pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 354
values | r_factor stringclasses 342
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
2kh2 | B | b | 76 | A | protein | null | interleukin-1 beta | Cytokine/IMMUNE SYSTEM | 03/23/09 | Solution structure of a scFv-IL-1B complex | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | Wilkinson, I.C., Hall, C.J., Veverka, V., Muskett, F.W., Stephens, P.E., Taylor, R.J., Henry, A.J., Carr, M.D. | NOT | SOLUTION NMR | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
5ye4 | C | D | 0 | F | peptide | null | di-acetylated histone h4 | NUCLEAR PROTEIN | 09/15/17 | Crystal structure of the complex of di-acetylated histone H4 and 1A9D7 Fab fragment | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | Matsuda, T., Ito, T., Wakamori, M., Umehara, T. | 1.799 | X-RAY DIFFRACTION | 0.224 | 0.194 | false | true | IGHV9 | IGKV19 | Kappa | null | null | null | null | null |
4hg4 | X | Y | 0 | H | protein | null | hemagglutinin ha2 | VIRAL PROTEIN/IMMUNE SYSTEM | 10/06/12 | Crystal structure of Fab 2G1 in complex with a H2N2 influenza virus hemagglutinin | INFLUENZA A VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus | Xu, R., Wilson, I.A. | 3.2 | X-RAY DIFFRACTION | 0.302 | 0.249 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6jbt | H | L | 0 | F | protein | null | programmed cell death protein 1 | IMMUNE SYSTEM | 01/26/19 | Complex structure of toripalimab-Fab and PD-1 | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Guo, L., Tan, S., Chai, Y., Qi, J., Gao, G.F., Yan, J. | 2.47 | X-RAY DIFFRACTION | 0.252 | 0.201 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7rlw | A | B | 0 | P | peptide | null | pvcspvk210 peptide from circumsporozoite protein | ANTIMICROBIAL PROTEIN | 07/26/21 | Antibody 2F2 in complex with P. vivax CSP peptide GDRAAGQPAGDRAAGQPA | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | plasmodium vivax | Kucharska, I., Julien, J.P. | 2.54 | X-RAY DIFFRACTION | 0.253 | 0.201 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
5a16 | A | B | 0 | null | null | null | null | null | 04/28/15 | Crystal structure of Fab4201 raised against Human Erythrocyte Anion Exchanger 1 | MUS MUSCULUS | mus musculus | mus musculus | null | Arakawa, T., Kobayashi-Yugiri, T., Alguel, Y., Weyand, S., Iwanari, H., Hatae, H., Iwata, M., Abe, Y., Hino, T., Ikeda-Suno, C., Kuma, H., Kang, D., Murata, T., Hamakubo, T., Cameron, A., Kobayashi, T., Hamasaki, N., Iwata, S. | 2.5 | X-RAY DIFFRACTION | 0.2552 | 0.2128 | false | false | IGHV8 | IGKV3 | Kappa | null | null | null | null | null |
6wiz | H | L | 0 | B | A | protein | protein | NA | NA | hemagglutinin ha2 | hemagglutinin ha1 | IMMUNE SYSTEM | 04/11/20 | Crystal structure of Fab 54-1G05 bound to H1 influenza hemagglutinin | INFLUENZA A VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus | influenza a virus | Wu, N.C., Wilson, I.A. | 4.2 | X-RAY DIFFRACTION | 0.389 | 0.323 | false | true | IGHV6 | IGKV3 | Kappa | null | null | null | null | null |
6vpx | K | N | 0 | I | A | peptide | protein | NA | NA | mper peptide | envelope glycoprotein gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 02/04/20 | Nanodisc of full-length HIV-1 Envelope glycoprotein clone AMC011 in complex with one PGT151 Fab and three 10E8 Fabs | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Rantalainen, K., Ward, A.B.W. | 5.0 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
1yjd | H | L | 0 | C | protein | null | t-cell-specific surface glycoprotein cd28 | IMMUNE SYSTEM/SIGNALING PROTEIN | 01/14/05 | Crystal structure of human CD28 in complex with the Fab fragment of a mitogenic antibody (5.11A1) | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Evans, E.J., Esnouf, R.M., Manso-Sancho, R., Gilbert, R.J.C., James, J.R., Sorensen, P., Stuart, D.I., Davis, S.J. | 2.7 | X-RAY DIFFRACTION | 0.282 | 0.239 | false | false | IGHV1 | IGKV10 | Kappa | null | null | null | null | null |
5gs1 | C | c | 0 | null | null | null | null | IMMUNE SYSTEM | 08/13/16 | Crystal structure of homo-specific diabody | HOMO SAPIENS | homo sapiens | null | null | Kim, J.H., Song, D.H., Youn, S.J., Kim, J.W., Cho, G., Lee, H., Lee, J.O. | 2.0 | X-RAY DIFFRACTION | 0.286 | 0.267 | true | true | unknown | unknown | unknown | null | null | null | null | null |
5m2m | E | null | 0 | C | protein | null | tumor necrosis factor | CYTOKINE | 10/13/16 | Complex between human TNF alpha and Llama VHH3 | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | Cambillau, C., Spinelli, S., Desmyter, A., de Haard, H. | 2.3 | X-RAY DIFFRACTION | 0.248 | 0.211 | false | true | IGHV1 | null | null | 0 | -12.037965 | SPR | null | TBD |
7qjj | C | null | 0 | A | protein | null | divalent metal cation transporter | MEMBRANE PROTEIN | 12/16/21 | X-Ray Structure of a Mn2+ soak of EleNRMT in complex with two Nanobodies at 4.6A | EGGERTHELLA LENTA | eggerthella lenta | null | eggerthella lenta | Ramanadane, K., Straub, M.S., Dutzler, R., Manatschal, C. | 4.6 | X-RAY DIFFRACTION | 0.327 | 0.284 | false | true | IGHV1 | null | null | null | null | null | null | null |
6iw2 | H | I | 0 | G | protein | null | envelope protein e | VIRAL PROTEIN/IMMUNE SYSTEM | 12/04/18 | Crystal structure of 5A ScFv in complex with YFV-17D sE in prefusion state | YELLOW FEVER VIRUS (STRAIN 17D VACCINE); HOMO SAPIENS | homo sapiens | homo sapiens | yellow fever virus (strain 17d vaccine) | Lu, X.S., Xiao, H.X., Li, S.H., Pang, X.F. | 2.9 | X-RAY DIFFRACTION | 0.272 | 0.238 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
7tqb | H | L | 0 | A | B | nucleic-acid | nucleic-acid | NA | NA | rna | dna | IMMUNE SYSTEM/DNA-RNA HYBRID | 01/26/22 | Crystal structure of monoclonal S9.6 Fab bound to DNA-RNA hybrid | SYNTHETIC CONSTRUCT; SYNTHETIC CONSTRUCT | synthetic construct | synthetic construct | synthetic construct | synthetic construct | Bou Nader, C., Zhang, J. | 3.1 | X-RAY DIFFRACTION | 0.272 | 0.229 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6yu8 | B | null | 0 | A | protein | null | methyltransferase domain of the l protein | TRANSFERASE | 04/25/20 | RNA Methyltransferase of Sudan Ebola Virus | SUDAN VIRUS - BONIFACE; LAMA GLAMA | lama glama | null | sudan virus - boniface | Ferron, F., Valle, C., Zamboni, V., Canard, B., Decroly, E. | 1.841 | X-RAY DIFFRACTION | 0.215 | 0.195 | false | false | IGHV1 | null | null | null | null | null | null | null |
1ocw | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 02/11/03 | Free conformation Ab2 of the IgE SPE-7 | RATTUS RATTUS | rattus rattus | rattus rattus | null | James, L.C., Roversi, P., Tawfik, D. | 2.0 | X-RAY DIFFRACTION | unknown | unknown | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
7sqo | E | e | 0 | A | B | G | protein | protein | protein | NA | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | guanine nucleotide-binding protein g(i)/g(s)/g(o) subunitgamma-2 | MEMBRANE PROTEIN | 11/05/21 | Structure of the orexin-2 receptor(OX2R) bound to TAK-925, Gi and scFv16 | HOMO SAPIENS; BOS TAURUS; SYNTHETIC CONSTRUCT | synthetic construct | null | homo sapiens | bos taurus | bos taurus | McGrath, A.P., Kang, Y., Flinspach, M. | 3.17 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
4rzc | C | D | 0 | C | carbohydrate | M6P | ALPHA-D-MANNOSE-6-PHOSPHATE | IMMUNE SYSTEM | 12/19/14 | Fv M6P-1 in complex with mannose-6-phosphate | ORYCTOLAGUS CUNICULUS | oryctolagus cuniculus | oryctolagus cuniculus | oryctolagus cuniculus | Blackler, R.J., Evans, D.W., Evans, S.V., Muller-Loennies, S. | 2.723 | X-RAY DIFFRACTION | 0.267 | 0.226 | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
6xdg | C | A | 0 | E | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 06/10/20 | Complex of SARS-CoV-2 receptor binding domain with the Fab fragments of two neutralizing antibodies | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Franklin, M.C., Saotome, K., Romero Hernandez, A., Zhou, Y. | 3.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGLV2 | Lambda | null | null | null | null | null |
6ek2 | I | i | 0 | B | protein | null | cd81 antigen | CELL ADHESION | 09/25/17 | CRYSTAL STRUCTURE OF HUMAN CD81 LARGE EXTRACELLULAR LOOP IN COMPLEX WITH SINGLE CHAIN FV FRAGMENT 10 | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | Harris, S.F., Villasenor, A., Kuglstatter, A. | 2.65 | X-RAY DIFFRACTION | 0.247 | 0.179 | true | true | unknown | unknown | unknown | null | null | null | null | null |
6nnj | D | E | 0 | B | protein | null | envelope glycoprotein gp41 | IMMUNE SYSTEM | 01/15/19 | Crystal Structure of HIV-1 BG505 SOSIP.664 Prefusion Env Trimer Bound to CH31 scFv in Complex with Crystallization Chaperones 3H109L Fab and 35O22 scFv at 3.1 Angstrom | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Lai, Y.-T., Kwong, P.D. | 2.6 | X-RAY DIFFRACTION | 0.293 | 0.248 | false | true | unknown | unknown | unknown | null | null | null | null | null |
5etu | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 11/18/15 | Cetuximab Fab in complex with L5E meditope variant | MUS MUSCULUS, HOMO SAPIENS; SYNTHETIC CONSTRUCT | mus musculus, homo sapiens | mus musculus, homo sapiens | null | Bzymek, K.P., Williams, J.C. | 2.53 | X-RAY DIFFRACTION | 0.232 | 0.180 | false | true | IGHV2 | IGKV5 | Kappa | 0.00013 | -5.30153 | Unknown | null | TBD |
5l7x | H | L | 0 | L | carbohydrate | NAG | N-ACETYL-D-GLUCOSAMINE | IMMUNE SYSTEM | 06/04/16 | Afamin antibody fragment, N14 Fab, L1- glycosylated, crystal form II | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Rupp, B., Naschberger, A. | 1.86 | X-RAY DIFFRACTION | 0.228 | 0.190 | false | false | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
4hj0 | P | Q | 0 | A | protein | null | gastric inhibitory polypeptide receptor | IMMUNE SYSTEM | 10/12/12 | Crystal structure of the human GIPr ECD in complex with Gipg013 Fab at 3-A resolution | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Madhurantakam, C., Ravn, P., Gruetter, M.G., Jackson, R.H. | 3.0 | X-RAY DIFFRACTION | 0.311 | 0.255 | false | true | IGHV1 | IGLV1 | Lambda | 0 | -10.420468 | SPR | null | TBD |
6mar | H | L | 0 | D | C | protein | protein | NA | NA | envelope glycoprotein gp160 | envelope glycoprotein gp160 | MEMBRANE PROTEIN | 08/28/18 | HIV-1 Envelope Glycoprotein Clone BG505 delCT N332T in complex with broadly neutralizing antibody Fab PGT151 | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Berndsen, Z.T., Ward, A.B. | 4.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV2 | Kappa | null | null | null | null | null |
7lab | T | S | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN, IMMUNE SYSTEM | 01/06/21 | Structure of SARS-CoV-2 S protein in complex with N-terminal domain antibody DH1052 | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Manne, K., Acharya, P. | 2.97 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
5i1i | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 02/05/16 | CRYSTAL STRUCTURE OF HUMAN GERMLINE ANTIBODY IGHV3-53/IGKV4-1 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Teplyakov, A., Obmolova, G., Malia, T., Luo, J., Gilliland, G. | 2.5 | X-RAY DIFFRACTION | 0.337 | 0.250 | false | true | IGHV3 | IGKV4 | Kappa | null | null | null | null | null |
7l0n | H | L | 0 | R | protein | null | spike protein s1 | VIRAL PROTEIN/HYDROLASE | 12/11/20 | Circulating SARS-CoV-2 spike N439K variants maintain fitness while evading antibody-mediated immunity | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Snell, G., Czudnochowski, N., Dillen, J., Nix, J.C., Croll, T.I., Corti, D. | 2.78 | X-RAY DIFFRACTION | 0.325 | 0.290 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6qtl | D | null | 0 | D | Hapten | CFF | CAFFEINE | BIOSYNTHETIC PROTEIN | 04/10/19 | Caffeine recognizing nanobody | CAMELIDAE | camelidae | null | camelidae | Lesne, J., Guichou, J.F., Labesse, G., Cohen-Gonsaud, M. | 2.25 | X-RAY DIFFRACTION | 0.259 | 0.194 | false | true | IGHV1 | null | null | null | null | null | null | null |
5i76 | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 02/16/16 | Crystal structure of FM318, a recombinant Fab adopted from cetuximab | HOMO SAPIENS/MUS MUSCULUS XENOGRAFT | homo sapiens/mus musculus xenograft | homo sapiens/mus musculus xenograft | null | Sim, D.W., Kim, J.H., Seok, S.H., Seo, M.D., Kim, Y.P., Won, H.S. | 1.922 | X-RAY DIFFRACTION | 0.201 | 0.166 | false | true | IGHV2 | IGKV5 | Kappa | null | null | null | null | null |
4s2s | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 01/22/15 | Crystal Structure of Fab fragment of monoclonal antibody RoAb13 | MUS MUSCULUS | mus musculus | mus musculus | null | Chain, B., Arnold, J., Akthar, S., Noursadeghi, M., Lapp, T., Ji, C., Naider, D., Zhang, Y., Govada, L., Saridakis, E., Chayen, N.E. | 2.1 | X-RAY DIFFRACTION | 0.234 | 0.186 | false | false | IGHV5 | IGKV8 | Kappa | null | null | null | null | null |
2wzp | F | null | 0 | C | protein | null | putative receptor binding protein | VIRAL PROTEIN | 12/01/09 | Structures of Lactococcal Phage p2 Baseplate Shed Light on a Novel Mechanism of Host Attachment and Activation in Siphoviridae | LACTOCOCCUS PHAGE P2; LAMA GLAMA | lama glama | null | lactococcus phage p2 | Sciara, G., Bebeacua, C., Bron, P., Tremblay, D., Ortiz-Lombardia, M., Lichiere, J., van Heel, M., Campanacci, V., Moineau, S., Cambillau, C. | 2.6 | X-RAY DIFFRACTION | 0.2078 | 0.1789 | false | true | IGHV1 | null | null | null | null | null | null | null |
2p43 | B | null | 0 | A | protein | null | ribonuclease pancreatic | HYDROLASE/IMMUNE SYSTEM | 03/11/07 | Complex of a camelid single-domain vhh antibody fragment with RNASE A at 1.65A resolution: SE3-mono-1 crystal form with three se-met sites (M34, M51, M83) in vhh scaffold | CAMELUS DROMEDARIUS; BOS TAURUS | camelus dromedarius | null | bos taurus | Tereshko, V., Uysal, S., Koide, A., Margalef, K., Koide, S., Kossiakoff, A.A. | 1.65 | X-RAY DIFFRACTION | 0.202 | 0.158 | false | true | IGHV1 | null | null | 0 | -10.59 | Other | 30 | 18445622 |
7neq | D | C | 0 | B | protein | null | atp-binding cassette sub-family g member 2 | MEMBRANE PROTEIN | 02/04/21 | Structure of tariquidar-bound ABCG2 | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Kowal, J., Locher, K. | 3.12 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV13 | Kappa | null | null | null | null | null |
6ea5 | Q | R | 0 | null | null | null | null | VIRAL PROTEIN/immune system | 08/02/18 | Structure of BDBV GPcl in complex with the pan-ebolavirus mAb ADI-15878 | BUNDIBUGYO EBOLAVIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | null | King, L.B., West, B.R., Moyer, C.L., Fusco, M.L., Milligan, J.C., Hui, S., Saphire, E.O. | 4.75 | X-RAY DIFFRACTION | 0.305 | 0.295 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
2kqn | null | A | 10 | null | null | null | null | IMMUNE SYSTEM | 11/11/09 | Solution structure of the AL-09 H87Y immunoglobulin light chain variable domain | HOMO SAPIENS | null | homo sapiens | null | Volkman, B.F., Peterson, F.C., Ramirez-Alvarado, M., Baden, E.M. | NOT | SOLUTION NMR | null | null | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
7m2h | D | E | 0 | F | protein | null | ph-gated potassium channel kcsa | TRANSPORT PROTEIN/IMMUNE SYSTEM | 03/16/21 | Structural Snapshots of Intermediates in the Gating of a K+ Channel | MUS MUSCULUS; STREPTOMYCES LIVIDANS | mus musculus | mus musculus | streptomyces lividans | Reddi, R., Valiyaveetil, F.I. | 2.642 | X-RAY DIFFRACTION | 0.268 | 0.237 | false | true | IGHV1 | IGKV5 | Kappa | null | null | null | null | null |
4ydj | H | L | 0 | G | protein | null | envelope glycoprotein gp160,envelope glycoprotein gp160 | IMMUNE SYSTEM | 02/22/15 | Crystal structure of broadly and potently neutralizing antibody 44-VRC13.01 in complex with HIV-1 clade AE strain 93TH057 gp120 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Zhou, T., Moquin, S., Kwong, P.D. | 2.308 | X-RAY DIFFRACTION | 0.250 | 0.223 | false | true | unknown | IGLV2 | Lambda | null | null | null | null | null |
6rvc | D | null | 0 | A | protein | null | protein patched homolog 1 | MEMBRANE PROTEIN | 05/31/19 | Crystal structure of Patched-1 ectodomain 2 (PTCH1-ECD2) in complex with nanobody 75 | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | Rudolf, A.F., Kowatsch, C., El Omari, K., Malinauskas, T., Kinnebrew, M., Ansell, T.B., Bishop, B., Pardon, E., Schwab, R.A., Qian, M., Duman, R., Covey, D.F., Steyaert, J., Wagner, A., Sansom, M.S.P., Rohatgi, R., Siebold, C. | 2.2 | X-RAY DIFFRACTION | 0.241 | 0.204 | false | true | IGHV1 | null | null | null | null | null | null | null |
3ejz | E | F | 0 | B | protein | null | h(+)/cl(-) exchange transporter clca | IMMUNE SYSTEM/PROTON TRANSPORT | 09/18/08 | Structure of E203V mutant E.coli Cl-/H+ exchanger, CLC-ec1 | ESCHERICHIA COLI; MUS MUSCULUS | mus musculus | mus musculus | escherichia coli | Lim, H.-H., Miller, C. | 2.9 | X-RAY DIFFRACTION | 0.281 | 0.252 | false | false | IGHV4 | IGKV4 | Kappa | null | null | null | null | null |
6csf | A | B | 0 | C | protein | null | sodium/alanine symporter agcs | MEMBRANE PROTEIN | 03/20/18 | Crystal structure of sodium/alanine symporter AgcS with D-alanine bound | METHANOCOCCUS MARIPALUDIS (STRAIN S2 / LL); MUS MUSCULUS | mus musculus | mus musculus | methanococcus maripaludis (strain s2 / ll) | Ma, J., Reyes, F.E., Gonen, T. | 3.3 | X-RAY DIFFRACTION | 0.253 | 0.240 | false | false | IGHV6 | IGKV12 | Kappa | null | null | null | null | null |
5v8m | H | L | 0 | A | protein | null | gp120 | VIRAL PROTEIN/IMMUNE SYSTEM | 03/22/17 | A broadly neutralizing antibody targets the dynamic HIV Envelope trimer apex via a long, rigidified, and anionic beta-hairpin structure | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Lee, J.H., Cottrell, C.A., Ward, A.B. | 4.4 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null |
2qtj | C | O | 2 | null | null | null | null | IMMUNE SYSTEM | 08/02/07 | Solution structure of human dimeric immunoglobulin A | HOMO SAPIENS | homo sapiens | homo sapiens | null | Bonner, A., Furtado, P.B., Almogren, A., Kerr, M.A., Perkins, S.J. | NOT | SOLUTION SCATTERING | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
4fp8 | J | N | 0 | C | protein | null | hemagglutinin ha1 chain | VIRAL PROTEIN/IMMUNE SYSTEM | 06/21/12 | Crystal structure of broadly neutralizing antibody C05 bound to H3 influenza hemagglutinin, HA1 subunit | INFLUENZA A VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus | Ekiert, D.C., Wilson, I.A. | 2.947 | X-RAY DIFFRACTION | 0.241 | 0.212 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6ani | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 08/13/17 | Coltuximab Fab in complex with anti-Kappa VHH domain | LAMA GLAMA; HOMO SAPIENS | homo sapiens | homo sapiens | null | Ereno Orbea, J., Sicard, T., Julien, J.-P. | 2.4 | X-RAY DIFFRACTION | 0.286 | 0.245 | false | true | IGHV1 | IGKV4 | Kappa | 0 | -11.061162 | Unknown | null | TBD |
1bln | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 07/16/98 | ANTI-P-GLYCOPROTEIN FAB MRK-16 | MUS MUSCULUS | mus musculus | mus musculus | null | Vasudevan, S., Tsuruo, T., Rose, D.R. | 2.8 | X-RAY DIFFRACTION | 0.287 | 0.209 | false | false | IGHV5 | IGKV1 | Kappa | null | null | null | null | null |
3hzv | B | A | 0 | A | carbohydrate | KDA | polysaccharide | IMMUNE SYSTEM | 06/24/09 | Crystal structure of S73-2 antibody in complex with antigen Kdo(2.8)Kdo(2.4)Kdo | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Brooks, C.L., Muller-Loennies, S., Borisova, S.N., Brade, L., Kosma, P., Hirama, T., MacKenzie, C.R., Brade, H., Evans, S.V. | 1.9 | X-RAY DIFFRACTION | 0.249 | 0.212 | false | false | IGHV7 | IGKV8 | Kappa | 0 | -8.898799 | Unknown | null | TBD |
6jri | D | null | 0 | null | null | null | null | ANTIVIRAL PROTEIN | 04/04/19 | Crystal structure of Nanobody | VICUGNA PACOS | vicugna pacos | null | null | Mo, X., Li, J., Xu, X., Yuan, A.Y. | 3.101 | X-RAY DIFFRACTION | 0.259 | 0.235 | false | true | IGHV1 | null | null | null | null | null | null | null |
6zfo | H | L | 0 | E | protein | null | spike glycoprotein | IMMUNE SYSTEM | 06/17/20 | Association of two complexes of largely structurally disordered Spike ectodomain with bound EY6A Fab | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Duyvesteyn, H.M.E., Zhou, D., Zhao, Y., Fry, E.E., Ren, J., Stuart, D.I. | 4.4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6v4n | D | E | 0 | W | protein | null | neuraminidase | VIRAL PROTEIN | 11/28/19 | Structure of human 1G05 Fab in complex with influenza virus neuraminidase from B/Phuket/3073/2013 | INFLUENZA B VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | influenza b virus | Dai, Y.N., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID) | 2.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
4ptu | B | A | 0 | B | carbohydrate | RAM | ALPHA-L-RHAMNOSE | IMMUNE SYSTEM | 03/11/14 | Crystal Structure of anti-23F strep Fab C05 with rhamnose | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Bryson, S., Risnes, L., Damgupta, S., Thomson, C.A., Smith, K., Schrader, J.W., Pai, E.F. | 1.511 | X-RAY DIFFRACTION | 0.206 | 0.179 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
6hdc | A | null | 0 | null | null | null | null | TRANSPORT PROTEIN | 08/17/18 | Crystal structure of the potassium channel MtTMEM175 T38A variant in complex with a Nanobody-MBP fusion protein | LAMA GLAMA; ESCHERICHIA COLI (STRAIN K12); MARIVIRGA TRACTUOSA DSM 4126 | lama glama, escherichia coli (strain k12) | null | null | Brunner, J.D., Jakob, R.P., Schulze, T., Neldner, Y., Moroni, A., Thiel, G., Maier, T., Schenck, S. | 3.4 | X-RAY DIFFRACTION | 0.292 | 0.273 | false | true | IGHV1 | null | null | null | null | null | null | null |
4ywg | H | L | 0 | G | protein | null | scaffold hiv-1 gp120 v1v2 region derived from strain zm109 | Viral protein/Immune system | 03/20/15 | Crystal structure of 830A in complex with V1V2 | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1 | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Pan, R., Kong, X. | 2.998 | X-RAY DIFFRACTION | 0.296 | 0.219 | false | true | IGHV4 | IGKV3 | Kappa | null | null | null | null | null |
6w0i | A | B | 0 | C | protein | null | ph-gated potassium channel kcsa | MEMBRANE PROTEIN | 02/29/20 | Closed-gate KcsA soaked in 10mM KCl/5mM BaCl2 | RATTUS NORVEGICUS; STREPTOMYCES LIVIDANS | rattus norvegicus | rattus norvegicus | streptomyces lividans | Rohaim, A., Gong, L., Li, J. | 2.328 | X-RAY DIFFRACTION | 0.232 | 0.200 | false | true | IGHV1 | IGKV5 | Kappa | null | null | null | null | null |
5szf | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 08/13/16 | 2A10 FAB fragment 2.54 Angstoms | HOMO SAPIENS | homo sapiens | homo sapiens | null | Jackson, C.J., Fisher, C. | 2.52 | X-RAY DIFFRACTION | 0.248 | 0.225 | false | true | IGHV9 | IGKV10 | Kappa | null | null | null | null | null |
3auv | C | c | 0 | null | null | null | null | IMMUNE SYSTEM | 02/16/11 | Predicting Amino Acid Preferences in the Complementarity Determining Regions of an Antibody-Antigen Recognition Interface | HOMO SAPIENS | homo sapiens | null | null | Yu, C.M., Peng, H.P., Chen, I.C., Lee, Y.C., Chen, J.B., Tsai, K.C., Chen, C.T., Chang, J.Y., Yang, E.W., Hsu, P.C., Jian, J.W., Hsu, H.J., Chang, H.J., Hsu, W.L., Huang, K.F., Ma, A.C., Yang, A.S. | 2.4 | X-RAY DIFFRACTION | 0.251 | 0.216 | true | true | unknown | unknown | unknown | null | null | null | null | null |
2qtj | A | L | 0 | null | null | null | null | IMMUNE SYSTEM | 08/02/07 | Solution structure of human dimeric immunoglobulin A | HOMO SAPIENS | homo sapiens | homo sapiens | null | Bonner, A., Furtado, P.B., Almogren, A., Kerr, M.A., Perkins, S.J. | NOT | SOLUTION SCATTERING | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
4c57 | D | null | 0 | B | protein | null | cyclin-g-associated kinase | TRANSFERASE | 09/10/13 | Structure of GAK kinase in complex with a nanobody | HOMO SAPIENS; SYNTHETIC CONSTRUCT | lama glama | null | homo sapiens | Chaikuad, A., Keates, T., Krojer, T., Allerston, C.K., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Knapp, S., Muller-Knapp, S. | 2.55 | X-RAY DIFFRACTION | 0.2281 | 0.1776 | false | false | IGHV3 | null | null | null | null | null | null | null |
4d9q | H | L | 0 | A | protein | null | factor d | HYDROLASE/IMMUNE SYSTEM | 01/11/12 | Inhibiting Alternative Pathway Complement Activation by Targeting the Exosite on Factor D | MACACA MULATTA; HOMO SAPIENS | homo sapiens | homo sapiens | macaca mulatta | Murray, J.M., Wiesmann, C. | 2.28 | X-RAY DIFFRACTION | 0.230 | 0.189 | false | true | IGHV7 | IGKV1 | Kappa | 0 | -14.355775 | SPR | null | TBD |
7rco | D | C | 0 | B | protein | null | transforming growth factor beta-2 | IMMUNE SYSTEM | 07/07/21 | Crystal structure of human TGF-beta-2 bound to 4A11.V2 Fab | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Yin, J., Lupardus, P.J., Sudhamsu, J. | 2.9 | X-RAY DIFFRACTION | 0.286 | 0.208 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
4g7y | H | L | 0 | S | protein | null | voltage-sensor containing phosphatase | membrane protein | 07/20/12 | Crystal structure of voltage sensing domain of Ci-VSP with fragment antibody (R217E, 2.8 A) | CIONA INTESTINALIS; HOMO SAPIENS | homo sapiens | homo sapiens | ciona intestinalis | Li, Q. | 2.8 | X-RAY DIFFRACTION | 0.261 | 0.206 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
4xx1 | E | G | 0 | B | protein | null | phosphatidylcholine-sterol acyltransferase | Hydrolase/Immune system | 01/29/15 | Low resolution structure of LCAT in complex with Fab1 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Piper, D.E., Walker, N.P.C., Romanow, W.G., Thibault, S.T. | 3.6 | X-RAY DIFFRACTION | 0.280 | 0.196 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
7fcp | B | D | 0 | A | protein | null | spike protein s1 | ANTIVIRAL PROTEIN | 07/15/21 | Crystallographic structure of two neutralizing antibodies in complex with SARS-CoV-2 spike receptor-binding Domain (RBD) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zheng, P., Jin, T. | 2.4 | X-RAY DIFFRACTION | 0.245 | 0.191 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6x87 | C | D | 0 | X | protein | null | circumsporozoite protein | IMMUNE SYSTEM | 06/01/20 | CryoEM structure of the Plasmodium berghei circumsporozoite protein in complex with inhibitory mouse antibody 3D11. | MUS MUSCULUS; PLASMODIUM BERGHEI | mus musculus | mus musculus | plasmodium berghei | Kucharska, I., Thai, E., Rubinstein, J., Julien, J.P. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
5dt1 | H | L | 0 | L | carbohydrate | NAG | polysaccharide | IMMUNE SYSTEM | 09/17/15 | Crystal structure of human Fab CAP256-VRC26.25, a potent V1V2-directed HIV-1 broadly neutralizing antibody | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Gorman, J., Kwong, P.D. | 1.954 | X-RAY DIFFRACTION | 0.215 | 0.169 | false | true | IGHV3 | IGLV1 | Lambda | null | null | null | null | null |
5jyl | B | b | 0 | A | protein | null | cadherin-3 | CELL ADHESION/IMMUNE SYSTEM | 05/14/16 | Human P-cadherin MEC1 with scFv TSP7 bound | MUS MUSCULUS; HOMO SAPIENS | mus musculus | null | homo sapiens | Caaveiro, J.M.M., Kudo, S., Tsumoto, K. | 2.55 | X-RAY DIFFRACTION | 0.271 | 0.214 | true | true | unknown | unknown | unknown | 0 | -10.996463 | SPR | null | TBD |
6ol7 | A | Q | 0 | null | null | null | null | IMMUNE SYSTEM | 04/15/19 | Crystal structure of glVRC01 scFv in complex with anti-idiotype iv8 scFv | MUS MUSCULUS; HOMO SAPIENS | mus musculus | mus musculus | null | Weidle, C., Pancera, M. | 2.419 | X-RAY DIFFRACTION | 0.224 | 0.174 | false | true | IGHV5 | IGKV8 | Kappa | null | null | null | null | null |
7lez | G | I | 0 | A | C | protein | protein | NA | NA | arginase-1 | arginase-1 | HYDROLASE/IMMUNE SYSTEM | 01/15/21 | Trimeric human Arginase 1 in complex with mAb1 - 2 hArg:2 mAb1 complex | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | homo sapiens | Gomez-Llorente, Y., Scapin, G., Palte, R.L. | 4.15 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
7eh5 | J | N | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN | 03/28/21 | Cryo-EM structure of SARS-CoV-2 S-D614G variant in complex with neutralizing antibodies, RBD-chAb15 and RBD-chAb45 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Yang, T.J., Yu, P.Y., Chang, Y.C., Wu, H.C., Hsu, S.T.D. | 4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV6 | Kappa | null | null | null | null | null |
6ibl | C | null | 0 | A | protein | null | thioredoxin 1,beta-1 adrenergic receptor | IMMUNE SYSTEM | 11/30/18 | ACTIVATED TURKEY BETA1 ADRENOCEPTOR WITH BOUND AGONIST FORMOTEROL AND NANOBODY Nb80 | ESCHERICHIA COLI (STRAIN K12); MELEAGRIS GALLOPAVO; LAMA GLAMA | lama glama | null | escherichia coli (strain k12), meleagrisgallopavo | Warne, T., Edwards, P.C., Dore, A.S., Leslie, A.G.W., Tate, C.G. | 2.7 | X-RAY DIFFRACTION | 0.277 | 0.240 | false | true | IGHV1 | null | null | null | null | null | null | null |
6wzl | A | B | 0 | E | protein | null | c-x-c motif chemokine 7 | IMMUNE SYSTEM | 05/14/20 | LY3041658 Fab bound to CXCL7 | HOMO SAPIENS; MACACA FASCICULARIS | homo sapiens | homo sapiens | macaca fascicularis | Durbin, J.D., Druzina, Z. | 2.29 | X-RAY DIFFRACTION | 0.222 | 0.193 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
7kkk | F | null | 0 | E | protein | null | sars-cov-2 spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 10/27/20 | SARS-CoV-2 Spike in complex with neutralizing nanobody Nb6 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; SYNTHETIC CONSTRUCT | synthetic construct | null | severe acute respiratory syndrome coronavirus2 | Schoof, M.S., Faust, B.F., Saunders, R.A., Sangwan, S., Rezelj, V., Hoppe, N., Boone, M., Billesboelle, C.B., Puchades, C., Azumaya, C.M., Kratochvil, H.T., Zimanyi, M., Desphande, I., Liang, J., Dickinson, S., Nguyen, H.C., Chio, C.M., Merz, G.E., Thompson, M.C., Diwanji, D., Schaefer, K., Anand, A.A., Dobzinski, N., ... | 3.03 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
3zkx | C | null | 0 | A | protein | null | beta-secretase 2 | HYDROLASE | 01/25/13 | TERNARY BACE2 XAPERONE COMPLEX | HOMO SAPIENS; LAMA GLAMA | lama glama | null | homo sapiens | Kuglstatter, A., Banner, D.W., Benz, J., Bertschinger, J., Burger, D., Cuppuleri, S., Debulpaep, M., Gast, A., Grabulovski, D., Gsell, B., Hilpert, H., Huber, W., Kusznir, E., Laeremans, T., Matile, H., Rufer, A., Schlatter, D., Steyeart, J., Stihle, M., Thoma, R., Weber, M., Ruf, A. | 2.37 | X-RAY DIFFRACTION | 0.2085 | 0.1849 | false | true | IGHV3 | null | null | null | null | null | null | null |
2mkw | null | A | 2 | null | null | null | null | IMMUNE SYSTEM | 02/13/14 | Solution Structure of 6aJl2 and 6aJL2-R24G Amyloidogenics Light Chain Proteins | HOMO SAPIENS | null | homo sapiens | null | Amero, C., Maya-Martinez, R.C., Gil-Rodriguez, P.C. | NOT | SOLUTION NMR | null | null | false | true | null | IGLV6 | Lambda | null | null | null | null | null |
4f37 | F | K | 0 | B | protein | null | colicin-e7 immunity protein | IMMUNE SYSTEM | 05/09/12 | Structure of the tethered N-terminus of Alzheimer's disease A peptide | MUS MUSCULUS; ESCHERICHIA COLI | mus musculus | mus musculus | escherichia coli | Nisbet, R.M., Nuttall, S.D., Caine, J.M., Rober, R., Hittaki, M., Pearce, L.A., Davydova, N., Masters, C.L., Varghese, J.N., Streltsov, V.A. | 2.57 | X-RAY DIFFRACTION | 0.269 | 0.223 | false | true | IGHV8 | IGKV1 | Kappa | 0 | -11.268161 | SPR | null | TBD |
7f8w | D | d | 0 | B | A | C | protein | protein | peptide | NA | NA | NA | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | guanine nucleotide-binding protein g(q) subunit alpha | guanine nucleotide-binding protein g(i)/g(s)/g(o) subunitgamma-2 | STRUCTURAL PROTEIN | 07/02/21 | Cryo-EM structure of the cholecystokinin receptor CCKBR in complex with gastrin-17 and Gq | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | null | homo sapiens | homo sapiens | homo sapiens | Zhang, X., He, C., Wang, M., Zhou, Q., Yang, D., Zhu, Y., Wu, B., Zhao, Q. | 3.1 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
1wt5 | B | D | 0 | null | null | null | null | IMMUNE SYSTEM | 11/16/04 | The Crystal Structure Of A Humanized Antibody Fv 528 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Makabe, K., Tsumoto, K., Asano, R., Kondo, H., Kumagai, I. | 2.1 | X-RAY DIFFRACTION | 0.301 | 0.273 | false | true | IGHV1 | IGKV2 | Kappa | null | null | null | null | null |
7vl9 | S | s | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 10/02/21 | Cryo-EM structure of the CCL15(26-92) bound CCR1-Gi complex | HOMO SAPIENS | homo sapiens | null | homo sapiens | homo sapiens | Shao, Z., Shen, Q., Mao, C., Yao, B., Chen, L., Zhang, H., Shen, D., Zhang, C., Li, W., Du, X., Li, F., Ma, H., Chen, Z., Xu, H.E., Ying, S., Zhang, Y., Shen, H. | 2.6 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
4r2g | Q | P | 0 | E | protein | null | surface protein gp160 | IMMUNE SYSTEM | 08/11/14 | Crystal Structure of PGT124 Fab bound to HIV-1 JRCSF gp120 core and to CD4 | HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 (JRCSF ISOLATE); HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus type 1 (jrcsfisolate) | Garces, F., Wilson, I.A. | 3.283 | X-RAY DIFFRACTION | 0.263 | 0.207 | false | true | IGHV4 | IGLV3 | Lambda | 0 | -10.188886 | ITC | null | TBD |
6w4w | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 03/11/20 | Crystal Structure of the Fab fragment of humanized 5c8 antibody | HOMO SAPIENS | homo sapiens | homo sapiens | null | Henderson, J.N., Mills, J.H., Simmons, C.R. | 1.77 | X-RAY DIFFRACTION | 0.204 | 0.169 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
2y36 | H | L | 0 | P | peptide | null | dodecapeptide (dlwttaiptips) | IMMUNE SYSTEM | 12/18/10 | Crystal structure analysis of the anti-(4-hydroxy-3-nitrophenyl)- acetyl murine germline antibody BBE6.12H3 Fab fragment in complex with a phage display derived dodecapeptide DLWTTAIPTIPS | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | synthetic construct | Khan, T., Salunke, D.M. | 2.7 | X-RAY DIFFRACTION | 0.2477 | 0.2305 | false | false | IGHV1 | IGLV1 | Lambda | 0 | -8.758742 | Unknown | null | TBD |
7w9e | D | E | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN | 12/09/21 | SARS-CoV-2 Delta S-8D3 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS | mus musculus | mus musculus | severe acute respiratory syndrome coronavirus2 | Cong, Y., Liu, C.X. | 3.1 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV6 | Kappa | null | null | null | null | null |
7tcc | J | K | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/Immune System | 12/23/21 | Cryo-EM structure of SARS-CoV-2 Omicron spike in complex with antibodies A19-46.1 and B1-182.1 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, T., Kwong, P.D. | 3.86 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
1jpt | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 08/03/01 | Crystal Structure of Fab D3H44 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Faelber, K., Kirchhofer, D., Presta, L., Kelley, R.F., Muller, Y.A. | 1.85 | X-RAY DIFFRACTION | 0.228 | 0.182 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
2q1e | null | B | 0 | null | null | null | null | PROTEIN FIBRIL | 05/24/07 | Altered dimer interface decreases stability in an amyloidogenic kappa1 Bence Jones protein. | HOMO SAPIENS | null | homo sapiens | null | Thompson, J.R., Ramirez-Alvarado, M., Baden, E.M. | 2.55 | X-RAY DIFFRACTION | 0.206 | 0.165 | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
7ej0 | H | h | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(o) subunit alpha | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 04/01/21 | Structure of the alpha2A-adrenergic receptor GoA signaling complex | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | homo sapiens | Xu, J., Cao, S., Liu, Z., Du, Y. | 3.2 | ELECTRON MICROSCOPY | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
5ivo | A | null | 0 | null | null | null | null | PEPTIDE BINDING PROTEIN | 03/21/16 | BC2 nanobody | VICUGNA PACOS | vicugna pacos | null | null | Braun, M.B., Stehle, T. | 1.8 | X-RAY DIFFRACTION | 0.222 | 0.187 | false | true | IGHV1 | null | null | null | null | null | null | null |
7duo | H | L | 0 | B | protein | null | adp-ribosyl cyclase/cyclic adp-ribose hydrolase 1 | ANTITUMOR PROTEIN/HYDROLASE | 01/10/21 | Crystal structure of daratumumab fab and CD38 complex | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Yu, X.J., Wang, L., Yu, C.F. | 2.81 | X-RAY DIFFRACTION | 0.238 | 0.231 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
4qnp | E | F | 0 | B | A | protein | protein | NA | NA | neuraminidase | neuraminidase | HYDROLASE/IMMUNE SYSTEM | 06/18/14 | Crystal structure of the 2009 pandemic H1N1 influenza virus neuraminidase with a neutralizing antibody | INFLUENZA A VIRUS; MUS MUSCULUS | mus musculus | mus musculus | influenza a virus | influenza a virus | Wan, H.Q., Yang, H., Shore, D.A., Garten, R.J., Couzens, L., Gao, J., Jiang, L.L., Carney, P.J., Villanueva, J., Stevens, J., Eichelberger, M.C. | 2.8 | X-RAY DIFFRACTION | 0.224 | 0.181 | false | true | IGHV10 | IGKV4 | Kappa | null | null | null | null | null |
4hzl | A | B | 0 | F | peptide | null | e2 envelop protein | IMMUNE SYSTEM | 11/15/12 | Neutralizing antibody mAb#8 in complex with the Epitope II of HCV E2 envelope protein | MUS MUSCULUS; RECOMBINANT HEPATITIS C VIRUS H77(5'UTR-NS2)/JFH1_V787A,Q1247L | mus musculus | mus musculus | recombinant hepatitis c virus h77(5'utr-ns2)/jfh1_v787a,q1247l | Deng, L., Zhang, P. | 2.85 | X-RAY DIFFRACTION | 0.277 | 0.221 | false | false | IGHV5 | IGKV1 | Kappa | null | null | null | null | null |
5mv3 | U | V | 0 | W | peptide | null | synthetic peptide containing the cii583-591 epitope ofcollagen type ii,collagen alpha-1(ii) chain,synthetic peptide containing the cii583-591 epitope of collagen type ii, | IMMUNE SYSTEM | 01/15/17 | ACC1 Fab fragment in complex with CII583-591 (CG10) | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | mus musculus | Dobritzsch, D., Holmdahl, R., Ge, C. | 2.95 | X-RAY DIFFRACTION | 0.261 | 0.202 | false | false | IGHV6 | IGKV3 | Kappa | null | null | null | null | null |
7e3k | D | E | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 02/09/21 | Ultrapotent SARS-CoV-2 neutralizing antibodies with protective efficacy against newly emerged mutational variants | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Guo, H., Li, T., Liu, F., Gao, Y., Ji, X., Yang, H. | 3.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6uht | C | null | 0 | A | protein | null | botulinum neurotoxin type b | TOXIN/ANTITOXIN | 09/28/19 | Crystal structure of BoNT/B receptor-binding domain in complex with VHH JLI-G10 | CLOSTRIDIUM BOTULINUM; VICUGNA PACOS | vicugna pacos | null | clostridium botulinum | Lam, K., Jin, R. | 2.20001 | X-RAY DIFFRACTION | 0.211 | 0.194 | false | true | IGHV1 | null | null | null | null | null | null | null |
6qx4 | E | null | 0 | B | protein | null | s-layer protein sap | STRUCTURAL PROTEIN | 03/07/19 | Structure of the Bacillus anthracis Sap S-layer assembly domain | BACILLUS ANTHRACIS; LAMA GLAMA | lama glama | null | bacillus anthracis | Remaut, H., Fioravanti, A. | 3.27 | X-RAY DIFFRACTION | 0.218 | 0.173 | false | true | IGHV1 | null | null | null | null | null | null | null |
2kqm | null | B | 12 | null | null | null | null | IMMUNE SYSTEM | 11/11/09 | Solution structure of the KI O18/O8 Y87H immunoglobulin light chain variable domain | HOMO SAPIENS | null | homo sapiens | null | Volkman, B.F., Peterson, F.C., Ramirez-Alvarado, M., Baden, E.M. | NOT | SOLUTION NMR | null | null | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
7jtr | B | b | 0 | A | protein | null | maltose/maltodextrin-binding periplasmic protein | SUGAR BINDING PROTEIN/IMMUNE SYSTEM | 08/18/20 | Complex of maltose-binding protein (MBP) with single-chain Fv (scFv) | MUS MUSCULUS; ESCHERICHIA COLI | mus musculus | null | escherichia coli | Loll, P.J. | 2.5 | X-RAY DIFFRACTION | 0.237 | 0.201 | true | true | unknown | unknown | unknown | null | null | null | null | null |
6ikm | I | i | 0 | null | null | null | null | ANTIMICROBIAL PROTEIN | 10/16/18 | Crystal structure of SpuE-Spermidine in complex with ScFv5 | PSEUDOMONAS AERUGINOSA; HOMO SAPIENS | pseudomonas aeruginosa | homo sapiens | null | Wu, D., Sun, X. | 3.398 | X-RAY DIFFRACTION | 0.268 | 0.228 | true | true | unknown | unknown | unknown | null | null | null | null | null |
7ll2 | K | M | 0 | E | protein | null | envelope glycoprotein gp120 | IMMUNE SYSTEM/VIRAL PROTEIN | 02/03/21 | Cryo-EM structure of BG505 DS-SOSIP in complex with Glycan276-Dependent Broadly Neutralizing Antibody VRC33.01 Fab | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Manne, K., Acharya, P. | 3.73 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
7n8h | C | B | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 06/14/21 | SARS-CoV-2 S (B.1.429 / epsilon variant) + S2M11 + S2L20 Global Refinement | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | McCallum, M., Veesler, D., Seattle Structural Genomics Center for Infectious Disease (SSGCID) | 2.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6nc3 | R | W | 0 | M | F | protein | protein | NA | NA | hiv-1 env amc011 v4.2 sosip gp41 | hiv-1 env amc011 v4.2 sosip gp120 | IMMUNE SYSTEM | 12/10/18 | AMC011 v4.2 SOSIP Env trimer in complex with fusion peptide targeting antibody VRC34 fragment antigen binding | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Cottrell, C.A., Ozorowski, G., Torres, J.L., Ward, A.B. | 4.5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
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