.A., Huiskonen, J.T., Stass, R. | 3.5 | X-RAY DIFFRACTION | 0.274 | 0.224 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7nab | H | L | 0 | C | peptide | null | spike protein s2 | VIRAL PROTEIN/IMMUNE SYSTEM | 06/21/21 | Crystal structure of human neutralizing mAb CV3-25 binding to SARS-CoV-2 S MPER peptide 1140-1165 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Chen, Y., Tolbert, W.D., Pazgier, M. | 2.15 | X-RAY DIFFRACTION | 0.239 | 0.185 | false | true | IGHV5 | IGKV1 | Kappa | null | null | null | null | null |
3u0t | D | C | 0 | E | peptide | null | amyloid beta a4 protein | IMMUNE SYSTEM | 09/29/11 | Fab-antibody complex | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | homo sapiens | LaPorte, S.L., Pons, J.P. | 2.5 | X-RAY DIFFRACTION | 0.268 | 0.219 | false | true | IGHV1 | IGKV2D | Kappa | 0 | -12.991531 | Unknown | null | TBD |
7shz | I | J | 0 | G | protein | null | ige fc | IMMUNE SYSTEM | 10/11/21 | IgE-Fc in complex with HAE | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Pennington, L.F., Jardetzky, T.J., Kleinboelting, S. | 3.0 | X-RAY DIFFRACTION | 0.236 | 0.186 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5k8a | F | E | 0 | null | null | null | null | IMMUNE SYSTEM | 05/27/16 | NIST FAB | MUS MUSCULUS | mus musculus | mus musculus | null | Gallagher, D.T., Galvin, C.V., Karageorgos, I., Marino, J.P. | 1.999 | X-RAY DIFFRACTION | 0.189 | 0.164 | false | true | IGHV2 | IGKV1 | Kappa | null | null | null | null | null |
5vm4 | E | null | 0 | null | null | null | null | UNKNOWN FUNCTION | 04/26/17 | The apo form of the triclocarban-binding single domain camelid nanobody VHH T10 | LAMA GLAMA | lama glama | null | null | Tabares-da Rosa, S., Gonzalez-Sapienza, G., Wilson, D.K. | 1.9 | X-RAY DIFFRACTION | 0.241 | 0.197 | false | true | unknown | unknown | unknown | null | null | null | null | null |
5d9q | N | M | 0 | J | protein | null | envelope glycoprotein gp120 | IMMUNE SYSTEM | 08/18/15 | Crystal Structure of the BG505 SOSIP gp140 HIV-1 Env trimer in Complex with the Broadly Neutralizing Fab PGT122 and scFv NIH45-46 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Julien, J.-P., Stanfield, R.L., Ward, A.B., Wilson, I.A. | 4.4 | X-RAY DIFFRACTION | 0.320 | 0.290 | false | true | IGHV4 | IGLV3 | Lambda | null | null | null | null | null |
3m8o | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 03/18/10 | Human IgA1 Fab fragment | HOMO SAPIENS | homo sapiens | homo sapiens | null | Buschiazzo, A., Trajtenberg, F., Correa, A., Oppezzo, P., Pritsch, O., Dighiero, G. | 1.55 | X-RAY DIFFRACTION | 0.182 | 0.153 | false | false | IGHV3 | IGKV2 | Kappa | null | null | null | null | null |
5epm | E | F | 0 | D | peptide | null | beta-theraphotoxin-cm1a | TOXIN/IMMUNE SYSTEM | 11/11/15 | Ceratotoxin variant in complex with specific antibody Fab fragment | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | ceratogyrus marshalli | Strop, P., Shcherbatko, A., Rossi, A. | 1.75 | X-RAY DIFFRACTION | 0.219 | 0.190 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7kez | H | L | 0 | V | protein | null | isoform l-vegf206 of vascular endothelial growth factor a | IMMUNE SYSTEM | 10/13/20 | Crystal structure of bH1 Fab variant (CDR H3 loop design 16_0325) in complex with VEGF | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Shi, R., Manenda, M.S., Picard, M.-E. | 2.31 | X-RAY DIFFRACTION | 0.235 | 0.178 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
3u4b | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 10/07/11 | CH04H/CH02L Fab P4 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Pancera, M., Louder, R., Mclellan, J.S., KWong, P.D. | 2.893 | X-RAY DIFFRACTION | 0.268 | 0.221 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
3lrh | null | E | 0 | F | peptide | null | huntingtin | IMMUNE SYSTEM | 02/11/10 | Structure of anti-huntingtin VL domain in complex with huntingtin peptide | HOMO SAPIENS; SYNTHETIC CONSTRUCT | null | homo sapiens | null | Schiefner, A., Chatwell, L., Skerra, A. | 2.6 | X-RAY DIFFRACTION | 0.278 | 0.216 | false | true | null | IGLV1 | Lambda | 0 | -10.022811 | Unknown | null | TBD |
6qb3 | X | x | 0 | A | protein | null | induced myeloid leukemia cell differentiation protein mcl-1 | APOPTOSIS | 12/20/18 | Apo Mcl1 in a complex with a scFv | HOMO SAPIENS | homo sapiens | null | homo sapiens | Kazmirski, S., Hargreaves, D. | 1.9 | X-RAY DIFFRACTION | 0.205 | 0.172 | true | true | unknown | unknown | unknown | null | null | null | null | null |
1rzi | L | K | 0 | null | null | null | null | IMMUNE SYSTEM | 12/24/03 | Crystal structure of human anti-HIV-1 gp120-reactive antibody 47e fab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Huang, C.C., Venturi, M., Majeed, S., Moore, M.J., Phogat, S., Zhang, M.-Y., Dimitrov, D.S., Hendrickson, W.A., Robinson, J., Sodroski, J., Wyatt, R., Choe, H., Farzan, M., Kwong, P.D. | 2.9 | X-RAY DIFFRACTION | 0.321 | 0.233 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7jo8 | null | B | 0 | null | null | null | null | IMMUNE SYSTEM | 08/06/20 | Crystal structure of a Chimeric Antigen Receptor (CAR) scFv domain rearrangement forming a VL-VL dimer | SYNTHETIC CONSTRUCT | null | synthetic construct | null | Cheung, J., Hendrickson, W.A., Kochenderfer, J.N., Youkharibache, P. | 1.399 | X-RAY DIFFRACTION | 0.171 | 0.155 | true | true | null | IGKV3 | Kappa | null | null | null | null | null |
6apd | N | O | 0 | A | protein | null | fusion glycoprotein f0,envelope glycoprotein | IMMUNE SYSTEM | 08/17/17 | Crystal structure of RSV F bound by AM22 and the infant antibody ADI-19425 | RESPIRATORY SYNCYTIAL VIRUS; HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | respiratory syncytial virus, humanimmunodeficiency virus 1 | Wrapp, D., McLellan, J.S. | 4.1 | X-RAY DIFFRACTION | 0.256 | 0.204 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
7vdl | S | s | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 09/07/21 | Cryo-EM structure of pseudoallergen receptor MRGPRX2 complex with circular cortistatin-14 | HOMO SAPIENS | homo sapiens | null | homo sapiens | homo sapiens | Yu, L., Fang, Y. | 3.22 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
5k59 | H | L | 0 | A | protein | null | uncharacterized leukocidin-like protein 1 | IMMUNE SYSTEM | 05/23/16 | Crystal structure of LukGH from Staphylococcus aureus in complex with a neutralising antibody | STAPHYLOCOCCUS AUREUS (STRAIN USA300); HOMO SAPIENS | homo sapiens | homo sapiens | staphylococcus aureus (strain usa300) | WELIN, M., LOGAN, D.T., BADARAU, A., MIRKINA, I., ZAUNER, G., DOLEZILKOVA, I., NAGY, E. | 2.84 | X-RAY DIFFRACTION | 0.237 | 0.197 | false | true | IGHV4 | IGKV1 | Kappa | 0 | -15.828042 | SPR | null | TBD |
7kf0 | A | B | 0 | C | protein | null | isoform l-vegf206 of vascular endothelial growth factor a | IMMUNE SYSTEM | 10/13/20 | Crystal structure of bH1 Fab variant (CDR H3 loop design 13_0346) in complex with VEGF | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Shi, R., Picard, M.-E. | 2.32 | X-RAY DIFFRACTION | 0.246 | 0.192 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7mf7 | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 04/08/21 | Crystal structure of antibody 10E8v4-P100gA Fab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Kwon, Y.D., Kwong, P.D. | 2.0 | X-RAY DIFFRACTION | 0.231 | 0.203 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
5e2w | H | L | 0 | P | peptide | null | tau-phosphopeptide | IMMUNE SYSTEM | 10/01/15 | Anti-TAU AT8 FAB with triply phosphorylated TAU peptide | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | Malia, T., Teplyakov, A. | 1.5 | X-RAY DIFFRACTION | 0.220 | 0.216 | false | true | IGHV3 | IGKV2 | Kappa | 0 | -10.243615 | Unknown | null | TBD |
5wdu | O | P | 0 | F | protein | null | envelope glycoprotein gp160 | IMMUNE SYSTEM | 07/06/17 | HIV-1 Env BG505 SOSIP.664 H72C-H564C trimer in complex with bNAbs PGT122 Fab, 35O22 Fab and NIH45-46 scFv | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Julien, J.-P., Torrents de la Pena, A., Sanders, R.W., Wilson, I.A. | 7.0 | X-RAY DIFFRACTION | 0.363 | 0.301 | false | true | unknown | unknown | unknown | null | null | null | null | null |
6xyf | A | null | 0 | null | null | null | null | IMMUNE SYSTEM | 01/30/20 | Nanobody 22 | LAMA GLAMA | lama glama | null | null | Pompidor, G., Zimmermann, S., Loew, C., Schneider, T. | 1.11097 | X-RAY DIFFRACTION | 0.153 | 0.125 | false | true | IGHV1 | null | null | null | null | null | null | null |
2otw | D | C | 0 | F | peptide | null | poly-gln peptide antigen | IMMUNE SYSTEM | 02/09/07 | Crystal structure of Fv polyglutamine complex | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | null | Li, P. | 2.35 | X-RAY DIFFRACTION | 0.258 | 0.226 | false | true | IGHV5 | IGLV3 | Lambda | null | null | null | null | null |
7m30 | F | G | 0 | C | E | protein | protein | NA | NA | envelope protein ul128 | ul131a | VIRAL PROTEIN/IMMUNE SYSTEM | 03/17/21 | Cryo-EM structure of the HCMV pentamer bound by antibodies 1-103, 1-32 and 2-25 | HUMAN CYTOMEGALOVIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | human cytomegalovirus | human cytomegalovirus | Wrapp, D., McLellan, J.S. | 3.81 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV3 | Lambda | null | null | null | null | null |
3cxh | J | K | 0 | E | protein | null | cytochrome b-c1 complex subunit rieske,mitochondrial | OXIDOREDUCTASE | 04/24/08 | Structure of yeast complex III with isoform-2 cytochrome c bound and definition of a minimal core interface for electron transfer. | MUS MUSCULUS; SACCHAROMYCES CEREVISIAE | mus musculus | mus musculus | saccharomyces cerevisiae | Solmaz, S.R.N., Hunte, C. | 2.5 | X-RAY DIFFRACTION | 0.256 | 0.225 | false | true | IGHV3 | IGKV10 | Kappa | null | null | null | null | null |
6sxi | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 09/26/19 | Antibody-anti-idiotype complex: AP33 Fab (hepatitis C virus E2 antibody) - B2.1A scFv (anti-idiotype) | MUS MUSCULUS | mus musculus | mus musculus | null | Taylor, G.L., Potter, J.A., Fadda, V., Patel, A.H., Owsianka, A.M., Cowtan, V.M. | 1.85 | X-RAY DIFFRACTION | 0.203 | 0.156 | false | false | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
5e2v | H | L | 0 | P | peptide | null | tau phosphopeptide | IMMUNE SYSTEM | 10/01/15 | Anti-TAU AT8 FAB with doubly phosphorylated TAU peptide | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | Malia, T., Teplyakov, A. | 1.64 | X-RAY DIFFRACTION | 0.208 | 0.165 | false | true | IGHV3 | IGKV2 | Kappa | 0.000001 | -8.295148 | Unknown | null | TBD |
5lmj | D | null | 0 | null | null | null | null | IMMUNE SYSTEM | 08/01/16 | Llama nanobody PorM_19 | LAMA GLAMA | lama glama | null | null | Leone, P., Cambillau, C., Roussel, A. | 2.1 | X-RAY DIFFRACTION | 0.210 | 0.188 | false | true | IGHV1 | null | null | null | null | null | null | null |
5uz7 | N | null | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | SIGNALING PROTEIN | 02/24/17 | Volta phase plate cryo-electron microscopy structure of a calcitonin receptor-heterotrimeric Gs protein complex | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | homo sapiens | Liang, Y.L., Khoshouei, M., Radjainia, M., Zhang, Y., Glukhova, A., Tarrasch, J., Thal, D.M., Furness, S.G.B., Christopoulos, G., Coudrat, T., Danev, R., Baumeister, W., Miller, L.J., Christopoulos, A., Kobilka, B.K., Wootten, D., Skiniotis, G., Sexton, P.M. | 4.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null |
6x1t | E | F | 0 | Q | peptide | null | nm23-1-ptza peptide | IMMUNE SYSTEM | 05/19/20 | Structure of pHis Fab (SC50-3) in complex with pHis mimetic peptide | ORYCTOLAGUS CUNICULUS; SYNTHETIC CONSTRUCT | oryctolagus cuniculus | oryctolagus cuniculus | synthetic construct | Kalagiri, R., Stanfield, R.L., Wilson, I.A., Hunter, T. | 2.34 | X-RAY DIFFRACTION | 0.269 | 0.244 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7ldd | L | l | 0 | A | protein | null | glutamate receptor 1 | MEMBRANE PROTEIN/IMMUNE SYSTEM | 01/13/21 | native AMPA receptor | MUS MUSCULUS | mus musculus | null | mus musculus | Yu, J., Rao, P., Gouaux, E. | 3.4 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
6ol6 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 04/15/19 | Structure of iglb12 scFv in complex with anti-idiotype ib2 Fab | MUS MUSCULUS; HOMO SAPIENS | homo sapiens | homo sapiens | null | Weidle, C., Pancera, M., Gewe, M. | 2.6 | X-RAY DIFFRACTION | 0.231 | 0.171 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
4unt | null | C | 0 | null | null | null | null | IMMUNE SYSTEM | 05/30/14 | Induced monomer of the Mcg variable domain | HOMO SAPIENS | null | homo sapiens | null | Brumshtein, B., Esswein, S.R., Landau, M., Ryan, C.M., Whitelegge, J.P., Phillips, M.L., Cascio, D., Sawaya, M.R., Eisenberg, D.S. | 2.7 | X-RAY DIFFRACTION | 0.28925 | 0.24328 | false | true | null | IGLV2 | Lambda | null | null | null | null | null |
2ht2 | C | D | 0 | A | protein | null | h(+)/cl(-) exchange transporter clca | MEMBRANE PROTEIN | 07/25/06 | Structure of the Escherichia coli ClC chloride channel Y445H mutant and Fab complex | ESCHERICHIA COLI; MUS MUSCULUS | mus musculus | mus musculus | escherichia coli | Accardi, A., Lobet, S., Williams, C., Miller, C., Dutzler, R. | 3.32 | X-RAY DIFFRACTION | 0.305 | 0.270 | false | false | IGHV4 | IGKV4 | Kappa | null | null | null | null | null |
4jo1 | I | M | 0 | Q | peptide | null | gp120 | IMMUNE SYSTEM/VIRAL PROTEIN | 03/16/13 | Crystal structure of rabbit mAb R56 Fab in complex with V3 crown of HIV-1 JR-FL gp120 | ORYCTOLAGUS CUNICULUS; HUMAN IMMUNODEFICIENCY VIRUS 1 | oryctolagus cuniculus | oryctolagus cuniculus | human immunodeficiency virus 1 | Pan, R.M., Kong, X.P. | 2.033 | X-RAY DIFFRACTION | 0.223 | 0.181 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7r9d | H | L | 0 | null | null | null | null | PROTEIN BINDING | 06/29/21 | Crystal structure of Nb_0 in complex with Fab_8D3 | MUS MUSCULUS; VICUGNA PACOS | mus musculus | mus musculus | null | Wu, X.D., Rapoport, T.A. | 1.83 | X-RAY DIFFRACTION | 0.211 | 0.180 | false | true | IGHV5 | IGKV8 | Kappa | null | null | null | null | null |
6wx2 | H | L | 0 | F | peptide | null | fusion peptide | IMMUNE SYSTEM/VIRAL PROTEIN | 05/09/20 | Vaccine-elicited mouse FP-targeting neutralizing antibody vFP16.02 with F60P mutation on light chain in complex with HIV fusion peptide (residue 512-519) | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | human immunodeficiency virus 1 | Xu, K., Wang, Y., Kwong, P.D. | 2.39 | X-RAY DIFFRACTION | 0.250 | 0.200 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6tyb | H | L | 0 | G | protein | null | envelope glycoprotein gp160 | IMMUNE SYSTEM | 08/08/19 | Isolation and Structure of an Antibody that Fully Neutralizes Isolate SIVmac239 Reveals Functional Similarity of SIV and HIV Glycan Shields | SIMIAN IMMUNODEFICIENCY VIRUS; MACACA MULATTA | macaca mulatta | macaca mulatta | simian immunodeficiency virus | Gorman, J., Kwong, P.D. | 2.301 | X-RAY DIFFRACTION | 0.210 | 0.178 | false | true | IGHV5 | IGKV1 | Kappa | null | null | null | null | null |
7jv6 | H | L | 0 | A | protein | null | sars-cov-2 spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 08/20/20 | SARS-CoV-2 spike in complex with the S2H13 neutralizing antibody (closed conformation) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Park, Y.J., Tortorici, M.A., Walls, A.C., Czudnochowski, N., Seattle Structural Genomics Center for Infectious Disease (SSGCID), Snell, G., Veesler, D. | 3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV7 | Lambda | null | null | null | null | null |
7mjk | F | G | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN/Immune System | 04/20/21 | Cryo-EM structure of the SARS-CoV-2 N501Y mutant spike protein ectodomain bound to Fab ab1 (class 2) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; SYNTHETIC CONSTRUCT | synthetic construct | synthetic construct | severe acute respiratory syndrome coronavirus2 | Zhu, X., Mannar, D., Srivastava, S.S., Berezuk, A.M., Demers, J.P., Saville, J.W., Leopold, K., Li, W., Dimitrov, D.S., Tuttle, K.S., Zhou, S., Chittori, S., Subramaniam, S. | 2.73 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
6cbp | A | a | 0 | P | peptide | null | man9-v3 glycopeptide | IMMUNE SYSTEM | 02/03/18 | Crystal structure of the single chain variable fragment of the DH270.6 bnAb in complex with the Man9-V3 glycopeptide | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | null | human immunodeficiency virus 1 | Fera, D., Harrison, S.C. | 2.17 | X-RAY DIFFRACTION | 0.278 | 0.221 | true | true | unknown | unknown | unknown | 0.000007 | -7.032545 | Unknown | null | TBD |
4xcy | H | L | 0 | H | Hapten | 44G | (2S)-3-{[(R)-{[(2R)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-2-(hexanoyloxy)propyl hexanoate | IMMUNE SYSTEM | 12/18/14 | Crystal structure of human 4E10 Fab in complex with phosphatidylglycerol (06:0 PG) | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Irimia, A., Stanfield, R.L., Wilson, I.A. | 3.96 | X-RAY DIFFRACTION | 0.291 | 0.244 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
3mme | C | D | 0 | D | carbohydrate | NAG | polysaccharide | IMMUNE SYSTEM | 04/19/10 | Structure and functional dissection of PG16, an antibody with broad and potent neutralization of HIV-1 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Pancera, M., McLellan, J., Zhou, T., Zhu, J., Kwong, P. | 3.97 | X-RAY DIFFRACTION | 0.317 | 0.256 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
7mxd | S | U | 0 | G | protein | null | envelope glycoprotein gp120 | IMMUNE SYSTEM/VIRAL PROTEIN | 05/19/21 | Cryo-EM structure of broadly neutralizing V2-apex-targeting antibody J038 in complex with HIV-1 Env | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS; MACACA MULATTA | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Zhou, T., Gao, F. | 3.4 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null |
7jmx | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 08/03/20 | Crystal structure of a SARS-CoV-2 cross-neutralizing antibody COVA1-16 Fab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Liu, H., Yuan, M., Zhu, X., Wu, N.C., Wilson, I.A. | 2.53 | X-RAY DIFFRACTION | 0.244 | 0.212 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7so9 | J | I | 0 | F | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 10/29/21 | SARS-CoV-2 S B.1.617.2 delta variant + S2M11 + S2L20 Global Refinement | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID) | 2.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6m1i | C | null | 0 | F | E | protein | protein | NA | NA | guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | PROTEIN BINDING | 02/26/20 | CryoEM structure of human PAC1 receptor in complex with PACAP38 | HOMO SAPIENS; LAMA GLAMA; SYNTHETIC CONSTRUCT | lama glama | null | homo sapiens | homo sapiens | Song, X., Wang, J., Zhang, D., Wang, H.W., Ma, Y. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null |
5vta | K | J | 0 | A | protein | null | dipeptidyl peptidase 4 | HYDROLASE | 05/16/17 | Co-Crystal Structure of DPPIV with a Chemibody Inhibitor | RATTUS NORVEGICUS; MUS MUSCULUS | mus musculus | mus musculus | rattus norvegicus | Wang, Z., Johnstone, S., Cheng, A. | 2.8 | X-RAY DIFFRACTION | 0.300 | 0.250 | false | true | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
4nzr | H | L | 0 | M | protein | null | protein m td | IMMUNE SYSTEM/PROTEIN BINDING | 12/12/13 | Crystal structure of the antibody-binding region of Protein M (Protein M TD) in complex with anti-HIV antibody PGT135 Fab | HOMO SAPIENS; MYCOPLASMA GENITALIUM | homo sapiens | homo sapiens | mycoplasma genitalium | Zhu, X., Wilson, I.A. | 1.65 | X-RAY DIFFRACTION | 0.186 | 0.154 | false | true | IGHV4 | IGKV3 | Kappa | null | null | null | null | null |
5t0y | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 08/17/16 | 2A10 Antibody FAB fragment | MUS MUSCULUS | mus musculus | mus musculus | null | Jackson, C.J., Fisher, C. | 3.011 | X-RAY DIFFRACTION | 0.247 | 0.225 | false | true | IGHV9 | IGKV10 | Kappa | null | null | null | null | null |
3whe | 1 | 2 | 0 | H | protein | null | hemagglutinin | VIRAL PROTEIN/IMMUNE SYSTEM | 08/25/13 | A new conserved neutralizing epitope at the globular head of hemagglutinin in H3N2 influenza viruses | INFLUENZA A VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus | Fujii, Y., Sumida, T., Shirouzu, M., Yokoyama, S. | 4.0 | X-RAY DIFFRACTION | 0.308 | 0.235 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
4ybq | F | E | 0 | A | protein | null | solute carrier family 2, facilitated glucose transportermember 5 | TRANSPORT PROTEIN/IMMUNE SYSTEM | 02/19/15 | Rat GLUT5 with Fv in the outward-open form | MUS MUSCULUS; RATTUS NORVEGICUS | mus musculus | mus musculus | rattus norvegicus | Nomura, N., Shimamura, T., Iwata, S. | 3.27 | X-RAY DIFFRACTION | 0.288 | 0.242 | false | true | IGHV5 | IGKV1 | Kappa | null | null | null | null | null |
5eor | H | L | 0 | A | peptide | null | protein a27 | VIRAL PROTEIN/IMMUNE SYSTEM | 11/10/15 | Structure of the murine antibody Fab 8E3 bound to the vaccinia virus A27 peptide 101-110 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | vaccinia virus | Matho, M.H., Zajonc, D.M. | 2.27 | X-RAY DIFFRACTION | 0.224 | 0.203 | false | false | IGHV2 | IGLV3 | Lambda | null | null | null | null | null |
2ltq | F | E | 3 | D | protein | null | disulfide bond formation protein b | MEMBRANE PROTEIN, OXIDOREDUCTASE | 05/30/12 | High resolution structure of DsbB C41S by joint calculation with solid-state NMR and X-ray data | ESCHERICHIA COLI; MUS MUSCULUS | mus musculus | mus musculus | escherichia coli | Tang, M., Sperling, L.J., Schwieters, C.D., Nesbitt, A.E., Gennis, R.B., Rienstra, C.M. | NOT | SOLID-STATE NMR | null | null | false | false | IGHV5 | IGKV8 | Kappa | null | null | null | null | null |
6w0g | A | B | 0 | C | protein | null | ph-gated potassium channel kcsa | MEMBRANE PROTEIN | 02/29/20 | Closed-gate KcsA soaked in 1mM KCl/5mM BaCl2 | RATTUS NORVEGICUS; STREPTOMYCES LIVIDANS | rattus norvegicus | rattus norvegicus | streptomyces lividans | Rohaim, A., Gong, L., Li, J. | 2.6 | X-RAY DIFFRACTION | 0.245 | 0.196 | false | true | IGHV1 | IGKV5 | Kappa | null | null | null | null | null |
5uk4 | g | null | 0 | G | protein | null | anti-vesicular stomatitis virus n vhh | Viral Protein/RNA/Immune System | 01/19/17 | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | VESICULAR STOMATITIS INDIANA VIRUS (STRAIN SAN JUAN); VICUGNA PACOS | vicugna pacos | null | vesicular stomatitis indiana virus (strain sanjuan) | Hanke, L., Knockenhauer, K.E., Ploegh, H.L., Schwartz, T.U. | 3.204 | X-RAY DIFFRACTION | 0.288 | 0.237 | false | false | IGHV1 | null | null | null | null | null | null | null |
4lsv | H | L | 0 | G | protein | null | envelope glycoprotein gp120 | viral protein/immune system | 07/23/13 | Crystal structure of broadly and potently neutralizing antibody 3BNC117 in complex with HIV-1 clade C C1086 gp120 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Zhou, T., Moquin, S., Kwong, P.D. | 3.0 | X-RAY DIFFRACTION | 0.299 | 0.260 | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null |
1h8s | B | b | 0 | null | null | null | null | ANTI-AMPICILLIN ANTIBODIES | 02/15/01 | Three-dimensional structure of anti-ampicillin single chain Fv fragment complexed with the hapten. | MUS MUSCULUS | mus musculus | null | null | Burmester, J., Spinelli, S., Pugliese, L., Krebber, A., Honegger, A., Jung, S., Schimmele, B., Cambillau, C., Plucktun, A. | 2.4 | X-RAY DIFFRACTION | 0.273 | 0.204 | true | true | unknown | unknown | unknown | 0.000002 | -7.929641 | Unknown | null | TBD |
3qum | D | C | 0 | Q | protein | null | prostate-specific antigen | IMMUNE SYSTEM | 02/24/11 | Crystal structure of human prostate specific antigen (PSA) in Fab sandwich with a high affinity and a PCa selective antibody | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Stura, E.A., Muller, B.H., Michel, S., Ducancel, F. | 3.2 | X-RAY DIFFRACTION | 0.294 | 0.198 | false | false | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6axl | D | C | 0 | G | peptide | null | peptide ace-asn-pro-asn-ala-asn-pro-asn-ala-asn-pro-asn-ala-nh2 | IMMUNE SYSTEM | 09/07/17 | Crystal structure of Fab317 complex | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | plasmodium falciparum | Oyen, D., Wilson, I.A. | 2.4 | X-RAY DIFFRACTION | 0.217 | 0.175 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -9.696918 | Unknown | null | TBD |
7doh | H | L | 0 | I | peptide | null | gly-thr-gly-ala-thr-pro-ala-asp-asp | IMMUNE SYSTEM | 12/14/20 | Crystal Structure of GD-26 Fab in Complex with TD Peptide from Haloarcula Marismortui Bacteriorhodopsin I | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | haloarcula marismortui | Lee, C.C., Pao, P.J., Wang, A.H.J. | 1.45 | X-RAY DIFFRACTION | 0.178 | 0.130 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6cw3 | A | B | 0 | H | G | protein | protein | NA | NA | histone acetyltransferase gcn5 | transcriptional adapter 2 | GENE REGULATION | 03/29/18 | Crystal structure of a yeast SAGA transcriptional coactivator Ada2/Gcn5 HAT subcomplex, crystal form 2 | HOMO SAPIENS; SACCHAROMYCES CEREVISIAE S288C | homo sapiens | homo sapiens | saccharomyces cerevisiae s288c | saccharomyces cerevisiae s288c | Sun, J., Paduch, M., Kim, S.A., Kramer, R.M., Barrios, A.F., Lu, V., Luke, J., Usatyuk, S., Kossiakoff, A.A., Tan, S. | 1.98 | X-RAY DIFFRACTION | 0.227 | 0.203 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7kdd | H | I | 0 | C | protein | null | envelope glycoprotein b | VIRAL PROTEIN/IMMUNE SYSTEM | 10/08/20 | HCMV postfusion gB in complex with SM5-1 Fab | HOMO SAPIENS; HUMAN CYTOMEGALOVIRUS (STRAIN TOWNE) | homo sapiens | homo sapiens | human cytomegalovirus (strain towne) | Liu, Y., Heim, P.K., Che, Y., Chi, X., Qiu, X., Han, S., Dormitzer, P.R., Yang, X. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
7nx6 | A | B | 0 | E | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 03/17/21 | Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-222 and EY6A Fabs | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, D., Ren, J., Stuart, D. | 2.25 | X-RAY DIFFRACTION | 0.248 | 0.207 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
7tfn | P | Q | 0 | C | protein | null | envelope glycoprotein bg505 sosip.664 - gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 01/06/22 | Cryo-EM structure of CD4bs antibody Ab1303 in complex with HIV-1 Env trimer BG505 SOSIP.664 | HUMAN IMMUNODEFICIENCY VIRUS 1; MACACA MULATTA | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | Yang, Z., Bjorkman, P.J. | 4.0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGLV4 | Lambda | null | null | null | null | null |
1iqd | B | A | 0 | C | protein | null | human factor viii | IMMUNE SYSTEM/BLOOD CLOTTING | 07/21/01 | Human Factor VIII C2 Domain complexed to human monoclonal BO2C11 Fab. | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Spiegel Jr., P.C., Jacquemin, M., Saint-Remy, J.M., Stoddard, B.L., Pratt, K.P. | 2.0 | X-RAY DIFFRACTION | 0.253 | 0.203 | false | false | IGHV1 | IGKV3 | Kappa | 0 | -14.8 | SPR | null | 9657749 |
6pdx | O | P | 0 | C | protein | null | hemagglutinin | IMMUNE SYSTEM | 06/19/19 | Crystal structure of C585 Fab in complex with influenza virus hemagglutinin from A/Switzerland/9715293/2013 (H3N2) | INFLUENZA A VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus | Qiu, Y., Zhou, Y. | 3.993 | X-RAY DIFFRACTION | 0.242 | 0.212 | false | true | IGHV4 | IGLV1 | Lambda | null | null | null | null | null |
7lq7 | F | G | 0 | E | protein | null | spike protein s1 | IMMUNE SYSTEM | 02/13/21 | Crystal structure of SARS-CoV-2 receptor binding domain in complex with antibodies CV503 and COVA1-16 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Yuan, M., Zhu, X., Wilson, I.A. | 3.4 | X-RAY DIFFRACTION | 0.233 | 0.197 | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null |
7beo | E | F | 0 | X | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 12/24/20 | Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in a ternary complex with COVOX-253H55L and COVOX-75 Fabs | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, D., Zhao, Y., Ren, J., Stuart, D. | 3.19 | X-RAY DIFFRACTION | 0.274 | 0.234 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
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