pdb
stringlengths
4
4
Hchain
stringclasses
59 values
Lchain
stringclasses
60 values
model
int64
0
76
antigen_chain
stringclasses
386 values
antigen_type
stringclasses
24 values
antigen_het_name
stringclasses
240 values
antigen_name
stringlengths
1
396
short_header
stringclasses
448 values
date
stringlengths
8
8
compound
stringlengths
4
243
organism
stringlengths
3
175
heavy_species
stringclasses
121 values
light_species
stringclasses
67 values
antigen_species
stringclasses
937 values
authors
stringlengths
6
762
resolution
stringlengths
1
8
method
stringclasses
10 values
r_free
stringclasses
354 values
r_factor
stringclasses
342 values
scfv
bool
2 classes
engineered
bool
2 classes
heavy_subclass
stringclasses
14 values
light_subclass
stringclasses
35 values
light_ctype
stringclasses
3 values
affinity
float64
0
0
delta_g
float64
-16.91
-5.04
affinity_method
stringclasses
11 values
temperature
float64
4
37
pmid
stringclasses
157 values
4lvh
K
L
0
J
protein
null
hemagglutinin
IMMUNE SYSTEM
07/26/13
Insight into highly conserved H1 subtype-specific epitopes in influenza virus hemagglutinin
INFLUENZA A VIRUS; MUS MUSCULUS
mus musculus
mus musculus
influenza a virus
Kim, K.H., Cho, K.J., Kim, S., Seok, J.H., Lee, J.-H.
2.8
X-RAY DIFFRACTION
0.274
0.232
false
false
IGHV5
IGKV3
Kappa
null
null
null
null
null
6k7o
F
G
0
R
protein
null
leukocyte immunoglobulin-like receptor subfamily b member4
IMMUNE SYSTEM
06/08/19
Complex structure of LILRB4 and h128-3 antibody
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Song, H., Chai, Y., Xu, X., Gao, F.G.
3.004
X-RAY DIFFRACTION
0.270
0.228
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
6bf4
H
L
0
G
protein
null
hiv-1 clade ae gp120 core
viral protein/immune system
10/25/17
Crystal Structure of HIV-1 Clade AE Strain CNE55 gp120 Core in Complex with Neutralizing Antibody VRC-PG05 that Targets the Center of the Silent Face on the Outer Domain of gp120
HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS
homo sapiens
homo sapiens
human immunodeficiency virus 1
Zhou, T., Kwong, P.D.
2.382
X-RAY DIFFRACTION
0.228
0.192
false
true
IGHV3
IGKV4
Kappa
0
-9.208075
SPR
null
TBD
7e33
E
e
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
SIGNALING PROTEIN
02/07/21
Serotonin 1E (5-HT1E) receptor-Gi protein complex
HOMO SAPIENS; MUS MUSCULUS; ESCHERICHIA COLI
mus musculus
null
homo sapiens | homo sapiens
Xu, P., Huang, S., Zhang, H., Mao, C., Zhou, X.E., Shen, D.D., Jiang, Y., Zhang, Y., Xu, H.E.
2.9
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
7tn0
C
D
0
S
protein
null
spike protein s1
VIRAL PROTEIN/IMMUNE SYSTEM
01/20/22
SARS-CoV-2 Omicron RBD in complex with human ACE2 and S304 Fab and S309 Fab
HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Snell, G., McCallum, M., Veesler, D., Nix, J.C., Croll, T.I., Dillen, J.R., Czudnochowski, N.
2.85
X-RAY DIFFRACTION
0.268
0.230
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
6hjp
I
J
0
D | C
protein | protein
NA | NA
hemagglutinin | hemagglutinin
VIRAL PROTEIN
09/04/18
Structure of Influenza Hemagglutinin ectodomain (A/duck/Alberta/35/76) in complex with FISW84 Fab Fragment
HOMO SAPIENS; INFLUENZA A VIRUS (STRAIN A/DUCK/ALBERTA/35/1976 H1N1)
homo sapiens
homo sapiens
influenza a virus (straina/duck/alberta/35/1976 h1n1) | influenza a virus (straina/duck/alberta/35/1976 h1n1)
Benton, D.J., Rosenthal, P.B.
3.3
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
5tz2
H
L
0
C
protein
null
leukocyte surface antigen cd47
IMMUNE SYSTEM
11/21/16
Crystal structure of human CD47 ECD bound to Fab of C47B222
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Cardoso, R.M.F.
2.302
X-RAY DIFFRACTION
0.255
0.201
false
true
IGHV5
IGKV3
Kappa
0
-12.211051
SPR
null
TBD
6ieq
D
E
0
B
protein
null
envelope glycoprotein gp160
VIRAL PROTEIN
09/16/18
Crystal Structure of HIV-1 Env ConM SOSIP.v7 in Complex with bNAb PGT124 and 35O22
HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS
homo sapiens
homo sapiens
human immunodeficiency virus 1
Han, B.W., Wilson, I.A.
3.9
X-RAY DIFFRACTION
0.296
0.247
false
true
unknown
unknown
unknown
null
null
null
null
null
6hjp
K
L
0
F | E
protein | protein
NA | NA
hemagglutinin | hemagglutinin
VIRAL PROTEIN
09/04/18
Structure of Influenza Hemagglutinin ectodomain (A/duck/Alberta/35/76) in complex with FISW84 Fab Fragment
HOMO SAPIENS; INFLUENZA A VIRUS (STRAIN A/DUCK/ALBERTA/35/1976 H1N1)
homo sapiens
homo sapiens
influenza a virus (straina/duck/alberta/35/1976 h1n1) | influenza a virus (straina/duck/alberta/35/1976 h1n1)
Benton, D.J., Rosenthal, P.B.
3.3
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
2esg
B
M
0
null
null
null
null
IMMUNE SYSTEM/TRANSPORT PROTEIN
10/26/05
Solution structure of the complex between immunoglobulin IgA1 and human serum albumin
HOMO SAPIENS
homo sapiens
homo sapiens
null
Almogren, A., Furtado, P.B., Sun, Z., Perkins, S.J., Kerr, M.A.
NOT
SOLUTION SCATTERING
null
null
false
false
IGHV1
IGKV1
Kappa
null
null
null
null
null
2kh2
B
b
68
A
protein
null
interleukin-1 beta
Cytokine/IMMUNE SYSTEM
03/23/09
Solution structure of a scFv-IL-1B complex
HOMO SAPIENS; MUS MUSCULUS
mus musculus
null
homo sapiens
Wilkinson, I.C., Hall, C.J., Veverka, V., Muskett, F.W., Stephens, P.E., Taylor, R.J., Henry, A.J., Carr, M.D.
NOT
SOLUTION NMR
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
3whe
M
N
0
A
protein
null
hemagglutinin
VIRAL PROTEIN/IMMUNE SYSTEM
08/25/13
A new conserved neutralizing epitope at the globular head of hemagglutinin in H3N2 influenza viruses
INFLUENZA A VIRUS; HOMO SAPIENS
homo sapiens
homo sapiens
influenza a virus
Fujii, Y., Sumida, T., Shirouzu, M., Yokoyama, S.
4.0
X-RAY DIFFRACTION
0.308
0.235
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
6muf
H
L
0
G
protein
null
envelope glycoprotein gp160
IMMUNE SYSTEM/INHIBITOR
10/23/18
Crystal Structure of HIV-1 B41 SOSIP.664 Prefusion Env Trimer in Complex with Human Antibodies 3H109L and 35O22 at 3.4 Angstrom
HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS
homo sapiens
homo sapiens
human immunodeficiency virus 1
Lai, Y.-T., Kwong, P.D.
2.91
X-RAY DIFFRACTION
0.297
0.253
false
true
IGHV4
unknown
unknown
null
null
null
null
null
7d5z
P
O
0
M
protein
null
envelope glycoprotein h
VIRAL PROTEIN
09/28/20
Crystal structure of EBV gH/gL bound with neutralizing antibody 1D8
HUMAN GAMMAHERPESVIRUS 4; HOMO SAPIENS
homo sapiens
homo sapiens
human gammaherpesvirus 4
Zhu, Q., Shan, S., Yu, J., Wang, X., Zhang, L., Zeng, M.
4.2
X-RAY DIFFRACTION
0.277
0.246
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
3mac
H
L
0
A
protein
null
transmembrane glycoprotein
IMMUNE SYSTEM
03/23/10
crystal structure of GP41-derived protein complexed with fab 8062
HUMAN IMMUNODEFICIENCY VIRUS 1; HOMO SAPIENS
homo sapiens
homo sapiens
human immunodeficiency virus 1
Li, M., Gustchina, E., Louis, J., Gustchina, A., Wlodawer, A., Clore, M.
2.5
X-RAY DIFFRACTION
0.264
0.200
false
true
IGHV1
IGLV3
Lambda
0
-9.23
ITC
28
21085615
5yoy
P
M
0
K
protein
null
tumor necrosis factor
IMMUNE SYSTEM
10/31/17
Crystal structure of the human tumor necrosis factor in complex with golimumab Fv
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Ono, M., Horita, S., Sato, Y., Nomura, Y., Iwata, S., Nomura, N.
2.727
X-RAY DIFFRACTION
0.234
0.190
false
true
IGHV3
IGKV3
Kappa
0
-14.658431
Unknown
null
TBD
6qcu
H
L
0
null
null
null
null
IMMUNE SYSTEM
12/31/18
Crystal structure of a Fab portion of the anti EBOV 3T0331 antibody
HOMO SAPIENS
homo sapiens
homo sapiens
null
Diskin, R., Cohen-Dvashi, H.
1.56
X-RAY DIFFRACTION
0.203
0.176
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
6nfj
B
null
0
A
protein
null
beta-klotho
SIGNALING PROTEIN
12/20/18
Structure of Beta-Klotho in Complex with FGF19 C-terminal peptide
HOMO SAPIENS; LAMA GLAMA; SYNTHETIC CONSTRUCT
lama glama
null
homo sapiens
Kuzina, E., Schlessinger, J., Lee, S.
3.19
X-RAY DIFFRACTION
0.320
0.280
false
true
IGHV1
null
null
null
null
null
null
null
7so7
H
L
0
A
protein
null
toxin b
TOXIN/IMMUNE SYSTEM
10/29/21
Novel structural insights for a pair of monoclonal antibodies recognizing non-overlapping epitopes of the glucosyltransferase domain of Clostridium difficile toxin B
CLOSTRIDIOIDES DIFFICILE; HOMO SAPIENS
homo sapiens
homo sapiens
clostridioides difficile
Liu, J.
3.59
X-RAY DIFFRACTION
0.258
0.209
false
true
IGHV3
IGLV5
Lambda
null
null
null
null
null
5w9k
H
I
0
G
protein
null
spike glycoprotein
VIRAL PROTEIN
06/23/17
MERS S ectodomain trimer in complex with variable domain of neutralizing antibody G4
MIDDLE EAST RESPIRATORY SYNDROME-RELATED CORONAVIRUS; MUS MUSCULUS
mus musculus
mus musculus
middle east respiratory syndrome-relatedcoronavirus
Pallesen, J., Ward, A.B.
4.6
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
4evn
I
J
0
null
null
null
null
immune system
04/26/12
Crystal Structure of Fab CR6261 (somatic heavy chain with germline-reverted light chain)
HOMO SAPIENS
homo sapiens
homo sapiens
null
Whittle, J.R.R.
2.851
X-RAY DIFFRACTION
0.293
0.230
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
5wob
U
V
0
G
protein
null
insulin
HYDROLASE
08/01/17
Crystal Structure Analysis of Fab1-Bound Human Insulin Degrading Enzyme (IDE) in Complex with Insulin
HOMO SAPIENS; MUS MUSCULOIDES
mus musculoides
mus musculoides
homo sapiens
McCord, L.A., Liang, W.G., Farcasanu, M., Wang, A.G., Koide, S., Tang, W.J.
3.95
X-RAY DIFFRACTION
0.291
0.243
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
3h42
H
L
0
B | A
protein | protein
NA | NA
proprotein convertase subtilisin/kexin type 9 | proprotein convertase subtilisin/kexin type 9
HYDROLASE/IMMUNE SYSTEM
04/17/09
Crystal structure of PCSK9 in complex with Fab from LDLR competitive antibody
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens | homo sapiens
Piper, D.E., Walker, N.P.C., Romanow, W.G., Thibault, S.T., Tsai, M.M., Yang, E.
2.3
X-RAY DIFFRACTION
0.209
0.191
false
true
IGHV3
IGLV1
Lambda
0
-15.54
Other
25
19443683
6ot0
H
L
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
SIGNALING PROTEIN
05/02/19
Structure of human Smoothened-Gi complex
HOMO SAPIENS; MUS MUSCULUS
mus musculus
mus musculus
homo sapiens | homo sapiens
Qi, X., Li, X.
3.9
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
1f2x
L
null
0
null
null
null
null
IMMUNE SYSTEM
05/30/00
STRUCTURE OF THE SINGLE-DOMAIN CAMELID ANTIBODY CAB-CA05
CAMELUS DROMEDARIUS
camelus dromedarius
null
null
Decanniere, K., Muyldermans, S., Wyns, L.
2.1
X-RAY DIFFRACTION
0.270
0.190
false
true
IGHV1
null
null
null
null
null
null
null
2exw
C
D
0
A
protein
null
h(+)/cl(-) exchange transporter clca
MEMBRANE PROTEIN
11/09/05
Crystal structure of a EcClC-Fab complex in the absence of bound ions
ESCHERICHIA COLI; MUS MUSCULUS
mus musculus
mus musculus
escherichia coli
Lobet, S., Dutzler, R.
3.2
X-RAY DIFFRACTION
0.314
0.268
false
false
IGHV4
IGKV4
Kappa
null
null
null
null
null
4rrp
L
F
0
R
protein
null
antigen asf1p
IMMUNE SYSTEM
11/06/14
Crystal Structure of the Fab complexed with antigen Asf1p, Northeast Structural Genomics Consortium (NESG) Target PdR16
HOMO SAPIENS; SACCHAROMYCES CEREVISIAE
homo sapiens
homo sapiens
saccharomyces cerevisiae
Kuzin, A., Lew, S., Seetharaman, J., Mao, L., Xiao, R., Oconnell, P.T., Maglaqui, M., Bailey, L., Everett, J.K., Acton, T.B., Montelione, G.T., Hunt, J.F., Tong, L., Chaperone-Enabled Studies of Epigenetic Regulation Enzymes (CEBS), Northeast Structural Genomics Consortium (NESG)
2.79
X-RAY DIFFRACTION
0.253
0.183
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
4ptt
B
A
0
null
null
null
null
IMMUNE SYSTEM
03/11/14
Crystal Structure of anti-23F strep Fab C05
HOMO SAPIENS
homo sapiens
homo sapiens
null
Bryson, S., Risnes, L., Damgupta, S., Thomson, C.A., Smith, K., Schrader, J.W., Pai, E.F.
1.8
X-RAY DIFFRACTION
0.196
0.171
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
6x8q
H
L
0
P
peptide
null
papp peptide
IMMUNE SYSTEM
06/01/20
Crystal structure of 3D11 Fab in complex with Plasmodium berghei circumsporozoite protein PAPP peptide
MUS MUSCULUS; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
plasmodium berghei anka
Thai, E., Julien, J.P.
1.6
X-RAY DIFFRACTION
0.188
0.159
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
3s36
H
L
0
X
protein
null
vascular endothelial growth factor receptor 2
IMMUNE SYSTEM/Transferase
05/17/11
Structural basis for the function of two anti-VEGF receptor antibodies
MUS MUSCULUS, HOMO SAPIENS; HOMO SAPIENS
mus musculus, homo sapiens
mus musculus, homo sapiens
homo sapiens
Franklin, M.C.
3.2
X-RAY DIFFRACTION
0.332
0.274
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
3r06
D
C
0
null
null
null
null
IMMUNE SYSTEM
03/07/11
Crystal structure of anti-mouse CD3epsilon antibody 2C11 Fab fragment
CRICETULUS MIGRATORIUS
cricetulus migratorius
cricetulus migratorius
null
Shore, D.A., Zhu, X., Wilson, I.A.
2.5
X-RAY DIFFRACTION
0.236
0.191
false
true
IGHV5
IGKV14
Kappa
null
null
null
null
null
1hez
D
C
0
E
protein
null
protein l
ANTIBODY
11/27/00
antibody-antigen complex
HOMO SAPIENS; FINEGOLDIA MAGNA
homo sapiens
homo sapiens
finegoldia magna
Graille, M., Stura, E.A., Housden, N.G., Bottomley, S.P., Taussig, M.J., Sutton, B.J., Gore, M.G., Charbonnier, JB.
2.7
X-RAY DIFFRACTION
0.278
0.215
false
false
IGHV3
IGKV1
Kappa
0
-9.32
Other
25
11587642
1nj9
H
L
0
null
null
null
null
IMMUNE SYSTEM
12/30/02
Cocaine hydrolytic antibody 15A10
MUS MUSCULUS
mus musculus
mus musculus
null
Larsen, N.A., de Prada, P., Deng, S.X., Zhu, X., Landry, D.W., Wilson, I.A.
2.35
X-RAY DIFFRACTION
0.283
0.199
false
false
IGHV1
IGLV1
Lambda
null
null
null
null
null
6pt0
E
e
0
A | C | B
protein | protein | protein
NA | NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(o) subunitgamma-2 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
07/14/19
Cryo-EM structure of human cannabinoid receptor 2-Gi protein in complex with agonist WIN 55,212-2
HOMO SAPIENS; SYNTHETIC CONSTRUCT
synthetic construct
null
homo sapiens | homo sapiens | homo sapiens
Xu, T.H., Xing, C., Zhuang, Y., Feng, Z., Zhou, X.E., Chen, M., Wang, L., Meng, X., Xue, Y., Wang, J., Liu, H., McGuire, T., Zhao, G., Melcher, K., Zhang, C., Xu, H.E., Xie, X.Q.
3.2
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
7epx
H
L
0
A
protein
null
spike glycoprotein
VIRAL PROTEIN
04/28/21
S protein of SARS-CoV-2 in complex with GW01
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Shen, Y.P., Zhang, Y.Y., Yan, R.H., Li, Y.N., Zhou, Q.
3
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV1
Lambda
null
null
null
null
null
7l5j
Y
X
0
A
protein
null
capsid protein
VIRAL PROTEIN/IMMUNE SYSTEM
12/22/20
Mouse Norovirus Protruding domain complexed with neutralizing Fab fragment from mAb A6.2
MURINE NOROVIRUS 1; MUS MUSCULUS
mus musculus
mus musculus
murine norovirus 1
Smith, T.J., Sherman, M.B.
3.2
ELECTRON MICROSCOPY
null
null
false
false
IGHV4
IGKV4
Kappa
null
null
null
null
null
6azx
C
D
0
null
null
null
null
IMMUNE SYSTEM
09/13/17
Crystal structure of the neutralizing anti-circumsporozoite protein 663 antibody
HOMO SAPIENS
homo sapiens
homo sapiens
null
Scally, S.W., Bosch, A., Triller, G., Wardemann, H., Julien, J.P.
2.1
X-RAY DIFFRACTION
0.238
0.206
false
true
IGHV3
IGKV2
Kappa
null
null
null
null
null
4jha
H
L
0
null
null
null
null
IMMUNE SYSTEM
03/04/13
Crystal Structure of RSV-Neutralizing Human Antibody D25
HOMO SAPIENS
homo sapiens
homo sapiens
null
Mclellan, J.S., Chen, M., Leung, S., Graepel, K.W., Du, X., Yang, Y., Zhou, T., Baxa, U., Yasuda, E., Beaumont, T., Kumar, A., Modjarrad, K., Zheng, Z., Zhao, M., Xia, N., Kwong, P.D., Graham, B.S.
1.6
X-RAY DIFFRACTION
0.255
0.240
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
7jln
H
L
0
null
null
null
null
IMMUNE SYSTEM
07/30/20
Crystal structure of glVRC01 Fab in complex with anti-idiotype iv9 Fab
MUS MUSCULUS; HOMO SAPIENS
homo sapiens
homo sapiens
null
Weidle, C., Pancera, M.
2.57
X-RAY DIFFRACTION
0.256
0.197
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
4fqh
H
L
0
null
null
null
null
IMMUNE SYSTEM
06/25/12
Crystal Structure of Fab CR9114
HOMO SAPIENS
homo sapiens
homo sapiens
null
Dreyfus, C., Wilson, I.A.
2.05
X-RAY DIFFRACTION
0.249
0.200
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
6qpg
M
null
0
A | B
protein | protein
NA | NA
polymerase acidic protein | rna-directed rna polymerase catalytic subunit
RNA BINDING PROTEIN
02/13/19
Influenza A virus Polymerase Heterotrimer A/nt/60/1968(H3N2) in complex with Nanobody NB8205
INFLUENZA A VIRUS (STRAIN A/NORTHERN TERRITORY/60/1968 H3N2); CAMELIDAE
camelidae
null
influenza a virus (strain a/northernterritory/60/1968 h3n2) | influenza a virus (strain a/northernterritory/60/1968 h3n2)
Fan, H.T., Keown, J.R., Fodor, E., Grimes, J.M.
3.34
X-RAY DIFFRACTION
0.305
0.251
false
true
IGHV3
null
null
null
null
null
null
null
7wic
S
s
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
STRUCTURAL PROTEIN
01/03/22
Cryo-EM structure of the SS-14-bound human SSTR2-Gi1 complex
HOMO SAPIENS; RATTUS NORVEGICUS; BOS TAURUS; SYNTHETIC CONSTRUCT; SYNTHETIC CONSTRUCT
synthetic construct
null
homo sapiens | rattus norvegicus
Chen, L., Wang, W., Dong, Y., Shen, D., Guo, J., Qin, J., Zhang, H., Shen, Q., Zhang, Y., Mao, C.
2.8
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
7cw3
q
r
0
F | E
protein | protein
NA | NA
e2 glycoprotein | e1 glycoprotein
VIRUS/IMMUNE SYSTEM
08/27/20
Cryo-EM structure of Chikungunya virus in complex with mAb CHK-263 IgG (subregion around icosahedral 2-fold vertex)
CHIKUNGUNYA VIRUS; MUS MUSCULUS
mus musculus
mus musculus
chikungunya virus | chikungunya virus
Zhou, Q.F., Fox, J.M., Earnest, J.T., Ng, T.S., Kim, A.S., Fibriansah, G., Kostyuchenko, V.A., Shu, B., Diamond, M.S., Lok, S.M.
9.4
ELECTRON MICROSCOPY
null
null
false
false
IGHV1
IGKV5
Kappa
null
null
null
null
null
7kgu
F
E
0
null
null
null
null
IMMUNE SYSTEM
10/18/20
Structure of 2Q1-Fab, an antibody selective for IDH2R140Q-HLA-B*07:02
HOMO SAPIENS
homo sapiens
homo sapiens
null
Miller, M.S., Aytenfisu, T.Y., Wright, K.M., Gabelli, S.B.
2.4
X-RAY DIFFRACTION
0.269
0.208
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7a3o
H
L
0
A
protein
null
core protein
VIRAL PROTEIN
08/18/20
Crystal structure of dengue 1 virus envelope glycoprotein in complex with the scFv fragment of the broadly neutralizing human antibody EDE1 C10
DENGUE VIRUS 1; HOMO SAPIENS
homo sapiens
homo sapiens
dengue virus 1
Sharma, A., Vaney, M.C., Guardado-Calvo, P., Duquerroy, S., Rouvinski, A., Rey, F.A.
2.8
X-RAY DIFFRACTION
0.268
0.218
false
true
IGHV1
IGLV2
Lambda
null
null
null
null
null
1jgl
H
L
0
L
Hapten
EST
ESTRADIOL
IMMUNE SYSTEM
06/26/01
Crystal structure of immunoglobulin Fab fragment complexed with 17-beta-estradiol
MUS MUSCULUS
mus musculus
mus musculus
mus musculus
Lamminmaki, U., Kankare, J.A.
2.15
X-RAY DIFFRACTION
0.249
0.199
false
true
IGHV9
IGKV12
Kappa
0
-11.867518
Unknown
null
TBD
3u9p
H
L
0
D
protein
null
neutrophil gelatinase-associated lipocalin
IMMUNE SYSTEM
10/19/11
Crystal Structure of Murine Siderocalin in Complex with an Fab Fragment
MUS MUSCULUS; RATTUS NORVEGICUS
rattus norvegicus
rattus norvegicus
mus musculus
Correnti, C., Strong, R.K.
2.8
X-RAY DIFFRACTION
0.292
0.219
false
true
IGHV2
IGKV19
Kappa
null
null
null
null
null
3mlr
H
L
0
P
peptide
null
hiv-1 gp120 third variable region (v3) crown
IMMUNE SYSTEM
04/18/10
Crystal structure of anti-HIV-1 V3 Fab 2557 in complex with a NY5 V3 peptide
HUMAN IMMUNODEFICIENCY VIRUS TYPE 1; HOMO SAPIENS
homo sapiens
homo sapiens
human immunodeficiency virus type 1
Kong, X.-P.
1.8
X-RAY DIFFRACTION
0.216
0.181
false
false
IGHV5
IGLV3
Lambda
null
null
null
null
null
5mvj
E
F
0
null
null
null
null
IMMUNE SYSTEM
01/16/17
Structure of DC8E8 Fab at pH 6.5 crystallized in space-group P1
MUS MUSCULUS
mus musculus
mus musculus
null
Skrabana, R., Novak, M., Cehlar, O., Kontsekova, E.
2.5
X-RAY DIFFRACTION
0.272
0.219
false
false
IGHV1
IGKV8
Kappa
null
null
null
null
null
5eoc
J
M
0
Q
peptide
null
ala-cys-gln-leu-ile-asn-thr-asn-gly-ser-trp-his-ile-cys
IMMUNE SYSTEM
11/10/15
Crystal structure of Fab C2 in complex with a Cyclic variant of Hepatitis C Virus E2 epitope I
MUS MUSCULUS; SYNTHETIC CONSTRUCT
mus musculus
mus musculus
hepatitis c virus
Berisio, R., Ruggiero, A., Sandomenico, A., Patel, A.H., Ruvo, M., Vitagliano, L.
1.98
X-RAY DIFFRACTION
0.266
0.234
false
false
IGHV1
IGKV3
Kappa
0
-10.257147
Unknown
null
TBD
6icc
H
L
0
A
protein
null
pdz tandem fragment with pa tag
SIGNALING PROTEIN
09/05/18
The NZ-1 Fab complexed with the PDZ tandem fragment of A. aeolicus S2P homolog with the PA12 tag inserted between the residues 181 and 186
AQUIFEX AEOLICUS VF5; RATTUS NORVEGICUS
rattus norvegicus
rattus norvegicus
aquifex aeolicus vf5
Tamura, R., Oi, R., Kaneko, M.K., Kato, Y., Nogi, T.
2.0
X-RAY DIFFRACTION
0.260
0.213
false
true
IGHV5
IGLV3
Lambda
null
null
null
null
null
6e4x
Z
Y
0
B
protein
null
hemagglutinin
VIRAL PROTEIN/IMMUNE SYSTEM
07/18/18
Human antibody S5V2-29 in complex with influenza hemagglutinin A/Texas/50/2012 (H3N2)
INFLUENZA A VIRUS (A/TEXAS/50/2012(H3N2)); HOMO SAPIENS
homo sapiens
homo sapiens
influenza a virus (a/texas/50/2012(h3n2))
McCarthy, K.R., Harrison, S.C.
2.25
X-RAY DIFFRACTION
0.225
0.203
false
true
IGHV4
IGKV1
Kappa
null
null
null
null
null
5ujz
I
i
0
E
protein
null
hemagglutinin ha1
VIRAL PROTEIN/IMMUNE SYSTEM
01/19/17
CryoEM structure of an influenza virus receptor-binding site antibody-antigen interface - Class 1
HOMO SAPIENS; INFLUENZA A VIRUS; INFLUENZA A VIRUS (A/SOLOMON ISLANDS/3/2006(H1N1))
homo sapiens
null
influenza a virus (a/solomonislands/3/2006(h1n1))
Liu, Y., Pan, J., Caradonna, T., Jenni, S., Raymond, D.D., Schmidt, A.G., Harrison, S.C., Grigorieff, N.
4.8
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
1hil
B
A
0
null
null
null
null
IMMUNOGLOBULIN
07/08/92
STRUCTURAL EVIDENCE FOR INDUCED FIT AS A MECHANISM FOR ANTIGEN-ANTIBODY RECOGNITION
MUS MUSCULUS
mus musculus
mus musculus
null
Rini, J.M., Wilson, I.A.
2.0
X-RAY DIFFRACTION
unknown
0.195
false
false
IGHV5
IGKV8
Kappa
null
null
null
null
null
7dcc
D
H
0
E
protein
null
spike glycoprotein
VIRAL PROTEIN
10/24/20
S-3C1-F3b structure, all the three RBDs are in the up conformation and each of them associates with a 3C1 Fab
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; MUS MUSCULUS
mus musculus
mus musculus
severe acute respiratory syndrome coronavirus2
Cong, Y., Liu, C.X.
4.3
ELECTRON MICROSCOPY
null
null
false
false
IGHV3
IGKV6
Kappa
null
null
null
null
null
6k5f
C
D
0
A
protein
null
h(+)/cl(-) exchange transporter clca
MEMBRANE PROTEIN
05/28/19
Crystal structure of the CLC-ec1 deltaNC in presence of 200 mM NaBr
ESCHERICHIA COLI; MUS MUSCULUS
null
mus musculus
escherichia coli
Park, K., Lim, H.H.
3.203
X-RAY DIFFRACTION
0.300
0.236
false
true
IGHV4
IGKV4
Kappa
null
null
null
null
null
6xpz
B
C
0
A
protein
null
hemagglutinin
VIRAL PROTEIN/IMMUNE SYSTEM
07/09/20
Human antibody S1V2-83 in complex with the influenza hemagglutinin head domain of A/Moscow/10/1999(H3N2)
INFLUENZA A VIRUS (A/MOSCOW/10/1999(H3N2)); HOMO SAPIENS
homo sapiens
homo sapiens
influenza a virus (a/moscow/10/1999(h3n2))
McCarthy, K.R., Harrison, S.C.
3.45
X-RAY DIFFRACTION
0.307
0.251
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7tca
H
L
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN/Immune System
12/23/21
Cryo-EM structure of SARS-CoV-2 Omicron spike in complex with antibody A19-46.1
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Zhou, T., Kwong, P.D.
3.85
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGLV8
Lambda
null
null
null
null
null
6jri
E
null
0
null
null
null
null
ANTIVIRAL PROTEIN
04/04/19
Crystal structure of Nanobody
VICUGNA PACOS
vicugna pacos
null
null
Mo, X., Li, J., Xu, X., Yuan, A.Y.
3.101
X-RAY DIFFRACTION
0.259
0.235
false
true
IGHV1
null
null
null
null
null
null
null
7a4d
J
null
0
K
peptide
null
aph coiled-coil
DE NOVO PROTEIN
08/19/20
Crystal structure of the APH coiled-coil in complex with nanobodies Nb28 and Nb30
LAMA GLAMA; SYNTHETIC CONSTRUCT
lama glama
null
synthetic construct
Hadzi, S.
2.694
X-RAY DIFFRACTION
0.223
0.177
false
true
IGHV1
null
null
null
null
null
null
null
5jop
E
D
0
A
carbohydrate
NAG
N-ACETYL-D-GLUCOSAMINE
IMMUNE SYSTEM
05/02/16
Crystal structure of anti-glycan antibody Fab14.22 in complex with Streptococcus pneumoniae serotype 14 tetrasaccharide at 1.75 A
MUS MUSCULUS
mus musculus
mus musculus
null
Sarkar, A., Irimia, A., Teyton, L., Wilson, I.A.
1.75
X-RAY DIFFRACTION
0.200
0.165
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
6raj
C
null
0
B
protein
null
multidrug resistance abc transporter atp-binding andpermease protein
TRANSPORT PROTEIN
04/06/19
Heterodimeric ABC exporter TmrAB in vanadate trapped outward-facing open conformation
THERMUS THERMOPHILUS HB27; THERMUS THERMOPHILUS; VICUGNA PACOS
vicugna pacos
null
thermus thermophilus
Thomas, C., Januliene, D., Mehdipour, A.R., Hofmann, S., Hummer, G., Moeller, A., Tampe, R.
3.5
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
6dez
B
A
0
null
null
null
null
IMMUNE SYSTEM
05/13/18
Anti-phosphotyrosine antibody PY20-4D5 Fab complexed with sulfate
SYNTHETIC CONSTRUCT
synthetic construct
synthetic construct
null
Mou, K., Leung, K., Wells, J.A.
3.2
X-RAY DIFFRACTION
0.296
0.228
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7mem
H
L
0
E
protein
null
hemagglutinin ha1 chain
Viral protein/IMMUNE SYSTEM
04/06/21
CryoEM structure of monoclonal Fab 045-09 2B05 binding the lateral patch of influenza virus H1 HA
INFLUENZA A VIRUS (STRAIN SWL A/CALIFORNIA/04/2009 H1N1); HOMO SAPIENS
homo sapiens
homo sapiens
influenza a virus (strain swla/california/04/2009 h1n1)
Han, J., Ward, A.
3.2
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
1mak
null
A
3
null
null
null
null
IMMUNOGLOBULIN
09/16/93
SOLUTION STRUCTURE OF AN ISOLATED ANTIBODY VL DOMAIN
MUS MUSCULUS
null
mus musculus
null
Constantine, K.L., Friedrichs, M.S., Metzler, W.J., Wittekind, M., Hensley, P., Mueller, L.
NOT
SOLUTION NMR
null
null
false
true
unknown
unknown
unknown
null
null
null
null
null
3mls
J
N
0
R
peptide
null
rationally designed v3 mimotope
IMMUNE SYSTEM
04/18/10
Crystal structure of anti-HIV-1 V3 mAb 2557 Fab in complex with a HIV-1 gp120 V3 mimotope
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
null
Kong, X.-P.
2.5
X-RAY DIFFRACTION
0.274
0.216
false
false
IGHV5
IGLV3
Lambda
null
null
null
null
null
4jfy
B
A
0
null
null
null
null
immune system
02/28/13
Apo structure of phosphotyrosine (pYAb) scaffold
ESCHERICHIA COLI
null
null
null
Koerber, J.T., Thomsen, N.D., Hannigan, B.T., Degrado, W.F., Wells, J.A.
2.63
X-RAY DIFFRACTION
0.236
0.188
false
true
IGHV3
IGKV3
Kappa
null
null
null
null
null
5ugy
I
M
0
C
protein
null
hemagglutinin ha1
VIRAL PROTEIN/IMMUNE SYSTEM
01/10/17
Influenza hemagglutinin in complex with a neutralizing antibody
INFLUENZA A VIRUS (A/SOLOMON ISLANDS/3/2006(H1N1)); HOMO SAPIENS
homo sapiens
homo sapiens
influenza a virus (a/solomonislands/3/2006(h1n1))
Whittle, J.R.R., Jenni, S., Harrison, S.C.
2.801
X-RAY DIFFRACTION
0.289
0.259
false
true
IGHV1
IGLV3
Lambda
null
null
null
null
null
1zv5
A
null
0
L
protein
null
lysozyme c
HYDROLASE/IMMUNE SYSTEM
06/01/05
Crystal structure of the variable domain of the camelid heavy-chain antibody D2-L29 in complex with hen egg white lysozyme
CAMELUS DROMEDARIUS; GALLUS GALLUS
camelus dromedarius
null
gallus gallus
De Genst, E., Silence, K., Decanniere, K., Conrath, K., Loris, R., Kinne, J., Muyldermans, S., Wyns, L.
2.0
X-RAY DIFFRACTION
0.239
0.217
false
true
IGHV1
null
null
0
-10.91
SPR
null
16537393
7chf
H
L
0
R
protein
null
sars-cov-2 receptor binding domain
ANTIVIRAL PROTEIN/IMMUNE SYSTEM
07/05/20
Crystal structure of the SARS-CoV-2 RBD in complex with BD-604 Fab and BD-368-2 Fab
HOMO SAPIENS; SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Xiao, J., Zhu, Q.
2.674
X-RAY DIFFRACTION
0.270
0.220
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
4gxu
M
N
0
A
protein
null
hemagglutinin ha1 chain
VIRAL PROTEIN/IMMUNE SYSTEM
09/04/12
Crystal structure of antibody 1F1 bound to the 1918 influenza hemagglutinin
HOMO SAPIENS; INFLUENZA A VIRUS
homo sapiens
homo sapiens
influenza a virus
Ekiert, D.C., Wilson, I.A.
3.294
X-RAY DIFFRACTION
0.255
0.219
false
true
IGHV3
IGLV1
Lambda
0
null
SPR
null
23236279
7v6a
S
s
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
08/20/21
Cry-EM structure of M4-c110-G protein complex
HOMO SAPIENS
homo sapiens
null
homo sapiens | homo sapiens
Wang, J.J., Wu, M., Wu, L.J., Hua, T., Liu, Z.J., Wang, T.
3.6
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
7ki1
N
null
0
A | B | G
protein | protein | protein
NA | NA | NA
guanine nucleotide-binding protein g(s) subunit alphaisoforms short | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1 | guanine nucleotide-binding protein g(i)/g(s)/g(o) subunitgamma-2
MEMBRANE PROTEIN
10/22/20
Taspoglutide-bound Glucagon-Like Peptide-1 (GLP-1) Receptor in Complex with Gs Protein
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
null
homo sapiens | homo sapiens | homo sapiens
Zhang, X., Belousoff, M.J., Danev, R., Sexton, P.M., Wootten, D.
2.5
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
null
null
null
null
null
null
null
1mf2
N
M
0
null
null
null
null
IMMUNOGLOBULIN
12/27/96
ANTI HIV1 PROTEASE FAB COMPLEX
MUS MUSCULUS
mus musculus
mus musculus
null
Lescar, J., Bentley, G.A.
2.6
X-RAY DIFFRACTION
0.307
0.206
false
false
IGHV5
IGKV3
Kappa
null
null
null
null
null
5wob
S
T
0
F
protein
null
insulin
HYDROLASE
08/01/17
Crystal Structure Analysis of Fab1-Bound Human Insulin Degrading Enzyme (IDE) in Complex with Insulin
HOMO SAPIENS; MUS MUSCULOIDES
mus musculoides
mus musculoides
homo sapiens
McCord, L.A., Liang, W.G., Farcasanu, M., Wang, A.G., Koide, S., Tang, W.J.
3.95
X-RAY DIFFRACTION
0.291
0.243
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7cmu
E
e
0
A | B
protein | protein
NA | NA
guanine nucleotide-binding protein g(i) subunit alpha-1 | guanine nucleotide-binding protein g(i)/g(s)/g(t) subunitbeta-1
MEMBRANE PROTEIN
07/29/20
Dopamine Receptor D3R-Gi-Pramipexole complex
HOMO SAPIENS; MUS MUSCULUS; ESCHERICHIA COLI
mus musculus
null
homo sapiens | homo sapiens
Xu, P., Huang, S., Mao, C., Krumm, B., Zhou, X., Tan, Y., Huang, X.-P., Liu, Y., Shen, D.-D., Jiang, Y., Yu, X., Jiang, H., Melcher, K., Roth, B., Cheng, X., Zhang, Y., Xu, H.
3
ELECTRON MICROSCOPY
null
null
true
true
unknown
unknown
unknown
null
null
null
null
null
4xh2
A
B
0
a
peptide
null
unknown
CELL ADHESION
01/04/15
Crystal structure of human paxillin LD4 motif in complex with Fab fragment
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
synthetic construct
Nocula-Lugowska, M., Lugowski, M., Salgia, R., Kossiakoff, A.A.
2.0
X-RAY DIFFRACTION
0.258
0.224
false
true
IGHV3
IGKV1
Kappa
0
-11.216609
Unknown
null
TBD
6waq
C
null
0
D
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
03/25/20
Crystal structure of the SARS-CoV-1 RBD bound by the cross-reactive single-domain antibody SARS VHH-72
LAMA GLAMA; HUMAN SARS CORONAVIRUS
lama glama
null
human sars coronavirus
Wrapp, D., McLellan, J.S.
2.2
X-RAY DIFFRACTION
0.236
0.203
false
true
IGHV1
null
null
null
null
null
null
null
4f33
F
E
0
null
null
null
null
IMMUNE SYSTEM
05/08/12
Crystal Structure of therapeutic antibody MORAb-009
MUS MUSCULUS
null
null
null
Xia, D., Ma, J., Tang, W.K., Esser, L.
1.749
X-RAY DIFFRACTION
0.234
0.208
false
true
IGHV1
IGKV4
Kappa
null
null
null
null
null
7r4q
E
null
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN
02/09/22
The SARS-CoV-2 spike in complex with the 1.29 neutralizing nanobody
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; CAMELUS DROMEDARIUS
camelus dromedarius
null
severe acute respiratory syndrome coronavirus2
Casasnovas, J.M., Melero, R., Arranz, R., Fernandez, L.A.
3.6
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
6qfa
N
null
0
E
protein
null
gamma-aminobutyric acid receptor subunit beta-3,gamma-aminobutyric acid receptor subunit beta-3
MEMBRANE PROTEIN
01/09/19
CryoEM structure of a beta3K279T GABA(A)R homomer in complex with histamine and megabody Mb25
HOMO SAPIENS; HELICOBACTER PYLORI (STRAIN G27); LAMA GLAMA
helicobacter pylori (strain g27), lama glama
null
homo sapiens
Uchanski, T., Masiulis, S., Fischer, B., Kalichuk, V., Wohlkoening, A., Zoegg, T., Remaut, H., Vranken, W., Aricescu, A.R., Pardon, E., Steyaert, J.
2.49
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
null
null
null
null
null
null
null
6peh
H
L
0
null
null
null
null
IMMUNE SYSTEM
06/20/19
Crystal structure of rabbit monoclonal anti-HIV antibody 1C2
HOMO SAPIENS
homo sapiens
homo sapiens
null
Liban, T., Pancera, M.
2.296
X-RAY DIFFRACTION
0.255
0.219
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
4r7n
E
F
0
null
null
null
null
IMMUNE SYSTEM
08/28/14
Fab C2E3
HOMO SAPIENS
homo sapiens
homo sapiens
null
Loyau, J., Didelot, G., Malinge, P., Ravn, U., Magistrelli, G., Depoisier, J.F., Kosco-Vilbois, M., Fischer, N., Thore, S., Rousseau, F.
3.45
X-RAY DIFFRACTION
0.280
0.236
false
true
IGHV4
IGKV6
Kappa
null
null
null
null
null
1uz6
H
L
0
null
null
null
null
IMMUNE SYSTEM
03/05/04
anti-Lewis X Fab fragment uncomplexed
MUS MUSCULUS
mus musculus
mus musculus
null
Van Roon, A.M.M., Pannu, N.S., De Vrind, J.P.M., Hokke, C.H., Deelder, A.M., Van Der marel, G.A., Van Boom, J.H., Abrahams, J.P.
2.05
X-RAY DIFFRACTION
0.244
0.198
false
false
IGHV4
IGKV2
Kappa
null
null
null
null
null
6h06
H
L
0
I
peptide
null
microtubule-associated protein tau
IMMUNE SYSTEM
07/06/18
FAB CBTAU-22.1 IN COMPLEX WITH TAU PEPTIDE V1088-5
HOMO SAPIENS; SYNTHETIC CONSTRUCT
homo sapiens
homo sapiens
homo sapiens
Juraszek, J., Steinbacher, S.
2.63
X-RAY DIFFRACTION
0.270
0.216
false
true
IGHV1
IGKV2
Kappa
0.000006
-7.164753
Unknown
null
TBD
6cxc
G
J
0
B | A
protein | protein
NA | NA
fusion glycoprotein f0, envelope glycoprotein chimera | fusion glycoprotein f0, envelope glycoprotein chimera
VIRAL PROTEIN/IMMUNE SYSTEM
04/02/18
3.9A Cryo-EM structure of murine antibody bound at a novel epitope of respiratory syncytial virus fusion protein
MUS MUSCULUS; HUMAN RESPIRATORY SYNCYTIAL VIRUS A (STRAIN A2); HUMAN IMMUNODEFICIENCY VIRUS 1
mus musculus
mus musculus
human respiratory syncytial virus a (straina2), human immunodeficiency virus 1 | human respiratory syncytial virus a (straina2), human immunodeficiency virus 1
Xie, Q., Wang, Z., Chen, X., Ni, F., Ma, J., Wang, Q.
3.9
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV6
Kappa
null
null
null
null
null
7cwt
N
K
0
B
protein
null
spike glycoprotein
VIRAL PROTEIN
08/31/20
SARS-CoV-2 Spike protein in complex with hb27 and fc05 Fab cocktail
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Cui, Z., Wang, X.
3.7
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGLV1
Lambda
null
null
null
null
null
7lez
R
P
0
N
protein
null
arginase-1
HYDROLASE/IMMUNE SYSTEM
01/15/21
Trimeric human Arginase 1 in complex with mAb1 - 2 hArg:2 mAb1 complex
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Gomez-Llorente, Y., Scapin, G., Palte, R.L.
4.15
ELECTRON MICROSCOPY
null
null
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
7ws5
I
H
0
C
protein
null
spike glycoprotein
VIRAL PROTEIN/IMMUNE SYSTEM
01/28/22
Structures of Omicron Spike complexes illuminate broad-spectrum neutralizing antibody development
SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2; HOMO SAPIENS
homo sapiens
homo sapiens
severe acute respiratory syndrome coronavirus2
Guo, H., Gao, Y., Ji, X., Yang, H.
3.7
ELECTRON MICROSCOPY
null
null
false
true
IGHV3
IGKV1
Kappa
null
null
null
null
null
7d9z
H
L
0
null
null
null
null
IMMUNE SYSTEM
10/14/20
Crystal structure of anti-basigin Fab fragment
ORYCTOLAGUS CUNICULUS
oryctolagus cuniculus
oryctolagus cuniculus
null
Sakuragi, T., Kanai, R., Narita, H., Onishi, E., Miyazaki, T., Baba, T., Nakagawa, A., Toyoshima, C., Nagata, S.
1.123
X-RAY DIFFRACTION
0.150
0.121
false
true
IGHV1
IGKV1
Kappa
null
null
null
null
null
2qtj
B
M
5
null
null
null
null
IMMUNE SYSTEM
08/02/07
Solution structure of human dimeric immunoglobulin A
HOMO SAPIENS
homo sapiens
homo sapiens
null
Bonner, A., Furtado, P.B., Almogren, A., Kerr, M.A., Perkins, S.J.
NOT
SOLUTION SCATTERING
null
null
false
false
IGHV1
IGKV1
Kappa
null
null
null
null
null
7omn
B
null
0
null
null
null
null
IMMUNE SYSTEM
05/24/21
Anti-EphA1 JD1-1 VH domain
HOMO SAPIENS
homo sapiens
null
null
Ereno Orbea, J., Nilvebrant, J., Sidhu, S., Julien, J.P.
1.7
X-RAY DIFFRACTION
0.222
0.203
false
true
IGHV3
null
null
null
null
null
null
null
4xbg
H
L
0
H
Hapten
44E
(2R)-3-(phosphonooxy)propane-1,2-diyl dihexanoate
IMMUNE SYSTEM
12/16/14
Crystal structure of human 4E10 Fab in complex with phosphatidic acid (06:0 PA): 2.73 A resolution
HOMO SAPIENS
homo sapiens
homo sapiens
homo sapiens
Irimia, A., Stanfield, R.L., Wilson, I.A.
2.73
X-RAY DIFFRACTION
0.246
0.202
false
true
IGHV1
IGKV3
Kappa
null
null
null
null
null
5mhr
K
J
0
C
protein
null
viral attachment protein sigma 1
IMMUNE SYSTEM
11/25/16
T3D reovirus sigma1 complexed with 9BG5 Fab fragments
REOVIRUS SP.; MUS MUSCULUS
mus musculus
mus musculus
reovirus sp.
Stehle, T., Dietrich, M.H.
3.0
X-RAY DIFFRACTION
0.247
0.212
false
false
IGHV1
IGKV4
Kappa
null
null
null
null
null
5o6v
H
L
0
B
protein
null
genome polyprotein
VIRUS
06/07/17
The cryo-EM structure of Tick-borne encephalitis virus complexed with Fab fragment of neutralizing antibody 19/1786
TICK-BORNE ENCEPHALITIS VIRUS (STRAIN HYPR); MUS MUSCULUS
mus musculus
mus musculus
tick-borne encephalitis virus (strain hypr)
Fuzik, T., Plevka, P.
3.9, 3.9
ELECTRON MICROSCOPY
null
null
false
false
IGHV5
IGKV6
Kappa
null
null
null
null
null
6c5j
H
L
0
H
carbohydrate
GP1
polysaccharide
IMMUNE SYSTEM, SUGAR BINDING PROTEIN
01/16/18
S25-23 Fab in complex with Chlamydiaceae LPS (Crystal form 1)
MUS MUSCULUS
mus musculus
mus musculus
mus musculus
Haji-Ghassemi, O., Evans, S.V.
2.29
X-RAY DIFFRACTION
0.239
0.193
false
false
IGHV2
IGKV1
Kappa
null
null
null
null
null
5yd4
E
e
0
F
peptide
null
epitope peptide (mutation t6a)
IMMUNE SYSTEM
09/11/17
Crystal structure of the scFv antibody 4B08 with epitope peptide (mutation T6A)
MUS MUSCULUS; SYNTHETIC CONSTRUCT
mus musculus
null
homo sapiens
Caaveiro, J.M.M., Miyanabe, K., Tsumoto, K.
1.35
X-RAY DIFFRACTION
0.173
0.135
true
true
unknown
unknown
unknown
null
null
null
null
null
3lzf
H
L
0
A
protein
null
hemagglutinin, ha1 subunit
VIRAL PROTEIN/IMMUNE SYSTEM
03/01/10
Crystal Structure of Fab 2D1 in Complex with the 1918 Influenza Virus Hemagglutinin
INFLUENZA A VIRUS; HOMO SAPIENS
homo sapiens
homo sapiens
influenza a virus
Ekiert, D.C., Wilson, I.A.
2.8
X-RAY DIFFRACTION
0.259
0.230
false
true
IGHV2
IGLV1
Lambda
null
null
null
null
null
4mqx
C
D
0
A
protein
null
h(+)/cl(-) exchange transporter clca
metal transport, membrane protein
09/16/13
CLC-ec1 Fab Complex Cysless A399C-A432C mutant
ESCHERICHIA COLI; MUS MUSCULUS
mus musculus
mus musculus
escherichia coli
Basilio, D., Noack, K., Picollo, A., Accardi, A.
3.516
X-RAY DIFFRACTION
0.258
0.223
false
true
IGHV4
IGKV4
Kappa
null
null
null
null
null
5t3s
D
E
0
B
protein
null
envelope glycoprotein gp160
IMMUNE SYSTEM
08/26/16
HIV gp140 trimer MD39-10MUTA in complex with Fabs PGT124 and 35022
HOMO SAPIENS; HUMAN IMMUNODEFICIENCY VIRUS 1
homo sapiens
homo sapiens
human immunodeficiency virus 1
Stanfield, R.L., Wilson, I.A.
4.5
X-RAY DIFFRACTION
0.309
0.270
false
true
unknown
unknown
unknown
null
null
null
null
null