pdb stringlengths 4 4 | Hchain stringclasses 59
values | Lchain stringclasses 60
values | model int64 0 76 | antigen_chain stringclasses 386
values | antigen_type stringclasses 24
values | antigen_het_name stringclasses 240
values | antigen_name stringlengths 1 396 ⌀ | short_header stringclasses 448
values | date stringlengths 8 8 | compound stringlengths 4 243 | organism stringlengths 3 175 ⌀ | heavy_species stringclasses 121
values | light_species stringclasses 67
values | antigen_species stringclasses 937
values | authors stringlengths 6 762 | resolution stringlengths 1 8 | method stringclasses 10
values | r_free stringclasses 354
values | r_factor stringclasses 342
values | scfv bool 2
classes | engineered bool 2
classes | heavy_subclass stringclasses 14
values | light_subclass stringclasses 35
values | light_ctype stringclasses 3
values | affinity float64 0 0 ⌀ | delta_g float64 -16.91 -5.04 ⌀ | affinity_method stringclasses 11
values | temperature float64 4 37 ⌀ | pmid stringclasses 157
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
4m61 | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 08/08/13 | Crystal structure of unliganded anti-DNA Fab A52 | MUS MUSCULUS | mus musculus | mus musculus | null | Stanfield, R.L., Eilat, D., Wilson, I.A. | 1.62 | X-RAY DIFFRACTION | 0.232 | 0.192 | false | false | IGHV1 | IGKV8 | Kappa | null | null | null | null | null |
7bts | B | null | 0 | A | protein | null | lysozyme-beta-1 adrenergic receptor chimera | MEMBRANE PROTEIN | 04/02/20 | Structure of human beta1 adrenergic receptor bound to epinephrine and nanobody 6B9 | ENTEROBACTERIA PHAGE T4; HOMO SAPIENS; VICUGNA PACOS | vicugna pacos | null | enterobacteria phage t4, homo sapiens | Xu, X., Kaindl, J., Clark, M., Hubner, H., Hirata, K., Sunahara, R., Gmeiner, P., Kobilka, B.K., Liu, X. | 3.13 | X-RAY DIFFRACTION | 0.259 | 0.236 | false | true | IGHV1 | null | null | null | null | null | null | null |
1vhp | A | null | 18 | null | null | null | null | IMMUNOGLOBULIN | 04/16/96 | VH-P8, NMR | HOMO SAPIENS | homo sapiens | null | null | Riechmann, L. | NOT | SOLUTION NMR | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null |
3kym | J | I | 0 | null | null | null | null | IMMUNE SYSTEM | 12/06/09 | Crystal structure of Li33 IgG2 di-Fab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Silvian, L.F., Pepinsky, R.B., Walus, L. | 2.62 | X-RAY DIFFRACTION | 0.339 | 0.259 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
6itq | C | null | 0 | C | Hapten | HCY | (11ALPHA,14BETA)-11,17,21-TRIHYDROXYPREGN-4-ENE-3,20-DIONE | IMMUNE SYSTEM | 11/24/18 | Crystal structure of cortisol complexed with its nanobody at pH 10.5 | CAMELUS BACTRIANUS | camelus bactrianus | null | camelus bactrianus | Ding, Y., Ding, L.L., Wang, Z.Y., Zhong, P.Y. | 1.526 | X-RAY DIFFRACTION | 0.256 | 0.223 | false | true | unknown | unknown | unknown | null | null | null | null | null |
3vrl | H | L | 0 | C | protein | null | gag protein | IMMUNE SYSTEM/VIRAL PROTEIN | 04/12/12 | Crystal structure of BMJ4 p24 capsid protein in complex with A10F9 Fab | HUMAN IMMUNODEFICIENCY VIRUS 1; MUS MUSCULUS | mus musculus | mus musculus | human immunodeficiency virus 1 | Gu, Y., Cao, F., Li, S., Yuan, Y.A., Xia, N. | 3.2 | X-RAY DIFFRACTION | 0.292 | 0.211 | false | false | IGHV5 | IGKV12 | Kappa | null | null | null | null | null |
7p77 | H | null | 0 | E | protein | null | spike glycoprotein | VIRAL PROTEIN | 07/19/21 | SARS-CoV-2 spike protein in complex with sybody#15 and sybody#68 in a 3up conformation | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; SYNTHETIC CONSTRUCT | synthetic construct | null | severe acute respiratory syndrome coronavirus2 | Walter, J.D., Hutter, C.A.J., Garaeva, A.A., Scherer, M., Zimmermann, I., Wyss, M., Rheinberger, J., Ruedin, Y., Earp, J.C., Egloff, P., Sorgenfrei, M., Huerlimann, L.M., Gonda, I., Meier, G., Remm, S., Thavarasah, S., Zimmer, G., Slotboom, D.J., Paulino, C., Plattet, P., Seeger, M.A. | 2.98 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
1um4 | H | L | 0 | H | Hapten | SH4 | (1R)-1-PHENYLETHYL 4-(ACETYLAMINO)BENZYLPHOSPHONATE | IMMUNE SYSTEM | 09/23/03 | Catalytic Antibody 21H3 with hapten | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Beuscher IV, A.E., Reuter, J., Olson, A.J., Romesberg, F.E., Schultz, P.G., Wirsching, P., Janda, K.D., Lerner, R.A., Stevens, R.C. | 1.8 | X-RAY DIFFRACTION | 0.249 | 0.223 | false | true | IGHV1 | IGKV9 | Kappa | null | null | null | null | null |
7kfw | C | D | 0 | B | protein | null | surface glycoprotein | IMMUNE SYSTEM/Viral protein | 10/15/20 | Structural basis for a germline-biased antibody response to SARS-CoV-2 (RBD:C1A-B3 Fab) | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Pan, J., Abraham, J., Clark, L., Clark, S. | 2.792 | X-RAY DIFFRACTION | 0.229 | 0.189 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
5t29 | H | L | 0 | O | protein | null | 10e8 epitope scaffold t117v2 | IMMUNE SYSTEM | 08/23/16 | Crystal structure of 10E8 Fab light chain mutant3, against the MPER region of the HIV-1 Env, in complex with the MPER epitope scaffold T117v2 | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | synthetic construct | Irimia, A., Wilson, I.A. | 2.03 | X-RAY DIFFRACTION | 0.213 | 0.174 | false | true | IGHV3 | IGLV3 | Lambda | 0 | -12.853036 | SPR | null | TBD |
2v7h | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 07/30/07 | Crystal structure of an immunogen specific anti-mannopyranoside monoclonal antibody Fab fragment | MUS MUSCULUS | mus musculus | mus musculus | null | Krishnan, L., Sahni, G., Kaur, K.J., Salunke, D.M. | 2.8 | X-RAY DIFFRACTION | 0.2676 | 0.2424 | false | false | IGHV1 | IGKV10 | Kappa | null | null | null | null | null |
4kk8 | E | F | 0 | B | protein | null | h(+)/cl(-) exchange transporter clca | TRANSPORT PROTEIN | 05/05/13 | Structure of the E148Q mutant of CLC-ec1 deltaNC construct in 100mM fluoride | ESCHERICHIA COLI; MUS MUSCULUS | mus musculus | mus musculus | escherichia coli | Lim, H.-H., Miller, C. | 2.86 | X-RAY DIFFRACTION | 0.256 | 0.210 | false | true | IGHV4 | IGKV4 | Kappa | null | null | null | null | null |
4kkb | E | F | 0 | B | protein | null | h(+)/cl(-) exchange transporter clca | TRANSPORT PROTEIN | 05/05/13 | Structure of the E148A mutant of CLC-ec1 deltaNC construct in 20mM fluoride and 20mM Bromide | ESCHERICHIA COLI; MUS MUSCULUS | mus musculus | mus musculus | escherichia coli | Lim, H.-H., Miller, C. | 3.021 | X-RAY DIFFRACTION | 0.268 | 0.236 | false | true | IGHV4 | IGKV4 | Kappa | null | null | null | null | null |
4zyp | N | O | 0 | B | protein | null | fusion glycoprotein f0,fibritin | IMMUNE SYSTEM | 05/21/15 | Crystal Structure of Motavizumab and Quaternary-Specific RSV-Neutralizing Human Antibody AM14 in Complex with Prefusion RSV F Glycoprotein | MUS MUSCULUS; HUMAN RESPIRATORY SYNCYTIAL VIRUS A (STRAIN A2); HOMO SAPIENS | mus musculus | mus musculus | human respiratory syncytial virus a (straina2), enterobacteria phage t4 | Gilman, M.S.A., McLellan, J.S. | 5.5 | X-RAY DIFFRACTION | 0.277 | 0.211 | false | true | IGHV2 | IGKV1 | Kappa | null | null | null | null | null |
4wfg | G | F | 0 | B | protein | null | potassium channel subfamily k member 4 | METAL TRANSPORT | 09/15/14 | Human TRAAK K+ channel in a Tl+ bound conductive conformation | MUS MUSCULUS; HOMO SAPIENS | mus musculus | mus musculus | homo sapiens | Brohawn, S.G., MacKinnon, R. | 3.0 | X-RAY DIFFRACTION | 0.236 | 0.202 | false | true | IGHV1 | IGKV4 | Kappa | null | null | null | null | null |
2q76 | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 06/06/07 | Mouse anti-hen egg white lysozyme antibody F10.6.6 Fab fragment | MUS MUSCULUS | mus musculus | mus musculus | null | Cauerhff, A., Klinke, S., Acierno, J.P., Goldbaum, F.A., Braden, B.C. | 2.0 | X-RAY DIFFRACTION | 0.233 | 0.196 | false | false | IGHV1 | IGKV5 | Kappa | null | null | null | null | null |
5w9m | B | C | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN | 06/23/17 | MERS S ectodomain trimer in complex with variable domain of neutralizing antibody G4 | MIDDLE EAST RESPIRATORY SYNDROME-RELATED CORONAVIRUS; MUS MUSCULUS | mus musculus | mus musculus | middle east respiratory syndrome-relatedcoronavirus | Pallesen, J., Ward, A.B. | 4.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6n1v | X | Z | 0 | A | protein | null | pgt122 light chain | VIRAL PROTEIN | 11/12/18 | Cryo-EM structure at 4.0 A resolution of vaccine-elicited antibody A12V163-a.01 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | MACACA MULATTA; HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Acharya, P., Kwong, P.D. | 4 | ELECTRON MICROSCOPY | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null |
1ind | H | L | 0 | H | Hapten | EOT | [(1-[(BIS-CARBOXYMETHYL-AMINO)-METHYL]-2-{4-[3-(2-HYDROXY-ETHYL)-THIOUREIDO]-PHENY}-ETHYL)-CARBOXYMETHYL-AMINO]-ACETIC ACID | IMMUNOGLOBULIN | 06/14/93 | HOW THE ANTI-(METAL CHELATE) ANTIBODY CHA255 IS SPECIFIC FOR THE METAL ION OF ITS ANTIGEN: X-RAY STRUCTURES FOR TWO FAB'(SLASH)HAPTEN COMPLEXES WITH DIFFERENT METALS IN THE CHELATE | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Love, R.A., Butler, W.F. | 2.2 | X-RAY DIFFRACTION | unknown | 0.188 | false | false | IGHV5 | IGLV1 | Lambda | 0 | -13.62 | Other | 37 | 8218161 |
1hkl | H | L | 0 | null | null | null | null | CATALYTIC ANTIBODY | 12/20/96 | FREE AND LIGANDED FORM OF AN ESTEROLYTIC CATALYTIC ANTIBODY | HOMO SAPIENS | homo sapiens | homo sapiens | null | Wedemayer, G.J., Wang, L.H., Patten, P.A., Schultz, P.G., Stevens, R.C. | 2.68 | X-RAY DIFFRACTION | 0.244 | 0.184 | false | true | IGHV14 | IGKV9 | Kappa | null | null | null | null | null |
3b2u | F | G | 0 | E | protein | null | epidermal growth factor receptor | IMMUNE SYSTEM/TRANSFERASE | 10/19/07 | Crystal structure of isolated domain III of the extracellular region of the epidermal growth factor receptor in complex with the Fab fragment of IMC-11F8 | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Ferguson, K.M., Li, S., Kussie, P. | 2.58 | X-RAY DIFFRACTION | 0.291 | 0.227 | false | true | IGHV4 | IGKV3 | Kappa | 0 | -12.27 | SPR | 25 | 18275813 |
7kxk | H | L | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/Immune System | 12/04/20 | SARS-CoV-2 spike protein in complex with Fab 15033-7, 2-""up""-1-""down"" conformation | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Li, Z., Rini, J. | 5 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6ozc | H | L | 0 | A | carbohydrate | MAN | ALPHA-D-MANNOSE | VIRAL PROTEIN | 05/20/20 | BG505 SOSIP.664 with 2G12 Fab2 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Cottrell, C.A., Ward, A.B. | 3.79 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null |
5xli | c | a | 0 | null | null | null | null | IMMUNE SYSTEM | 05/10/17 | Structure of anti-Angiotensin II type2 receptor antibody (D5711-4A03) | MUS MUSCULUS | mus musculus | mus musculus | null | Asada, H., Horita, S., Iwata, S., Hirata, K. | 1.696 | X-RAY DIFFRACTION | 0.216 | 0.180 | false | false | IGHV5 | IGKV4 | Kappa | null | null | null | null | null |
6oq6 | D | null | 0 | A | protein | null | toxin b | TOXIN | 04/25/19 | Structure of the pore forming fragment of Clostridium difficile toxin B in complex with VHH 5D | CLOSTRIDIOIDES DIFFICILE; CAMELIDAE | camelidae | null | clostridioides difficile | Chen, P., Lam, K., Jin, R. | 2.97 | X-RAY DIFFRACTION | 0.274 | 0.259 | false | true | IGHV1 | null | null | null | null | null | null | null |
6ul4 | B | null | 0 | A | protein | null | botulinum neurotoxin type b | TOXIN/ANTITOXIN | 10/06/19 | Crystal structure of BoNT/B receptor-binding domain in complex with VHH JLO-G11 | CLOSTRIDIUM BOTULINUM; VICUGNA PACOS | vicugna pacos | null | clostridium botulinum | Lam, K., Jin, R. | 3.18424 | X-RAY DIFFRACTION | 0.258 | 0.204 | false | true | IGHV1 | null | null | null | null | null | null | null |
4evn | G | H | 0 | null | null | null | null | immune system | 04/26/12 | Crystal Structure of Fab CR6261 (somatic heavy chain with germline-reverted light chain) | HOMO SAPIENS | homo sapiens | homo sapiens | null | Whittle, J.R.R. | 2.851 | X-RAY DIFFRACTION | 0.293 | 0.230 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
2fjf | I | G | 0 | null | null | null | null | IMMUNE SYSTEM | 01/02/06 | Structure of the G6 Fab, a phage derived VEGF binding Fab | HOMO SAPIENS | homo sapiens | homo sapiens | null | Wiesmann, C. | 2.65 | X-RAY DIFFRACTION | 0.248 | 0.199 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6wor | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 04/25/20 | Structure of the broadly neutralizing antibody HC1AM | HOMO SAPIENS | homo sapiens | homo sapiens | null | Tzarum, N., Wilson, I.A., Law, M. | 2.601 | X-RAY DIFFRACTION | 0.253 | 0.219 | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
7lll | N | null | 0 | A | B | protein | protein | NA | NA | guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | MEMBRANE PROTEIN | 02/04/21 | Exendin-4-bound Glucagon-Like Peptide-1 (GLP-1) Receptor in complex with Gs protein | HOMO SAPIENS; LAMA GLAMA; HELODERMA SUSPECTUM | lama glama | null | homo sapiens | homo sapiens | Wootten, D., Sexton, P.M., Belousoff, M.J., Danev, R., Zhang, X., Khoshouei, M., Venugopal, H. | 3.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | null | null | null | null | null | null | null |
4dag | H | L | 0 | A | protein | null | fusion glycoprotein f0 | VIRAL PROTEIN/IMMUNE SYSTEM | 01/12/12 | Structure of the Human Metapneumovirus Fusion Protein with Neutralizing Antibody Identifies a Pneumovirus Antigenic Site | HUMAN METAPNEUMOVIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | human metapneumovirus | Jardetzky, T.S., Wen, X. | 3.3904 | X-RAY DIFFRACTION | 0.289 | 0.260 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
7lu9 | l | k | 0 | f | protein | null | unknown | VIRAL PROTEIN/IMMUNE SYSTEM | 02/21/21 | Cryo-EM structure of DH851.3 bound to HIV-1 CH505 Env | MACACA MULATTA; HUMAN IMMUNODEFICIENCY VIRUS 1 | macaca mulatta | macaca mulatta | human immunodeficiency virus 1 | Manne, K., Edwards, R.J., Acharya, P. | 5.6 | ELECTRON MICROSCOPY | null | null | false | false | IGHV2 | IGLV2 | Lambda | null | null | null | null | null |
3c09 | H | L | 0 | D | protein | null | epidermal growth factor receptor | IMMUNE SYSTEM/TRANSFERASE | 01/18/08 | Crystal structure the Fab fragment of matuzumab (Fab72000) in complex with domain III of the extracellular region of EGFR | HOMO SAPIENS, MUS MUSCULUS; HOMO SAPIENS | homo sapiens, mus musculus | homo sapiens, mus musculus | homo sapiens | Ferguson, K.M., Schmiedel, J., Knoechel, T. | 3.2 | X-RAY DIFFRACTION | 0.299 | 0.242 | false | true | IGHV1 | IGKV1 | Kappa | 0 | -10.04 | SPR | 25 | 18394559 |
6vl8 | E | F | 0 | E | Hapten | PEU | 2,5,8,11,14,17,20,23,26,29,32,35,38,41,44,47,50,53,56,59,62,65,68,71,74,77,80-HEPTACOSAOXADOOCTACONTAN-82-OL | IMMUNE SYSTEM | 01/23/20 | Anti-PEG antibody 6-3 Fab fragment in complex with PEG | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Nicely, N.I., Huckaby, J.T., Lai, S.K., Jacobs, T.M. | 2.42 | X-RAY DIFFRACTION | 0.240 | 0.185 | false | true | IGHV9 | IGKV8 | Kappa | null | null | null | null | null |
1ngz | B | A | 0 | null | null | null | null | IMMUNE SYSTEM | 12/18/02 | Chimeric Germline Fab 7g12-apo | MUS MUSCULUS, HOMO SAPIENS | mus musculus, homo sapiens | mus musculus, homo sapiens | null | Yin, J., Andryski, S.A., Beuscher, A.B., Stevens, R.C., Schultz, P.G. | 1.6 | X-RAY DIFFRACTION | 0.233 | 0.207 | false | true | IGHV1 | IGKV6 | Kappa | null | null | null | null | null |
6fxn | D | E | 0 | A | protein | null | tumor necrosis factor ligand superfamily member 13b | IMMUNE SYSTEM | 03/09/18 | Crystal structure of human BAFF in complex with Fab fragment of anti-BAFF antibody belimumab | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Lammens, A., Maskos, K., Willen, L., Jiang, X., Schneider, P. | 2.9 | X-RAY DIFFRACTION | 0.231 | 0.191 | false | true | IGHV1 | IGLV3 | Lambda | null | null | null | null | null |
3nh7 | K | O | 0 | D | protein | null | bone morphogenetic protein receptor type-1a | IMMUNE SYSTEM | 06/14/10 | Crystal structure of the neutralizing Fab fragment AbD1556 bound to the BMP type I receptor IA | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Mueller, T.D., Harth, S., Sebald, W. | 2.7 | X-RAY DIFFRACTION | 0.280 | 0.234 | false | true | IGHV3 | IGLV3 | Lambda | 0 | -10.5 | SPR | 25 | 20927405 |
5boz | G | null | 0 | A | protein | null | ricin | Hydrolase/Immune system | 05/27/15 | Ricin A chain bound to camelid nanobody (VHH9)(E1) | RICINUS COMMUNIS; LAMA GLAMA | lama glama | null | ricinus communis | Rudolph, M.J., Mantis, N. | 3.1 | X-RAY DIFFRACTION | 0.277 | 0.215 | false | true | IGHV1 | null | null | 0 | -12.489521 | SPR | null | TBD |
3muh | null | L | 0 | L | carbohydrate | NAG | polysaccharide | IMMUNE SYSTEM | 05/03/10 | Crystal structure of PG9 light chain | HOMO SAPIENS | null | homo sapiens | homo sapiens | Pejchal, R., Walker, L.M., Burton, D.R., Wilson, I.A. | 3.0 | X-RAY DIFFRACTION | 0.277 | 0.245 | false | true | null | IGLV2 | Lambda | null | null | null | null | null |
7mxe | H | L | 0 | G | D | protein | protein | NA | NA | envelope glycoprotein bg505 sosip.664 gp120 | hiv-1 envelope glycoprotein bg505 sosip.664 gp41 | ANTIVIRAL PROTEIN/VIRAL PROTEIN | 05/19/21 | Ab1245 Fab in complex with BG505 SOSIP.664 and 8ANC195 Fab | HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1; MACACA MULATTA | homo sapiens | homo sapiens | human immunodeficiency virus 1 | human immunodeficiency virus 1 | Abernathy, M.E., Bjorkman, P.J. | 3.7 | ELECTRON MICROSCOPY | null | null | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null |
7lqv | H | L | 0 | A | protein | null | spike glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 02/15/21 | Cryo-EM structure of NTD-directed neutralizing antibody 4-8 Fab in complex with SARS-CoV-2 S2P spike | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Gorman, J., Rapp, M., Kwong, P.D., Shapiro, L. | 3.25 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGLV3 | Lambda | null | null | null | null | null |
2kh2 | B | b | 70 | A | protein | null | interleukin-1 beta | Cytokine/IMMUNE SYSTEM | 03/23/09 | Solution structure of a scFv-IL-1B complex | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | Wilkinson, I.C., Hall, C.J., Veverka, V., Muskett, F.W., Stephens, P.E., Taylor, R.J., Henry, A.J., Carr, M.D. | NOT | SOLUTION NMR | null | null | true | true | unknown | unknown | unknown | null | null | null | null | null |
6wn1 | E | F | 0 | D | protein | null | reticulocyte binding protein 2b | CELL INVASION | 04/22/20 | Plasmodium vivax reticulocyte binding protein 2b (PvRBP2b) bound to human monoclonal antibody 241242 | PLASMODIUM VIVAX SAL-1; HOMO SAPIENS | homo sapiens | homo sapiens | plasmodium vivax sal-1 | Chan, L.J., Dietrich, M.H., Tham, W.H. | 3.15 | X-RAY DIFFRACTION | 0.283 | 0.251 | false | true | IGHV3 | IGLV3 | Lambda | null | null | null | null | null |
7n9v | F | null | 0 | G | protein | null | capsid protein | VIRAL PROTEIN/IMMUNE SYSTEM | 06/18/21 | CA-targeting nanobody is a tool for studying HIV-1 capsid lattice interactions | Human immunodeficiency virus 1; Lama glama | lama glama | null | human immunodeficiency virus 1 | Tripler, T.N. | 3.45 | X-RAY DIFFRACTION | 0.258 | 0.212 | false | true | IGHV1 | null | null | null | null | null | null | null |
7p6k | I | null | 0 | F | protein | null | volume-regulated anion channel subunit lrrc8a | MEMBRANE PROTEIN | 07/16/21 | Structure of homomeric LRRC8A Volume-Regulated Anion Channel in complex with synthetic nanobody Sb5 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | synthetic construct | null | mus musculus | Deneka, D., Rutz, S., Sawicka, M. | 3.8 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
3whe | 9 | 0 | 0 | L | protein | null | hemagglutinin | VIRAL PROTEIN/IMMUNE SYSTEM | 08/25/13 | A new conserved neutralizing epitope at the globular head of hemagglutinin in H3N2 influenza viruses | INFLUENZA A VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | influenza a virus | Fujii, Y., Sumida, T., Shirouzu, M., Yokoyama, S. | 4.0 | X-RAY DIFFRACTION | 0.308 | 0.235 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
3etb | F | f | 0 | J | protein | null | anthrax protective antigen | IMMUNE SYSTEM/TOXIN | 10/07/08 | Crystal structure of the engineered neutralizing antibody M18 complexed with anthrax protective antigen domain 4 | MUS MUSCULUS; BACILLUS ANTHRACIS | mus musculus | null | bacillus anthracis | Monzingo, A.F., Leysath, C.E., Barnett, J., Iverson, B.L., Georgiou, G., Robertus, J.D. | 3.8 | X-RAY DIFFRACTION | 0.276 | 0.232 | true | true | unknown | unknown | unknown | 0 | -14.26 | SPR | 25 | 19361425 |
7lud | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 02/22/21 | Crystal structure of Fab ADI-14442 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Rush, S.A., McLellan, J.S. | 2.9 | X-RAY DIFFRACTION | 0.233 | 0.194 | false | true | IGHV1 | IGKV2 | Kappa | null | null | null | null | null |
4ydj | A | B | 0 | I | protein | null | envelope glycoprotein gp160,envelope glycoprotein gp160 | IMMUNE SYSTEM | 02/22/15 | Crystal structure of broadly and potently neutralizing antibody 44-VRC13.01 in complex with HIV-1 clade AE strain 93TH057 gp120 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Zhou, T., Moquin, S., Kwong, P.D. | 2.308 | X-RAY DIFFRACTION | 0.250 | 0.223 | false | true | unknown | IGLV2 | Lambda | null | null | null | null | null |
7tb8 | J | K | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN/Immune System | 12/21/21 | Cryo-EM structure of SARS-CoV-2 spike in complex with antibodies B1-182.1 and A19-61.1 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, T., Tsybovsky, T., Kwong, P.D. | 2.83 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
7pgb | U | V | 0 | W | protein | null | ion transport protein,voltage-gated sodium channel | MEMBRANE PROTEIN | 08/13/21 | NaV_Ae1/Sp1CTD_pore-SAT09 complex | HOMO SAPIENS; ALKALILIMNICOLA EHRLICHII (STRAIN ATCC BAA-1101 / DSM 17681 / MLHE-1); RUEGERIA POMEROYI (STRAIN ATCC 700808 / DSM 15171 / DSS-3) | homo sapiens | homo sapiens | alkalilimnicola ehrlichii (strain atcc baa-1101/ dsm 17681 / mlhe-1), ruegeria pomeroyi (strain atcc 700808 / dsm 15171 / dss-3) | Lolicato, M., Arrigoni, C. | 3.6 | X-RAY DIFFRACTION | 0.232 | 0.207 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
3qeh | E | F | 0 | null | null | null | null | IMMUNE SYSTEM | 01/20/11 | Crystal structure of human N12-i15, an ADCC and non-neutralizing anti-HIV-1 Env antibody | HOMO SAPIENS | homo sapiens | homo sapiens | null | Guan, Y., DeVico, A.L., Lewis, G.K., Pazgier, M. | 2.59 | X-RAY DIFFRACTION | 0.254 | 0.216 | false | false | IGHV1 | IGKV2 | Kappa | null | null | null | null | null |
5c6w | H | h | 0 | null | null | null | null | IMMUNE SYSTEM | 06/23/15 | anti-CXCL13 scFv - E10 | HOMO SAPIENS | homo sapiens | null | null | Tu, C., Bard, J., Mosyak, L. | 1.54 | X-RAY DIFFRACTION | 0.164 | 0.154 | true | true | unknown | unknown | unknown | null | null | null | null | null |
6mui | K | L | 0 | J | protein | null | e2 | VIRUS/IMMUNE SYSTEM | 10/23/18 | CryoEM structure of chimeric Eastern Equine Encephalitis Virus with Fab of EEEV-42 antibody | EASTERN EQUINE ENCEPHALITIS VIRUS; MUS MUSCULUS | mus musculus | mus musculus | eastern equine encephalitis virus | Hasan, S.S., Sun, C., Kim, A.S., Watanabe, Y., Chen, C.L., Klose, T., Buda, G., Crispin, M., Diamond, M.S., Klimstra, W.B., Rossmann, M.G. | 7.7 | ELECTRON MICROSCOPY | null | null | false | false | IGHV9 | IGLV1 | Lambda | null | null | null | null | null |
6ibb | B | null | 0 | A | protein | null | succinate receptor 1 | MEMBRANE PROTEIN | 11/29/18 | Crystal structure of the rat isoform of the succinate receptor SUCNR1 (GPR91) in complex with a nanobody | RATTUS NORVEGICUS; VICUGNA PACOS | vicugna pacos | null | rattus norvegicus | Haffke, M., Jaakola, V.-P. | 2.12 | X-RAY DIFFRACTION | 0.216 | 0.178 | false | true | IGHV1 | null | null | null | null | null | null | null |
2kqn | null | A | 6 | null | null | null | null | IMMUNE SYSTEM | 11/11/09 | Solution structure of the AL-09 H87Y immunoglobulin light chain variable domain | HOMO SAPIENS | null | homo sapiens | null | Volkman, B.F., Peterson, F.C., Ramirez-Alvarado, M., Baden, E.M. | NOT | SOLUTION NMR | null | null | false | true | null | IGKV1 | Kappa | null | null | null | null | null |
6n32 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 11/14/18 | Anti-HIV-1 Fab 2G12 re-refinement | HOMO SAPIENS | homo sapiens | homo sapiens | null | Calarese, D.A., Stanfield, R.L., Wilson, I.A. | 2.2 | X-RAY DIFFRACTION | 0.227 | 0.198 | false | true | unknown | IGKV1 | Kappa | null | null | null | null | null |
2a6k | H | L | 0 | P | peptide | null | dodecapeptide | IMMUNE SYSTEM | 07/03/05 | Crystal Structure Analysis of the germline antibody 36-65 Fab in complex with the dodecapeptide SLGDNLTNHNLR | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | null | Sethi, D.K., Agarwal, A., Manivel, V., Rao, K.V., Salunke, D.M. | 3.0 | X-RAY DIFFRACTION | 0.264 | 0.245 | false | false | IGHV1 | IGKV10 | Kappa | 0 | -9.110123 | Unknown | null | TBD |
6hco | D | C | 0 | B | protein | null | atp-binding cassette sub-family g member 2 | MEMBRANE PROTEIN | 08/15/18 | Cryo-EM structure of the ABCG2 E211Q mutant bound to estrone 3-sulfate and 5D3-Fab | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Manolaridis, I., Jackson, S.M., Taylor, N.M.I., Kowal, J., Stahlberg, H., Locher, K.P. | 3.58 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV13 | Kappa | null | null | null | null | null |
7olz | B | null | 0 | A | protein | null | spike protein s1 | VIRAL PROTEIN | 05/20/21 | Crystal structure of the SARS-CoV-2 RBD with neutralizing-VHHs Re5D06 and Re9F06 | VICUGNA PACOS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | vicugna pacos | null | severe acute respiratory syndrome coronavirus2 | Aksu, M., Guttler, T., Gorlich, D. | 1.75 | X-RAY DIFFRACTION | 0.209 | 0.176 | false | true | IGHV1 | null | null | null | null | null | null | null |
4qhm | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 05/28/14 | I3.1 (unbound) from CH103 Lineage | HOMO SAPIENS | homo sapiens | homo sapiens | null | Fera, D., Harrison, S.C. | 3.23 | X-RAY DIFFRACTION | 0.251 | 0.224 | false | true | IGHV4 | IGLV3 | Lambda | null | null | null | null | null |
7mhz | O | P | 0 | A | protein | null | protein-cysteine n-palmitoyltransferase hhat | TRANSFERASE/IMMUNE SYSTEM | 04/16/21 | Human Hedgehog acyltransferase (HHAT) in complex with a palmitoylated Hedgehog peptide product and a Fab antibody fragment | HOMO SAPIENS; MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | homo sapiens | Long, S.B., Jiang, Y. | 3.2 | ELECTRON MICROSCOPY | null | null | false | true | IGHV9 | IGKV1 | Kappa | null | null | null | null | null |
4r3s | A | B | 0 | Q | peptide | null | merozoite surface protein | IMMUNE SYSTEM | 08/18/14 | Crystal Structure of anti-MSP2 Fv fragment (mAb6D8)in complex with MSP2 11-23 | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | plasmodium falciparum | Morales, R.A.V., MacRaild, C.A., Seow, J., Bankala, K., Drinkwater, N., McGowan, S., Rouet, R., Christ, D., Anders, R.F., Norton, R.S. | 1.7 | X-RAY DIFFRACTION | 0.200 | 0.152 | false | true | IGHV14 | IGKV3 | Kappa | 0 | -11.216609 | Unknown | null | TBD |
1mcj | null | A | 0 | P | peptide | null | peptide n-acetyl-d-phe-l-his-d-pro-nh2 | IMMUNOGLOBULIN | 02/25/93 | PRINCIPLES AND PITFALLS IN DESIGNING SITE DIRECTED PEPTIDE LIGANDS | HOMO SAPIENS | null | homo sapiens | null | Edmundson, A.B., Harris, D.L., Fan, Z.-C., Guddat, L.W. | 2.7 | X-RAY DIFFRACTION | unknown | unknown | false | true | null | IGLV2 | Lambda | null | null | null | null | null |
7rbu | H | L | 0 | B | protein | null | spike protein s1 | VIRAL PROTEIN/IMMUNE SYSTEM | 07/06/21 | SARS-CoV-2 Spike in complex with PVI.V6-14 Fab | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Altomare, C.G., Bajic, G. | 3.7 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
5mv4 | I | J | 0 | K | peptide | null | synthetic peptide containing the citrullinated collagentype ii epitope cii616-639,collagen alpha-1(ii) chain,synthetic peptide containing the citrullinated collagen type ii epitope cii616- 639 | IMMUNE SYSTEM | 01/15/17 | ACC1 Fab fragment in complex with citrullinated CII616-639 epitope of collagen type II (ptm23) | MUS MUSCULUS; SYNTHETIC CONSTRUCT | mus musculus | mus musculus | mus musculus | Dobritzsch, D., Holmdahl, R., Ge, C. | 2.9 | X-RAY DIFFRACTION | 0.247 | 0.232 | false | false | IGHV6 | IGKV3 | Kappa | null | null | null | null | null |
6hx4 | H | L | 0 | B | protein | null | alpha-1-antitrypsin | PROTEIN BINDING | 10/15/18 | Fab fragment of a native monomer-selective antibody in complex with alpha-1-antitrypsin | HOMO SAPIENS; MUS MUSCULUS | mus musculus | mus musculus | homo sapiens | Elliston, E.L.K., Miranda, E., Perez, J., Jagger, A.M., Lomas, D.A., Irving, J.A. | 2.95 | X-RAY DIFFRACTION | 0.277 | 0.231 | false | false | IGHV5 | IGKV3 | Kappa | null | null | null | null | null |
3lrh | null | A | 0 | B | peptide | null | huntingtin | IMMUNE SYSTEM | 02/11/10 | Structure of anti-huntingtin VL domain in complex with huntingtin peptide | HOMO SAPIENS; SYNTHETIC CONSTRUCT | null | homo sapiens | null | Schiefner, A., Chatwell, L., Skerra, A. | 2.6 | X-RAY DIFFRACTION | 0.278 | 0.216 | false | true | null | IGLV1 | Lambda | 0 | -10.022811 | Unknown | null | TBD |
1tji | H | L | 0 | P | peptide | null | envelope glycoprotein gp41 | Viral protein/Immune system | 06/04/04 | Crystal Structure of the broadly neutralizing anti-HIV-1 antibody 2F5 in complex with a gp41 17mer epitope | HOMO SAPIENS; SYNTHETIC CONSTRUCT | homo sapiens | homo sapiens | null | Ofek, G., Tang, M., Sambor, A., Katinger, H., Mascola, J.R., Wyatt, R., Kwong, P.D. | 2.2 | X-RAY DIFFRACTION | 0.221 | 0.183 | false | true | IGHV2 | IGKV1 | Kappa | null | null | null | null | null |
6k2i | A | null | 14 | null | null | null | null | AFB1-BINDING PROTEIN | 05/14/19 | Solution structure of camelid nanobody Nb11 against aflatoxin B1 | VICUGNA PACOS | vicugna pacos | null | null | Nie, Y., Li, S.L., He, T., Zhu, J., Yang, Y.H. | NOT | SOLUTION NMR | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
7wrv | U | V | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN | 01/27/22 | The interface of JMB2002 Fab binds to SARS-CoV-2 Omicron Variant S | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS | mus musculus | mus musculus | severe acute respiratory syndrome coronavirus2 | Yin, W., Xu, Y., Xu, P., Cao, X., Wu, C., Gu, C., He, X., Wang, X., Huang, S., Yuan, Q., Wu, K., Hu, W., Huang, Z., Liu, J., Wang, Z., Jia, F., Xia, K., Liu, P., Wang, X., Song, B., Zheng, J., Jiang, H., Cheng, X., Jiang, Y., Deng, S.J., Xu, H.E. | 2.47 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7cak | I | H | 0 | C | protein | null | spike glycoprotein | VIRAL PROTEIN | 06/08/20 | SARS-CoV-2 S trimer with three RBD in the open state and complexed with three H014 Fab | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhe, L., Cao, L., Deng, Y., Sun, Y., Wang, N., Xie, L., Wang, Y., Rao, Z., Qin, C., Wang, X. | 3.58 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV6 | Kappa | null | null | null | null | null |
4etq | H | L | 0 | C | protein | null | imv membrane protein | IMMUNE SYSTEM/VIRAL PROTEIN | 04/24/12 | Vaccinia virus D8L IMV envelope protein in complex with Fab of murine IgG2a LA5 | MUS MUSCULUS; VACCINIA VIRUS | mus musculus | mus musculus | vaccinia virus | Matho, M.H., Zajonc, D.M. | 2.1 | X-RAY DIFFRACTION | 0.252 | 0.202 | false | true | IGHV1 | IGKV4 | Kappa | 0 | -13.294187 | SPR | null | TBD |
5vm4 | G | null | 0 | null | null | null | null | UNKNOWN FUNCTION | 04/26/17 | The apo form of the triclocarban-binding single domain camelid nanobody VHH T10 | LAMA GLAMA | lama glama | null | null | Tabares-da Rosa, S., Gonzalez-Sapienza, G., Wilson, D.K. | 1.9 | X-RAY DIFFRACTION | 0.241 | 0.197 | false | true | unknown | unknown | unknown | null | null | null | null | null |
1f4x | H | L | 0 | H | Hapten | MGS | 1,2-O-DIMETHYL-4-[2,4-DIHYDROXY-BUTYRAMIDO]-4,6-DIDEOXY-ALPHA-D-MANNOPYRANOSIDE | IMMUNE SYSTEM | 06/10/00 | CRYSTAL STRUCTURE OF AN ANTI-CARBOHYDRATE ANTIBODY DIRECTED AGAINST VIBRIO CHOLERAE O1 IN COMPLEX WITH ANTIGEN | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Alzari, P.M., Souchon, H. | 2.3 | X-RAY DIFFRACTION | 0.250 | 0.185 | false | false | IGHV5 | IGLV1 | Lambda | 0.000003 | -7.62 | Other | null | 10880560 |
3chn | B | M | 4 | null | null | null | null | IMMUNE SYSTEM | 03/10/08 | Solution structure of human secretory IgA1 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Bonner, A., Almogren, A., Furtado, P.B., Kerr, M.A., Perkins, S.J. | NOT | SOLUTION SCATTERING / HOMOLOGY MODEL | null | null | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
1ay1 | H | L | 0 | null | null | null | null | IMMUNOGLOBULIN | 11/13/97 | ANTI TAQ FAB TP7 | MUS MUSCULUS | mus musculus | mus musculus | null | Murali, R., Helmer-Citterich, M., Sharkey, D.J., Scalice, E.R., Daiss, J.L., Sullivan, M.A., Murthy, H.M.K. | 2.2 | X-RAY DIFFRACTION | 0.288 | 0.196 | false | false | IGHV3 | IGKV4 | Kappa | null | null | null | null | null |
7neg | H | L | 0 | E | protein | null | surface glycoprotein | VIRAL PROTEIN/IMMUNE SYSTEM | 02/04/21 | Crystal structure of the N501Y mutant receptor binding domain of SARS-CoV-2 Spike glycoprotein in complex with COVOX-269 Fab | HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2 | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | Zhou, D., Ren, J., Stuart, D. | 2.19 | X-RAY DIFFRACTION | 0.223 | 0.195 | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6c08 | D | E | 0 | F | protein | null | sodium-coupled neutral amino acid transporter 9 | MEMBRANE PROTEIN | 12/28/17 | Zebrafish SLC38A9 with arginine bound in the cytosol open state | DANIO RERIO; MUS MUSCULUS | mus musculus | mus musculus | danio rerio | Lei, H.-T., Gonen, T. | 3.17 | X-RAY DIFFRACTION | 0.286 | 0.267 | false | false | unknown | unknown | unknown | null | null | null | null | null |
6ek2 | H | h | 0 | A | protein | null | cd81 antigen | CELL ADHESION | 09/25/17 | CRYSTAL STRUCTURE OF HUMAN CD81 LARGE EXTRACELLULAR LOOP IN COMPLEX WITH SINGLE CHAIN FV FRAGMENT 10 | HOMO SAPIENS; MUS MUSCULUS | mus musculus | null | homo sapiens | Harris, S.F., Villasenor, A., Kuglstatter, A. | 2.65 | X-RAY DIFFRACTION | 0.247 | 0.179 | true | true | unknown | unknown | unknown | null | null | null | null | null |
7m6i | H | L | 0 | C | B | protein | protein | NA | NA | spike glycoprotein | spike glycoprotein | VIRAL PROTEIN/ANTIVIRAL PROTEIN | 03/25/21 | Structure of the SARS-CoV-2 S 2P trimer in complex with the human neutralizing antibody Fab fragment, BG1-24 | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS | homo sapiens | homo sapiens | severe acute respiratory syndrome coronavirus2 | severe acute respiratory syndrome coronavirus2 | Barnes, C.O., Bjorkman, P.J. | 4 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
6ca9 | D | C | 0 | null | null | null | null | IMMUNE SYSTEM | 01/29/18 | Crystal structure of Fab PCT64_LMCA (SAR), the least mutated common ancestor of the HIV-1 broadly neutralizing antibody lineage PCT64 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Omorodion, O., Wilson, I.A. | 2.702 | X-RAY DIFFRACTION | 0.268 | 0.242 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
6qna | E | F | 0 | null | null | null | null | IMMUNE SYSTEM | 02/10/19 | Structure of bovine anti-RSV hybrid Fab B13HC-B4LC | BOS TAURUS | bos taurus | bos taurus | null | Ren, J., Nettleship, J.E., Harris, G., Mwangi, W., Rhaman, N., Grant, C., Kotecha, A., Fry, E., Charleston, B., Stuart, D.I., Hammond, J., Owens, R.J. | 2.62 | X-RAY DIFFRACTION | 0.250 | 0.220 | false | true | IGHV1 | IGLV1 | Lambda | null | null | null | null | null |
4u05 | A | null | 0 | null | null | null | null | IMMUNE SYSTEM | 07/11/14 | Homodimeric Single Domain Antibody (sdAb) against Staphylococcal enterotoxin B (SEB) S74A Variant | LAMA GLAMA | lama glama | null | null | Legler, P.M. | 2.5 | X-RAY DIFFRACTION | 0.239 | 0.209 | false | true | IGHV1 | null | null | null | null | null | null | null |
6dc7 | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 05/04/18 | Apo Fab structure of mouse monoclonal antibody 8B2 | MUS MUSCULUS | mus musculus | mus musculus | null | Chukwu, J.E., Kong, X.-P. | 1.901 | X-RAY DIFFRACTION | 0.235 | 0.183 | false | false | IGHV1 | IGKV1 | Kappa | null | null | null | null | null |
7lyv | A | B | 0 | null | null | null | null | IMMUNE SYSTEM | 03/08/21 | Crystal structure of the HCMV pentamer-specific antibody 1-103 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Wrapp, D., Jones, H.G., McLellan, J.S. | 1.9 | X-RAY DIFFRACTION | 0.217 | 0.191 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
7luc | H | I | 0 | B | protein | null | fusion glycoprotein f0 | IMMUNE SYSTEM/VIRAL PROTEIN | 02/22/21 | Cryo-EM structure of RSV preF bound by Fabs 32.4K and 01.4B | RESPIRATORY SYNCYTIAL VIRUS; HOMO SAPIENS | homo sapiens | homo sapiens | respiratory syncytial virus | Wrapp, D., McLellan, J.S. | 3.21 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV2 | Kappa | null | null | null | null | null |
3k1k | C | null | 0 | A | protein | null | green fluorescent protein | LUMINESCENT PROTEIN/IMMUNE SYSTEM | 09/28/09 | Green fluorescent protein bound to minimizer nanobody | AEQUOREA VICTORIA; CAMELUS DROMEDARIUS | lama pacos | null | aequorea victoria | Kirchhofer, A., Helma, J., Schmidthals, K., Frauer, C., Cui, S., Karcher, A., Pellis, M., Muyldermans, S., Delucci, C.C., Cardoso, M.C., Leonhardt, H., Hopfner, K.-P., Rothbauer, U. | 2.15 | X-RAY DIFFRACTION | 0.255 | 0.212 | false | true | IGHV1 | null | null | null | null | null | null | null |
6osy | 5 | 6 | 0 | 2 | protein | null | bg505 gp120 | IMMUNE SYSTEM | 05/02/19 | Cryo-EM structure of vaccine-elicited antibody 0PV-a.01 in complex with HIV-1 Env BG505 DS-SOSIP and antibodies VRC03 and PGT122 | HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Gorman, J., Kwong, P.D. | 4.3 | ELECTRON MICROSCOPY | null | null | false | true | IGHV4 | unknown | unknown | null | null | null | null | null |
7lex | F | H | 0 | C | protein | null | arginase-1 | HYDROLASE/IMMUNE SYSTEM | 01/15/21 | Trimeric human Arginase 1 in complex with mAb1 - 2 hArg:3 mAb1 complex | HOMO SAPIENS | homo sapiens | homo sapiens | homo sapiens | Gomez-Llorente, Y., Scapin, G., Palte, R.L. | 3.6 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | IGKV3 | Kappa | null | null | null | null | null |
7z1c | D | null | 0 | C | protein | null | spike protein s1 | ANTIVIRAL PROTEIN | 02/24/22 | Nanobody H11-B5 and H11-F2 bound to RBD | SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; LAMA GLAMA | lama glama | null | severe acute respiratory syndrome coronavirus2 | Mikolajek, H., Naismith, J.H. | 1.9 | X-RAY DIFFRACTION | 0.199 | 0.175 | false | true | IGHV1 | null | null | null | null | null | null | null |
7php | K | null | 0 | null | null | null | null | MEMBRANE PROTEIN | 08/18/21 | Structure of Multidrug and Toxin Compound Extrusion (MATE) transporter NorM by NabFab-fiducial assisted cryo-EM | VIBRIO CHOLERAE RC385; SYNTHETIC CONSTRUCT; LAMA GLAMA | lama glama | null | null | Bloch, J.S., Mukherjee, S., Kowal, J., Niederer, M., Pardon, E., Steyaert, J., Kossiakoff, A.A., Locher, K.P. | 3.47 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
4yue | H | L | 0 | C | protein | null | interleukin-2 | CYTOKINE/IMMUNE SYSTEM | 03/18/15 | Mouse IL-2 Bound to S4B6 Fab Fragment | MUS MUSCULUS | mus musculus | mus musculus | mus musculus | Spangler, J.B., Jude, K.M., Garcia, K.C. | 2.194 | X-RAY DIFFRACTION | 0.231 | 0.203 | false | true | IGHV1 | IGKV12 | Kappa | null | null | null | null | null |
6n1v | Y | a | 0 | B | protein | null | envelope glycoprotein gp120 | VIRAL PROTEIN | 11/12/18 | Cryo-EM structure at 4.0 A resolution of vaccine-elicited antibody A12V163-a.01 in complex with HIV-1 Env BG505 DS-SOSIP, and antibodies VRC03 and PGT122 | MACACA MULATTA; HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS | homo sapiens | homo sapiens | human immunodeficiency virus 1 | Acharya, P., Kwong, P.D. | 4 | ELECTRON MICROSCOPY | null | null | false | true | unknown | unknown | unknown | null | null | null | null | null |
6pwc | H | L | 0 | A | R | protein | protein | NA | NA | beta-arrestin-1 | neurotensin receptor type 1 | SIGNALING PROTEIN | 07/22/19 | A complex structure of arrestin-2 bound to neurotensin receptor 1 | HOMO SAPIENS; SYNTHETIC CONSTRUCT; SYNTHETIC CONSTRUCT | synthetic construct | synthetic construct | homo sapiens | homo sapiens | Yin, W., Li, Z., Jin, M., Yin, Y.-L., de Waal, P.W., Pal, K., Gao, X., He, Y., Gao, J., Wang, X., Zhang, Y., Zhou, H., Melcher, K., Jiang, Y., Cong, Y., Zhou, X.E., Yu, X., Xu, H.E. | 4.9 | ELECTRON MICROSCOPY | null | null | false | true | IGHV3 | IGKV1 | Kappa | null | null | null | null | null |
6iyn | A | null | 11 | null | null | null | null | AFLATOXIN B1-BINDING PROTEIN | 12/17/18 | Solution structure of camelid nanobody Nb26 against aflatoxin B1 | VICUGNA PACOS | vicugna pacos | null | null | Nie, Y., He, T., Zhu, J., Li, S.L., Hu, R., Yang, Y.H. | NOT | SOLUTION NMR | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
4f2m | C | D | 0 | F | protein | null | spike protein | VIRAL PROTEIN/IMMUNE SYSTEM | 05/08/12 | Crystal structure of a TGEV coronavirus Spike fragment in complex with the TGEV neutralizing monoclonal antibody 1AF10 | TGEV VIRULENT PURDUE; MUS MUSCULUS | mus musculus | mus musculus | tgev virulent purdue | Reguera, J., Santiago, C., Mudgal, G., Ordono, D., Enjuanes, L., Casasnovas, J.M. | 3.0 | X-RAY DIFFRACTION | 0.251 | 0.216 | false | true | IGHV1 | IGKV5 | Kappa | null | null | null | null | null |
7n3g | H | L | 0 | null | null | null | null | IMMUNE SYSTEM | 06/01/21 | Crystal structure of an anti-SARS-CoV-2 human neutralizing antibody Fab fragment C098 | HOMO SAPIENS | homo sapiens | homo sapiens | null | Flyak, A.I., Bjorkman, P.J., Barnes, C.O. | 1.42 | X-RAY DIFFRACTION | 0.205 | 0.186 | false | true | IGHV3 | IGKV3 | Kappa | null | null | null | null | null |
6qfa | K | null | 0 | B | protein | null | gamma-aminobutyric acid receptor subunit beta-3,gamma-aminobutyric acid receptor subunit beta-3 | MEMBRANE PROTEIN | 01/09/19 | CryoEM structure of a beta3K279T GABA(A)R homomer in complex with histamine and megabody Mb25 | HOMO SAPIENS; HELICOBACTER PYLORI (STRAIN G27); LAMA GLAMA | helicobacter pylori (strain g27), lama glama | null | homo sapiens | Uchanski, T., Masiulis, S., Fischer, B., Kalichuk, V., Wohlkoening, A., Zoegg, T., Remaut, H., Vranken, W., Aricescu, A.R., Pardon, E., Steyaert, J. | 2.49 | ELECTRON MICROSCOPY | null | null | false | true | IGHV1 | null | null | null | null | null | null | null |
6c6x | E | F | 0 | null | null | null | null | IMMUNE SYSTEM | 01/19/18 | Crystal structure of Middle-East Respiratory Syndrome (MERS) coronavirus neutralizing antibody JC57-14 isolated from a vaccinated rhesus macaque. | MACACA MULATTA | macaca mulatta | macaca mulatta | null | Joyce, M.G., Mascola, J.R., Graham, B.S., Kwong, P.D. | 1.99 | X-RAY DIFFRACTION | 0.208 | 0.176 | false | true | IGHV4 | IGKV1 | Kappa | null | null | null | null | null |
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