pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 354
values | r_factor stringclasses 342
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
4ncc | 2 | 1 | 0 | null | null | null | null | IMMUNE SYSTEM | 10/24/13 | Neutralizing antibody to murine norovirus | MUS MUSCULUS | mus musculus | mus musculus | null | Smith, T., Li, M. | 2.49 | X-RAY DIFFRACTION | 0.273 | 0.204 | false | false | IGHV4 | IGKV4 | Kappa | null | null | null | null | null |
7lki | A | B | 0 | C | peptide | null | unknown | VIRUS | 02/02/21 | The crystal structure of Epitope III of HCV envelop protein E2 in complex with antibody 1H8 | MUS MUSCULUS; HEPACIVIRUS C | null | null | null | Deng, L., Zhang, P. | 2.0 | X-RAY DIFFRACTION | 0.294 | 0.245 | false | false | IGHV6 | IGKV1 | Kappa | null | null | null | null | null |
7s0d | M | N | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 08/30/21 | Structure of the SARS-CoV-2 S 6P trimer in complex with neutralizing antibody N-612-014 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Barnes, C.O., Bjorkman, P.J. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5mp5 | H | L | 0 | J | peptide | null | microtubule-associated protein tau | IMMUNE SYSTEM | 12/15/16 | Crystal structure of DC8E8 Fab in the complex with a 14-mer tau peptide at pH 6.5 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | Skrabana, R., Novak, M. | 2.31 | X-RAY DIFFRACTION | 0.277 | 0.235 | false | false | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
1fpt | H | L | 0 | P | peptide | null | fab fragment of an neutralizing antibody for type 1poliovirus | COMPLEX (ANTIBODY/PV-1 FRAGMENT) | 01/26/95 | THREE-DIMENSIONAL STRUCTURE OF THE COMPLEX BETWEEN THE FAB FRAGMENT OF AN NEUTRALIZING ANTIBODY FOR TYPE 1 POLIOVIRUS AND ITS VIRAL EPITOPE | HUMAN POLIOVIRUS 1; MUS MUSCULUS | mus musculus | mus musculus | human poliovirus 1 | Wien, M.W., Hogle, J.M. | 3.0 | X-RAY DIFFRACTION | unknown | 0.230 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6vkn | I | K | 0 | D | B | protein | protein | NA | NA | envelope glycoprotein gp160 | bg505 sosipv5.2 gp41 | VIRAL PROTEIN/Immune System | 01/21/20 | BG505 SOSIP.v5.2.N241.N289 in complex with rhesus macaque Fab RM19R | HUMAN IMMUNODEFICIENCY VIRUS 1; MACACA MULATTA | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Cottrell, C.A., Ward, A.B. | 3.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV3 | Kappa | null | null | null | null | null |
2ih3 | A | B | 0 | C | protein | null | voltage-gated potassium channel | MEMBRANE PROTEIN | 09/25/06 | Ion selectivity in a semi-synthetic K+ channel locked in the conductive conformation | STREPTOMYCES LIVIDANS; MUS MUSCULUS | mus musculus | mus musculus | streptomyces lividans | Valiyaveetil, F.I., Leonetti, M., Muir, T.W., MacKinnon, R. | 1.72 | X-RAY DIFFRACTION | 0.242 | 0.233 | false | false | IGHV1 | IGKV5 | Kappa | null | null | null | null | null |
2z91 | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 09/14/07 | Crystal structure of the Fab fragment of anti-ciguatoxin antibody 10C9 | MUS MUSCULUS | mus musculus | mus musculus | null | Ui, M., Tanaka, Y., Tsumoto, K. | 2.6 | X-RAY DIFFRACTION | 0.270 | 0.220 | false | true | IGHV3 | IGKV4 | Kappa | null | null | null | null | null |
6p7h | A | B | 0 | C | peptide | null | hiv fusion peptide residues (512-519) | IMMUNE SYSTEM | 06/10/20 | Vaccine-elicited NHP FP-targeting neutralizing antibody DF2F-b.04 in complex with HIV fusion peptide (residue 512-519) | PLATYRRHINI; SYNTHETIC CONSTRUCT | platyrrhini | platyrrhini | human immunodeficiency virus 1 | Xu, K., Liu, K., Wang, Y., Kwong, P.D. | 1.782 | X-RAY DIFFRACTION | 0.230 | 0.201 | false | true | IGHV4 | IGKV2 | Kappa | null | null | null | null | null |
7k3b | J | I | 0 | C | D | protein | protein | NA | NA | hemagglutinin | hemagglutinin | VIRAL PROTEIN | 09/10/20 | Structure of full-length influenza HA with a head-binding antibody at pH 5.2, conformation C, central helices splay | INFLUENZA A VIRUS (STRAIN A/HONG KONG/1/1968 H3N2); HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus (strain a/hong kong/1/1968h3n2) | influenza a virus (strain a/hong kong/1/1968h3n2) | Gui, M., Gao, J., Xiang, Y. | 3.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
5gjt | H | L | 0 | B | A | protein | protein | NA | NA | hemagglutinin | hemagglutinin | IMMUNE SYSTEM | 07/01/16 | Crystal structure of H1 hemagglutinin from A/Washington/05/2011 in complex with a neutralizing antibody 3E1 | HOMO SAPIENS; INFLUENZA A VIRUS | homo sapiens | homo sapiens | influenza a virus | influenza a virus | Wang, W., Zhang, T., Ding, J. | 3.1 | X-RAY DIFFRACTION | 0.259 | 0.216 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
6bpe | B | C | 0 | A | protein | null | reticulocyte binding protein 2, putative | CELL INVASION | 11/22/17 | Plasmodium vivax reticulocyte binding protein 2b (PvRBP2b) bound to monoclonal antibody 6H1 | PLASMODIUM VIVAX (STRAIN SALVADOR I); MUS MUSCULUS | mus musculus | mus musculus | plasmodium vivax (strain salvador i) | Gruszczyk, J., Chan, L.J., Tham, W.H. | 3.34 | X-RAY DIFFRACTION | 0.367 | 0.318 | false | false | IGHV5 | IGKV6 | Kappa | null | null | null | null | null |
4x8j | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 12/10/14 | Crystal Structure of murine 12F4 Fab monoclonal antibody against ADAMTS5 | MUS MUSCULUS | mus musculus | mus musculus | null | Larkin, J., Lohr, T.A., Elefante, L., Shearin, J., Matico, R., Su, J.-L., Xue, Y., Liu, F., Genell, C., Miller, R.E., Tran, P.B., Malfait, A.-M., Maier, C.C., Matheny, C.J. | 2.35 | X-RAY DIFFRACTION | 0.234 | 0.217 | false | true | IGHV6 | IGKV6 | Kappa | null | null | null | null | null |
4k3e | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 04/10/13 | Crystal structure of bovine antibody BLV5B8 with ultralong CDR H3 | BOS TAURUS | bos taurus | bos taurus | null | Ekiert, D.C., Wang, F., Wilson, I.A. | 2.2 | X-RAY DIFFRACTION | 0.240 | 0.202 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
6nf2 | V | U | 0 | Q | protein | null | envelope glycoprotein gp120 | IMMUNE SYSTEM | 12/18/18 | Cryo-EM structure of vaccine-elicited antibody 0PV-c.01 in complex with HIV-1 Env BG505 DS-SOSIP and antibodies VRC03 and PGT122 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Gorman, J., Kwong, P.D. | 3.7 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV3 | Kappa | null | null | null | null | null |
2p4a | B | null | 0 | A | protein | null | ribonuclease pancreatic | HYDROLASE/IMMUNE SYSTEM | 03/11/07 | X-ray structure of a camelid affinity matured single-domain vhh antibody fragment in complex with RNASE A | CAMELUS DROMEDARIUS; BOS TAURUS | camelus dromedarius | null | bos taurus | Tereshko, V., Koide, A., Uysal, S., Koide, S. | 1.9 | X-RAY DIFFRACTION | 0.218 | 0.184 | false | true | IGHV1 | null | null | 0 | -13.51 | Other | 30 | 17888451 |
4z5r | Q | P | 0 | G | protein | null | interferon alpha-2 | Cytokine/Immune System | 04/02/15 | Rontalizumab Fab bound to Interferon-a2 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Eigenbrot, C., Maurer, B., Bosanac, I. | 3.0 | X-RAY DIFFRACTION | 0.251 | 0.223 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -14.658431 | SPR | null | TBD |
1n5y | H | L | 0 | B | protein | null | reverse transcriptase | TRANSFERASE/IMMUNE SYSTEM/DNA | 11/07/02 | HIV-1 Reverse Transcriptase Crosslinked to Post-Translocation AZTMP-Terminated DNA (Complex P) | HUMAN IMMUNODEFICIENCY VIRUS 1; MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | human immunodeficiency virus 1 | Sarafianos, S.G., Clark Jr., A.D., Das, K., Tuske, S., Birktoft, J.J., Ilankumaran, P., Ramesha, A.R., Sayer, J.M., Jerina, D.M., Boyer, P.L., Hughes, S.H., Arnold, E. | 3.1 | X-RAY DIFFRACTION | 0.285 | 0.255 | false | false | IGHV8 | IGKV10 | Kappa | null | null | null | null | null |
6rpj | F | null | 0 | E | protein | null | cytotoxic t-lymphocyte protein 4 | IMMUNE SYSTEM | 05/14/19 | A Non-blocking anti-CTLA-4 Nanobody complexed with CTLA-4 | HOMO SAPIENS; CAMELUS BACTRIANUS | camelus bactrianus | null | homo sapiens | Gao, H., Zhou, A., Zhang, F. | 3.25 | X-RAY DIFFRACTION | 0.262 | 0.249 | false | true | IGHV1 | null | null | null | null | null | null | null |
6kdh | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 07/02/19 | Antibody 64M-5 Fab including isoAsp in ligand-free form | MUS MUSCULUS | mus musculus | mus musculus | null | Yokoyama, H., Mizutani, R., Noguchi, S., Hayashida, N. | 2.47 | X-RAY DIFFRACTION | 0.253 | 0.194 | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
3zdy | E | F | 0 | C | protein | null | integrin alpha-iib | CELL ADHESION/IMMUNE SYSTEM/PEPTIDE | 12/03/12 | Integrin alphaIIB beta3 headpiece and RGD peptide complex | HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | Zhu, J.H., Zhu, J.Q., Springer, T.A. | 2.45 | X-RAY DIFFRACTION | 0.2156 | 0.1820 | false | true | IGHV14 | IGKV14 | Kappa | null | null | null | null | null |
7kmg | D | E | 0 | F | protein | null | spike protein s1 | IMMUNE SYSTEM/VIRAL PROTEIN | 11/02/20 | LY-CoV555 neutralizing antibody against SARS-CoV-2 | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Hendle, J., Pustilnik, A., Sauder, J.M., Coleman, K.A., Boyles, J.S., Dickinson, C.D. | 2.16 | X-RAY DIFFRACTION | 0.257 | 0.209 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7oo2 | A | B | 0 | null | null | null | null | ANTIMICROBIAL PROTEIN | 05/26/21 | Crystal structure of an antibody targeting the capsular polysaccharide of serogroup X Neisseria meningitidis (MenX) | MUS MUSCULUS | mus musculus | mus musculus | null | Pietri, G.P., de Ruyck, J., Lenac, T., Adamo, R., Bouckaert, J. | 2.16 | X-RAY DIFFRACTION | 0.262 | 0.213 | false | true | IGHV2 | IGKV17 | Kappa | null | null | null | null | null |
1qac | null | A | 0 | null | null | null | null | IMMUNE SYSTEM | 02/25/99 | CHANGE IN DIMERIZATION MODE BY REMOVAL OF A SINGLE UNSATISFIED POLAR RESIDUE | HOMO SAPIENS | null | homo sapiens | null | Pokkuluri, P.R., Cai, X., Johnson, G., Stevens, F.J., Schiffer, M. | 1.8 | X-RAY DIFFRACTION | 0.226 | 0.193 | false | true | null | IGKV4 | Kappa | null | null | null | null | null |
1bre | null | E | 0 | null | null | null | null | IMMUNOGLOBULIN | 07/19/95 | IMMUNOGLOBULIN LIGHT CHAIN PROTEIN | HOMO SAPIENS | null | homo sapiens | null | Schormann, N., Benson, M.D. | 2.0 | X-RAY DIFFRACTION | 0.337 | 0.218 | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
6njn | O | N | 0 | D | protein | null | glutamate receptor 2 | MEMBRANE PROTEIN | 01/03/19 | structure of a complex | MUS MUSCULUS; RATTUS NORVEGICUS | mus musculus | mus musculus | rattus norvegicus | Gouaux, E., Zhao, Y. | 6.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV2 | IGKV10 | Kappa | null | null | null | null | null |
5kn5 | A | B | 0 | C | peptide | null | protransforming growth factor alpha | IMMUNE SYSTEM | 06/27/16 | TGFalpha/Epiregulin complex with neutralizing antibody LY3016859 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | homo sapiens | Atwell, S., Boyles, J.S., Clawson, D.K., Druzina, Z., Josef, G.H., Weichert, K., Witcher, D.R. | 2.8 | X-RAY DIFFRACTION | 0.263 | 0.206 | false | true | IGHV1 | IGKV4 | Kappa | 0 | -13.630708 | Unknown | null | TBD |
5eoc | H | L | 0 | P | peptide | null | ala-cys-gln-leu-ile-asn-thr-asn-gly-ser-trp-his-ile-cys | IMMUNE SYSTEM | 11/10/15 | Crystal structure of Fab C2 in complex with a Cyclic variant of Hepatitis C Virus E2 epitope I | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | hepatitis c virus | Berisio, R., Ruggiero, A., Sandomenico, A., Patel, A.H., Ruvo, M., Vitagliano, L. | 1.98 | X-RAY DIFFRACTION | 0.266 | 0.234 | false | false | IGHV1 | IGKV3 | Kappa | 0 | -10.257147 | Unknown | null | TBD |
1f2x | K | null | 0 | null | null | null | null | IMMUNE SYSTEM | 05/30/00 | STRUCTURE OF THE SINGLE-DOMAIN CAMELID ANTIBODY CAB-CA05 | CAMELUS DROMEDARIUS | camelus dromedarius | null | null | Decanniere, K., Muyldermans, S., Wyns, L. | 2.1 | X-RAY DIFFRACTION | 0.270 | 0.190 | false | true | IGHV1 | null | null | null | null | null | null | null |
3hnv | H | L | 0 | H | carbohydrate | AXR | polysaccharide | IMMUNE SYSTEM | 06/01/09 | CS-35 Fab Complex with Oligoarabinofuranosyl Tetrasaccharide (branch part of Hexasaccharide) | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Murase, T., Zheng, R.B., Joe, M., Bai, Y., Marcus, S.L., Lowary, T.L., Ng, K.K.S. | 2.0 | X-RAY DIFFRACTION | 0.230 | 0.174 | false | false | IGHV1 | IGKV10 | Kappa | null | null | null | null | null |
2kqn | null | A | 13 | null | null | null | null | IMMUNE SYSTEM | 11/11/09 | Solution structure of the AL-09 H87Y immunoglobulin light chain variable domain | HOMO SAPIENS | null | homo sapiens | null | Volkman, B.F., Peterson, F.C., Ramirez-Alvarado, M., Baden, E.M. | NOT | SOLUTION NMR | null | null | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
7dv4 | F | null | 0 | E | protein | null | cytotoxic t-lymphocyte protein 4 | IMMUNE SYSTEM | 01/12/21 | Crystal structure of anti-CTLA-4 VH domain in complex with human CTLA-4 | HOMO SAPIENS | homo sapiens | null | homo sapiens | Li, H., Gan, X., He, Y. | 2.38 | X-RAY DIFFRACTION | 0.258 | 0.221 | false | true | IGHV3 | null | null | null | null | null | null | null |
4p3d | A | B | 0 | C | peptide | null | matrix metalloproteinase-14 | IMMUNE SYSTEM | 03/07/14 | MT1-MMP:Fab complex (Form II) | MUS MUSCULUS; HOMO SAPIENS | mus musculus | mus musculus | homo sapiens | Rozenberg, H., Udi, Y., Sagi, I. | 1.949 | X-RAY DIFFRACTION | 0.210 | 0.158 | false | true | IGHV5 | IGKV1 | Kappa | null | null | null | null | null |
6pe9 | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 06/20/19 | Crystal Structure of CD40 complexed to FAB516 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Argiriadi, M.A. | 3.13 | X-RAY DIFFRACTION | 0.255 | 0.216 | false | true | IGHV3 | IGKV4 | Kappa | null | null | null | null | null |
7n3f | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 06/01/21 | Crystal structure of an anti-SARS-CoV-2 human neutralizing antibody Fab fragment C080 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Flyak, A.I., Bjorkman, P.J., Barnes, C.O. | 1.9 | X-RAY DIFFRACTION | 0.221 | 0.186 | false | true | IGHV5 | IGLV1 | Lambda | null | null | null | null | null |
7dfl | C | c | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(q) subunit alpha | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 11/09/20 | Cryo-EM structure of histamine H1 receptor Gq complex | HOMO SAPIENS | homo sapiens | null | homo sapiens | homo sapiens | He, Y., Xia, R., Wang, N., Xu, Z. | 3.3 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
6orq | J | K | 0 | I | protein | null | rc1 variant of hiv-1 env glycoprotein gp120 | VIRAL PROTEIN/Immune System | 04/30/19 | Modified BG505 SOSIP-based immunogen RC1 in complex with the elicited V3-glycan patch antibody Ab275MUR | HUMAN IMMUNODEFICIENCY VIRUS 1; MUS MUSCULUS | mus musculus | mus musculus | human immunodeficiency virus 1 | Abernathy, M.E., Gristick, H.B., Bjorkman, P.J. | 4.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV5 | IGKV3 | Kappa | null | null | null | null | null |
7wv9 | S | s | 0 | A | C | B | protein | protein | protein | NA | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-2 | guanine nucleotide-binding protein g(i)/g(s)/g(o) subunitgamma-2 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 02/10/22 | Cryo-EM structure of human receptor with G proteins | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | homo sapiens | homo sapiens | Qin, J., Cai, Y., Xu, Z., Ming, Q., Ji, S.Y., Wu, C., Zhang, H., Mao, C., Shen, D.D., Hirata, K., Ma, Y., Yan, W., Zhang, Y., Shao, Z. | 3.36 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
4xtr | C | D | 0 | B | protein | null | atpase get3 | HYDROLASE/TRANSPORT PROTEIN | 01/23/15 | Structure of Get3 bound to the transmembrane domain of Pep12 | HOMO SAPIENS, SYNTHETIC CONSTRUCT; SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C); SACCHAROMYCES CEREVISIAE | homo sapiens, synthetic construct | homo sapiens, synthetic construct | saccharomyces cerevisiae (strain atcc 204508 /s288c) | Mateja, A., Paduch, M., Chang, H.-Y., Szydlowska, A., Kossiakoff, A.A., Hegde, R.S., Keenan, R.J. | 2.05 | X-RAY DIFFRACTION | 0.216 | 0.187 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7jwg | H | L | 0 | C | protein | null | outer surface protein a | IMMUNE SYSTEM | 08/25/20 | OspA-Fab 221-7 complex structure | HOMO SAPIENS; BORRELIA BURGDORFERI (STRAIN ATCC 35210 / B31 / CIP 102532 / DSM 4680) | homo sapiens | homo sapiens | borrelia burgdorferi (strain atcc 35210 / b31 /cip 102532 / dsm 4680) | Rudolph, M.J. | 3.05 | X-RAY DIFFRACTION | 0.306 | 0.269 | false | true | IGHV5 | IGKV1 | Kappa | null | null | null | null | null |
7n8q | H | L | 0 | G | protein | null | clade a/e 93th057 hiv-1 gp120 core | IMMUNE SYSTEM | 06/15/21 | Rhesusized RV305 DH677.3 Fab bound to Clade A/E 93TH057 HIV-1 gp120 core. | HUMAN IMMUNODEFICIENCY VIRUS 1; MACACA MULATTA; SYNTHETIC CONSTRUCT | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | Tolbert, W.D., Pazgier, M. | 2.9 | X-RAY DIFFRACTION | 0.296 | 0.255 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6elu | B | C | 0 | A | protein | null | serum resistance associated; vsg protein | ANTITOXIN | 09/29/17 | Structure of Serum Resistance Associated protein from T. b. rhodesiense | TRYPANOSOMA BRUCEI RHODESIENSE; MUS MUSCULUS | mus musculus | mus musculus | trypanosoma brucei rhodesiense | Zoll, S., Higgins, M.K. | 2.3 | X-RAY DIFFRACTION | 0.220 | 0.191 | false | true | IGHV7 | IGKV3 | Kappa | null | null | null | null | null |
4hs8 | H | L | 0 | A | peptide | null | e2-peptide | IMMUNE SYSTEM | 10/29/12 | Hepatitus C envelope glycoprotein E2 fragment 412-423 with humanized and affinity-matured antibody hu5B3.v3 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | hepatitis c virus | Eigenbrot, C., Ultsch, M. | 2.6 | X-RAY DIFFRACTION | 0.264 | 0.222 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -10.80593 | Unknown | null | TBD |
7z1a | F | null | 0 | A | protein | null | spike protein s1 | ANTIVIRAL PROTEIN | 02/24/22 | Nanobody H11 and F2 bound to RBD | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; LAMA GLAMA | lama glama | null | severe acute respiratory syndrome coronavirus2 | Mikolajek, H., Naismith, J.H. | 2.59 | X-RAY DIFFRACTION | 0.241 | 0.208 | false | true | IGHV1 | null | null | null | null | null | null | null |
4n1e | null | G | 0 | L | protein | null | lysozyme c | Immune system/Hydrolase | 10/04/13 | Structural evidence for antigen receptor evolution | HOMO SAPIENS; GALLUS GALLUS | null | homo sapiens | gallus gallus | Langley, D.B., Rouet, R., Stock, D., Christ, D. | 2.23 | X-RAY DIFFRACTION | 0.265 | 0.223 | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
4j4p | C | D | 0 | B | protein | null | ig epsilon chain c region | IMMUNE SYSTEM | 02/07/13 | The complex of human IgE-Fc with two bound Fab fragments | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Drinkwater, N., Sutton, B.J. | 2.91 | X-RAY DIFFRACTION | 0.284 | 0.236 | false | true | IGHV6 | IGLV1 | Lambda | 0 | -10.092596 | SPR | null | TBD |
5t0y | I | G | 0 | null | null | null | null | IMMUNE SYSTEM | 08/17/16 | 2A10 Antibody FAB fragment | MUS MUSCULUS | mus musculus | mus musculus | null | Jackson, C.J., Fisher, C. | 3.011 | X-RAY DIFFRACTION | 0.247 | 0.225 | false | true | IGHV9 | IGKV10 | Kappa | null | null | null | null | null |
3b9k | H | L | 0 | B | protein | null | t-cell surface glycoprotein cd8 beta chain | IMMUNE SYSTEM | 11/05/07 | Crystal structure of CD8alpha-beta in complex with YTS 156.7 FAB | MUS MUSCULUS; RATTUS RATTUS | rattus rattus | rattus rattus | mus musculus | Shore, D., Wilson, I.A. | 2.7 | X-RAY DIFFRACTION | 0.284 | 0.235 | false | false | IGHV2 | IGKV19 | Kappa | null | null | null | null | null |
4nug | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 12/03/13 | Crystal structure of HIV-1 broadly neutralizing antibody PGT151 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Blattner, C., Wilson, I.A. | 1.8617 | X-RAY DIFFRACTION | 0.207 | 0.159 | false | true | IGHV3 | IGKV2D | Kappa | null | null | null | null | null |
5ikc | B | A | 0 | M | protein | null | neuronal migration protein doublecortin | TRANSFERASE | 03/03/16 | X-RAY STRUCURE OF THE N-TERMINAL DOMAIN OF HUMAN DOUBLECORTIN in complex with FAB | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Ruf, A., Stihle, M., Benz, J., Thoma, R., Rudolph, M.G. | 2.06 | X-RAY DIFFRACTION | 0.265 | 0.198 | false | true | IGHV14 | IGKV6 | Kappa | 0 | -10.325467 | SPR | null | TBD |
6p60 | C | D | 0 | F | peptide | null | hiv fusion peptide residue 512-519 | IMMUNE SYSTEM | 06/03/20 | Vaccine-elicited NHP FP-targeting neutralizing antibody A12V163-a.02 in complex with HIV fusion peptide (residue 512-519) | PLATYRRHINI; SYNTHETIC CONSTRUCT | platyrrhini | platyrrhini | human immunodeficiency virus 1 | Xu, K., Liu, K., Kwong, P.D. | 2.498 | X-RAY DIFFRACTION | 0.209 | 0.197 | false | true | IGHV4 | IGLV1 | Lambda | null | null | null | null | null |
6ysq | C | null | 0 | A | protein | null | complement c4-b,complement c4-b | IMMUNE SYSTEM | 04/23/20 | The hC4Nb8 complement inhibitory nanobody in complex with C4b | ESCHERICHIA COLI; HOMO SAPIENS | null | null | homo sapiens | Zarantonello, A., Laursen, N.S., Andersen, G.R. | 3.3 | X-RAY DIFFRACTION | 0.272 | 0.221 | false | true | IGHV1 | null | null | null | null | null | null | null |
3qxv | E | null | 0 | E | Hapten | MTX | METHOTREXATE | IMMUNE SYSTEM | 03/02/11 | Structure of an Anti-Methotrexate CDR1-4 Graft VHH Antibody in Complex with Methotrexate | LAMA GLAMA | lama glama | null | lama glama | Fanning, S.W., Horn, J.R. | 2.5 | X-RAY DIFFRACTION | 0.279 | 0.230 | false | true | IGHV1 | null | null | 0 | -11.45684 | Unknown | null | TBD |
6n16 | A | B | 0 | E | peptide | null | hiv fusion peptide (512-519) | IMMUNE SYSTEM | 11/08/18 | Vaccine-elicited NHP FP-targeting neutralizing antibody 0PV-b.01 in complex with HIV fusion peptide (residue 512-519) | PLATYRRHINI; SYNTHETIC CONSTRUCT | platyrrhini | platyrrhini | human immunodeficiency virus 1 | Xu, K., Wang, Y., Kwong, P.D. | 2.302 | X-RAY DIFFRACTION | 0.274 | 0.222 | false | true | IGHV4 | IGKV2 | Kappa | null | null | null | null | null |
4odt | H | L | 0 | H | carbohydrate | GP1 | polysaccharide | IMMUNE SYSTEM | 01/10/14 | Fab Structure of lipid A-specific antibody S1-15 in complex with lipid A carbohydrate backbone | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Haji-Ghassemi, O., Evans, S.V. | 1.95 | X-RAY DIFFRACTION | 0.224 | 0.197 | false | false | IGHV10 | IGKV10 | Kappa | null | null | null | null | null |
5wko | I | J | 0 | R | O | protein | protein | NA | NA | hemagglutinin | hemagglutinin | ANTIVIRAL PROTEIN | 07/25/17 | Crystal structure of antibody 27F3 recognizing the HA from A/California/04/2009 (H1N1) influenza virus | HOMO SAPIENS; INFLUENZA A VIRUS | homo sapiens | homo sapiens | influenza a virus | influenza a virus | Wilson, A., Lang, S., Zhu, X. | 3.492 | X-RAY DIFFRACTION | 0.268 | 0.246 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
5tkk | H | L | 0 | A | peptide | null | hiv-1 fusion peptide residue 512-519 | IMMUNE SYSTEM | 10/06/16 | Structure of mouse vaccination-elicited HIV neutralizing antibody vFP5.01 in complex with HIV-1 fusion peptide residue 512-519 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | human immunodeficiency virus 1 | Xu, K., Liu, K., Kwong, P.D. | 1.55 | X-RAY DIFFRACTION | 0.247 | 0.209 | false | true | IGHV3 | IGKV6 | Kappa | 0 | -11.291227 | Unknown | null | TBD |
4lri | P | A | 0 | null | null | null | null | Immune System | 07/19/13 | Anti CMV Fab Fragment | HOMO SAPIENS | homo sapiens | homo sapiens | null | Stengel, K.F. | 1.65 | X-RAY DIFFRACTION | 0.212 | 0.187 | false | true | IGHV3 | IGKV2 | Kappa | null | null | null | null | null |
1e6o | H | L | 0 | null | null | null | null | IMMUNOGLOBULIN | 08/21/00 | Crystal structure of Fab13B5 against HIV-1 capsid protein p24 | MUS MUSCULUS | mus musculus | mus musculus | null | Monaco-Malbet, S., Berthet-Colominas, C., Novelli, A., Battai, N., Piga, N., Mallet, F., Cusack, S. | 1.8 | X-RAY DIFFRACTION | 0.255 | 0.225 | false | false | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
6oq8 | D | null | 0 | A | protein | null | toxin b | TOXIN | 04/25/19 | Structure of the GTD domain of Clostridium difficile toxin B in complex with VHH 7F | CLOSTRIDIOIDES DIFFICILE; CAMELIDAE | camelidae | null | clostridioides difficile | Chen, P., Lam, K., Jin, R. | 2.2 | X-RAY DIFFRACTION | 0.220 | 0.197 | false | true | IGHV1 | null | null | null | null | null | null | null |
1fsk | C | B | 0 | A | protein | null | major pollen allergen bet v 1-a | IMMUNE SYSTEM | 09/11/00 | COMPLEX FORMATION BETWEEN A FAB FRAGMENT OF A MONOCLONAL IGG ANTIBODY AND THE MAJOR ALLERGEN FROM BIRCH POLLEN BET V 1 | BETULA PENDULA; MUS MUSCULUS | mus musculus | mus musculus | betula pendula | Mirza, O., Henriksen, A., Ipsen, H., Larsen, J., Wissenbach, M., Spangfort, M., Gajhede, M. | 2.9 | X-RAY DIFFRACTION | 0.285 | 0.253 | false | true | IGHV1 | IGKV6 | Kappa | 0 | -13.12374 | Unknown | null | TBD |
5cd3 | E | F | 0 | null | null | null | null | IMMUNE SYSTEM | 07/02/15 | Structure of immature VRC01-class antibody DRVIA7 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Kong, L., Wilson, I.A. | 2.9 | X-RAY DIFFRACTION | 0.284 | 0.234 | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null |
1rur | H | L | 0 | null | null | null | null | immune system | 12/11/03 | Crystal Structure (I) of native Diels-Alder antibody 13G5 Fab at pH 8.0 with a data set collected at SSRL beamline 9-1. | MUS MUSCULUS | mus musculus | mus musculus | null | Zhu, X., Wentworth Jr., P., Wentworth, A.D., Eschenmoser, A., Lerner, R.A., Wilson, I.A. | 1.5 | X-RAY DIFFRACTION | unknown | unknown | false | false | IGHV1 | IGKV2 | Kappa | null | null | null | null | null |
7lyv | E | F | 0 | null | null | null | null | IMMUNE SYSTEM | 03/08/21 | Crystal structure of the HCMV pentamer-specific antibody 1-103 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Wrapp, D., Jones, H.G., McLellan, J.S. | 1.9 | X-RAY DIFFRACTION | 0.217 | 0.191 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
4xgz | Q | R | 0 | q | peptide | null | unknown | CELL ADHESION | 01/04/15 | Crystal structure of human paxillin LD2 motif in complex with Fab fragment | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | homo sapiens | Nocula-Lugowska, M., Lugowski, M., Salgia, R., Kossiakoff, A.A. | 2.5 | X-RAY DIFFRACTION | 0.245 | 0.228 | false | true | IGHV3 | IGKV1 | Kappa | 0 | -10.395252 | Unknown | null | TBD |
2ajy | H | L | 0 | L | Hapten | ECG | 3-HYDROXY-8-METHYL-8-AZA-BICYCLO[3.2.1]OCTANE-2-CARBOXYLIC ACID METHYL ESTER | IMMUNE SYSTEM | 08/02/05 | Crystal Structure of Cocaine catalytic Antibody 7A1 Fab' in Complex with ecgonine methyl ester and benzoic acid | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Zhu, X., Wilson, I.A. | 2.1 | X-RAY DIFFRACTION | 0.246 | 0.225 | false | false | IGHV3 | IGKV2 | Kappa | null | null | null | null | null |
7mw2 | H | L | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN/Immune System | 05/15/21 | Structure of the SARS-CoV-2 Spike trimer with all RBDs down in complex with the Fab fragment of human neutralizing antibody clone 6 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Hu, Y., Xiong, Y. | 2.97 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
5jz7 | G | I | 0 | F | protein | null | beta-nerve growth factor | SIGNALING PROTEIN | 05/16/16 | NGF IN COMPLEX WITH MEDI578 scFv | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Olsson, L.-L., Aagaard, A. | 3.4 | X-RAY DIFFRACTION | 0.268 | 0.258 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
2iff | H | L | 0 | Y | protein | null | hen egg white lysozyme | IMMUNOGLOBULIN/HYDROLASE(O-GLYCOSYL) | 02/03/94 | STRUCTURE OF AN ANTIBODY-LYSOZYME COMPLEX: EFFECT OF A CONSERVATIVE MUTATION | MUS MUSCULUS; GALLUS GALLUS | mus musculus | mus musculus | gallus gallus | Chacko, S., Davies, D.R. | 2.65 | X-RAY DIFFRACTION | unknown | unknown | false | true | IGHV1 | IGKV4 | Kappa | 0 | -10.913953 | Unknown | null | TBD |
7r20 | B | null | 0 | null | null | null | null | IMMUNE SYSTEM | 02/03/22 | Anti-Arc nanobody E5 | VICUGNA PACOS | vicugna pacos | null | null | Markusson, S., Kursula, P. | 1.42 | X-RAY DIFFRACTION | 0.237 | 0.185 | false | true | IGHV1 | null | null | null | null | null | null | null |
7ekk | H | L | 0 | P | peptide | null | mper region of the envelope glycoprotein gp41 from hiv-1 | IMMUNE SYSTEM | 04/05/21 | Anti-HIV-1 broadly neutralizing antibody delta-loop 4E10 modified with pyrene acetamide | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Caaveiro, J.M.M., Rujas, E., Nieva, J.L. | 1.7 | X-RAY DIFFRACTION | 0.192 | 0.158 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
1yym | R | Q | 0 | P | protein | null | exterior membrane glycoprotein(gp120) | Viral protein/Immune system | 02/25/05 | crystal structure of F23, a scorpion-toxin mimic of CD4, in complex with HIV-1 YU2 gp120 envelope glycoprotein and anti-HIV-1 antibody 17b | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Huang, C.C., Stricher, F., Martin, L., Decker, J.M., Majeed, S., Barthe, P., Hendrickson, W.A., Robinson, J., Roumestand, C., Sodroski, J., Wyatt, R., Shaw, G.M., Vita, C., Kwong, P.D. | 2.2 | X-RAY DIFFRACTION | 0.268 | 0.209 | false | true | IGHV1 | IGKV3 | Kappa | 0.000009 | -6.85286 | SPR | null | TBD |
7e5r | X | S | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 02/20/21 | SARS-CoV-2 S trimer with three-antibody cocktail complex | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Sun, Y., Wang, L., Wang, N., Feng, R., Wang, X. | 3.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
5jor | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 05/02/16 | Crystal structure of unbound anti-glycan antibody Fab14.22 at 2.2 A | MUS MUSCULUS | mus musculus | mus musculus | null | Sarkar, A., Irimia, A., Teyton, L., Wilson, I.A. | 2.206 | X-RAY DIFFRACTION | 0.237 | 0.205 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
4fqv | I | M | 0 | F | E | protein | protein | NA | NA | hemagglutinin ha2 | hemagglutinin ha1 | VIRAL PROTEIN/IMMUNE SYSTEM | 06/25/12 | Crystal structure of broadly neutralizing antibody CR9114 bound to H7 influenza hemagglutinin | INFLUENZA A VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus | influenza a virus | Ekiert, D.C., Dreyfus, C., Wilson, I.A. | 5.75 | X-RAY DIFFRACTION | 0.339 | 0.314 | false | true | IGHV1 | IGLV1 | Lambda | 0 | -12.221727 | BLI | null | TBD |
7cvs | E | F | 0 | B | protein | null | h(+)/cl(-) exchange transporter clca | TRANSPORT PROTEIN | 08/27/20 | Crystal structure of the C85A/L194A mutant CLC-ec1 with Fab fragment | ESCHERICHIA COLI MS 198-1; MUS MUSCULUS | mus musculus | mus musculus | escherichia coli ms 198-1 | Park, K., Mersch, K., Robertson, J., Lim, H.-H. | 3.01 | X-RAY DIFFRACTION | 0.255 | 0.201 | false | true | IGHV4 | IGKV4 | Kappa | null | null | null | null | null |
6qfa | O | null | 0 | A | protein | null | gamma-aminobutyric acid receptor subunit beta-3,gamma-aminobutyric acid receptor subunit beta-3 | MEMBRANE PROTEIN | 01/09/19 | CryoEM structure of a beta3K279T GABA(A)R homomer in complex with histamine and megabody Mb25 | HOMO SAPIENS; HELICOBACTER PYLORI (STRAIN G27); LAMA GLAMA | helicobacter pylori (strain g27), lama glama | null | homo sapiens | Uchanski, T., Masiulis, S., Fischer, B., Kalichuk, V., Wohlkoening, A., Zoegg, T., Remaut, H., Vranken, W., Aricescu, A.R., Pardon, E., Steyaert, J. | 2.49 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
3cfj | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 03/04/08 | Crystal structure of catalytic elimination antibody 34E4, orthorhombic crystal form | MUS MUSCULUS, HOMO SAPIENS | mus musculus, homo sapiens | mus musculus, homo sapiens | null | Debler, E.W., Wilson, I.A. | 2.6 | X-RAY DIFFRACTION | 0.253 | 0.199 | false | true | IGHV4 | IGLV1 | Lambda | null | null | null | null | null |
1hys | D | C | 0 | B | protein | null | hiv-1 reverse transcriptase | TRANSFERASE/DNA-RNA HYBRID | 01/22/01 | CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH A POLYPURINE TRACT RNA:DNA | HUMAN IMMUNODEFICIENCY VIRUS 1; MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | human immunodeficiency virus 1 | Sarafianos, S.G., Das, K., Tantillo, C., Clark Jr., A.D., Ding, J., Whitcomb, J., Boyer, P.L., Hughes, S.H., Arnold, E. | 3.0 | X-RAY DIFFRACTION | 0.316 | 0.274 | false | false | IGHV8 | IGKV10 | Kappa | null | null | null | null | null |
6tkc | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 11/28/19 | ChiLob 7/4 H2 HC-C225S F(ab')2 | HOMO SAPIENS | null | null | null | Orr, C.M., Fisher, H., Tews, I. | 2.3 | X-RAY DIFFRACTION | 0.236 | 0.183 | false | false | IGHV1 | IGKV10 | Kappa | null | null | null | null | null |
6dbd | D | null | 0 | null | null | null | null | IMMUNE SYSTEM | 05/03/18 | Crystal Structure of VHH R326 | LAMA GLAMA | lama glama | null | null | Brooks, C.L., Toride King, M., Huh, I. | 1.755 | X-RAY DIFFRACTION | 0.182 | 0.160 | false | true | unknown | unknown | unknown | null | null | null | null | null |
4xmn | H | L | 0 | E | protein | null | nucleoporin nup120 | PROTEIN TRANSPORT | 01/14/15 | Structure of the yeast coat nucleoporin complex, space group P212121 | SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C); SACCHAROMYCES CEREVISIAE; HOMO SAPIENS, SYNTHETIC CONSTRUCT | homo sapiens, synthetic construct | homo sapiens, synthetic construct | saccharomyces cerevisiae (strain atcc 204508 /s288c) | Stuwe, T., Correia, A.R., Lin, D.H., Paduch, M., Lu, V.T., Kossiakoff, A.A., Hoelz, A. | 7.6 | X-RAY DIFFRACTION | 0.347 | 0.318 | false | true | IGHV3 | IGKV1D | Kappa | null | null | null | null | null |
1mcj | null | B | 0 | P | peptide | null | peptide n-acetyl-d-phe-l-his-d-pro-nh2 | IMMUNOGLOBULIN | 02/25/93 | PRINCIPLES AND PITFALLS IN DESIGNING SITE DIRECTED PEPTIDE LIGANDS | HOMO SAPIENS | null | homo sapiens | null | Edmundson, A.B., Harris, D.L., Fan, Z.-C., Guddat, L.W. | 2.7 | X-RAY DIFFRACTION | unknown | unknown | false | true | null | IGLV2 | Lambda | null | null | null | null | null |
7pbd | F | null | 0 | C | B | protein | protein | NA | NA | gamma-aminobutyric acid receptor subunit beta-3,gamma-aminobutyric acid receptor subunit beta-3 | gamma-aminobutyric acid receptor subunit beta-3,gamma-aminobutyric acid receptor subunit beta-3 | MEMBRANE PROTEIN | 08/02/21 | a1b3 GABA-A receptor + GABA | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | homo sapiens | Miller, P.S., Kasaragod, V.B. | 3.04 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
6vmk | f | e | 0 | g | protein | null | unknown | HYDROLASE/IMMUNE SYSTEM | 01/28/20 | Crystal structure of human Complement Factor D with anti-Factor D Fab 20D12 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Wu, P., Harris, S.F., Eigenbrot, C. | 3.01 | X-RAY DIFFRACTION | 0.215 | 0.174 | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
4nrx | D | E | 0 | null | null | null | null | IMMUNE SYSTEM | 11/27/13 | Crystal Structure of HIV-1 Neutralizing Antibody m66 in complex with gp41 MPER peptide | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | null | Ofek, G., Yang, Y., Kwong, P.D. | 2.21 | X-RAY DIFFRACTION | 0.215 | 0.188 | false | true | IGHV5 | IGKV1 | Kappa | null | null | null | null | null |
7x6l | I | K | 0 | B | D | protein | protein | NA | NA | hemagglutinin | hemagglutinin | STRUCTURAL PROTEIN | 03/07/22 | Cryo-EM structure of H3 hemagglutinin from A/HongKong/01/1968 in complex with a neutralizing antibody 28-12 | HOMO SAPIENS; INFLUENZA A VIRUS (A/HONG KONG/1/1968(H3N2)); INFLUENZA A VIRUS | homo sapiens | homo sapiens | influenza a virus | influenza a virus (a/hong kong/1/1968(h3n2)) | Cong, Y., Liu, C.X. | 3.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7a29 | F | null | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN | 08/16/20 | Cryo-EM structure of the SARS-CoV-2 spike protein bound to neutralizing sybodies (Sb23) 2-up conformation | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; SYNTHETIC CONSTRUCT | synthetic construct | null | severe acute respiratory syndrome coronavirus2 | Hallberg, B.M., Das, H. | 2.94 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
5x08 | H | L | 0 | P | peptide | null | envelope glycoprotein gp160 | IMMUNE SYSTEM | 01/20/17 | Crystal structure of broadly neutralizing anti-HIV-1 antibody 4E10, mutant Npro, with peptide bound | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 (MAL ISOLATE) | homo sapiens | homo sapiens | human immunodeficiency virus type 1 (malisolate) | Caaveiro, J.M.M., Rujas, E., Nieva, J.L., Tsumoto, K. | 1.49 | X-RAY DIFFRACTION | 0.169 | 0.129 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
7s6j | H | L | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/Immune System | 09/14/21 | J08 fragment antigen binding in complex with SARS-CoV-2-6P-Mut2 S protein (conformation 1) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Ozorowski, G., Torres, J.L., Ward, A.B. | 3.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
7dk4 | c | d | 0 | B | protein | null | the light chain of 2h2 fab | VIRAL PROTEIN | 11/23/20 | S-2H2-F3a structure, two RBDs are up and one RBD is down, each RBD binds with a 2H2 Fab. | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS | mus musculus | mus musculus | severe acute respiratory syndrome coronavirus2 | Cong, Y., Wang, Y.F. | 3.8 | ELECTRON MICROSCOPY | null | null | false | false | IGHV2 | IGKV3 | Kappa | null | null | null | null | null |
6glw | C | D | 0 | B | protein | null | galectin-10 | SUGAR BINDING PROTEIN | 05/23/18 | Structure of galectin-10 in complex with the Fab fragment of a Charcot-Leyden crystal solubilizing antibody, 1D11 | HOMO SAPIENS; LAMA GLAMA | lama glama | lama glama | homo sapiens | Verstraete, K., Verschueren, K., Savvides, S.N. | 1.9 | X-RAY DIFFRACTION | 0.211 | 0.167 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
6bpa | B | C | 0 | A | protein | null | reticulocyte binding protein 2, putative | CELL INVASION | 11/22/17 | Plasmodium vivax reticulocyte binding protein 2b (PvRBP2b) bound to monoclonal antibody 3E9 | PLASMODIUM VIVAX (STRAIN SALVADOR I); MUS MUSCULUS | mus musculus | mus musculus | plasmodium vivax (strain salvador i) | Gruszczyk, J., Chan, L.J., Tham, W.H. | 2.53 | X-RAY DIFFRACTION | 0.225 | 0.194 | false | false | IGHV14 | IGKV17 | Kappa | null | null | null | null | null |
7k9h | I | M | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 09/29/20 | SARS-CoV-2 Spike in complex with neutralizing Fab 2B04 (one up, two down conformation) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS | mus musculus | mus musculus | severe acute respiratory syndrome coronavirus2 | Errico, J.M., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID) | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV2 | IGLV1 | Lambda | null | null | null | null | null |
6oe5 | B | C | 0 | A | protein | null | fusion glycoprotein f0,fibritin | Viral protein/immune system | 03/27/19 | Splayed open prefusion RSV F captured by CR9501 and motavizumab Fabs | HUMAN RESPIRATORY SYNCYTIAL VIRUS A (STRAIN A2); ENTEROBACTERIA PHAGE T4; MUS MUSCULUS; HOMO SAPIENS | mus musculus | mus musculus | human respiratory syncytial virus a (straina2), enterobacteria phage t4 | Gilman, M.S.A., McLellan, J.S. | 4.1 | X-RAY DIFFRACTION | 0.306 | 0.262 | false | true | IGHV2 | IGKV1 | Kappa | null | null | null | null | null |
7tow | A | B | 0 | D | peptide | null | spike protein s2 | IMMUNE SYSTEM/Viral Protein | 01/24/22 | Antibody DH1058 Fab fragment bound to SARS-CoV-2 fusion peptide | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Gobeil, S., Acharya, P. | 2.15 | X-RAY DIFFRACTION | 0.234 | 0.167 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
4osu | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 02/13/14 | Crystal structure of HCMV gB-neutralizing SM5-1 Fab fragment | HOMO SAPIENS | homo sapiens | homo sapiens | null | Diestel, U., Muller, Y.A. | 1.87 | X-RAY DIFFRACTION | 0.235 | 0.189 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
7p77 | W | null | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN | 07/19/21 | SARS-CoV-2 spike protein in complex with sybody#15 and sybody#68 in a 3up conformation | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; SYNTHETIC CONSTRUCT | synthetic construct | null | severe acute respiratory syndrome coronavirus2 | Walter, J.D., Hutter, C.A.J., Garaeva, A.A., Scherer, M., Zimmermann, I., Wyss, M., Rheinberger, J., Ruedin, Y., Earp, J.C., Egloff, P., Sorgenfrei, M., Huerlimann, L.M., Gonda, I., Meier, G., Remm, S., Thavarasah, S., Zimmer, G., Slotboom, D.J., Paulino, C., Plattet, P., Seeger, M.A. | 2.98 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
6x4t | D | F | 0 | A | protein | null | icos ligand | IMMUNE SYSTEM | 05/23/20 | Crystal structure of ICOS-L in complex with Prezalumab and VNAR domain | HOMO SAPIENS; ORECTOLOBUS MACULATUS | homo sapiens | homo sapiens | homo sapiens | Rujas, E., Sicard, T., Julien, J.P. | 3.15 | X-RAY DIFFRACTION | 0.256 | 0.201 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
4wy7 | H | L | 0 | P | peptide | null | envelope glycoprotein gp160 | IMMUNE SYSTEM | 11/16/14 | Crystal structure of recombinant 4E10 expressed in Escherichia coli with epitope bound | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 GROUP M SUBTYPE B | homo sapiens | homo sapiens | human immunodeficiency virus type 1 group msubtype b | Rujas, E., Morante, K., Tsumoto, K., Nieva, J.L., Caaveiro, J.M.M. | 2.1 | X-RAY DIFFRACTION | 0.207 | 0.162 | false | true | IGHV1 | IGKV3 | Kappa | 0 | -9.245869 | Unknown | null | TBD |
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