pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 354
values | r_factor stringclasses 342
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
7e3b | B | C | 0 | A | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 02/08/21 | SARS-Cov-2 spike in complex with the Ab5 neutralizing antibody (focused refinement on Fab-RBD) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Liu, C. | 4.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
4hf5 | H | L | 0 | A | protein | null | hemagglutinin ha1 | VIRAL PROTEIN/IMMUNE SYSTEM | 10/04/12 | Crystal structure of Fab 8F8 in complex a H2N2 influenza virus hemagglutinin | INFLUENZA A VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus | Xu, R., Wilson, I.A. | 3.004 | X-RAY DIFFRACTION | 0.282 | 0.229 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
7b09 | H | L | 0 | A | protein | null | envelope polyprotein | VIRUS LIKE PARTICLE | 11/19/20 | Puumala virus glycoprotein (Gc) in complex with fab fragment P-4G2. | MYODES GLAREOLUS; PUUMALA ORTHOHANTAVIRUS | myodes glareolus | myodes glareolus | puumala orthohantavirus | Rissanen, I., Stass, R., Huiskonen, J.T., Bowden, T.A. | 13.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV5 | unknown | unknown | null | null | null | null | null |
7k9i | H | L | 0 | A | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 09/29/20 | SARS-CoV-2 Spike RBD in complex with neutralizing Fab 2B04 (local refinement) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS | mus musculus | mus musculus | severe acute respiratory syndrome coronavirus2 | Errico, J.M., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID) | 3.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV2 | IGLV1 | Lambda | null | null | null | null | null |
5lmj | C | null | 0 | null | null | null | null | IMMUNE SYSTEM | 08/01/16 | Llama nanobody PorM_19 | LAMA GLAMA | lama glama | null | null | Leone, P., Cambillau, C., Roussel, A. | 2.1 | X-RAY DIFFRACTION | 0.210 | 0.188 | false | true | IGHV1 | null | null | null | null | null | null | null |
7m8j | H | L | 0 | A | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 03/29/21 | SARS-CoV-2 S-NTD + Fab CM25 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Johnson, N.V., Mclellan, J.S. | 3.48 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
2uyl | N | M | 0 | null | null | null | null | IMMUNE SYSTEM | 04/10/07 | Crystal structure of a monoclonal antibody directed against an antigenic determinant common to Ogawa and Inaba serotypes of Vibrio cholerae O1 | MUS MUSCULUS | mus musculus | mus musculus | null | Ahmed, F., Haouz, A., Nato, F., Fournier, J.M., Alzari, P.M. | 2.5 | X-RAY DIFFRACTION | 0.257 | 0.211 | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7lf2 | O | M | 0 | R | protein | null | arginase-1 | HYDROLASE/IMMUNE SYSTEM | 01/15/21 | Trimeric human Arginase 1 in complex with mAb4 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Gomez-Llorente, Y., Scapin, G., Palte, R.L. | 3.72 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
5d71 | H | L | 0 | A | protein | null | granulocyte-macrophage colony-stimulating factor | IMMUNE SYSTEM | 08/13/15 | Crystal structure of MOR04302, a neutralizing anti-human GM-CSF antibody Fab fragment in complex with human GM-CSF | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Eylenstein, R., Weinfurtner, D., Steidl, S., Boettcher, J., Augustin, M. | 2.25 | X-RAY DIFFRACTION | 0.219 | 0.180 | false | true | IGHV3 | IGLV3 | Lambda | 0 | -13.897673 | Unknown | null | TBD |
6veq | C | D | 0 | E | protein | null | insulin receptor subunit alpha | TOXIN | 06/03/20 | Con-Ins G1 in complex with the human insulin microreceptor in turn in complex with Fv 83-7 | HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | Menting, J.G., Chou, D.H.-C., Lawrence, M.C., Xiong, X. | 3.25 | X-RAY DIFFRACTION | 0.277 | 0.228 | false | true | IGHV2 | IGKV8 | Kappa | null | null | null | null | null |
7m7g | E | F | 0 | A | protein | null | eryai,6-deoxyerythronolide-b synthase erya3, modules 5 and6 chimera | BIOSYNTHETIC PROTEIN/IMMUNE SYSTEM | 03/28/21 | 6-Deoxyerythronolide B synthase (DEBS) module 1 in complex with antibody fragment 1B2: State 2 | SACCHAROPOLYSPORA ERYTHRAEA; HOMO SAPIENS | homo sapiens | homo sapiens | saccharopolyspora erythraea | Cogan, D.P., Zhang, K., Chiu, W., Khosla, C. | 4.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV2 | Kappa | null | null | null | null | null |
7so9 | O | N | 0 | K | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 10/29/21 | SARS-CoV-2 S B.1.617.2 delta variant + S2M11 + S2L20 Global Refinement | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID) | 2.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7k75 | I | J | 0 | F | peptide | null | pfcsp n-terminal peptide p17 | IMMUNE SYSTEM | 09/22/20 | Crystal structure of MAD2-6 IgA Fab in complex with PfCSP N-terminal peptide. | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | plasmodium falciparum | Pholcharee, T., Wilson, I.A. | 2.5 | X-RAY DIFFRACTION | 0.236 | 0.192 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
2xkn | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 07/09/10 | Crystal structure of the Fab fragment of the anti-EGFR antibody 7A7 | MUS MUSCULUS | mus musculus | mus musculus | null | Talavera, A., Mackenzie, J., Friemann, R., Garrido, G., Lopez-Requena, A., Moreno, E., Krengel, U. | 1.4 | X-RAY DIFFRACTION | 0.1765 | 0.1438 | false | false | IGHV5 | IGKV10 | Kappa | null | null | null | null | null |
4ocn | F | null | 0 | E | D | protein | protein | NA | NA | 26s proteasome regulatory subunit rpn11 | 26s proteasome regulatory subunit rpn8 | HYDROLASE, PROTEIN BINDING | 01/09/14 | Crystal Structure of the Rpn8-Rpn11 MPN domain heterodimer, crystal form II | SACCHAROMYCES CEREVISIAE; LAMA GLAMA | lama glama | null | saccharomyces cerevisiae | saccharomyces cerevisiae | Pathare, G.R., Bracher, A. | 2.25 | X-RAY DIFFRACTION | 0.281 | 0.232 | false | true | IGHV1 | null | null | null | null | null | null | null |
4fqq | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 06/25/12 | Crystal Structure of Germline Antibody PGT121-GL Fab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Scharf, L., Bjorkman, P.J. | 2.42 | X-RAY DIFFRACTION | 0.237 | 0.194 | false | true | IGHV4 | IGLV3 | Lambda | null | null | null | null | null |
4fqj | H | L | 0 | A | protein | null | hemagglutinin | VIRAL PROTEIN/IMMUNE SYSTEM | 06/25/12 | Influenza B/Florida/4/2006 hemagglutinin Fab CR8071 complex | INFLUENZA B VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | influenza b virus | Dreyfus, C., Laursen, N.S., Wilson, I.A. | 2.5 | X-RAY DIFFRACTION | 0.265 | 0.230 | false | true | IGHV1 | IGLV1 | Lambda | 0 | -12.340621 | BLI | null | TBD |
7kn5 | D | null | 0 | B | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 11/04/20 | Crystal structure of SARS-CoV-2 receptor binding domain complexed with nanobodies VHH E and U | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; VICUGNA PACOS | vicugna pacos | null | severe acute respiratory syndrome coronavirus2 | Liu, H., Yuan, M., Zhu, X., Wu, N.C., Wilson, I.A. | 1.87 | X-RAY DIFFRACTION | 0.213 | 0.177 | false | true | IGHV1 | null | null | null | null | null | null | null |
4zpt | A | B | 0 | R | protein | null | spike glycoprotein | Viral protein/Immune system | 05/08/15 | Structure of MERS-Coronavirus Spike Receptor-binding Domain (England1 Strain) in Complex with Vaccine-Elicited Murine Neutralizing Antibody D12 (Crystal Form 1) | HUMAN CORONAVIRUS EMC (ISOLATE UNITED KINGDOM/H123990006/2012); MUS MUSCULUS | mus musculus | mus musculus | human coronavirus emc (isolate unitedkingdom/h123990006/2012) | Joyce, M.G., Mascola, J.R., Graham, B.S., Kwong, P.D. | 2.591 | X-RAY DIFFRACTION | 0.244 | 0.204 | false | false | IGHV5 | IGKV10 | Kappa | 0 | -10.918115 | BLI | null | TBD |
6ev1 | E | F | 0 | null | null | null | null | IMMUNE SYSTEM | 11/01/17 | Crystal structure of antibody against schizophyllan | MUS MUSCULUS | mus musculus | mus musculus | null | Sung, K.H., Josewski, J., Dubel, S., Blankenfeldt, W., Rau, U. | 3.043 | X-RAY DIFFRACTION | 0.238 | 0.186 | false | true | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
6b5l | H | L | 0 | A | peptide | null | pfcsp peptide 20 | IMMUNE SYSTEM | 09/29/17 | Structure of PfCSP peptide 20 with human protective antibody CIS43 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | plasmodium falciparum | Pancera, M., Weidle, C. | 2.4 | X-RAY DIFFRACTION | 0.238 | 0.199 | false | true | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
6wyr | I | M | 0 | null | null | null | null | IMMUNE SYSTEM | 05/13/20 | Crystal structure of anti-Muscle Specific Kinase (MuSK) Fab, MuSK1A | HOMO SAPIENS | homo sapiens | homo sapiens | null | Vieni, C., Ekiert, D. | 1.8 | X-RAY DIFFRACTION | 0.214 | 0.180 | false | true | IGHV1 | IGLV3 | Lambda | null | null | null | null | null |
2kqm | null | A | 14 | null | null | null | null | IMMUNE SYSTEM | 11/11/09 | Solution structure of the KI O18/O8 Y87H immunoglobulin light chain variable domain | HOMO SAPIENS | null | homo sapiens | null | Volkman, B.F., Peterson, F.C., Ramirez-Alvarado, M., Baden, E.M. | NOT | SOLUTION NMR | null | null | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
1qgc | A | 4 | 0 | 5 | 1 | 3 | peptide | protein | protein | NA | NA | NA | protein (gh-loop from virus capsid protein vp1) | protein (virus capsid protein vp1) | protein (virus capsid protein vp3) | Virus/Immune system | 04/23/99 | STRUCTURE OF THE COMPLEX OF A FAB FRAGMENT OF A NEUTRALIZING ANTIBODY WITH FOOT AND MOUTH DISEASE VIRUS | FOOT-AND-MOUTH DISEASE VIRUS - TYPE C; MUS MUSCULUS | mus musculus | mus musculus | foot-and-mouth disease virus - type c | foot-and-mouth disease virus - type c | foot-and-mouth disease virus - type c | Fita, I. | 30.0 | ELECTRON MICROSCOPY | null | null | false | false | IGHV5 | IGKV3 | Kappa | null | null | null | null | null |
5i1d | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 02/05/16 | CRYSTAL STRUCTURE OF HUMAN GERMLINE ANTIBODY IGHV3-23/IGKV4-1 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Teplyakov, A., Obmolova, G., Malia, T., Luo, J., Gilliland, G. | 2.0 | X-RAY DIFFRACTION | 0.251 | 0.216 | false | true | IGHV3 | IGKV4 | Kappa | null | null | null | null | null |
6tnp | H | L | 0 | H | unknown | NO8 | unknown | IMMUNE SYSTEM | 12/09/19 | Crystal structure of the ScFv-5E5 in complex with a Tn glycopeptide | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Macias-Leon, J., Corzana, F., Hurtado-Guerrero, R. | 3.0 | X-RAY DIFFRACTION | 0.251 | 0.203 | false | true | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
6ulc | H | L | 0 | A | E | protein | protein | NA | NA | envelope glycoprotein gp120,envelope glycoprotein gp120 | envelope glycoprotein gp120,envelope glycoprotein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 10/07/19 | Structure of full-length, fully glycosylated, non-modified HIV-1 gp160 bound to PG16 Fab at a nominal resolution of 4.6 Angstrom | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Pan, J., Chen, B., Harrison, S.C. | 4.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
5viy | M | N | 0 | A | protein | null | envelope glycoprotein gp160 | VIRAL PROTEIN/IMMUNE SYSTEM | 04/17/17 | BG505 SOSIP.664 in complex with broadly neutralizing antibodies BG1 and 8ANC195 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Wang, H., Bjorkman, P.J. | 6.2 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null |
5u3l | A | B | 0 | C | peptide | null | gp41 mper peptide | IMMUNE SYSTEM/VIRAL PROTEIN | 12/02/16 | Crystal Structure of DH511.2 Fab in Complex with HIV-1 gp41 MPER 670-683 Peptide | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Ofek, G., Wu, L., Lougheed, C.S., Williams, L.D., Nicely, N.I., Haynes, B.F. | 2.165 | X-RAY DIFFRACTION | 0.231 | 0.205 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
1a7p | H | L | 0 | null | null | null | null | IMMUNOGLOBULIN | 03/16/98 | FV FRAGMENT OF MOUSE MONOCLONAL ANTIBODY D1.3 (BALB/C, IGG1, K) ENGINEERED MUTANT PRO95L->SER ON VARIANT CHAIN L GLU81->ASP AND CHAIN H LEU312->VAL | MUS MUSCULUS | mus musculus | mus musculus | null | Marks, C., Henrick, K., Winter, G. | 2.01 | X-RAY DIFFRACTION | unknown | 0.174 | false | true | IGHV2 | IGKV12 | Kappa | null | null | null | null | null |
4ma8 | H | L | 0 | C | protein | null | major prion protein | IMMUNE SYSTEM | 08/15/13 | Crystal structure of mouse prion protein complexed with Chlorpromazine | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Baral, P.K., Swayampakula, M., James, M.N.G. | 2.2 | X-RAY DIFFRACTION | 0.236 | 0.195 | false | true | IGHV1 | IGKV5 | Kappa | null | null | null | null | null |
7kpj | C | D | 0 | F | protein | null | gram_pos_anchoring domain-containing protein | IMMUNE SYSTEM | 11/11/20 | Crystal structure of Ruminococcus gnavus immunoglobulin binding protein in complex with 338E6 Fab | MUS MUSCULUS; RUMINOCOCCUS GNAVUS | mus musculus | mus musculus | ruminococcus gnavus | Borowska, M.T., Adams, E.J. | 2.1 | X-RAY DIFFRACTION | 0.266 | 0.229 | false | true | IGHV5 | IGKV6 | Kappa | null | null | null | null | null |
6u14 | A | null | 0 | null | null | null | null | IMMUNE SYSTEM | 08/15/19 | VHH R303 C33A/C102A in complex withthe LRR domain of InlB | CAMELUS DROMEDARIUS | camelus dromedarius | null | null | Mendoza, M.N., Jian, M., Toride King, M., Brooks, C.L. | 1.3 | X-RAY DIFFRACTION | 0.179 | 0.159 | false | true | IGHV1 | null | null | null | null | null | null | null |
7mf9 | Q | R | 0 | null | null | null | null | IMMUNE SYSTEM | 04/08/21 | Crystal structure of antibody 10E8v4-P100fA Fab in space group C2 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Kwon, Y.D., Kwong, P.D. | 3.7 | X-RAY DIFFRACTION | 0.269 | 0.240 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
6woz | B | C | 0 | A | protein | null | reticulocyte binding protein 2b | CELL INVASION | 04/26/20 | Plasmodium vivax reticulocyte binding protein 2b (PvRBP2b) bound to human monoclonal antibody 251249 | PLASMODIUM VIVAX (STRAIN SALVADOR I); HOMO SAPIENS | homo sapiens | homo sapiens | plasmodium vivax (strain salvador i) | Chan, L.J., Dietrich, M.H., Tham, W.H. | 2.9 | X-RAY DIFFRACTION | 0.258 | 0.211 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
6e56 | G | I | 0 | D | protein | null | hemagglutinin | VIRAL PROTEIN/IMMUNE SYSTEM | 07/19/18 | Human antibody H2214 in complex with influenza hemagglutinin A/Aichi/2/1968 (X-31) (H3N2) | INFLUENZA A VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus | McCarthy, K.R., Harrison, S.C. | 2.0 | X-RAY DIFFRACTION | 0.214 | 0.188 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
7mnm | H | L | 0 | A | protein | null | e3 sumo-protein ligase ranbp2 | TRANSPORT PROTEIN/Immune System | 05/01/21 | Crystal structure of the N-terminal domain of NUP358/RanBP2 (residues 1-752) T585M mutant in complex with Fab fragment | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Bley, C.J., Nie, S., Mobbs, G.W., Petrovic, S., Gres, A.T., Liu, X., Mukherjee, S., Harvey, S., Huber, F.M., Lin, D.H., Brown, B., Tang, A.W., Rundlet, E.J., Correia, A.R., Chen, S., Regmi, S.G., Stevens, T.A., Jette, C.A., Dasso, M., Patke, A., Palazzo, A.F., Kossiakoff, A.A., Hoelz, A. | 4.7 | X-RAY DIFFRACTION | 0.254 | 0.204 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6uqr | A | a | 0 | B | protein | null | ige | IMMUNE SYSTEM | 10/21/19 | Complex of IgE and Ligelizumab | HOMO SAPIENS | homo sapiens | null | homo sapiens | Tarchevskaya, S.S., Kleinboelting, S., Jardetzky, T.S. | 3.65029 | X-RAY DIFFRACTION | 0.295 | 0.290 | true | true | unknown | unknown | unknown | null | null | null | null | null |
7kqe | I | N | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 11/15/20 | SARS-CoV-2 spike glycoprotein:Fab 3D11 complex | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Asarnow, D., Charles, C., Cheng, Y. | 2.88 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGLV6 | Lambda | null | null | null | null | null |
4oaw | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 01/06/14 | Fab structure of anti-HIV gp120 V2 mAb 2158 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Spurrier, B.R., Kong, X.P. | 2.8 | X-RAY DIFFRACTION | 0.254 | 0.182 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
4xtr | E | F | 0 | A | protein | null | atpase get3 | HYDROLASE/TRANSPORT PROTEIN | 01/23/15 | Structure of Get3 bound to the transmembrane domain of Pep12 | HOMO SAPIENS, SYNTHETIC CONSTRUCT; SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C); SACCHAROMYCES CEREVISIAE | homo sapiens, synthetic construct | homo sapiens, synthetic construct | saccharomyces cerevisiae (strain atcc 204508 /s288c) | Mateja, A., Paduch, M., Chang, H.-Y., Szydlowska, A., Kossiakoff, A.A., Hegde, R.S., Keenan, R.J. | 2.05 | X-RAY DIFFRACTION | 0.216 | 0.187 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6cwd | A | a | 0 | C | protein | null | capsid protein | VIRAL PROTEIN/IMMUNE SYSTEM | 03/30/18 | Hepatitis B core-antigen in complex with scFv e13 | ORYCTOLAGUS CUNICULUS; HEPATITIS B VIRUS GENOTYPE D SUBTYPE ADW | oryctolagus cuniculus | null | hepatitis b virus genotype d subtype adw | Eren, E., Steven, A.C., Wingfield, P.T. | 3.33 | X-RAY DIFFRACTION | 0.282 | 0.242 | true | true | unknown | unknown | unknown | null | null | null | null | null |
4kkl | C | D | 0 | A | protein | null | h(+)/cl(-) exchange transporter clca | tranport protein, membrane protein | 05/06/13 | Structure of the E148A mutant of CLC-ec1 delta NC construct in 100mM fluoride | MUS MUSCULUS; ESCHERICHIA COLI | mus musculus | mus musculus | escherichia coli | Stockbridge, R.B., Lim, H.-H., Miller, C. | 2.85 | X-RAY DIFFRACTION | 0.290 | 0.248 | false | true | IGHV4 | IGKV4 | Kappa | null | null | null | null | null |
4u1g | B | C | 0 | A | protein | null | reticulocyte binding protein 5 | IMMUNE SYSTEM | 07/15/14 | Plasmodium falciparum reticulocyte-binding protein homologue 5 (PfRH5) bound to monoclonal antibody QA1 | PLASMODIUM FALCIPARUM; ORYCTOLAGUS CUNICULUS | oryctolagus cuniculus | oryctolagus cuniculus | plasmodium falciparum | Wright, K.E., Hjerrild, K.A., Bartlett, J., Douglas, A.D., Jin, J., Brown, R.E., Ashfield, R., Clemmensen, S.B., de Jongh, W.A., Draper, S.J., Higgins, M.K. | 3.1 | X-RAY DIFFRACTION | 0.281 | 0.236 | false | true | IGHV5 | IGKV3 | Kappa | null | null | null | null | null |
6bt3 | D | C | 0 | M | protein | null | major capsid protein l1 | VIRUS | 12/05/17 | High-Resolution Structure Analysis of Antibody V5 Conformational Epitope on Human Papillomavirus 16 | MUS MUSCULUS; HUMAN PAPILLOMAVIRUS TYPE 16 | mus musculus | mus musculus | human papillomavirus type 16 | Guan, J., Bywaters, S.M., Brendle, S.A., Ashley, R.E., Makhov, A.M., Conway, J.F., Christensen, N.D., Hafenstein, S. | 4.7 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
4q2z | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 04/10/14 | Fab fragment of HIV vaccine-elicited CD4bs-directed antibody, GE356, from a non-human primate | MACACA MULATTA | macaca mulatta | macaca mulatta | null | Navis, M., Tran, K., Bale, S., Phad, G., Guenaga, J., Wilson, R., Soldemo, M., McKee, K., Sundling, C., Mascola, J., Li, Y., Wyatt, R.T., Hedestam, G.B.K. | 1.93 | X-RAY DIFFRACTION | 0.272 | 0.232 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
7o3b | B | null | 0 | H | protein | null | tau-tubulin kinase 2,centrosomal protein of 164 kda | STRUCTURAL PROTEIN | 04/01/21 | Crystal structure of the TTBK2-CEP164 complex bound to a camelid nanobody | CAMELIDAE MIXED LIBRARY; HOMO SAPIENS | camelidae mixed library | null | homo sapiens | e Silva, I.R., van Breugel, M. | 2.4 | X-RAY DIFFRACTION | 0.240 | 0.189 | false | true | IGHV1 | null | null | null | null | null | null | null |
5yd3 | E | e | 0 | F | peptide | null | epitope peptide | IMMUNE SYSTEM | 09/11/17 | Crystal structure of the scFv antibody 4B08 with epitope peptide | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | null | homo sapiens | Caaveiro, J.M.M., Miyanabe, K., Tsumoto, K. | 1.35 | X-RAY DIFFRACTION | 0.184 | 0.136 | true | true | unknown | unknown | unknown | null | null | null | null | null |
6al0 | H | L | 0 | A | protein | null | pdz tandem fragment with pa tag insertion | SIGNALING PROTEIN | 09/05/18 | The NZ-1 Fab complexed with the PDZ tandem fragment of A. aeolicus S2P homolog with the PA12 tag inserted between the residues 263 and 267 | AQUIFEX AEOLICUS; AQUIFEX AEOLICUS (STRAIN VF5); RATTUS NORVEGICUS | rattus norvegicus | rattus norvegicus | aquifex aeolicus, aquifex aeolicus (strainvf5) | Tamura, R., Oi, R., Kaneko, M.K., Kato, Y., Nogi, T. | 2.6 | X-RAY DIFFRACTION | 0.251 | 0.199 | false | true | IGHV5 | IGLV3 | Lambda | null | null | null | null | null |
3j2y | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 01/28/13 | Electron Cryo-microscopy of Chikungunya VLP in complex with neutralizing antibody Fab 9.8B | MUS MUSCULUS | mus musculus | mus musculus | null | Sun, S., Xiang, Y., Rossmann, M.G. | 14.9 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
6v8z | J | K | 0 | G | protein | null | envelope glycoprotein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 12/12/19 | VRC03 and 10-1074 Bound BG505 F14 HIV-1 SOSIP Envelope Trimer Structure | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Henderson, R., Acharya, P. | 2.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | unknown | unknown | null | null | null | null | null |
7zmp | K | null | 0 | B | protein | null | atp-dependent dna helicase q5 | HYDROLASE | 04/19/22 | Crystal structure of human RECQL5 helicase APO form in complex with engineered nanobody (Gluebody) G3-055 | Homo sapiens; Lama glama | lama glama | null | homo sapiens | Ye, M., Makola, M., Newman, J.A., Fairhead, M., MacLean, E., Krojer, T., Aitkenhead, H., Bountra, C., Gileadi, O., von Delft, F. | 3.626 | X-RAY DIFFRACTION | 0.359 | 0.332 | false | true | IGHV1 | null | null | null | null | null | null | null |
1maj | null | A | 5 | null | null | null | null | IMMUNOGLOBULIN | 09/16/93 | SOLUTION STRUCTURE OF AN ISOLATED ANTIBODY VL DOMAIN | MUS MUSCULUS | null | mus musculus | null | Constantine, K.L., Friedrichs, M.S., Metzler, W.J., Wittekind, M., Hensley, P., Mueller, L. | NOT | SOLUTION NMR | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null |
7cz0 | H | null | 0 | D | protein | null | thermostable green fluorescent protein (tgp) | FLUORESCENT PROTEIN | 09/06/20 | Crystal structure of a thermostable green fluorescent protein (TGP) with a synthetic nanobody (Sb92) | GALAXEA FASCICULARIS; SYNTHETIC CONSTRUCT | synthetic construct | null | galaxea fascicularis | Cai, H., Yao, H., Li, T., Hutter, C., Tang, Y., Li, Y., Seeger, M., Li, D. | 2.77 | X-RAY DIFFRACTION | 0.241 | 0.202 | false | true | IGHV1 | null | null | null | null | null | null | null |
6o89 | null | L | 0 | null | null | null | null | IMMUNE SYSTEM | 03/09/19 | Anti-CD28xCD3 CODV Fab | HOMO SAPIENS | null | homo sapiens | null | Lord, D.M., Wei, R.R. | 2.09 | X-RAY DIFFRACTION | 0.222 | 0.178 | false | true | null | IGKV15 | Kappa | null | null | null | null | null |
5ezo | H | L | 0 | A | protein | null | uncharacterized protein | IMMUNE SYSTEM | 11/26/15 | Crystal Structure of PfCyRPA | PLASMODIUM FALCIPARUM (ISOLATE 3D7); MUS MUSCULUS; HOMO SAPIENS | homo sapiens | mus musculus | plasmodium falciparum (isolate 3d7) | Favuzza, P., Pluschke, G., Rudolph, M.G. | 3.63 | X-RAY DIFFRACTION | 0.330 | 0.274 | false | true | IGHV4 | IGKV6 | Kappa | null | null | null | null | null |
3cm9 | A | L | 4 | null | null | null | null | IMMUNE SYSTEM | 03/21/08 | Solution Structure of Human SIgA2 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Bonner, A., Almogren, A., Furtado, P.B., Kerr, M.A., Perkins, S.J. | NOT | SOLUTION SCATTERING | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
5th9 | H | L | 0 | A | protein | null | matrix metalloproteinase-9,matrix metalloproteinase-9 | hydrolase/hydrolase inhibitor | 09/29/16 | Structure determination of a potent, selective antibody inhibitor of human MMP9 (GS-5745 bound to MMP-9) | ORYCTOLAGUS CUNICULUS; HOMO SAPIENS | oryctolagus cuniculus | oryctolagus cuniculus | homo sapiens | Appleby, T.C., Greenstein, A.E., Kwon, H.J. | 2.999 | X-RAY DIFFRACTION | 0.257 | 0.218 | false | true | IGHV2 | IGKV6 | Kappa | null | null | null | null | null |
5lwf | C | null | 0 | A | protein | null | beta-lactamase | HYDROLASE | 09/16/16 | Structure of a single domain camelid antibody fragment cAb-G10S in complex with the BlaP beta-lactamase from Bacillus licheniformis | BACILLUS LICHENIFORMIS; LAMA GLAMA | lama glama | null | bacillus licheniformis | Vettore, N., Kerff, F., Pain, C., Herman, R., Sauvage, E., Preumont, S., Charlier, P., Dumoulin, M. | 2.56 | X-RAY DIFFRACTION | 0.242 | 0.215 | false | true | IGHV1 | null | null | null | null | null | null | null |
1cfv | H | L | 0 | H | Hapten | E3G | ESTRONE BETA-D-GLUCURONIDE | IMMUNOGLOBULIN | 04/11/97 | MONOCLONAL ANTIBODY FRAGMENT FV4155 FROM E. COLI | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Trinh, C.H., Phillips, S.E.V. | 2.1 | X-RAY DIFFRACTION | 0.247 | 0.178 | false | true | IGHV5 | IGKV1 | Kappa | null | null | null | null | null |
6pci | J | M | 0 | C | protein | null | virion spike glycoprotein | immune system, viral protein | 06/17/19 | EBOV GPdMuc (Makona) in complex with rEBOV-520 and rEBOV-548 Fabs | EBOLA VIRUS; HOMO SAPIENS; ZAIRE EBOLAVIRUS | homo sapiens | homo sapiens | ebola virus | Ward, A.B., Murin, C.D., Alkutkar, T. | 4.12 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5y2k | C | D | 0 | null | null | null | null | IMMUNE SYSTEM | 07/26/17 | A human antibody AF4H1L1 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Xiao, H., Qi, J., Gao, F.G. | 2.1 | X-RAY DIFFRACTION | 0.259 | 0.220 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
7oay | H | null | 0 | G | protein | null | unknown | ANTIVIRAL PROTEIN | 04/20/21 | Nanobody F2 bound to RBD | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; LAMA GLAMA | null | null | null | Naismith, J.H., Mikolajek, H. | 2.34 | X-RAY DIFFRACTION | 0.228 | 0.192 | false | false | IGHV1 | null | null | null | null | null | null | null |
2ltq | F | E | 6 | D | protein | null | disulfide bond formation protein b | MEMBRANE PROTEIN, OXIDOREDUCTASE | 05/30/12 | High resolution structure of DsbB C41S by joint calculation with solid-state NMR and X-ray data | ESCHERICHIA COLI; MUS MUSCULUS | mus musculus | mus musculus | escherichia coli | Tang, M., Sperling, L.J., Schwieters, C.D., Nesbitt, A.E., Gennis, R.B., Rienstra, C.M. | NOT | SOLID-STATE NMR | null | null | false | false | IGHV5 | IGKV8 | Kappa | null | null | null | null | null |
6vbp | H | L | 0 | G | peptide | null | envelope glycoprotein gp160 | IMMUNE SYSTEM/Viral Protein | 12/19/19 | Crystal structure of anti-HIV-1 antibody DH815 bound to gp120 V2 peptide | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Janus, B.M., Ofek, G. | 2.298 | X-RAY DIFFRACTION | 0.229 | 0.180 | false | true | IGHV5 | IGKV4 | Kappa | null | null | null | null | null |
4jzo | A | B | 0 | J | peptide | null | envelope glycoprotein e2 | immune system/viral protein | 04/03/13 | Three dimensional structure of broadly neutralizing human anti - Hepatitis C virus (HCV) glycoprotein E2 Fab fragment HC84-27 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | hepatitis c virus (isolate h) | Krey, T., Rey, F.A. | 2.22 | X-RAY DIFFRACTION | 0.236 | 0.196 | false | true | IGHV1 | IGLV3 | Lambda | null | null | null | null | null |
7nqa | D | null | 0 | A | protein | null | nuclear pore complex protein nup96 | NUCLEAR PROTEIN | 03/01/21 | Complex of Nucleoporin-98 and nanobody MS98-27 solved at 1.85A resolution | XENOPUS TROPICALIS; VICUGNA PACOS | vicugna pacos | null | xenopus tropicalis | Sola-Colom, M., Trakhanov, S., Goerlich, D. | 2.2 | X-RAY DIFFRACTION | 0.226 | 0.176 | false | true | IGHV1 | null | null | null | null | null | null | null |
7vsw | F | E | 0 | null | null | null | null | BIOSYNTHETIC PROTEIN | 10/27/21 | Crystal structure of a Fab-like fragment of anti-mesothelin antibody | HOMO SAPIENS | homo sapiens | homo sapiens | null | Yang, Z., Ying, T. | 3.0 | X-RAY DIFFRACTION | 0.253 | 0.217 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
7keo | A | B | 0 | D | C | protein | protein | NA | NA | ubiquitin | ubiquitin | PROTEIN BINDING | 10/11/20 | Crystal structure of K29-linked di-ubiquitin in complex with synthetic antigen binding fragment | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | homo sapiens | Yu, Y., Zheng, Q., Erramilli, S., Pan, M., Kossiakoff, A., Liu, L., Zhao, M. | 2.9 | X-RAY DIFFRACTION | 0.282 | 0.236 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6srv | I | M | 0 | null | null | null | null | PROTEIN BINDING | 09/06/19 | Structure of the arginase-2-inhibitory human antigen-binding fragment Fab C0021144 | HOMO SAPIENS | null | null | null | Burschowsky, D., Addyman, A., Fiedler, S., Groves, M., Haynes, S., Seewooruthun, C., Carr, M. | 2.4 | X-RAY DIFFRACTION | 0.241 | 0.205 | false | false | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
1dee | D | C | 0 | G | protein | null | immunoglobulin g binding protein a | IMMUNE SYSTEM | 11/15/99 | CRYSTAL STRUCTURE AT 2.7A RESOLUTION OF A COMPLEX BETWEEN A STAPHYLOCOCCUS AUREUS DOMAIN AND A FAB FRAGMENT OF A HUMAN IGM ANTIBODY | STAPHYLOCOCCUS AUREUS; HOMO SAPIENS | homo sapiens | homo sapiens | staphylococcus aureus | Graille, M., Stura, E.A., Corper, A.L., Sutton, B.J., Taussig, M.J., Charbonnier, J.B., Silverman, G.J. | 2.7 | X-RAY DIFFRACTION | 0.281 | 0.217 | false | false | IGHV3 | IGKV1 | Kappa | 0 | -8.728352 | Unknown | null | TBD |
7z1c | B | null | 0 | A | protein | null | spike protein s1 | ANTIVIRAL PROTEIN | 02/24/22 | Nanobody H11-B5 and H11-F2 bound to RBD | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; LAMA GLAMA | lama glama | null | severe acute respiratory syndrome coronavirus2 | Mikolajek, H., Naismith, J.H. | 1.9 | X-RAY DIFFRACTION | 0.199 | 0.175 | false | true | IGHV1 | null | null | null | null | null | null | null |
5k9q | X | Y | 0 | R | protein | null | hemagglutinin ha2 | IMMUNE SYSTEM | 06/01/16 | Crystal structure of multidonor HV1-18-class broadly neutralizing Influenza A antibody 16.a.26 in complex with A/Hong Kong/1-4-MA21-1/1968 (H3N2) Hemagglutinin | INFLUENZA A VIRUS; INFLUENZA A VIRUS (STRAIN A/HONG KONG/1/1968 H3N2); HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus (strain a/hong kong/1/1968h3n2) | Joyce, M.G., Thomas, P.V., Wheatley, A.K., McDermott, A.B., Mascola, J.R., Kwong, P.D. | 2.503 | X-RAY DIFFRACTION | 0.218 | 0.182 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6dc3 | H | L | 0 | F | protein | null | rsv fusion glycoprotein | IMMUNE SYSTEM | 05/04/18 | RSV prefusion F bound to RSD5 Fab | HOMO SAPIENS; HUMAN RESPIRATORY SYNCYTIAL VIRUS A (STRAIN A2); HUMAN IMMUNODEFICIENCY VIRUS 1; UNIDENTIFIED | homo sapiens | homo sapiens | human respiratory syncytial virus a (straina2), human immunodeficiency virus 1, unidentified | Battles, M.B., McLellan, J.S., Jones, H.J. | 3.501 | X-RAY DIFFRACTION | 0.205 | 0.183 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
3chn | C | O | 5 | null | null | null | null | IMMUNE SYSTEM | 03/10/08 | Solution structure of human secretory IgA1 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Bonner, A., Almogren, A., Furtado, P.B., Kerr, M.A., Perkins, S.J. | NOT | SOLUTION SCATTERING / HOMOLOGY MODEL | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
1eeq | null | A | 0 | null | null | null | null | IMMUNE SYSTEM | 02/01/00 | M4L/Y(27D)D/T94H Mutant of LEN | HOMO SAPIENS | null | homo sapiens | null | Pokkuluri, P.R., Raffen, R., Dieckman, L., Boogaard, C., Stevens, F.J., Schiffer, M. | 1.5 | X-RAY DIFFRACTION | 0.238 | 0.211 | false | true | null | IGKV4 | Kappa | null | null | null | null | null |
1a7q | H | L | 0 | null | null | null | null | IMMUNOGLOBULIN | 03/16/98 | FV FRAGMENT OF MOUSE MONOCLONAL ANTIBODY D1.3 (BALB/C, IGG1, K) HIGH AFFINITY EXPRESSED VARIANT CONTAINING SER26L->GLY, ILE29L->THR, GLU81L->ASP, THR97L->SER, PRO240H->LEU, ASP258H->ALA, LYS281H->GLU, ASN283H->ASP AND LEU312H->VAL | MUS MUSCULUS | mus musculus | mus musculus | null | Marks, C., Henrick, K., Winter, G. | 2.0 | X-RAY DIFFRACTION | unknown | 0.178 | false | true | IGHV2 | IGKV12 | Kappa | null | null | null | null | null |
4wfg | E | D | 0 | A | protein | null | potassium channel subfamily k member 4 | METAL TRANSPORT | 09/15/14 | Human TRAAK K+ channel in a Tl+ bound conductive conformation | MUS MUSCULUS; HOMO SAPIENS | mus musculus | mus musculus | homo sapiens | Brohawn, S.G., MacKinnon, R. | 3.0 | X-RAY DIFFRACTION | 0.236 | 0.202 | false | true | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
6obc | B | null | 0 | A | protein | null | ricin a chain | TOXIN | 03/20/19 | Ricin A chain bound to camelid | RICINUS COMMUNIS; VICUGNA PACOS | vicugna pacos | null | ricinus communis | Rudolph, M.J. | 1.762 | X-RAY DIFFRACTION | 0.227 | 0.185 | false | true | IGHV1 | null | null | null | null | null | null | null |
7u0d | O | P | 0 | B | protein | null | surface glycoprotein | Vral Protein/IMMUNE SYSTEM | 02/17/22 | Local refinement of cryo-EM structure of the interface of the Omicron RBD in complex with antibodies B-182.1 and A19-46.1 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, T., kwong, P.D. | 4.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6wzm | C | D | 0 | F | protein | null | interleukin-8 | IMMUNE SYSTEM | 05/14/20 | LY3041658 Fab bound to CXCL8 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Durbin, J.D., Druzina, Z. | 2.28 | X-RAY DIFFRACTION | 0.229 | 0.187 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6cnv | H | L | 0 | B | protein | null | envelope glycoprotein | VIRAL PROTEIN | 03/09/18 | INFLUENZA B/BRISBANE HEMAGGLUTININ FAB CR9115 SD84H COMPLEX | INFLUENZA B VIRUS; HUMAN IMMUNODEFICIENCY VIRUS 1; SYNTHETIC CONSTRUCT; HOMO SAPIENS | homo sapiens | homo sapiens | influenza b virus, human immunodeficiency virus1 | Luo, J., Obmolova, G. | 4.1 | X-RAY DIFFRACTION | 0.276 | 0.241 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
6vbg | D | null | 0 | B | protein | null | galactoside permease | PROTEIN TRANSPORT | 12/18/19 | Lactose permease complex with thiodigalactoside and nanobody 9043 | ESCHERICHIA COLI; LAMA GLAMA | lama glama | null | escherichia coli | Kumar, H., Stroud, R.M., Kaback, H.R., Finer-Moore, J., Smirnova, I., Kasho, V., Pardon, E., Steyart, J. | 2.8 | X-RAY DIFFRACTION | 0.275 | 0.239 | false | true | IGHV1 | null | null | null | null | null | null | null |
7zfe | Y | null | 0 | C | protein | null | spike protein s1 | VIRAL PROTEIN | 04/01/22 | SARS-CoV-2 Omicron RBD in complex with Omi-32 Fab and nanobody C1 | LAMA GLAMA; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | lama glama | null | severe acute respiratory syndrome coronavirus2 | Zhou, D., Huo, J., Ren, J., Stuart, D.I. | 3.25 | X-RAY DIFFRACTION | 0.293 | 0.237 | false | true | IGHV1 | null | null | null | null | null | null | null |
6ikm | F | f | 0 | null | null | null | null | ANTIMICROBIAL PROTEIN | 10/16/18 | Crystal structure of SpuE-Spermidine in complex with ScFv5 | PSEUDOMONAS AERUGINOSA; HOMO SAPIENS | pseudomonas aeruginosa | homo sapiens | null | Wu, D., Sun, X. | 3.398 | X-RAY DIFFRACTION | 0.268 | 0.228 | true | true | unknown | unknown | unknown | null | null | null | null | null |
5u4r | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 12/05/16 | Crystal structure of the broadly neutralizing Influenza A antibody VRC 315 53-1A09 Fab. | HOMO SAPIENS | homo sapiens | homo sapiens | null | Joyce, M.G., Andrews, S.F., Mascola, J.R., McDermott, A.B., Kwong, P.D. | 1.762 | X-RAY DIFFRACTION | 0.204 | 0.177 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5usf | C | null | 0 | B | protein | null | tyrosyl-trna synthetase, putative | ligase/ligase inhibitor | 02/13/17 | Leishmania donovani tyrosyl-tRNA synthetase in complex with nanobody and inhibitor | LAMA GLAMA; LEISHMANIA DONOVANI (STRAIN BPK282A1) | lama glama | null | leishmania donovani (strain bpk282a1) | Barros-Alvarez, X., Hol, W.G.J. | 2.75 | X-RAY DIFFRACTION | 0.244 | 0.189 | false | true | IGHV3 | null | null | null | null | null | null | null |
6hjp | G | H | 0 | B | A | protein | protein | NA | NA | hemagglutinin | hemagglutinin | VIRAL PROTEIN | 09/04/18 | Structure of Influenza Hemagglutinin ectodomain (A/duck/Alberta/35/76) in complex with FISW84 Fab Fragment | HOMO SAPIENS; INFLUENZA A VIRUS (STRAIN A/DUCK/ALBERTA/35/1976 H1N1) | homo sapiens | homo sapiens | influenza a virus (straina/duck/alberta/35/1976 h1n1) | influenza a virus (straina/duck/alberta/35/1976 h1n1) | Benton, D.J., Rosenthal, P.B. | 3.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
3k2u | H | L | 0 | A | protein | null | hepatocyte growth factor activator long chain | HYDROLASE/IMMUNE SYSTEM | 09/30/09 | Crystal structure of HGFA in complex with the allosteric inhibitory antibody Fab40 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | homo sapiens | Ganesan, R., Eigenbrot, C., Shia, S. | 2.35 | X-RAY DIFFRACTION | 0.290 | 0.239 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -13.36 | SPR | 25 | 20004165 |
3v0v | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 12/08/11 | Fab WN1 222-5 unliganded | MUS MUSCULUS | mus musculus | mus musculus | null | Gomery, K., Evans, S.V. | 2.13 | X-RAY DIFFRACTION | 0.284 | 0.238 | false | false | IGHV7 | IGKV11 | Kappa | null | null | null | null | null |
4dn3 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 02/08/12 | Crystal structure of anti-mcp-1 antibody cnto888 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Obmolova, G., Teplyakov, A., Malia, T., Grygiel, T., Sweet, R., Snyder L., Gilliland, G. | 2.6 | X-RAY DIFFRACTION | 0.249 | 0.191 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
3a67 | H | L | 0 | Y | protein | null | lysozyme c | IMMUNE SYSTEM/HYDROLASE | 08/24/09 | Crystal Structure of HyHEL-10 Fv mutant LN31D complexed with hen egg white lysozyme | MUS MUSCULUS; GALLUS GALLUS | mus musculus | mus musculus | gallus gallus | Yokota, A., Tsumoto, K., Shiroishi, M., Nakanishi, T., Kondo, H., Kumagai, I. | 1.8 | X-RAY DIFFRACTION | 0.225 | 0.189 | false | true | IGHV3 | IGKV5 | Kappa | 0 | -11.44 | ITC | 30 | 20038580 |
3t0x | null | B | 0 | A | Hapten | DIW | 1-(3-SULFOPROPYL)-4-[(1E,3E)-3-(1,3,3-TRIMETHYL-1,3-DIHYDRO-2H-INDOL-2-YLIDENE)PROP-1-EN-1-YL]QUINOLINIUM | DYE-BINDING PROTEIN | 07/20/11 | Fluorogen Activating Protein M8VLA4(S55P) in complex with dimethylindole red | HOMO SAPIENS | null | homo sapiens | homo sapiens | Stanfield, R., Senutovitch, N., Bhattacharyya, S., Rule, G., Wilson, I.A., Armitage, B., Waggoner, A.S., Berget, P. | 1.96 | X-RAY DIFFRACTION | 0.242 | 0.209 | false | true | null | IGLV1 | Lambda | 0 | -10.913953 | Unknown | null | TBD |
6x1s | A | B | 0 | K | peptide | null | nm23-1-ptza peptide | IMMUNE SYSTEM | 05/19/20 | Structure of pHis Fab (SC1-1) in complex with pHis mimetic peptide | ORYCTOLAGUS CUNICULUS; SYNTHETIC CONSTRUCT | oryctolagus cuniculus | oryctolagus cuniculus | synthetic construct | Kalagiri, R., Stanfield, R.L., Wilson, I.A., Hunter, T. | 1.65 | X-RAY DIFFRACTION | 0.226 | 0.200 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6gv1 | H | L | 0 | A | protein | null | major facilitator superfamily multidrug/h+ antiporter mdfafrom e.coli | TRANSPORT PROTEIN | 06/20/18 | Crystal structure of E.coli Multidrug/H+ antiporter MdfA in outward open conformation with bound Fab fragment | ESCHERICHIA COLI K-12; MUS MUSCULUS | mus musculus | mus musculus | escherichia coli k-12 | Nagarathinam, K., Parthier, C., Stubbs, M.T., Tanabe, M. | 3.4 | X-RAY DIFFRACTION | 0.283 | 0.258 | false | true | IGHV2 | IGKV9 | Kappa | null | null | null | null | null |
2b2x | I | M | 0 | B | protein | null | integrin alpha-1 | Immune system | 09/19/05 | VLA1 RdeltaH I-domain complexed with a quadruple mutant of the AQC2 Fab | RATTUS NORVEGICUS; MUS MUSCULUS | mus musculus | mus musculus | rattus norvegicus | Clark, L.A., Boriack-Sjodin, P.A., Eldredge, J., Fitch, C., Friedman, B., Hanf, K.J., Jarpe, M., Liparoto, S.F., Li, Y., Lugovskoy, A. | 2.2 | X-RAY DIFFRACTION | 0.272 | 0.238 | false | true | IGHV5 | IGKV4 | Kappa | 0 | -11.95 | Other | null | 16597831 |
5fhx | null | L | 0 | null | null | null | null | IMMUNE SYSTEM | 12/22/15 | CRYSTAL STRUCTURE OF CODV IN COMPLEX WITH IL4 AT 2.55 Ang. RESOLUTION. | HOMO SAPIENS | null | homo sapiens | null | Vallee, F., Dupuy, A., Rak, A. | 2.55 | X-RAY DIFFRACTION | 0.249 | 0.184 | false | true | null | IGKV11 | Kappa | 0 | -14.898662 | SPR | null | TBD |
2vit | B | A | 0 | C | protein | null | hemagglutinin | COMPLEX (HEMAGGLUTININ/IMMUNOGLOBULIN) | 12/22/97 | INFLUENZA VIRUS HEMAGGLUTININ, MUTANT WITH THR 155 REPLACED BY ILE, COMPLEXED WITH A NEUTRALIZING ANTIBODY | INFLUENZA A VIRUS (A/X-31(H3N2)); MUS MUSCULUS | mus musculus | mus musculus | influenza a virus (a/x-31(h3n2)) | Bizebard, T., Fleury, D., Gigant, B., Wharton, S.A., Skehel, J.J., Knossow, M. | 3.25 | X-RAY DIFFRACTION | 0.237 | 0.188 | false | false | IGHV2 | IGLV1 | Lambda | null | null | null | null | null |
7buf | H | L | 0 | A | protein | null | dengue virus serotype 2 e protein | VIRUS | 05/13/20 | Cryo-EM structure of Dengue virus serotype 2 complexed with SIgN-3C IgG | HOMO SAPIENS; DENGUE VIRUS 2 | homo sapiens | homo sapiens | dengue virus 2 | Zhang, S., Chew, S.V., Lim, X.N., Ng, T.S., Kostyuchenko, V.A., Lok, S.M. | 6.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
5y2k | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 07/26/17 | A human antibody AF4H1L1 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Xiao, H., Qi, J., Gao, F.G. | 2.1 | X-RAY DIFFRACTION | 0.259 | 0.220 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
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