pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 354
values | r_factor stringclasses 342
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
6k6b | null | A | 0 | B | protein | null | protein a | STRUCTURAL PROTEIN | 06/02/19 | Application of anti-helix antibodies in protein structure determination (8496-3LRH) | HOMO SAPIENS; STAPHYLOCOCCUS AUREUS | null | homo sapiens | staphylococcus aureus | Lee, J.O., Jin, M.S., Kim, J.W., Kim, S., Lee, H., Cho, G.Y. | 2.06 | X-RAY DIFFRACTION | 0.248 | 0.202 | false | true | null | IGLV1 | Lambda | null | null | null | null | null |
6pk8 | B | b | 0 | null | null | null | null | IMMUNE SYSTEM | 06/28/19 | Antibody scFv-M204 dimeric state | ORYCTOLAGUS CUNICULUS | oryctolagus cuniculus | null | null | Abskharon, R., Sawaya, M.R., Seidler, P.M., Cascio, D., Eisenberg, D.S. | 2.91 | X-RAY DIFFRACTION | 0.238 | 0.186 | true | true | unknown | unknown | unknown | null | null | null | null | null |
7eq1 | S | s | 0 | A | Y | B | protein | protein | protein | NA | NA | NA | gs protein alpha subunit | guanine nucleotide-binding protein g(i)/g(s)/g(o) subunitgamma-2 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | STRUCTURAL PROTEIN | 04/28/21 | GPR114-Gs-scFv16 complex | BOS TAURUS; HOMO SAPIENS; SYNTHETIC CONSTRUCT; RATTUS NORVEGICUS | synthetic construct | null | bos taurus | bos taurus | rattus norvegicus | Ping, Y. | 3.3 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
7czu | J | N | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN | 09/09/20 | S protein of SARS-CoV-2 in complex bound with P5A-1B6_2B | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Yan, R.H., Zhang, Y.Y., Li, Y.N., Zhou, Q. | 3.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
2kh2 | B | b | 29 | A | protein | null | interleukin-1 beta | Cytokine/IMMUNE SYSTEM | 03/23/09 | Solution structure of a scFv-IL-1B complex | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | Wilkinson, I.C., Hall, C.J., Veverka, V., Muskett, F.W., Stephens, P.E., Taylor, R.J., Henry, A.J., Carr, M.D. | NOT | SOLUTION NMR | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
5o14 | C | D | 0 | B | protein | null | factor h binding protein variant 1.1 | IMMUNE SYSTEM | 05/18/17 | Co-crystal structure of a cross-reactive bactericidal human antibody targeting meningococcal vaccine antigen factor H binding protein | NEISSERIA MENINGITIDIS SEROGROUP B (STRAIN MC58); HOMO SAPIENS | homo sapiens | homo sapiens | neisseria meningitidis serogroup b (strainmc58) | Lopez-Sagaseta, J. | 2.195 | X-RAY DIFFRACTION | 0.250 | 0.192 | false | true | IGHV5 | IGKV1 | Kappa | null | null | null | null | null |
1fdl | H | L | 0 | Y | protein | null | hen egg white lysozyme | COMPLEX (ANTIBODY-ANTIGEN) | 08/27/90 | CRYSTALLOGRAPHIC REFINEMENT OF THE THREE-DIMENSIONAL STRUCTURE OF THE FAB D1.3-LYSOZYME COMPLEX AT 2.5-ANGSTROMS RESOLUTION | MUS MUSCULUS; GALLUS GALLUS | mus musculus | mus musculus | gallus gallus | Fischmann, T.O., Poljak, R.J. | 2.5 | X-RAY DIFFRACTION | unknown | 0.184 | false | true | IGHV2 | IGKV12 | Kappa | null | null | null | null | null |
6bli | J | K | 0 | L | peptide | null | major surface glycoprotein g | VIRAL PROTEIN/IMMUNE SYSTEM | 11/10/17 | RSV G peptide bound to Fab CB002.5 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human respiratory syncytial virus a (strainrsb6256) | Jones, H.G., McLellan, J.S., Langedijk, J.P. | 2.12 | X-RAY DIFFRACTION | 0.218 | 0.169 | false | true | IGHV4 | IGKV1 | Kappa | 0 | -12.665638 | Unknown | null | TBD |
4gsd | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 08/27/12 | H5.3 Fab Structure | HOMO SAPIENS | homo sapiens | homo sapiens | null | Spiller, B.W, Winarski, K.L. | 2.251 | X-RAY DIFFRACTION | 0.203 | 0.172 | false | true | IGHV4 | IGLV3 | Lambda | null | null | null | null | null |
6x5m | H | L | 0 | R | nucleic-acid | null | ggpan rna (39-mer) | Immune System/RNA | 05/26/20 | Crystal structure of a stabilized PAN ENE bimolecular triplex with a GC-clamped polyA tail | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | synthetic construct | Swain, M., Li, M., Wlodawer, A., Le Grice, S.F.J. | 2.5 | X-RAY DIFFRACTION | 0.279 | 0.207 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7zwm | I | J | 0 | F | protein | null | gametocyte surface protein p45/48 | CELL ADHESION | 05/19/22 | Pfs48/45 central and C-terminal domains bound to Fab fragments of monoclonal antibody 10D8 and 32F3 | Mus musculus; Plasmodium falciparum | mus musculus | mus musculus | plasmodium falciparum | Ko, K.T., Lennartz, F.L., Higgins, M.K. | 3.69 | X-RAY DIFFRACTION | 0.280 | 0.255 | false | true | IGHV5 | IGKV8 | Kappa | null | null | null | null | null |
7ul7 | E | D | 0 | c | protein | null | unknown | VIRAL PROTEIN/IMMUNE SYSTEM | 04/04/22 | Lineage I (Pinneo) Lassa virus glycoprotein bound to 18.5C-M30 Fab | LASSA MAMMARENAVIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | lassa mammarenavirus | Buck, T.K., Enriquez, A.S., Hastie, K.M. | 3.59 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
5f7n | C | null | 0 | A | protein | null | adhesin binding fucosylated histo-blood group antigen | CELL ADHESION | 12/08/15 | Blood group antigen binding adhesin BabA of Helicobacter pylori strain 17875 in complex with blood group A Lewis b pentasaccharide | HELICOBACTER PYLORI | helicobacter pylori | null | helicobacter pylori | Moonens, K., Gideonsson, P., Subedi, S., Romao, E., Oscarson, S., Muyldermans, S., Boren, T., Remaut, H. | 2.28 | X-RAY DIFFRACTION | 0.197 | 0.171 | false | true | IGHV1 | null | null | null | null | null | null | null |
6vca | P | O | 0 | D | protein | null | 5'-nucleotidase, ecto (cd73), isoform cra_a | IMMUNE SYSTEM | 12/20/19 | TB38 complex | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Zhou, Y.F., Lord, D.M. | 3.73 | X-RAY DIFFRACTION | 0.264 | 0.224 | false | true | IGHV3 | IGLV8 | Lambda | null | null | null | null | null |
1ngq | H | L | 0 | null | null | null | null | IMMUNOGLOBULIN | 06/23/95 | N1G9 (IGG1-LAMBDA) FAB FRAGMENT | MUS MUSCULUS | mus musculus | mus musculus | null | Mizutani, R., Satow, Y. | 2.4 | X-RAY DIFFRACTION | 0.254 | 0.194 | false | false | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
6h0e | E | F | 0 | J | peptide | null | microtubule-associated protein tau | IMMUNE SYSTEM | 07/09/18 | FAB dmCBTAU-22.1 IN COMPLEX WITH TAU PEPTIDE V1088-23 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | mus musculus | Juraszek, J., Steinbacher, S. | 1.95 | X-RAY DIFFRACTION | 0.285 | 0.222 | false | true | IGHV1 | IGKV2 | Kappa | 0 | -9.031008 | Unknown | null | TBD |
7det | B | b | 0 | A | protein | null | spike protein s1 | VIRAL PROTEIN/ANTIVIRAL PROTEIN | 11/05/20 | Crystal structure of SARS-CoV-2 RBD in complex with a neutralizing antibody scFv | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS | mus musculus | null | severe acute respiratory syndrome coronavirus2 | Wang, Y., Zhang, G., Li, X., Rao, Z., Guo, Y. | 2.2 | X-RAY DIFFRACTION | 0.260 | 0.212 | true | true | unknown | unknown | unknown | null | null | null | null | null |
6q1z | D | C | 0 | B | protein | null | neuraminidase | VIRAL PROTEIN,HYDROLASE/IMMUNE SYSTEM | 08/06/19 | Crystal structure of human 1G04 Fab in complex with influenza virus neuraminidase from A/Hunan/02650/2016 (H7N9) | INFLUENZA A VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus | Zhu, X., Wilson, I.A. | 3.446 | X-RAY DIFFRACTION | 0.247 | 0.197 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7bpk | H | L | 0 | B | protein | null | envelope protein | VIRAL PROTEIN/IMMUNE SYSTEM | 03/23/20 | Zika virus envelope protein mutant bound to mAb | ZIKA VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | zika virus | Dai, L., Qi, J., Gao, G.F. | 3.1 | X-RAY DIFFRACTION | 0.268 | 0.232 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
4qyo | A | B | 0 | Q | peptide | null | merozoite surface antigen 2 | IMMUNE SYSTEM | 07/24/14 | Crystal Structure of anti-MSP2 Fv fragment (mAb6D8)in complex with MSP2 14-22 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | plasmodium falciparum k1 | Morales, R.A.V., MacRaild, C.A., Seow, J., Bankala, K., Drinkwater, N., McGowan, S., Rouet, R., Christ, D., Anders, R.F., Norton, R.S. | 1.208 | X-RAY DIFFRACTION | 0.170 | 0.151 | false | true | IGHV14 | IGKV3 | Kappa | 0 | -11.216609 | Unknown | null | TBD |
5d96 | J | I | 0 | D | protein | null | sulfhydryl oxidase 1 | IMMUNE SYSTEM | 08/18/15 | Oxidoreductase Fragment of Mouse QSOX1 in Complex with a FAb Fragment from an Antibody Targeting Mouse and Human QSOX1 | OTHER SEQUENCES; MUS MUSCULUS | other sequences | other sequences | mus musculus | Fass, D., Grossman, I. | 2.3 | X-RAY DIFFRACTION | 0.228 | 0.167 | false | true | IGHV2 | IGKV6 | Kappa | null | null | null | null | null |
2v7h | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 07/30/07 | Crystal structure of an immunogen specific anti-mannopyranoside monoclonal antibody Fab fragment | MUS MUSCULUS | mus musculus | mus musculus | null | Krishnan, L., Sahni, G., Kaur, K.J., Salunke, D.M. | 2.8 | X-RAY DIFFRACTION | 0.2676 | 0.2424 | false | false | IGHV1 | IGKV10 | Kappa | null | null | null | null | null |
4org | E | F | 0 | null | null | null | null | IMMUNE SYSTEM | 02/11/14 | Crystal structure of human Fab CAP256-VRC26.04, a potent V1V2-directed HIV-1 neutralizing antibody | HOMO SAPIENS | homo sapiens | homo sapiens | null | Gorman, J., Doria-Rose, N.A., Schramm, C.A., Moore, P.L., Mascola, J.R., Shapiro, L., Morris, L., Kwong, P.D. | 3.121 | X-RAY DIFFRACTION | 0.289 | 0.275 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
7xod | U | V | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 05/01/22 | SARS-CoV-2 Omicron BA.2 Variant Spike Trimer with three JMB2002 Fab Bound | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS; LAMA GLAMA | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Xu, Y., Wu, C., Liu, H., Yin, W., Xu, H.E. | 3.27 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7p5v | K | null | 0 | E | protein | null | volume-regulated anion channel subunit lrrc8a | MEMBRANE PROTEIN | 07/15/21 | Structure of homomeric LRRC8A Volume-Regulated Anion Channel in complex with synthetic nanobody Sb1 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | synthetic construct | null | mus musculus | Deneka, D., Rutz, S., Sawicka, M. | 3.06 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
5uxq | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 02/23/17 | Structure of anti-HIV trimer apex antibody PGT143 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Kong, L., Wilson, I.A. | 2.415 | X-RAY DIFFRACTION | 0.267 | 0.229 | false | true | IGHV1 | IGKV2 | Kappa | null | null | null | null | null |
5uqy | L | K | 0 | I | N | protein | protein | NA | NA | envelope glycoprotein gp1 | envelope glycoprotein gp2 | VIRAL PROTEIN/IMMUNE SYSTEM | 02/08/17 | Crystal structure of Marburg virus GP in complex with the human survivor antibody MR78 | LAKE VICTORIA MARBURGVIRUS (STRAIN RAVN-87); HOMO SAPIENS | homo sapiens | homo sapiens | lake victoria marburgvirus (strain ravn-87) | lake victoria marburgvirus (strain ravn-87) | Hashiguchi, T., Fusco, M.L., Hastie, K.M., Bomholdt, Z.A., Lee, J.E., Flyak, A.I., Matsuoka, R., Kohda, D., Yanagi, Y., Hammel, M., Crowe, J.E., Saphire, E.O. | 3.6 | X-RAY DIFFRACTION | 0.262 | 0.221 | false | false | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
6elu | E | F | 0 | D | protein | null | serum resistance associated; vsg protein | ANTITOXIN | 09/29/17 | Structure of Serum Resistance Associated protein from T. b. rhodesiense | TRYPANOSOMA BRUCEI RHODESIENSE; MUS MUSCULUS | mus musculus | mus musculus | trypanosoma brucei rhodesiense | Zoll, S., Higgins, M.K. | 2.3 | X-RAY DIFFRACTION | 0.220 | 0.191 | false | true | IGHV7 | IGKV3 | Kappa | null | null | null | null | null |
7mf7 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 04/08/21 | Crystal structure of antibody 10E8v4-P100gA Fab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Kwon, Y.D., Kwong, P.D. | 2.0 | X-RAY DIFFRACTION | 0.231 | 0.203 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
6btj | H | L | 0 | null | null | null | null | ANTIVIRAL PROTEIN | 12/06/17 | Crystal structure of pan-H7, anti-hemagglutinin monoclonal antibody H7.5 (Fab fragment) | HOMO SAPIENS | homo sapiens | homo sapiens | null | Shanshan, L., Ian, A.W. | 1.999 | X-RAY DIFFRACTION | 0.201 | 0.200 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7b18 | G | null | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN | 11/24/20 | SARS-CoV-spike bound to two neutralising nanobodies | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; LAMA GLAMA; VICUGNA PACOS | vicugna pacos | null | severe acute respiratory syndrome coronavirus2 | Hallberg, B.M., Das, H. | 2.62 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
4k2u | H | L | 0 | A | protein | null | erythrocyte binding antigen 175 | IMMUNE SYSTEM | 04/09/13 | Crystal structure of PfEBA-175 F1 in complex with R218 antibody Fab fragment | PLASMODIUM FALCIPARUM; MUS MUSCULUS | mus musculus | mus musculus | plasmodium falciparum | Tolia, N.H. | 2.45 | X-RAY DIFFRACTION | 0.253 | 0.204 | false | false | IGHV14 | IGKV10 | Kappa | 0 | -14.754721 | SPR | null | TBD |
4hih | D | C | 0 | D | carbohydrate | RAM | ALPHA-L-RHAMNOSE | IMMUNE SYSTEM | 10/11/12 | Anti-Streptococcus pneumoniae 23F Fab 023.102 with bound rhamnose. | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Bryson, S., Risnes, L., Damgupta, S, Thomson, C.A., Schrader, J.W., Pai, E.F. | 2.0 | X-RAY DIFFRACTION | 0.236 | 0.224 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
6rlm | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 05/02/19 | Crystal structure of AT1412dm Fab fragment | HOMO SAPIENS | homo sapiens | homo sapiens | null | Neviani, V., Pearce, N.M., Pos, W., Schotte, R., Spits, H., Gros, P. | 2.5 | X-RAY DIFFRACTION | 0.267 | 0.242 | false | true | IGHV3 | IGKV4 | Kappa | null | null | null | null | null |
6nm6 | D | E | 0 | B | protein | null | envelope glycoprotein gp41 | IMMUNE SYSTEM | 01/10/19 | Crystal Structure of HIV-1 BG505 SOSIP.664 Prefusion Env Trimer Bound to N6 FR3-03 scFv in Complex with Crystallization Chaperones 3H109L Fab and 35O22 scFv at 3.2 Angstrom | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Lai, Y.-T., Kwong, P.D. | 2.739 | X-RAY DIFFRACTION | 0.288 | 0.240 | false | true | unknown | unknown | unknown | null | null | null | null | null |
7djy | B | null | 0 | null | null | null | null | BIOSYNTHETIC PROTEIN | 11/22/20 | Clec4f Nanobody 322 | LAMIUM MACULATUM | lamium maculatum | null | null | Wen, Y., Zheng, F. | 2.7 | X-RAY DIFFRACTION | 0.266 | 0.228 | false | true | IGHV1 | null | null | null | null | null | null | null |
3gk8 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 03/10/09 | X-ray crystal structure of the Fab from MAb 14, mouse antibody against Canine Parvovirus | MUS MUSCULUS | mus musculus | mus musculus | null | Hafenstein, S., Bowman, V., Sun, T., Nelson, C., Palermo, L., Chipman, P., Battisti, A., Parrish, C. | 2.0 | X-RAY DIFFRACTION | 0.306 | 0.266 | false | true | IGHV1 | IGKV6 | Kappa | null | null | null | null | null |
6qgx | B | null | 0 | A | protein | null | outer membrane protein assembly factor bama | MEMBRANE PROTEIN | 01/14/19 | Crystal structure of E.coli BamA beta-barrel in complex with nanobody F7 | ESCHERICHIA COLI O157:H7; LAMA GLAMA | lama glama | null | escherichia coli o157 | Hartmann, J.-B., Kaur, H., Jakob, R.P., Zahn, M., Zimmermann, I., Seeger, M., Maier, T., Hiller, S. | 2.2 | X-RAY DIFFRACTION | 0.266 | 0.229 | false | true | IGHV1 | null | null | null | null | null | null | null |
6jri | F | null | 0 | null | null | null | null | ANTIVIRAL PROTEIN | 04/04/19 | Crystal structure of Nanobody | VICUGNA PACOS | vicugna pacos | null | null | Mo, X., Li, J., Xu, X., Yuan, A.Y. | 3.101 | X-RAY DIFFRACTION | 0.259 | 0.235 | false | true | IGHV1 | null | null | null | null | null | null | null |
7cw2 | U | T | 0 | E | D | protein | protein | NA | NA | e2 glycoprotein | e1 glycoprotein | VIRUS/IMMUNE SYSTEM | 08/27/20 | Cryo-EM structure of Chikungunya virus in complex with Fab fragments of mAb CHK-263 (subregion around icosahedral 5-fold vertex) | CHIKUNGUNYA VIRUS; MUS MUSCULUS | mus musculus | mus musculus | chikungunya virus | chikungunya virus | Zhou, Q.F., Fox, J.M., Earnest, J.T., Ng, T.S., Kim, A.S., Fibriansah, G., Kostyuchenko, V.A., Shu, B., Diamond, M.S., Lok, S.M. | 4.5 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV5 | Kappa | null | null | null | null | null |
6p95 | H | L | 0 | c | C | protein | protein | NA | NA | unknown | pre-glycoprotein polyprotein gp complex | viral protein/immune system | 06/09/19 | Structure of Lassa virus glycoprotein in complex with Fab 25.6A | LASSA VIRUS; HOMO SAPIENS; LASSA VIRUS (STRAIN MOUSE/SIERRA LEONE/JOSIAH/1976) | homo sapiens | homo sapiens | lassa virus (strain mouse/sierraleone/josiah/1976) | lassa virus | Saphire, E.O., Hastie, K.M. | 3.5 | X-RAY DIFFRACTION | 0.247 | 0.205 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
7aqg | B | null | 0 | A | protein | null | plasminogen activator inhibitor 1 | HYDROLASE | 10/21/20 | Crystal Structure of Small Molecule Inhibitor TM5484 Bound to Stabilized Active Plasminogen Activator Inhibitor-1 (PAI-1-W175F) | HOMO SAPIENS; VICUGNA PACOS | vicugna pacos | null | homo sapiens | Sillen, M., Strelkov, S.V., Declerck, P.J. | 2.27 | X-RAY DIFFRACTION | 0.268 | 0.215 | false | true | IGHV1 | null | null | null | null | null | null | null |
7m6f | H | L | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/ANTIVIRAL PROTEIN | 03/25/21 | Structure of the SARS-CoV-2 S 6P trimer in complex with the human neutralizing antibody Fab fragment, BG1-22 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Barnes, C.O., Bjorkman, P.J. | 3.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
3kym | F | E | 0 | null | null | null | null | IMMUNE SYSTEM | 12/06/09 | Crystal structure of Li33 IgG2 di-Fab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Silvian, L.F., Pepinsky, R.B., Walus, L. | 2.62 | X-RAY DIFFRACTION | 0.339 | 0.259 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
6x9u | H | L | 0 | A | B | protein | protein | NA | NA | hiv-1 envelope glycoprotein bg505 sosip.664 gp120 | hiv-1 envelope glycoprotein bg505 sosip.664 gp41 | VIRAL PROTEIN/IMMUNE SYSTEM | 06/03/20 | HIV-1 Envelope Glycoprotein BG505 SOSIP.664, expressed in HEK293S cells and partially deglycosylated by endoglycosidase H, in complex with RM20A3 Fab | HUMAN IMMUNODEFICIENCY VIRUS 1; MACACA MULATTA | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Berndsen, Z.T., Ward, A.B. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
5v6m | H | L | 0 | P | peptide | null | envelope glycoprotein gp120 v3 peptide of con b sequence | VIRAL PROTEIN/IMMUNE SYSTEM | 03/17/17 | Crystal Structure of Rabbit Anti-HIV-1 gp120 V3 Fab 10A3 in complex with V3 peptide ConB | ORYCTOLAGUS CUNICULUS; SYNTHETIC CONSTRUCT | oryctolagus cuniculus | oryctolagus cuniculus | human immunodeficiency virus 1 | Pan, R., Kong, X.-P. | 1.9 | X-RAY DIFFRACTION | 0.224 | 0.179 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7evz | E | e | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 05/24/21 | Cryo-EM structure of cenerimod -bound Sphingosine-1-phosphate receptor 1 in complex with Gi protein | HOMO SAPIENS | homo sapiens | null | homo sapiens | homo sapiens | Yuan, Y., Jia, G.W., Shao, Z.H., Su, Z.M. | 3.07 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
5mp6 | P | Q | 0 | null | null | null | null | IMMUNE SYSTEM | 12/15/16 | Structure of the Unliganded Fab from HIV-1 Neutralizing Antibody CAP248-2B that Binds to the gp120 C-terminus - gp41 Interface, at two Angstrom resolution. | HOMO SAPIENS | homo sapiens | homo sapiens | null | Wibmer, C.K., Gorman, J., Kwong, P.D. | 1.959 | X-RAY DIFFRACTION | 0.240 | 0.198 | false | true | IGHV4 | IGLV2 | Lambda | null | null | null | null | null |
6dbe | A | null | 0 | null | null | null | null | IMMUNE SYSTEM | 05/03/18 | Crystal Structure of VHH R330 | LAMA GLAMA | lama glama | null | null | Brooks, C.L., Toride King, M., Huh, I. | 1.65 | X-RAY DIFFRACTION | 0.223 | 0.185 | false | true | IGHV1 | null | null | null | null | null | null | null |
6idl | I | J | 0 | E | protein | null | premembrane protein | VIRUS | 09/10/18 | Cryo-EM structure of Immature Dengue virus serotype 3 in complex with human antibody 1H10 Fab at pH 5.0 (Class II particle) | DENGUE VIRUS 3; HOMO SAPIENS | homo sapiens | homo sapiens | dengue virus 3 | Wirawan, M., Fibriansah, G., Ng, T.S., Zhang, Q., Kostyuchenko, V.A., Shi, J., Lok, S.M. | 25 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
2y6s | H | L | 0 | Q | peptide | null | envelope glycoprotein | IMMUNE SYSTEM/VIRAL PROTEIN | 01/25/11 | Structure of an Ebolavirus-protective antibody in complex with its mucin-domain linear epitope | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | zaire ebolavirus | Olal, D.O., Kuehne, A., Lee, J.E., Bale, S., Dye, J.M., Saphire, E.O. | 2.8 | X-RAY DIFFRACTION | 0.2873 | 0.2359 | false | false | IGHV1 | IGKV3 | Kappa | 0 | -9.532196 | Unknown | null | TBD |
5dtf | H | L | 0 | P | peptide | null | peptide | IMMUNE SYSTEM | 09/18/15 | context-independent anti-hypusine antibody FabHpu98.61 in complex with hypusine | ORYCTOLAGUS CUNICULUS; SYNTHETIC CONSTRUCT | oryctolagus cuniculus | oryctolagus cuniculus | synthetic construct | Zhai, Q., Carter, P.J. | 1.9 | X-RAY DIFFRACTION | 0.254 | 0.212 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
3okk | B | A | 0 | B | carbohydrate | KDA | polysaccharide | IMMUNE SYSTEM | 08/25/10 | Crystal structure of S25-39 in complex with Kdo(2.4)Kdo | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Blackler, R.J., Evans, S.V. | 1.95 | X-RAY DIFFRACTION | 0.234 | 0.195 | false | false | IGHV7 | IGKV8 | Kappa | null | null | null | null | null |
6fe4 | G | null | 0 | B | protein | null | shiga-like toxin 2 subunit b | TOXIN | 12/29/17 | Crystal structure of the complex between Shiga toxin Stx2 B subunit and neutralising Nb113 | ENTEROBACTERIA PHAGE 933W; VICUGNA PACOS | vicugna pacos | null | enterobacteria phage 933w | Bernedo, R., Muyldermans, S., Sterckx, Y.G.J. | 3.0 | X-RAY DIFFRACTION | 0.207 | 0.169 | false | true | IGHV3 | null | null | 0 | -10.938139 | SPR | null | TBD |
1j5o | H | L | 0 | B | protein | null | reverse transcriptase | TRANSFERASE/IMMUNE SYSTEM/DNA | 05/24/02 | CRYSTAL STRUCTURE OF MET184ILE MUTANT OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH DOUBLE STRANDED DNA TEMPLATE-PRIMER | HUMAN IMMUNODEFICIENCY VIRUS 1; MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | human immunodeficiency virus 1 | Sarafianos, S.G., Das, K., Arnold, E. | 3.5 | X-RAY DIFFRACTION | 0.338 | 0.262 | false | false | IGHV8 | IGKV10 | Kappa | null | null | null | null | null |
7ew5 | T | U | 0 | P | protein | null | major capsid protein l1 | VIRAL PROTEIN | 05/24/21 | immune complex of HPV6 L1 pentamer and neutralizing antibody 13H5 | HUMAN PAPILLOMAVIRUS TYPE 6; MUS MUSCULUS | mus musculus | mus musculus | human papillomavirus type 6 | Wang, Z.P., Wang, D.N., Gu, Y., Li, S.W. | 3.606 | X-RAY DIFFRACTION | 0.293 | 0.252 | false | false | IGHV14 | IGKV6 | Kappa | null | null | null | null | null |
4r4h | H | L | 0 | A | protein | null | hiv-1 env gp120 | VIRAL PROTEIN/IMMUNE SYSTEM/INHIBITOR | 08/19/14 | Crystal structure of non-neutralizing, A32-like antibody 2.2c in complex with HIV-1 Env gp120 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Mclellan, J., Acharya, P., Huang, C.-C., Kwong, P.D. | 4.28 | X-RAY DIFFRACTION | 0.320 | 0.309 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
4hg4 | Z | z | 0 | I | protein | null | hemagglutinin ha2 | VIRAL PROTEIN/IMMUNE SYSTEM | 10/06/12 | Crystal structure of Fab 2G1 in complex with a H2N2 influenza virus hemagglutinin | INFLUENZA A VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus | Xu, R., Wilson, I.A. | 3.2 | X-RAY DIFFRACTION | 0.302 | 0.249 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7qez | H | L | 0 | A | protein | null | spike protein s1 | VIRAL PROTEIN | 12/03/21 | Crystal structure of the SARS-CoV-2 RBD in complex with the ultrapotent antibody CV2.1169 and CR3022 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Fernandez, I., Rey, F.A. | 2.89 | X-RAY DIFFRACTION | 0.281 | 0.239 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
5tdn | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 09/19/16 | Crystal structure of the Fab fragment of anti-HER2 antibody 4D5 with redesigned heavy and light chain interfaces | HOMO SAPIENS | homo sapiens | homo sapiens | null | Yin, Y., Carter, P.J. | 1.63 | X-RAY DIFFRACTION | 0.215 | 0.185 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6e9q | G | H | 0 | null | null | null | null | IMMUNE SYSTEM | 05/01/19 | The crystal structure of bovine ultralong antibody BOV-6 | BOS TAURUS | bos taurus | bos taurus | null | Dong, J., Crowe, J.E. | 3.4 | X-RAY DIFFRACTION | 0.311 | 0.254 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
7mxp | G | J | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 05/19/21 | Cryo-EM structure of NTD-directed neutralizing antibody LP5 Fab in complex with SARS-CoV-2 S2P spike | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Reddem, E.R., Casner, R.G., Shapiro, L. | 4.46 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
1jhk | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 06/28/01 | Crystal structure of the anti-estradiol antibody 57-2 | MUS MUSCULUS | mus musculus | mus musculus | null | Lamminmaki, U., Kankare, J.A. | 2.51 | X-RAY DIFFRACTION | 0.262 | 0.198 | false | true | IGHV9 | IGKV12 | Kappa | null | null | null | null | null |
6ule | C | D | 0 | I | peptide | null | circumsporozoite protein | IMMUNE SYSTEM | 06/10/20 | Crystal structure of 2541 Fab in complex with circumsporozoite protein NANP5 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | plasmodium falciparum | Thai, E., Scally, S.W., Murugan, R., Wardemann, H., Julien, J.P. | 2.55 | X-RAY DIFFRACTION | 0.259 | 0.209 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5otj | H | L | 0 | C | protein | null | polcalcin phl p 7 | IMMUNE SYSTEM | 08/22/17 | Monomeric polcalcin (Phl p 7) in complex with two identical allergen-specific antibodies | HOMO SAPIENS; PHLEUM PRATENSE | homo sapiens | homo sapiens | phleum pratense | Mitropoulou, A.N., Davies, A.M., Beavil, A.J., McDonnell, J.M., Sutton, B.J. | 2.35 | X-RAY DIFFRACTION | 0.235 | 0.199 | false | true | IGHV1 | IGLV1 | Lambda | 0 | -13.328052 | SPR | null | TBD |
4m62 | H | L | 0 | S | protein | null | t117 | IMMUNE SYSTEM | 08/08/13 | Ontogeny of recognition specificity and functionality for the anti-HIV neutralizing antibody 4E10 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | synthetic construct | Finton, K.A.K. | 1.8 | X-RAY DIFFRACTION | 0.216 | 0.189 | false | true | IGHV1 | IGKV3 | Kappa | 0 | -11.718948 | SPR | null | TBD |
7d2z | A | null | 0 | B | protein | null | spike protein s1 | PROTEIN BINDING | 09/17/20 | Structure of sybody SR31 in complex with the SARS-CoV-2 S Receptor Binding domain (RBD) | SYNTHETIC CONSTRUCT; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | synthetic construct | null | severe acute respiratory syndrome coronavirus2 | Li, T., Cai, H., Yao, H., Qin, W., Li, D. | 1.97 | X-RAY DIFFRACTION | 0.207 | 0.182 | false | true | IGHV1 | null | null | null | null | null | null | null |
7m1h | G | null | 0 | A | protein | null | botulinum neurotoxin a light chain | ANTITOXIN | 03/13/21 | Crystal structure of LC/A-JPU-C10-JPU-D12-JPU-B8-JPU-G3-ciA-F12-ciA-D12 | CLOSTRIDIUM BOTULINUM; VICUGNA PACOS | vicugna pacos | null | clostridium botulinum | Lam, K., Jin, R. | 2.78 | X-RAY DIFFRACTION | 0.249 | 0.217 | false | true | IGHV1 | null | null | null | null | null | null | null |
3gje | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 03/08/09 | Rational development of high-affinity T-cell receptor-like antibodies | HOMO SAPIENS | homo sapiens | homo sapiens | null | Stewart-Jones, G., Wadle, A., Hombach, A., Shenderov, E., Held, G., Fischer, E., Kleber, S., Stenner-Liewen, F., Bauer, S., McMichael, A., Knuth, A., Abken, H., Hombach, A.A., Cerundolo, V., Jones, E.Y., Renner, C. | 2.3 | X-RAY DIFFRACTION | 0.302 | 0.222 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
1cfq | B | A | 0 | null | null | null | null | POLYSPECIFICITY | 03/19/99 | ANTI-P24 (HIV-1) FAB FRAGMENT CB41 | MUS MUSCULUS | mus musculus | mus musculus | null | Keitel, T., Kramer, A., Wessner, H., Scholz, C., Schneider-Mergener, J., Hoehne, W. | 2.8 | X-RAY DIFFRACTION | 0.312 | 0.221 | false | false | IGHV1 | IGKV14 | Kappa | null | null | null | null | null |
7cwt | E | D | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 08/31/20 | SARS-CoV-2 Spike protein in complex with hb27 and fc05 Fab cocktail | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Cui, Z., Wang, X. | 3.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV5 | IGKV3 | Kappa | null | null | null | null | null |
5wb2 | D | null | 0 | null | null | null | null | MEMBRANE PROTEIN | 06/27/17 | US28 bound to engineered chemokine CX3CL1.35 and nanobodies | HUMAN CYTOMEGALOVIRUS; LAMA GLAMA; HOMO SAPIENS; SYNTHETIC CONSTRUCT | synthetic construct | null | null | Jude, K.M., Burg, J.S., Tsutsumi, N., Miles, T.F., Garcia, K.C. | 3.5 | X-RAY DIFFRACTION | 0.296 | 0.252 | false | true | IGHV1 | null | null | null | null | null | null | null |
35c8 | H | L | 0 | L | Hapten | NOX | N-(PARA-GLUTARAMIDOPHENYL-ETHYL)-PIPERIDINIUM-N-OXIDE | CATALYTIC ANTIBODY | 03/18/98 | CATALYTIC ANTIBODY 5C8, FAB-INHIBITOR COMPLEX | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Gruber, K., Wilson, I.A. | 2.0 | X-RAY DIFFRACTION | 0.261 | 0.206 | false | false | IGHV14 | IGKV4 | Kappa | null | null | null | null | null |
7fej | H | L | 0 | 2 | 1 | protein | protein | NA | NA | a/af/72 vp2 | a/af/72 vp1 | VIRUS | 07/20/21 | Complex of FMDV A/AF/72 and bovine neutralizing scFv antibody R55 | BOS TAURUS; FOOT-AND-MOUTH DISEASE VIRUS | bos taurus | bos taurus | foot-and-mouth disease virus | foot-and-mouth disease virus | Yong, H., Kun, L., Zhiyong, L. | 3.91 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
4krl | B | null | 0 | A | protein | null | epidermal growth factor receptor | TRANSFERASE/IMMUNE SYSTEM | 05/16/13 | Nanobody/VHH domain 7D12 in complex with domain III of the extracellular region of EGFR, pH 6.0 | LAMA GLAMA; HOMO SAPIENS | lama glama | null | homo sapiens | Ferguson, K.M., Schmitz, K.R. | 2.849 | X-RAY DIFFRACTION | 0.268 | 0.213 | false | true | IGHV1 | null | null | 0 | -9.997047 | SPR | null | TBD |
2p42 | B | null | 0 | A | protein | null | ribonuclease pancreatic | HYDROLASE/IMMUNE SYSTEM | 03/11/07 | Complex of a camelid single-domain vhh antibody fragment with RNASE A at 1.8A resolution: SE3-mono-2 crystal form with three se-met sites (M34, M51, M83) in vhh scaffold | CAMELUS DROMEDARIUS; BOS TAURUS | camelus dromedarius | null | bos taurus | Tereshko, V., Uysal, S., Koide, A., Margalef, K., Koide, S., Kossiakoff, A.A. | 1.8 | X-RAY DIFFRACTION | 0.215 | 0.171 | false | true | IGHV1 | null | null | 0 | -10.59 | Other | 30 | 18445622 |
4f15 | B | C | 0 | A | protein | null | hemagglutinin | IMMUNE SYSTEM | 05/06/12 | Molecular basis of infectivity of 2009 pandemic H1N1 influenza A viruses | INFLUENZA A VIRUS; MUS MUSCULUS | mus musculus | mus musculus | influenza a virus | Kim, K.H., Cho, K.J., Lee, J.H., Park, Y.H., Khan, T.G., Lee, J.Y., Kang, S.H., Alam, I. | 2.81 | X-RAY DIFFRACTION | 0.289 | 0.233 | false | false | IGHV3 | IGKV7 | Kappa | null | null | null | null | null |
5m6a | null | C | 0 | null | null | null | null | IMMUNE SYSTEM | 10/24/16 | Crystal structure of cardiotoxic Bence-Jones light chain dimer H9 | HOMO SAPIENS | null | homo sapiens | null | Oberti, L., Rognoni, P., Bacarizo, J., Bolognesi, M., Ricagno, S. | 1.64 | X-RAY DIFFRACTION | 0.203 | 0.183 | false | false | null | IGLV2 | Lambda | null | null | null | null | null |
5mv4 | C | D | 0 | E | peptide | null | synthetic peptide containing the citrullinated collagentype ii epitope cii616-639,collagen alpha-1(ii) chain,synthetic peptide containing the citrullinated collagen type ii epitope cii616- 639 | IMMUNE SYSTEM | 01/15/17 | ACC1 Fab fragment in complex with citrullinated CII616-639 epitope of collagen type II (ptm23) | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | mus musculus | Dobritzsch, D., Holmdahl, R., Ge, C. | 2.9 | X-RAY DIFFRACTION | 0.247 | 0.232 | false | false | IGHV6 | IGKV3 | Kappa | null | null | null | null | null |
6xc2 | H | L | 0 | A | protein | null | spike protein s1 | IMMUNE SYSTEM/VIRAL PROTEIN | 06/08/20 | Crystal structure of SARS-CoV-2 receptor binding domain in complex with neutralizing antibody CC12.1 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Yuan, M., Liu, H., Wu, N.C., Zhu, X., Wilson, I.A. | 3.112 | X-RAY DIFFRACTION | 0.267 | 0.213 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
3moa | H | L | 0 | P | peptide | null | gp41 mper-derived peptide | IMMUNE SYSTEM | 04/22/10 | Crystal structure of the neutralizing HIV antibody 2F5 Fab fragment (recombinantly produced Fab) with 17 aa gp41 MPER-derived peptide | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | null | Nicely, N.I., Dennison, S.M., Kelsoe, G., Liao, H.-X., Alam, S.M., Haynes, B.F. | 2.3 | X-RAY DIFFRACTION | 0.219 | 0.184 | false | true | IGHV2 | IGKV1 | Kappa | null | null | null | null | null |
7czt | H | L | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 09/09/20 | S protein of SARS-CoV-2 in complex bound with P5A-2G9 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Yan, R.H., Zhang, Y.Y., Li, Y.N., Zhou, Q. | 2.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV5 | Lambda | null | null | null | null | null |
6dfg | H | L | 0 | A | protein | null | envelope glycoprotein gp160 | VIRAL PROTEIN/IMMUNE SYSTEM | 05/14/18 | BG505 MD39 SOSIP trimer in complex with mature BG18 fragment antigen binding | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Ozorowski, G., Steichen, J.M., Schief, W.R., Ward, A.B. | 4.42 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGLV3 | Lambda | null | null | null | null | null |
3ob0 | H | L | 0 | H | Hapten | 2M6 | 7-DEOXY-L-GLYCERO-ALPHA-D-MANNO-HEPTOPYRANOSYL-(1->2)-ALPHA-D-MANNOPYRANOSYL-(1->2)-ALPHA-D-MANNOPYRANOSYL-(1->3)-ALPHA-D-MANNOPYRANOSE | IMMUNE SYSTEM | 08/06/10 | A non-self sugar mimic of the HIV glycan shield shows enhanced antigenicity | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Doores, K.J., Fulton, Z., Hong, V., Patel, M.K., Scanlan, C.N., Wormald, M.R., Finn, M.G., Burton, D.R., Wilson, I.A., Davis, B.G | 2.85 | X-RAY DIFFRACTION | 0.280 | 0.232 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7pr0 | H | L | 0 | E | protein | null | spike protein s1 | VIRAL PROTEIN | 09/20/21 | Crystal structure of the receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with FD-5D Fab | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, D., Ren, J., Stuart, D.I. | 2.92 | X-RAY DIFFRACTION | 0.251 | 0.214 | false | true | IGHV3 | IGKV2 | Kappa | null | null | null | null | null |
2eh7 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 03/05/07 | Crystal structure of humanized KR127 FAB | MUS MUSCULUS | mus musculus | mus musculus | null | Chi, S.-W., Kim, S.-J., Maeng, C.-Y., Hong, H.J., Ryu, S.-E. | 2.5 | X-RAY DIFFRACTION | 0.252 | 0.207 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6oe5 | H | L | 0 | A | protein | null | fusion glycoprotein f0,fibritin | Viral protein/immune system | 03/27/19 | Splayed open prefusion RSV F captured by CR9501 and motavizumab Fabs | HUMAN RESPIRATORY SYNCYTIAL VIRUS A (STRAIN A2); ENTEROBACTERIA PHAGE T4; MUS MUSCULUS; HOMO SAPIENS | homo sapiens | homo sapiens | human respiratory syncytial virus a (straina2), enterobacteria phage t4 | Gilman, M.S.A., McLellan, J.S. | 4.1 | X-RAY DIFFRACTION | 0.306 | 0.262 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
7q9i | J | K | 0 | C | protein | null | surface glycoprotein | Viral Protein/Immune System | 11/12/21 | Beta-43 fab in complex with SARS-CoV-2 beta-Spike glycoprotein | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Duyvesteyn, H.M.E., Ren, J., Stuart, D.I. | 4.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
7rxp | H | L | 0 | A | protein | null | circumsporozoite protein | IMMUNE SYSTEM | 08/23/21 | Fab1512 in complex with the C-terminal alpha-TSR domain of P. falciparum | HOMO SAPIENS; PLASMODIUM FALCIPARUM (ISOLATE 3D7) | homo sapiens | homo sapiens | plasmodium falciparum (isolate 3d7) | Pholcharee, T., Oyen, D., Wilson, I.A. | 1.761 | X-RAY DIFFRACTION | 0.205 | 0.177 | false | true | IGHV3 | IGKV2 | Kappa | null | null | null | null | null |
6vrh | B | C | 0 | A | protein | null | sodium-dependent serotonin transporter | TRANSPORT PROTEIN | 02/07/20 | Cryo-EM structure of the wild-type human serotonin transporter complexed with paroxetine and 8B6 Fab | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Coleman, J.A., Navratna, V., Yang, D. | 3.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV6 | Kappa | null | null | null | null | null |
5uk4 | j | null | 0 | J | protein | null | anti-vesicular stomatitis virus n vhh | Viral Protein/RNA/Immune System | 01/19/17 | VESICULAR STOMATITS VIRUS N PROTEIN IN COMPLEX WITH INHIBITORY NANOBODY 1307 | VESICULAR STOMATITIS INDIANA VIRUS (STRAIN SAN JUAN); VICUGNA PACOS | vicugna pacos | null | vesicular stomatitis indiana virus (strain sanjuan) | Hanke, L., Knockenhauer, K.E., Ploegh, H.L., Schwartz, T.U. | 3.204 | X-RAY DIFFRACTION | 0.288 | 0.237 | false | false | IGHV1 | null | null | null | null | null | null | null |
1ieh | A | null | 7 | null | null | null | null | IMMUNE SYSTEM | 04/09/01 | SOLUTION STRUCTURE OF A SOLUBLE SINGLE-DOMAIN ANTIBODY WITH HYDROPHOBIC RESIDUES TYPICAL OF A VL/VH INTERFACE | LAMA GLAMA | lama glama | null | null | Vranken, W., Tolkatchev, D., Xu, P., Tanha, J., Chen, Z., Narang, S., Ni, F. | NOT | SOLUTION NMR | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
1bj1 | K | J | 0 | V | protein | null | vascular endothelial growth factor | COMPLEX (ANTIBODY/ANTIGEN) | 06/30/98 | VASCULAR ENDOTHELIAL GROWTH FACTOR IN COMPLEX WITH A NEUTRALIZING ANTIBODY | MUS MUSCULUS; HOMO SAPIENS | mus musculus | mus musculus | homo sapiens | Muller, Y.A., Christinger, H.W., De Vos, A.M. | 2.4 | X-RAY DIFFRACTION | 0.266 | 0.196 | false | true | IGHV7 | IGKV1 | Kappa | 0 | -11.55 | SPR | 25 | 9753694 |
6wty | E | F | 0 | D | protein | null | reticulocyte binding protein 2b | CELL INVASION | 05/04/20 | Plasmodium vivax reticulocyte binding protein 2b (PvRBP2b) bound to human monoclonal antibody 253245 | PLASMODIUM VIVAX (STRAIN SALVADOR I); HOMO SAPIENS | homo sapiens | homo sapiens | plasmodium vivax (strain salvador i) | Chan, L.J., Dietrich, M.H., Tham, W.H. | 3.481 | X-RAY DIFFRACTION | 0.301 | 0.262 | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null |
7q9g | E | F | 0 | B | protein | null | surface glycoprotein | Viral Protein/Immune System | 11/12/21 | COVOX-222 fab in complex with SARS-CoV-2 beta-Spike glycoprotein | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Duyvesteyn, H.M.E., Ren, J., Stuart, D.I. | 3.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
5w1m | H | G | 0 | S | protein | null | pre-glycoprotein polyprotein gp complex | VIRAL PROTEIN/IMMUNE SYSTEM | 06/03/17 | MACV GP1 CR1-07 Fab complex | HOMO SAPIENS; MACHUPO VIRUS | homo sapiens | homo sapiens | machupo virus | Raymond, D.D., Clark, L.E., Abraham, J. | 3.91 | X-RAY DIFFRACTION | 0.264 | 0.248 | false | true | IGHV3 | IGKV4 | Kappa | 0 | -10.624477 | SPR | null | TBD |
5c6t | H | L | 0 | A | protein | null | envelope glycoprotein b | Viral Protein/Immue System | 06/23/15 | Crystal structure of HCMV glycoprotein B in complex with 1G2 Fab | HOMO SAPIENS; HUMAN CYTOMEGALOVIRUS | homo sapiens | homo sapiens | human cytomegalovirus | Chandramouli, S., Ciferri, C., Settembre, E.C., Carfi, A. | 3.6 | X-RAY DIFFRACTION | 0.260 | 0.212 | false | true | IGHV4 | IGLV1 | Lambda | 0 | -13.486994 | SPR | null | TBD |
6cdo | A | B | 0 | C | peptide | null | hiv-1 fusion peptide 512-519 | IMMUNE SYSTEM | 02/08/18 | Structure of vaccine-elicited HIV-1 neutralizing antibody vFP16.02 in complex with HIV-1 fusion peptide residue 512-519 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | human immunodeficiency virus 1 | Xu, K., Liu, K., Kwong, P.D. | 2.099 | X-RAY DIFFRACTION | 0.226 | 0.194 | false | true | IGHV1 | IGKV1 | Kappa | 0 | -12.243673 | Unknown | null | TBD |
4aq1 | B | null | 0 | null | null | null | null | STRUCTURAL PROTEIN | 04/12/12 | Structure of the SbsB S-layer protein of Geobacillus stearothermophilus PV72p2 in complex with nanobody KB6 | GEOBACILLUS STEAROTHERMOPHILUS; LAMA GLAMA | lama glama | null | null | Baranova, E., Remaut, H. | 2.42 | X-RAY DIFFRACTION | 0.23567 | 0.18301 | false | true | IGHV1 | null | null | null | null | null | null | null |
7ps7 | H | L | 0 | R | protein | null | surface glycoprotein | VIRAL PROTEIN | 09/22/21 | Crystal structure of the receptor binding domain of SARS-CoV-2 beta variant spike glycoprotein in complex with Beta-40 Fab | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, D., Ren, J., Stuart, D.I. | 3.9 | X-RAY DIFFRACTION | 0.284 | 0.233 | false | true | IGHV4 | IGLV3 | Lambda | null | null | null | null | null |
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