pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 354
values | r_factor stringclasses 342
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1vhp | A | null | 19 | null | null | null | null | IMMUNOGLOBULIN | 04/16/96 | VH-P8, NMR | HOMO SAPIENS | homo sapiens | null | null | Riechmann, L. | NOT | SOLUTION NMR | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null |
5h30 | G | H | 0 | A | protein | null | structural protein e | VIRUS/IMMUNE SYSTEM | 10/19/16 | Cryo-EM structure of zika virus complexed with Fab C10 at pH 6.5 | HOMO SAPIENS; ZIKA VIRUS | homo sapiens | homo sapiens | zika virus | Zhang, S., Kostyuchenko, V., Ng, T.-S., Lok, S.-M. | 4.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV2 | Lambda | null | null | null | null | null |
3ngb | E | F | 0 | D | protein | null | envelope glycoprotein gp160 | VIRAL PROTEIN/IMMUNE SYSTEM | 06/11/10 | Crystal structure of broadly and potently neutralizing antibody VRC01 in complex with HIV-1 gp120 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Zhou, T., Kwong, P.D. | 2.68 | X-RAY DIFFRACTION | 0.256 | 0.197 | false | true | IGHV1 | IGKV3 | Kappa | 0 | -10.88 | SPR | 20 | 20616231 |
1fj1 | D | C | 0 | E | protein | null | outer surface protein a | IMMUNE SYSTEM | 08/07/00 | LYME DISEASE ANTIGEN OSPA IN COMPLEX WITH NEUTRALIZING ANTIBODY FAB LA-2 | BORRELIA BURGDORFERI; MUS MUSCULUS | mus musculus | mus musculus | borrelia burgdorferi | Ding, W., Lawson, C.L. | 2.68 | X-RAY DIFFRACTION | 0.281 | 0.226 | false | false | IGHV9 | IGKV19 | Kappa | null | null | null | null | null |
5w08 | M | N | 0 | F | protein | null | hemagglutinin ha1 | VIRAL PROTEIN/IMMUNE SYSTEM | 05/30/17 | A/Texas/50/2012(H3N2) Influenza hemagglutinin in complex with K03.12 Fab | INFLUENZA A VIRUS (A/TEXAS/50/2012(H3N2)); HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus (a/texas/50/2012(h3n2)) | McCarthy, K.R., Harrison, S.C. | 2.6 | X-RAY DIFFRACTION | 0.262 | 0.240 | false | true | IGHV1 | IGLV2 | Lambda | 0 | -10.092596 | SPR | null | TBD |
6h15 | D | null | 0 | B | protein | null | low-density lipoprotein receptor-related protein 6 | SIGNALING PROTEIN | 07/11/18 | Structure of LRP6 P3E3P4E4 in complex with VHH L-P2-B10 | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | Gros, P., van Scherpenzeel, R.C. | 2.6 | X-RAY DIFFRACTION | 0.247 | 0.198 | false | true | IGHV1 | null | null | null | null | null | null | null |
3b9v | C | null | 0 | null | null | null | null | IMMUNE SYSTEM | 11/06/07 | Crystal Structure of an Autonomous VH Domain | HOMO SAPIENS | homo sapiens | null | null | Appleton, B.A., Barthelemy, P.A., Wiesmann, C. | 1.8 | X-RAY DIFFRACTION | 0.200 | 0.155 | false | true | IGHV3 | null | null | null | null | null | null | null |
4rgm | H | L | 0 | S | protein | null | enterotoxin type b | TOXIN/IMMUNE SYSTEM | 09/30/14 | Structure of Staphylococcal Enterotoxin B bound to the neutralizing antibody 20B1 | STAPHYLOCOCCUS AUREUS; MUS MUSCULUS | mus musculus | mus musculus | staphylococcus aureus | Franklin, M.C., Dutta, K., Varshney, A.K., Goger, M.J., Fries, B.C. | 2.689 | X-RAY DIFFRACTION | 0.277 | 0.225 | false | false | IGHV9 | IGKV9 | Kappa | 0 | -10.423049 | BLI | null | TBD |
4ag4 | H | L | 0 | A | protein | null | epithelial discoidin domain-containing receptor 1 | IMMUNE SYSTEM/TRANSFERASE | 01/24/12 | Crystal structure of a DDR1-Fab complex | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Carafoli, F., Mayer, M.C., Shiraishi, K., Pecheva, M.A., Chan, L.Y., Nan, R., Leitinger, B., Hohenester, E. | 2.8 | X-RAY DIFFRACTION | 0.2855 | 0.2156 | false | false | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
7m6g | R | S | 0 | B | protein | null | spike glycoprotein | VIRAL PROTEIN/ANTIVIRAL PROTEIN | 03/25/21 | Structure of the SARS-CoV-2 S 6P trimer in complex with the human neutralizing antibody Fab fragment, BG7-15 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Barnes, C.O., Bjorkman, P.J. | 3.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
3bz4 | B | A | 0 | B | carbohydrate | RAM | polysaccharide | IMMUNE SYSTEM | 01/17/08 | Crystal structure of Fab F22-4 in complex with a Shigella flexneri 2a O-Ag decasaccharide | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Saul, F.A., Vulliez-le-Normand, B., Bentley, G.A. | 1.8 | X-RAY DIFFRACTION | 0.230 | 0.176 | false | false | IGHV6 | IGKV2 | Kappa | null | null | null | null | null |
5ivz | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 03/21/16 | Cetuximab Fab in complex with Arg8Cir meditope variant | MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT | mus musculus, homo sapiens | mus musculus, homo sapiens | null | Bzymek, K.P., Williams, J.C. | 2.48 | X-RAY DIFFRACTION | 0.230 | 0.176 | false | true | IGHV2 | IGKV5 | Kappa | null | null | null | null | null |
5m30 | E | null | 0 | A | protein | null | type vi secretion protein | SECRETION SYSTEM | 10/13/16 | Structure of TssK from T6SS EAEC in complex with nanobody nb18 | VICUGNA PACOS; ESCHERICHIA COLI | vicugna pacos | null | escherichia coli | Nguyen, V.S., Cambillau, C., Spinelli, C., Desmyter, A., Legrand, P., Cascales, E. | 2.6 | X-RAY DIFFRACTION | 0.226 | 0.207 | false | true | IGHV1 | null | null | null | null | null | null | null |
5m2m | D | null | 0 | B | protein | null | tumor necrosis factor | CYTOKINE | 10/13/16 | Complex between human TNF alpha and Llama VHH3 | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | Cambillau, C., Spinelli, S., Desmyter, A., de Haard, H. | 2.3 | X-RAY DIFFRACTION | 0.248 | 0.211 | false | true | IGHV1 | null | null | 0 | -12.037965 | SPR | null | TBD |
2p46 | D | null | 0 | C | protein | null | ribonuclease pancreatic | HYDROLASE/IMMUNE SYSTEM | 03/11/07 | Complex of a camelid single-domain vhh antibody fragment with RNASE A at 2.5A resolution: se5b-ortho-2 crystal form with five se-met sites (L4M, M34, M51, F68M, M83) in vhh scaffold. | CAMELUS DROMEDARIUS; BOS TAURUS | camelus dromedarius | null | bos taurus | Tereshko, V., Uysal, S., Koide, A., Margalef, K., Koide, S., Kossiakoff, A.A. | 2.5 | X-RAY DIFFRACTION | 0.299 | 0.221 | false | true | IGHV1 | null | null | 0 | -9.61 | Other | 30 | 18445622 |
5voc | H | L | 0 | D | B | protein | protein | NA | NA | envelope glycoprotein ul130 | envelope glycoprotein l | Viral Protein/Immune System | 05/02/17 | Crystal structure of HCMV Pentamer in complex with neutralizing antibody 8I21 - Low resolution dataset for initial phasing by SAD | HUMAN CYTOMEGALOVIRUS; HOMO SAPIENS; HUMAN CYTOMEGALOVIRUS (STRAIN 5508); HUMAN CYTOMEGALOVIRUS (STRAIN AD169); HUMAN CYTOMEGALOVIRUS (STRAIN MERLIN) | homo sapiens | homo sapiens | human cytomegalovirus (strain merlin) | human cytomegalovirus (strain 5508) | Malito, E., Chandramouli, S. | 3.99 | X-RAY DIFFRACTION | 0.276 | 0.259 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
3liz | H | L | 0 | A | protein | null | aspartic protease bla g 2 | hydrolase/immune system | 01/25/10 | crystal structure of bla g 2 complexed with Fab 4C3 | BLATTELLA GERMANICA; MUS MUSCULUS | mus musculus | mus musculus | blattella germanica | Li, M., Gustchina, A., Glesner, J., Wunschmann, S., Pomes, A., Wlodawer, A. | 1.8 | X-RAY DIFFRACTION | 0.202 | 0.177 | false | false | IGHV5 | IGKV14 | Kappa | null | null | null | null | null |
6z2m | D | null | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 06/03/20 | H11-D4, SARS-CoV-2 RBD, CR3022 ternary complex | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS; LAMA GLAMA | lama glama | null | severe acute respiratory syndrome coronavirus2 | Naismith, J.H., Ren, J., Zhou, D., Zhao, Y., Stuart, D.I. | 2.71 | X-RAY DIFFRACTION | 0.241 | 0.198 | false | true | IGHV1 | null | null | null | null | null | null | null |
7tee | M | N | 0 | B | protein | null | glutamate receptor ionotropic, nmda 2b | SIGNALING PROTEIN/IMMUNE SYSTEM | 01/04/22 | Cryo-EM structure of GluN1b-2B NMDAR complexed to Fab2 Non-active2-like | RATTUS NORVEGICUS; MUS MUSCULUS | mus musculus | mus musculus | rattus norvegicus | Tajima, N., Furukawa, H. | 6.59 | ELECTRON MICROSCOPY | null | null | false | false | IGHV5 | IGKV19 | Kappa | null | null | null | null | null |
7ryu | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 08/26/21 | Anti-HIV neutralizing antibody Ab1303 Fab isolated from sequentially immunized mcaques | MACACA MULATTA | macaca mulatta | macaca mulatta | null | Yang, Z., Bjorkman, P.J. | 1.51 | X-RAY DIFFRACTION | 0.200 | 0.180 | false | true | IGHV4 | IGLV4 | Lambda | null | null | null | null | null |
5y0a | H | L | 0 | C | protein | null | protein e | VIRUS/IMMUNE SYSTEM | 07/15/17 | Cryo-EM structure of zika virus complexed with Fab of ZKA190 at pH 8.0 and 37 celsius degree | ZIKA VIRUS (STRAIN MR 766); HOMO SAPIENS | homo sapiens | homo sapiens | zika virus (strain mr 766) | Wang, J.Q., Lok, S.M. | 22 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
6fyu | F | null | 0 | E | D | protein | protein | NA | NA | hemagglutinin | hemagglutinin | VIRAL PROTEIN | 03/12/18 | Structure of H7(A/Shanghai/2/2013) Influenza Hemagglutinin in complex SD36 | INFLUENZA A VIRUS; LAMA GLAMA | lama glama | null | influenza a virus | influenza a virus | Laursen, N.S., Wilson, I.A. | 2.643 | X-RAY DIFFRACTION | 0.216 | 0.186 | false | true | IGHV1 | null | null | null | null | null | null | null |
6p4a | H | L | 0 | C | protein | null | lysozyme c | HYDROLASE/IMMUNE SYSTEM | 05/27/20 | HyHEL10 Fab complexed with hen egg lysozyme carrying two mutations (HEL2x-rigid): R21Q and R73E | MUS MUSCULUS; GALLUS GALLUS | mus musculus | mus musculus | gallus gallus | Langley, D.B., Christ, D. | 2.2 | X-RAY DIFFRACTION | 0.292 | 0.229 | false | true | IGHV3 | IGKV5 | Kappa | null | null | null | null | null |
5ysl | C | D | 0 | null | null | null | null | IMMUNE SYSTEM | 11/14/17 | Crystal structure of antibody 1H1 Fab | MUS MUSCULUS | mus musculus | mus musculus | null | Hu, X.L., Yang, F.L. | 2.5 | X-RAY DIFFRACTION | 0.273 | 0.212 | false | true | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
6xc3 | B | A | 0 | C | protein | null | spike protein s1 | IMMUNE SYSTEM/VIRAL PROTEIN | 06/08/20 | Crystal structure of SARS-CoV-2 receptor binding domain in complex with antibodies CC12.1 and CR3022 | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Yuan, M., Liu, H., Wu, N.C., Zhu, X., Wilson, I.A. | 2.698 | X-RAY DIFFRACTION | 0.225 | 0.177 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6wqo | B | C | 0 | A | protein | null | reticulocyte binding protein 2b | CELL INVASION | 04/29/20 | Plasmodium vivax reticulocyte binding protein 2b (PvRBP2b) bound to human monoclonal antibody 283284 | PLASMODIUM VIVAX (STRAIN SALVADOR I); HOMO SAPIENS | homo sapiens | homo sapiens | plasmodium vivax (strain salvador i) | Chan, L.J., Dietrich, M.H., Tham, W.H. | 3.15 | X-RAY DIFFRACTION | 0.305 | 0.254 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
7exd | E | e | 0 | A | B | G | protein | protein | protein | NA | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | guanine nucleotide-binding protein g(i)/g(s)/g(o) subunitgamma-2 | MEMBRANE PROTEIN | 05/27/21 | Lasmiditan-bound serotonin 1F (5-HT1F) receptor-Gi protein complex | HOMO SAPIENS; MUS MUSCULUS; ESCHERICHIA COLI | mus musculus | null | homo sapiens | homo sapiens | homo sapiens | Huang, S., Xu, P., Jiang, Y., Xu, H.E. | 3.4 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
4kk8 | C | D | 0 | A | protein | null | h(+)/cl(-) exchange transporter clca | TRANSPORT PROTEIN | 05/05/13 | Structure of the E148Q mutant of CLC-ec1 deltaNC construct in 100mM fluoride | ESCHERICHIA COLI; MUS MUSCULUS | mus musculus | mus musculus | escherichia coli | Lim, H.-H., Miller, C. | 2.86 | X-RAY DIFFRACTION | 0.256 | 0.210 | false | true | IGHV4 | IGKV4 | Kappa | null | null | null | null | null |
7a5v | O | null | 0 | A | protein | null | gamma-aminobutyric acid receptor subunit beta-3,gamma-aminobutyric acid receptor subunit beta-3 | MEMBRANE PROTEIN | 08/22/20 | CryoEM structure of a human gamma-aminobutyric acid receptor, the GABA(A)R-beta3 homopentamer, in complex with histamine and megabody Mb25 in lipid nanodisc | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | Nakane, T., Kotecha, A., Sente, A., Yamashita, K., McMullan, G., Masiulis, S., Brown, P.M.G.E., Grigoras, I.T., Malinauskaite, L., Malinauskas, T., Miehling, J., Yu, L., Karia, D., Pechnikova, E.V., de Jong, E., Keizer, J., Bischoff, M., McCormack, J., Tiemeijer, P., Hardwick, S.W., Chirgadze, D.Y., Murshudov, G., Aric... | 1.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
1sm3 | H | L | 0 | P | peptide | null | peptide epitope | COMPLEX (ANTIBODY/PEPTIDE EPITOPE) | 12/23/97 | CRYSTAL STRUCTURE OF THE TUMOR SPECIFIC ANTIBODY SM3 COMPLEX WITH ITS PEPTIDE EPITOPE | MUS MUSCULUS | mus musculus | mus musculus | null | Dokurno, P., Bates, P.A., Band, H.A., Stewart, L.M.D., Lally, J.M., Burchell, J.M., Taylor-Papadimitriou, J., Sternberg, M.J.E., Snary, D., Freemont, P.S. | 1.95 | X-RAY DIFFRACTION | 0.283 | 0.213 | false | false | IGHV6 | IGLV1 | Lambda | 0.000024 | -6.30252 | Unknown | null | TBD |
6n6b | K | L | 0 | A | protein | null | neuraminidase | VIRAL PROTEIN/Immune System | 11/26/18 | The complex crystal structure of neuraminidase from A/Minnesota/11/2010 with B10 antibody. | INFLUENZA A VIRUS (A/MINNESOTA/11/2010(H3N2)); MUS MUSCULUS | mus musculus | mus musculus | influenza a virus (a/minnesota/11/2010(h3n2)) | Yang, H., Stevens, J. | 2.3 | X-RAY DIFFRACTION | 0.245 | 0.220 | false | true | IGHV3 | IGKV6 | Kappa | null | null | null | null | null |
7l7e | A | B | 0 | G | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 12/28/20 | Crystal structure of SARS-CoV-2 spike RBD in complex with human monoclonal antibodies AZD8895 and AZD1061 | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Dong, J., Crowe, J.E. | 3.0 | X-RAY DIFFRACTION | 0.273 | 0.215 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6o39 | B | A | 0 | C | protein | null | frizzled-5 | SIGNALING PROTEIN | 02/26/19 | Crystal structure of Frizzled 5 CRD in complex with F2.I Fab | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Raman, S., Beilschmidt, M., Fransson, J., Julien, J.P. | 1.8 | X-RAY DIFFRACTION | 0.234 | 0.196 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6vkn | H | L | 0 | A | E | protein | protein | NA | NA | envelope glycoprotein gp160 | bg505 sosipv5.2 gp41 | VIRAL PROTEIN/Immune System | 01/21/20 | BG505 SOSIP.v5.2.N241.N289 in complex with rhesus macaque Fab RM19R | HUMAN IMMUNODEFICIENCY VIRUS 1; MACACA MULATTA | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Cottrell, C.A., Ward, A.B. | 3.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV3 | Kappa | null | null | null | null | null |
7zfb | A | B | 0 | E | protein | null | spike protein s1 | VIRAL PROTEIN | 04/01/22 | SARS-CoV-2 Omicron RBD in complex with nanobody C1, Omi-18 and Omi-31 Fabs | LAMA GLAMA; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, D., Huo, J., Ren, J., Stuart, D.I. | 3.08 | X-RAY DIFFRACTION | 0.308 | 0.261 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
6vyv | J | N | 0 | G | protein | null | e2 glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 02/27/20 | Human mAbs broadly protect against infection of arthritiogenic alphaviruses by recognizing conserved elements of the MXR8 receptor binding domain | ROSS RIVER VIRUS (STRAIN T48); HOMO SAPIENS | homo sapiens | homo sapiens | ross river virus (strain t48) | Miller, A.S., Kuhn, R.J. | 6.33 | ELECTRON MICROSCOPY | null | null | false | true | IGHV9 | IGLV1 | Lambda | null | null | null | null | null |
7k76 | A | B | 0 | P | peptide | null | pfcsp n-terminal peptide p17 | IMMUNE SYSTEM | 09/22/20 | Crystal structure of MAD2-6 IgG Fab in complex with PfCSP N-terminal peptide. | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | plasmodium falciparum | Pholcharee, T., Wilson, I.A. | 2.14 | X-RAY DIFFRACTION | 0.218 | 0.184 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
1yej | H | L | 0 | L | Hapten | PNF | 6-{4-[HYDROXY-(4-NITRO-PHENOXY)-PHOSPHORYL]-BUTYRYLAMINO}-HEXANOIC ACID | IMMUNE SYSTEM | 08/13/98 | CATALYTIC ANTIBODY COMPLEX | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Gigant, B., Knossow, M. | 1.85 | X-RAY DIFFRACTION | 0.246 | 0.212 | false | false | IGHV1 | IGKV1 | Kappa | 0 | -10.171711 | Unknown | null | TBD |
7li8 | B | C | 0 | A | protein | null | sodium-dependent serotonin transporter | MEMBRANE PROTEIN | 01/26/21 | apo serotonin transporter reconstituted in lipid nanodisc in presence of NaCl in inward open conformation | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Yang, D., Gouaux, E. | 3.9 | ELECTRON MICROSCOPY | null | null | false | false | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
7m1h | B | null | 0 | A | protein | null | botulinum neurotoxin a light chain | ANTITOXIN | 03/13/21 | Crystal structure of LC/A-JPU-C10-JPU-D12-JPU-B8-JPU-G3-ciA-F12-ciA-D12 | CLOSTRIDIUM BOTULINUM; VICUGNA PACOS | vicugna pacos | null | clostridium botulinum | Lam, K., Jin, R. | 2.78 | X-RAY DIFFRACTION | 0.249 | 0.217 | false | true | IGHV1 | null | null | null | null | null | null | null |
6yxl | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 05/03/20 | Crystal structure of ACPA F3 | HOMO SAPIENS | null | null | null | Ge, C., Holmdahl, R. | 2.1 | X-RAY DIFFRACTION | 0.231 | 0.199 | false | false | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
4tnv | Y | g | 0 | T | protein | null | avermectin-sensitive glutamate-gated chloride channel gluclalpha | Transport Protein/immune System | 06/05/14 | C. elegans glutamate-gated chloride channel (GluCl) in complex with Fab in a non-conducting conformation | CAENORHABDITIS ELEGANS; MUS MUSCULUS | mus musculus | mus musculus | caenorhabditis elegans | Althoff, T., Hibbs, R.E., Banerjee, S., Gouaux, E. | 3.6 | X-RAY DIFFRACTION | 0.283 | 0.261 | false | false | unknown | unknown | unknown | null | null | null | null | null |
5c0n | H | L | 0 | A | protein | null | fatty acid-binding protein, adipocyte | LIPID TRANSPORT | 06/12/15 | Development of a monoclonal antibody targeting secreted aP2 to treat diabetes and fatty liver disease | ORYCTOLAGUS CUNICULUS; MUS MUSCULUS | oryctolagus cuniculus | oryctolagus cuniculus | mus musculus | Doyle, C. | 3.0 | X-RAY DIFFRACTION | 0.265 | 0.186 | false | true | IGHV1 | IGKV1 | Kappa | 0.000004 | -7.345158 | SPR | null | TBD |
6xtg | H | L | 0 | A | carbohydrate | NAG | N-ACETYL-D-GLUCOSAMINE | ANTITUMOR PROTEIN | 01/16/20 | Ab 1116NS19.9 bound to CA19-9 | MUS MUSCULUS | mus musculus | mus musculus | null | Diskin, R., Borenstein-Katz, A. | 1.55 | X-RAY DIFFRACTION | 0.201 | 0.174 | false | true | IGHV6 | IGKV14 | Kappa | null | null | null | null | null |
3f7y | A | B | 0 | C | protein | null | voltage-gated potassium channel | membrane protein/metal transport | 11/10/08 | KcsA Potassium channel in the partially open state with 17 A opening at T112 | STREPTOMYCES LIVIDANS; MUS MUSCULUS | mus musculus | mus musculus | streptomyces lividans | Cuello, L.G., Jogini, V., Cortes, D.M., Perozo, E. | 3.4 | X-RAY DIFFRACTION | 0.274 | 0.263 | false | false | IGHV1 | IGKV5 | Kappa | null | null | null | null | null |
4yx2 | H | L | 0 | A | protein | null | major prion protein | IMMUNE SYSTEM | 03/22/15 | Crystal structure of Bovine prion protein complexed with POM1 FAB | MUS MUSCULUS; BOS TAURUS | mus musculus | mus musculus | bos taurus | Baral, P.K., Swayampakula, M., James, M.N.G. | 2.194 | X-RAY DIFFRACTION | 0.263 | 0.216 | false | true | IGHV1 | IGKV5 | Kappa | null | null | null | null | null |
1ynt | D | C | 0 | G | protein | null | major surface antigen p30 | IMMUNE SYSTEM | 01/25/05 | Structure of the immunodominant epitope displayed by the surface antigen 1 (SAG1) of Toxoplasma gondii complexed to a monoclonal antibody | FINEGOLDIA MAGNA; TOXOPLASMA GONDII; MUS MUSCULUS | mus musculus | mus musculus | toxoplasma gondii | Graille, M., Stura, E.A., Bossus, M., Muller, B.H., Letourneur, O., Battail-Poirot, N, Sibai, G., Rolland, D., Le Du, M.H., Ducancel, F. | 3.1 | X-RAY DIFFRACTION | 0.283 | 0.241 | false | false | IGHV1 | IGKV10 | Kappa | null | null | null | null | null |
3idg | B | A | 0 | C | peptide | null | gp41 mper peptide | IMMUNE SYSTEM | 07/21/09 | Crystal structure of the HIV-1 Cross Neutralizing Monoclonal Antibody 2F5 in complex with gp41 Peptide ALDKWD | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | null | Julien, J.P., Bryson, S., Pai, E.F. | 1.86 | X-RAY DIFFRACTION | 0.227 | 0.224 | false | false | IGHV2 | IGKV1 | Kappa | null | null | null | null | null |
7dcx | A | F | 0 | C | protein | null | sars-cov2 s protein | VIRAL PROTEIN | 10/27/20 | S-3C1-F3a structure, two RBDs are up and one RBD is down, each RBD binds with a 3C1 fab. | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS | mus musculus | mus musculus | severe acute respiratory syndrome coronavirus2 | Cong, Y., Liu, C.X. | 5.9 | ELECTRON MICROSCOPY | null | null | false | false | IGHV3 | IGKV6 | Kappa | null | null | null | null | null |
4hie | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 10/11/12 | Anti-Streptococcus pneumoniae 23F Fab 023.102 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Bryson, S., Risnes, L, Damgupta, S, Thomson, C.A., Schrader, J.W., Pai, E.F. | 1.9 | X-RAY DIFFRACTION | 0.243 | 0.218 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
3bd3 | null | B | 0 | null | null | null | null | IMMUNE SYSTEM | 11/14/07 | Crystal structure of single domain VL of an anti-DNA binding antibody 3D8 scFv and its active site revealed by complex structures of a small molecule and metals | MUS MUSCULUS | null | mus musculus | null | Park, S.K., Kim, J.S. | 1.6 | X-RAY DIFFRACTION | 0.270 | 0.229 | true | true | null | IGKV8 | Kappa | null | null | null | null | null |
5tih | H | L | 0 | A | protein | null | cysteine-rich protective antigen | IMMUNE SYSTEM | 10/03/16 | Structural basis for inhibition of erythrocyte invasion by antibodies to Plasmodium falciparum protein CyRPA | PLASMODIUM FALCIPARUM; MUS MUSCULUS | mus musculus | mus musculus | plasmodium falciparum | Chen, L., Xu, Y., Wang, W., Thompson, J.K., Goddard-Borger, E., Lawrence, M.C., Cowman, A.F. | 2.44 | X-RAY DIFFRACTION | 0.212 | 0.189 | false | true | IGHV1 | IGKV9 | Kappa | null | null | null | null | null |
7p5y | L | null | 0 | F | protein | null | volume-regulated anion channel subunit lrrc8a | MEMBRANE PROTEIN | 07/15/21 | Structure of homomeric LRRC8A Volume-Regulated Anion Channel in complex with synthetic nanobody Sb3 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | synthetic construct | null | mus musculus | Deneka, D., Rutz, S., Sawicka, M. | 3.29 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
7wwm | J | N | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN | 02/13/22 | S protein of Delta variant in complex with ZWC6 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Guo, Y.Y., Zhang, Y.Y., Zhou, Q. | 2.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
7fjo | F | G | 0 | C | protein | null | spike glycoprotein | IMMUNE SYSTEM/VIRAL PROTEIN | 08/04/21 | Cryo-EM structure of South African (B.1.351) SARS-CoV-2 spike glycoprotein in complex with three T6 Fab | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Wang, X., Zhang, L., Zhang, S., Liang, Q. | 3.34 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
4ocx | H | L | 0 | L | Hapten | MT1 | N-(4-{[(2,4-DIAMINOPTERIDIN-1-IUM-6-YL)METHYL](METHYL)AMINO}BENZOYL)-L-GLUTAMIC ACID | IMMUNE SYSTEM | 01/09/14 | Fab complex with methotrexate | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Longenecker, K.L., Judge, R.A., Gayda, S., Manoj, S., Saldana, S., Ruan, Q., Swift, K., Tetin, S. | 2.39 | X-RAY DIFFRACTION | 0.216 | 0.187 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
4gms | H | L | 0 | A | protein | null | hemagglutinin ha1 chain | VIRAL PROTEIN/IMMUNE SYSTEM | 08/16/12 | Crystal structure of heterosubtypic Fab S139/1 in complex with influenza A H3 hemagglutinin | MUS MUSCULUS; INFLUENZA A VIRUS | mus musculus | mus musculus | influenza a virus | Lee, P.S., Ekiert, D.C., Wilson, I.A. | 2.95 | X-RAY DIFFRACTION | 0.233 | 0.207 | false | true | IGHV1 | IGKV6 | Kappa | 0 | -10.503274 | BLI | null | TBD |
6v8z | I | L | 0 | G | protein | null | envelope glycoprotein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 12/12/19 | VRC03 and 10-1074 Bound BG505 F14 HIV-1 SOSIP Envelope Trimer Structure | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Henderson, R., Acharya, P. | 2.9 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV3 | Kappa | null | null | null | null | null |
7kn3 | M | N | 0 | B | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 11/04/20 | Crystal structure of SARS-CoV-2 spike protein receptor-binding domain complexed with a pre-pandemic antibody S-B8 Fab | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Liu, H., Zhu, X., Wilson, I.A. | 2.251 | X-RAY DIFFRACTION | 0.222 | 0.186 | false | true | IGHV3 | IGKV4 | Kappa | null | null | null | null | null |
7tus | C | D | 0 | null | null | null | null | IMMUNE SYSTEM | 02/03/22 | Sculpting a uniquely reactive cysteine residue for site-specific antibody conjugation | HOMO SAPIENS | homo sapiens | homo sapiens | null | Park, H., Rader, C. | 2.4 | X-RAY DIFFRACTION | 0.257 | 0.218 | false | true | IGHV6 | IGKV1 | Kappa | null | null | null | null | null |
4b5e | B | null | 0 | null | null | null | null | IMMUNE SYSTEM | 08/03/12 | Crystal Structure of an amyloid-beta binding single chain antibody PS2-8 | LAMA GLAMA | lama glama | null | null | Beringer, D.X., Dorresteijn, B., Rutten, L., Wienk, H., el Khattabi, M., Kroon-Batenburg, L.M.J., Verrips, C.T. | 1.936 | X-RAY DIFFRACTION | 0.2356 | 0.1812 | false | true | IGHV1 | null | null | null | null | null | null | null |
6ot1 | M | N | 0 | D | protein | null | envelope glycoprotein gp41 | IMMUNE SYSTEM | 05/02/19 | Cryo-EM structure of vaccine-elicited antibody 0PV-b.01 in complex with HIV-1 Env BG505 DS-SOSIP and antibodies VRC03 and PGT122 | HUMAN IMMUNODEFICIENCY VIRUS 1; MACACA MULATTA; HOMO SAPIENS | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | Gorman, J., Kwong, P.D. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV2 | Kappa | null | null | null | null | null |
7ew5 | H | I | 0 | D | protein | null | major capsid protein l1 | VIRAL PROTEIN | 05/24/21 | immune complex of HPV6 L1 pentamer and neutralizing antibody 13H5 | HUMAN PAPILLOMAVIRUS TYPE 6; MUS MUSCULUS | mus musculus | mus musculus | human papillomavirus type 6 | Wang, Z.P., Wang, D.N., Gu, Y., Li, S.W. | 3.606 | X-RAY DIFFRACTION | 0.293 | 0.252 | false | false | IGHV14 | IGKV6 | Kappa | null | null | null | null | null |
5w08 | Q | R | 0 | D | protein | null | hemagglutinin ha1 | VIRAL PROTEIN/IMMUNE SYSTEM | 05/30/17 | A/Texas/50/2012(H3N2) Influenza hemagglutinin in complex with K03.12 Fab | INFLUENZA A VIRUS (A/TEXAS/50/2012(H3N2)); HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus (a/texas/50/2012(h3n2)) | McCarthy, K.R., Harrison, S.C. | 2.6 | X-RAY DIFFRACTION | 0.262 | 0.240 | false | true | IGHV1 | IGLV2 | Lambda | 0 | -10.092596 | SPR | null | TBD |
5zia | H | I | 0 | J | peptide | null | phosphorylated tau peptide | IMMUNE SYSTEM | 03/14/18 | Crystal structure of human anti-tau antibody CBTAU-24.1 in complex with its phosphorylated tau peptide | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | homo sapiens | Zhang, H., Wilson, I.A. | 2.603 | X-RAY DIFFRACTION | 0.249 | 0.200 | false | true | IGHV1 | IGKV4 | Kappa | 0 | -8.898799 | Unknown | null | TBD |
6rcv | E | D | 0 | A | protein | null | reticulocyte binding protein homologue 5 | CELL ADHESION | 04/11/19 | PfRH5 bound to monoclonal antibodies R5.011 and R5.016 | PLASMODIUM FALCIPARUM; HOMO SAPIENS | homo sapiens | homo sapiens | plasmodium falciparum | Alanine, D.W.G., Draper, S.J., Higgins, M.K. | 3.582 | X-RAY DIFFRACTION | 0.305 | 0.280 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
2vdn | H | L | 0 | A | protein | null | integrin alpha-iib | CELL ADHESION/IMMUNE SYSTEM | 10/10/07 | Re-refinement of Integrin AlphaIIbBeta3 Headpiece Bound to Antagonist Eptifibatide | HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | Springer, T., Zhu, J., Xiao, T. | 2.9 | X-RAY DIFFRACTION | 0.213 | 0.163 | false | false | IGHV14 | IGKV14 | Kappa | null | null | null | null | null |
3jab | Q | R | 0 | O | protein | null | phosphodiesterase 5/6 chimera catalytic domain | HYDROLASE/IMMUNE SYSTEM | 05/26/15 | Domain organization and conformational plasticity of the G protein effector, PDE6 | BOS TAURUS; MUS MUSCULUS | mus musculus | mus musculus | bos taurus | Zhang, Z., He, F., Constantine, R., Baker, M.L., Baehr, W., Schmid, M.F., Wensel, T.G., Agosto, M.A. | 11 | ELECTRON MICROSCOPY | null | null | false | false | IGHV14 | IGKV6 | Kappa | null | null | null | null | null |
6v80 | E | null | 0 | A | C | protein | protein | NA | NA | antigen-presenting glycoprotein cd1d | t cell receptor alpha variable 10, nkt tcr alpha chainfusion | IMMUNE SYSTEM | 12/10/19 | Crystal structure of human CD1d presenting alpha-Galactosylceramide in complex with NKT12 TCR and VHH nanobody 1D12 | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | homo sapiens | Shahine, A., Rossjohn, J. | 3.53 | X-RAY DIFFRACTION | 0.254 | 0.195 | false | true | IGHV1 | null | null | null | null | null | null | null |
4xcy | G | I | 0 | null | null | null | null | IMMUNE SYSTEM | 12/18/14 | Crystal structure of human 4E10 Fab in complex with phosphatidylglycerol (06:0 PG) | HOMO SAPIENS | homo sapiens | homo sapiens | null | Irimia, A., Stanfield, R.L., Wilson, I.A. | 3.96 | X-RAY DIFFRACTION | 0.291 | 0.244 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
7wpf | X | Y | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 01/23/22 | SARS-CoV-2 Omicron Variant S Trimer complexed with three JMB2002 Fab | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS; LAMA GLAMA | mus musculus | mus musculus | severe acute respiratory syndrome coronavirus2 | Yin, W., Xu, Y., Xu, P., Cao, X., Wu, C., Gu, C., He, X., Wang, X., Huang, S., Yuan, Q., Wu, K., Hu, W., Huang, Z., Liu, J., Wang, Z., Jia, F., Xia, K., Liu, P., Wang, X., Song, B., Zheng, J., Jiang, H., Cheng, X., Jiang, Y., Deng, S.J., Xu, H.E. | 2.92 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7scg | E | e | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 09/28/21 | FH210 bound Mu Opioid Receptor-Gi Protein Complex | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | homo sapiens | Wang, H., Kobilka, B. | 3 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
2gsi | D | C | 0 | X | peptide | null | thermonuclease | IMMUNE SYSTEM | 04/26/06 | Crystal Structure of a Murine Fab in Complex with an 11 Residue Peptide Derived from Staphylococcal Nuclease | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | null | Armstrong, A.A., Amzel, L.M. | 2.81 | X-RAY DIFFRACTION | 0.293 | 0.221 | false | false | IGHV14 | IGKV3 | Kappa | null | null | null | null | null |
5vvf | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 05/19/17 | Crystal Structure of 354BG1 Fab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Scharf, L., Gristick, H.B., Bjorkman, P.J. | 2.0 | X-RAY DIFFRACTION | 0.247 | 0.210 | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null |
1bre | null | F | 0 | null | null | null | null | IMMUNOGLOBULIN | 07/19/95 | IMMUNOGLOBULIN LIGHT CHAIN PROTEIN | HOMO SAPIENS | null | homo sapiens | null | Schormann, N., Benson, M.D. | 2.0 | X-RAY DIFFRACTION | 0.337 | 0.218 | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
1gaf | H | L | 0 | H | Hapten | NPE | 5-(PARA-NITROPHENYL PHOSPHONATE)-PENTANOIC ACID | CATALYTIC ANTIBODY | 02/06/96 | 48G7 HYBRIDOMA LINE FAB COMPLEXED WITH HAPTEN 5-(PARA-NITROPHENYL PHOSPHONATE)-PENTANOIC ACID | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Wedemayer, G.J., Patten, P.A., Stevens, R.C., Schultz, P.G. | 1.95 | X-RAY DIFFRACTION | 0.307 | 0.244 | false | true | IGHV14 | IGKV9 | Kappa | 0 | -10.913953 | Unknown | null | TBD |
5vk2 | H | L | 0 | a | A | protein | protein | NA | NA | unknown | pre-glycoprotein polyprotein gp complex | VIRAL PROTEIN/Immune system | 04/20/17 | Structural basis for antibody-mediated neutralization of Lassa virus | LASSA VIRUS; LASSA VIRUS (STRAIN MOUSE/SIERRA LEONE/JOSIAH/1976); HOMO SAPIENS | homo sapiens | homo sapiens | lassa virus (strain mouse/sierraleone/josiah/1976) | lassa virus | Hastie, K.M., Zandonatti, M.A., Kleinfelter, L.M., Rowland, M.L., Rowland, M.M., Chandra, K., Branco, L.M., Robinson, J.E., Garry, R.F., Saphire, E.O. | 3.201 | X-RAY DIFFRACTION | 0.231 | 0.189 | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
7o9w | C | B | 0 | A | protein | null | multidrug resistance protein 1 | TRANSPORT PROTEIN | 04/17/21 | Encequidar-bound human P-glycoprotein in complex with UIC2-Fab | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Nosol, K., Locher, K.P. | 3.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
5myx | D | C | 0 | F | peptide | null | pyroglutamate-abeta pe3-18 | IMMUNE SYSTEM | 01/30/17 | Structure of Pyroglutamate-Abeta-specific Fab c#24 in complex with human Abeta-pE3-18 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | Parthier, C., Piechotta, A., Stubbs, M.T. | 1.492 | X-RAY DIFFRACTION | 0.213 | 0.181 | false | true | IGHV1 | IGKV1 | Kappa | 0 | -11.138111 | Unknown | null | TBD |
2dqg | H | L | 0 | Y | protein | null | lysozyme c | IMMUNE SYSTEM/HYDROLASE | 05/25/06 | Crystal structure of hyhel-10 FV mutant (Hy53f) complexed with hen egg lysozyme | MUS MUSCULUS; GALLUS GALLUS | mus musculus | mus musculus | gallus gallus | Shiroishi, M., Kondo, H., Tsumoto, K., Kumagai, I. | 2.3 | X-RAY DIFFRACTION | 0.254 | 0.203 | false | true | IGHV3 | IGKV5 | Kappa | null | null | null | null | null |
6quz | E | null | 0 | B | A | protein | protein | NA | NA | uncharacterized abc transporter atp-binding proteintm_0288 | abc transporter, atp-binding protein | MEMBRANE PROTEIN | 03/01/19 | Structure of ATPgS-bound outward-facing TM287/288 in complex with sybody Sb_TM35 | THERMOTOGA MARITIMA (STRAIN ATCC 43589 / MSB8 / DSM 3109 / JCM 10099); SYNTHETIC CONSTRUCT | synthetic construct | null | thermotoga maritima (strain atcc 43589 / msb8 /dsm 3109 / jcm 10099) | thermotoga maritima (strain atcc 43589 / msb8 /dsm 3109 / jcm 10099) | Hutter, C.A.J., Huerlimann, L.M., Zimmermann, I., Egloff, P., Seeger, M.A. | 3.21 | X-RAY DIFFRACTION | 0.263 | 0.243 | false | true | IGHV1 | null | null | null | null | null | null | null |
4lgs | B | null | 0 | A | protein | null | ricin | HYDROLASE/IMMUNE SYSTEM | 06/28/13 | Ricin A chain bound to camelid nanobody (VHH4) | RICINUS COMMUNIS; VICUGNA PACOS | vicugna pacos | null | ricinus communis | Rudolph, M.J., Cheung, J., Franklin, M., Burshteyn, F., Cassidy, M., Gary, E., Mantis, N. | 2.7 | X-RAY DIFFRACTION | 0.248 | 0.200 | false | true | IGHV1 | null | null | null | null | null | null | null |
6oej | B | C | 0 | A | protein | null | clade a/e 93th057 hiv-1 gp120 core | IMMUNE SYSTEM | 03/27/19 | CRYSTAL STRUCTURE OF THE NON-NEUTRALIZING AND ADCC-POTENT ANTIBODY C11 IN COMPLEX WITH HIV-1 CLADE A/E GP120 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Tolbert, W.D., Pazgier, M. | 3.45 | X-RAY DIFFRACTION | 0.284 | 0.231 | false | true | IGHV3 | IGKV2 | Kappa | null | null | null | null | null |
5jof | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 05/02/16 | Crystal structure of VRC03 gHVgLV antigen-binding fragment. | HOMO SAPIENS | homo sapiens | homo sapiens | null | Joyce, M.G., Mascola, J.R., Kwong, P.D. | 3.208 | X-RAY DIFFRACTION | 0.242 | 0.195 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
1pg7 | X | W | 0 | null | null | null | null | IMMUNE SYSTEM | 05/27/03 | Murine 6A6 Fab in complex with humanized anti-Tissue Factor D3H44 Fab | SYNTHETIC CONSTRUCT; MUS MUSCULUS | mus musculus | mus musculus | null | Eigenbrot, C., Meng, Y.G., Krishnamurthy, R., Lipari, M.T., Presta, L., Devaux, B., Wong, T., Moran, P., Bullens, S., Kirchhofer, D. | 2.5 | X-RAY DIFFRACTION | 0.265 | 0.217 | false | false | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
1fsk | F | E | 0 | D | protein | null | major pollen allergen bet v 1-a | IMMUNE SYSTEM | 09/11/00 | COMPLEX FORMATION BETWEEN A FAB FRAGMENT OF A MONOCLONAL IGG ANTIBODY AND THE MAJOR ALLERGEN FROM BIRCH POLLEN BET V 1 | BETULA PENDULA; MUS MUSCULUS | mus musculus | mus musculus | betula pendula | Mirza, O., Henriksen, A., Ipsen, H., Larsen, J., Wissenbach, M., Spangfort, M., Gajhede, M. | 2.9 | X-RAY DIFFRACTION | 0.285 | 0.253 | false | true | IGHV1 | IGKV6 | Kappa | 0 | -13.12374 | Unknown | null | TBD |
4mhh | J | K | 0 | A | protein | null | hemagglutinin ha1 chain | VIRAL PROTEIN/IMMUNE SYSTEM | 08/29/13 | Crystal structure of Fab H5M9 in complex with influenza virus hemagglutinin from A/Viet Nam/1203/2004 (H5N1) | INFLUENZA A VIRUS; MUS MUSCULUS | mus musculus | mus musculus | influenza a virus | Zhu, X., Wilson, I.A. | 3.564 | X-RAY DIFFRACTION | 0.238 | 0.201 | false | true | IGHV1 | IGKV3 | Kappa | 0 | -12.340621 | BLI | null | TBD |
6m3z | H | L | 0 | A | protein | null | sodium-dependent dopamine transporter | MEMBRANE PROTEIN | 03/04/20 | X-ray structure of a Drosophila dopamine transporter with NET-like mutations (D121G/S426M/F471L) in milnacipran bound form | DROSOPHILA MELANOGASTER; MUS MUSCULUS | mus musculus | mus musculus | drosophila melanogaster | Shabareesh, P., Mallela, A.K., Joseph, D., Penmatsa, A. | 3.11 | X-RAY DIFFRACTION | 0.264 | 0.222 | false | true | IGHV5 | IGKV4 | Kappa | null | null | null | null | null |
2kqn | null | B | 16 | null | null | null | null | IMMUNE SYSTEM | 11/11/09 | Solution structure of the AL-09 H87Y immunoglobulin light chain variable domain | HOMO SAPIENS | null | homo sapiens | null | Volkman, B.F., Peterson, F.C., Ramirez-Alvarado, M., Baden, E.M. | NOT | SOLUTION NMR | null | null | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
6hhu | H | null | 0 | A | protein | null | s-layer protein sap | STRUCTURAL PROTEIN | 08/29/18 | Structure of the Bacillus anthracis Sap S-layer assembly domain | BACILLUS ANTHRACIS; LAMA GLAMA | lama glama | null | bacillus anthracis | Remaut, H., Fioravanti, A. | 2.7 | X-RAY DIFFRACTION | 0.250 | 0.186 | false | true | IGHV3 | null | null | null | null | null | null | null |
7tcc | O | P | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN/Immune System | 12/23/21 | Cryo-EM structure of SARS-CoV-2 Omicron spike in complex with antibodies A19-46.1 and B1-182.1 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, T., Kwong, P.D. | 3.86 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6wix | H | L | 0 | G | protein | null | envelope glycoprotein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 04/10/20 | Crystal Structure of HIV-1 MI369 RnS-DS.SOSIP Prefusion Env Trimer in Complex with Human Antibodies 3H109L and 35O22 at 3.5 Angstrom | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Lai, Y.-T., Olia, A., Kwong, P.D. | 2.67 | X-RAY DIFFRACTION | 0.270 | 0.225 | false | true | IGHV4 | unknown | unknown | null | null | null | null | null |
5ojm | N | null | 0 | D | protein | null | human gabaa receptor chimera beta3-alpha5,gamma-aminobutyric acid receptor subunit beta-3,gamma-aminobutyric acid receptor subunit alpha-5 | MEMBRANE PROTEIN | 07/21/17 | Structure of a chimaeric beta3-alpha5 GABAA receptor in complex with nanobody Nb25 | SYNTHETIC CONSTRUCT; HOMO SAPIENS; LAMA GLAMA | lama glama | null | synthetic construct, homo sapiens | Miller, P.S., Scott, S., Masiulis, S., De Colibus, L., Pardon, E., Steyaert, J., Aricescu, A.R. | 3.3 | X-RAY DIFFRACTION | 0.250 | 0.234 | false | true | IGHV1 | null | null | null | null | null | null | null |
6u3z | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 08/22/19 | Structure of VD20_5A4 Fab | MACACA MULATTA | macaca mulatta | macaca mulatta | null | Dionne, G., Shapiro, L. | 1.99002 | X-RAY DIFFRACTION | 0.236 | 0.199 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
7zmo | C | null | 0 | B | protein | null | atp-dependent dna helicase q5 | HYDROLASE | 04/19/22 | Crystal structure of human RECQL5 helicase APO form in complex with engineered nanobody (Gluebody) G3-052 | Homo sapiens; Lama glama | lama glama | null | homo sapiens | Ye, M., Makola, M., Newman, J.A., Fairhead, M., MacLean, E., Krojer, T., Aitkenhead, H., Bountra, C., Gileadi, O., von Delft, F. | 3.75 | X-RAY DIFFRACTION | 0.306 | 0.283 | false | true | IGHV1 | null | null | null | null | null | null | null |
7cz0 | E | null | 0 | A | protein | null | thermostable green fluorescent protein (tgp) | FLUORESCENT PROTEIN | 09/06/20 | Crystal structure of a thermostable green fluorescent protein (TGP) with a synthetic nanobody (Sb92) | GALAXEA FASCICULARIS; SYNTHETIC CONSTRUCT | synthetic construct | null | galaxea fascicularis | Cai, H., Yao, H., Li, T., Hutter, C., Tang, Y., Li, Y., Seeger, M., Li, D. | 2.77 | X-RAY DIFFRACTION | 0.241 | 0.202 | false | true | IGHV1 | null | null | null | null | null | null | null |
5f7w | D | null | 0 | B | protein | null | adhesin binding fucosylated histo-blood group antigen | CELL ADHESION | 12/08/15 | Blood group antigen binding adhesin BabA of Helicobacter pylori strain 17875 in complex with blood group B Lewis b heptasaccharide | HELICOBACTER PYLORI; LAMA GLAMA | lama glama | null | helicobacter pylori | Moonens, K., Gideonsson, P., Subedi, S., Romao, E., Oscarson, S., Muyldermans, S., Boren, T., Remaut, H. | 2.81 | X-RAY DIFFRACTION | 0.208 | 0.171 | false | true | IGHV1 | null | null | null | null | null | null | null |
7ps4 | H | L | 0 | E | protein | null | surface glycoprotein | VIRAL PROTEIN | 09/22/21 | Crystal structure of the receptor binding domain of SARS-CoV-2 beta variant spike glycoprotein in complex with Beta-38 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, D., Ren, J., Stuart, D.I. | 1.94 | X-RAY DIFFRACTION | 0.231 | 0.204 | false | true | IGHV5 | IGLV1 | Lambda | null | null | null | null | null |
7zfa | S | T | 0 | D | protein | null | spike protein s1 | VIRAL PROTEIN | 04/01/22 | SARS-CoV-2 Omicron RBD in complex with Omi-6 and COVOX-150 Fabs | Homo sapiens; Severe acute respiratory syndrome coronavirus 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, D., Huo, J., Ren, J., Stuart, D.I. | 4.24 | X-RAY DIFFRACTION | 0.272 | 0.237 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5u6a | B | A | 0 | C | E | protein | protein | NA | NA | immunoglobulin g binding protein a | protein l | IMMUNE SYSTEM | 12/07/16 | CRYSTAL STRUCTURE OF I83E MEDITOPE-ENABLED TRASTUZUMAB WITH AZIDO-PEG3-MEDITOPE | HOMO SAPIENS; FINEGOLDIA MAGNA; STAPHYLOCOCCUS AUREUS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | staphylococcus aureus | finegoldia magna | Williams, J.C., Bzymek, K.P., Pucket, J., Avery, K.A., Ma, Y., Xie, J., Zer, C., Horne, D. | 1.736 | X-RAY DIFFRACTION | 0.188 | 0.159 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
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