after_merge
stringlengths 28
79.6k
| before_merge
stringlengths 20
79.6k
| url
stringlengths 38
71
| full_traceback
stringlengths 43
922k
| traceback_type
stringclasses 555
values |
|---|---|---|---|---|
def igetattr(self, name, context=None):
if name == "im_func":
return iter((self._proxied,))
return self._proxied.igetattr(name, context)
|
def igetattr(self, name, context=None):
if name == "im_func":
return iter((self._proxied,))
return super(UnboundMethod, self).igetattr(name, context)
|
https://github.com/PyCQA/astroid/issues/91
|
#!python
Traceback (most recent call last):
File "C:\Python34\Scripts\pylint-script.py", line 9, in <module>
load_entry_point('pylint==1.4.3', 'console_scripts', 'pylint')()
File "e:\projects\repos\pylint\pylint\__init__.py", line 23, in run_pylint
Run(sys.argv[1:])
File "e:\projects\repos\pylint\pylint\lint.py", line 1343, in __init__
linter.check(args)
File "e:\projects\repos\pylint\pylint\lint.py", line 754, in check
self._do_check(files_or_modules)
File "e:\projects\repos\pylint\pylint\lint.py", line 877, in _do_check
self.check_astroid_module(ast_node, walker, rawcheckers, tokencheckers)
File "e:\projects\repos\pylint\pylint\lint.py", line 958, in check_astroid_module
walker.walk(ast_node)
File "e:\projects\repos\pylint\pylint\utils.py", line 877, in walk
self.walk(child)
File "e:\projects\repos\pylint\pylint\utils.py", line 877, in walk
self.walk(child)
File "e:\projects\repos\pylint\pylint\utils.py", line 877, in walk
self.walk(child)
File "e:\projects\repos\pylint\pylint\utils.py", line 877, in walk
self.walk(child)
File "e:\projects\repos\pylint\pylint\utils.py", line 874, in walk
cb(astroid)
File "e:\projects\repos\pylint\pylint\checkers\typecheck.py", line 652, in visit_with
infered.getattr('__enter__')
File "e:\projects\repos\astroid-1\astroid\bases.py", line 264, in getattr
return super(UnboundMethod, self).getattr(name, context)
AttributeError: 'super' object has no attribute 'getattr'
|
AttributeError
|
def from_file(filename):
url_scheme = filename.split("://", 1)[0]
if url_scheme in CONDA_SESSION_SCHEMES:
yamlstr = download_text(filename)
elif not os.path.exists(filename):
raise exceptions.EnvironmentFileNotFound(filename)
else:
with open(filename, "rb") as fp:
yamlb = fp.read()
try:
yamlstr = yamlb.decode("utf-8")
except UnicodeDecodeError:
yamlstr = yamlb.decode("utf-16")
return from_yaml(yamlstr, filename=filename)
|
def from_file(filename):
url_scheme = filename.split("://", 1)[0]
if url_scheme in CONDA_SESSION_SCHEMES:
yamlstr = download_text(filename)
elif not os.path.exists(filename):
raise exceptions.EnvironmentFileNotFound(filename)
else:
with open(filename, "r") as fp:
yamlstr = fp.read()
return from_yaml(yamlstr, filename=filename)
|
https://github.com/conda/conda/issues/9749
|
DEBUG conda.gateways.logging:set_verbosity(231): verbosity set to 3
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "D:\Program_Files\miniconda3\lib\site-packages\conda\exceptions.py", line 1079, in __call__
return func(*args, **kwargs)
File "D:\Program_Files\miniconda3\lib\site-packages\conda_env\cli\main.py", line 80, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "D:\Program_Files\miniconda3\lib\site-packages\conda_env\cli\main_create.py", line 80, in execute
directory=os.getcwd())
File "D:\Program_Files\miniconda3\lib\site-packages\conda_env\specs\__init__.py", line 40, in detect
if spec.can_handle():
File "D:\Program_Files\miniconda3\lib\site-packages\conda_env\specs\yaml_file.py", line 18, in can_handle
self._environment = env.from_file(self.filename)
File "D:\Program_Files\miniconda3\lib\site-packages\conda_env\env.py", line 151, in from_file
return from_yaml(yamlstr, filename=filename)
File "D:\Program_Files\miniconda3\lib\site-packages\conda_env\env.py", line 136, in from_yaml
data = yaml_load_standard(yamlstr)
File "D:\Program_Files\miniconda3\lib\site-packages\conda\common\serialize.py", line 76, in yaml_load_standard
return yaml.load(string, Loader=yaml.Loader, version="1.2")
File "D:\Program_Files\miniconda3\lib\site-packages\ruamel_yaml\main.py", line 933, in load
loader = Loader(stream, version, preserve_quotes=preserve_quotes)
File "D:\Program_Files\miniconda3\lib\site-packages\ruamel_yaml\loader.py", line 50, in __init__
Reader.__init__(self, stream, loader=self)
File "D:\Program_Files\miniconda3\lib\site-packages\ruamel_yaml\reader.py", line 85, in __init__
self.stream = stream # type: Any # as .read is called
File "D:\Program_Files\miniconda3\lib\site-packages\ruamel_yaml\reader.py", line 117, in stream
self.check_printable(val)
File "D:\Program_Files\miniconda3\lib\site-packages\ruamel_yaml\reader.py", line 255, in check_printable
'special characters are not allowed',
ruamel_yaml.reader.ReaderError: unacceptable character #x0000: special characters are not allowed
in "<unicode string>", position 3
`$ D:\Program_Files\miniconda3\Scripts\conda-env-script.py create -v -v -v -f .\environment.yml`
environment variables:
CIO_TEST=<not set>
CONDA_AUTO_UPDATE_CONDA=false
CONDA_DEFAULT_ENV=base
CONDA_EXE=D:\Program_Files\miniconda3\Scripts\conda.exe
CONDA_PREFIX=D:\Program_Files\miniconda3
CONDA_PROMPT_MODIFIER=(base)
CONDA_PYTHON_EXE=D:\Program_Files\miniconda3\python.exe
CONDA_ROOT=D:\Program_Files\miniconda3
CONDA_SHLVL=1
HOMEPATH=\
PATH=D:\Program_Files\miniconda3;D:\Program_Files\miniconda3\Library\mingw-
w64\bin;D:\Program_Files\miniconda3\Library\usr\bin;D:\Program_Files\m
iniconda3\Library\bin;D:\Program_Files\miniconda3\Scripts;D:\Program_F
iles\miniconda3\bin;D:\Program_Files\miniconda3;D:\Program_Files\minic
onda3\Library\mingw-w64\bin;D:\Program_Files\miniconda3\Library\usr\bi
n;D:\Program_Files\miniconda3\Library\bin;D:\Program_Files\miniconda3\
Scripts;D:\Program_Files\miniconda3\bin;D:\Program_Files\miniconda3\co
ndabin;C:\Oracle11\Ora11G-64\11.2.0\client_1\bin;C:\Oracle\ORA11\11.2.
0\bin;C:\WINDOWS\system32;C:\WINDOWS;C:\WINDOWS\System32\Wbem;C:\WINDO
WS\System32\WindowsPowerShell\v1.0;C:\WINDOWS\System32\OpenSSH;C:\Prog
ram Files (x86)\WebEx\Productivity Tools;C:\Program
Files\Git\cmd;C:\Program Files (x86)\Microsoft SQL
Server\150\DTS\Binn;C:\Program Files (x86)\ArcGIS\Bin;C:\Program Files
(x86)\ArcGIS\EsriProductionMapping\Desktop10.5\Bin;C:\Program
Files\nodejs;C:\ProgramData\chocolatey\bin;C:\Program Files (x86)\Webe
x\Webex\Applications;C:\Users\avitale\AppData\Local\Microsoft\WindowsA
pps;C:\Users\avitale\AppData\Local\Programs\Microsoft VS Code\bin;C:\U
sers\avitale\AppData\Roaming\npm;C:\Python3X;C:\OSGeo4W\bin;C:\Python3
X;C:\OSGeo4W\bin;C:\Python3X;C:\OSGeo4W\bin;C:\OSGeo4W\bin;C:\Program
Files\dotnet;C:\Users\avitale\AppData\Local\Microsoft\WindowsApps;.;C:
\Users\avitale\AppData\Local\Programs\Microsoft VS Code\bin;C:\Users\a
vitale\AppData\Roaming\npm;C:\Users\avitale\.dotnet\tools
PSMODULEPATH=C:\Users\avitale\Documents\WindowsPowerShell\Modules;C:\Program Files\
WindowsPowerShell\Modules;C:\WINDOWS\system32\WindowsPowerShell\v1.0\M
odules
REQUESTS_CA_BUNDLE=<not set>
SSL_CERT_FILE=<not set>
active environment : base
active env location : D:\Program_Files\miniconda3
shell level : 1
user config file : C:\Users\avitale\.condarc
populated config files : C:\Users\avitale\.condarc
conda version : 4.8.2
conda-build version : not installed
python version : 3.7.4.final.0
virtual packages : __cuda=10.2
base environment : D:\Program_Files\miniconda3 (writable)
channel URLs : https://repo.anaconda.com/pkgs/main/win-64
https://repo.anaconda.com/pkgs/main/noarch
https://repo.anaconda.com/pkgs/r/win-64
https://repo.anaconda.com/pkgs/r/noarch
https://repo.anaconda.com/pkgs/msys2/win-64
https://repo.anaconda.com/pkgs/msys2/noarch
package cache : D:\Program_Files\miniconda3\pkgs
C:\Users\avitale\.conda\pkgs
C:\Users\avitale\AppData\Local\conda\conda\pkgs
envs directories : D:\Program_Files\miniconda3\envs
C:\Users\avitale\.conda\envs
C:\Users\avitale\AppData\Local\conda\conda\envs
platform : win-64
user-agent : conda/4.8.2 requests/2.22.0 CPython/3.7.4 Windows/10 Windows/10.0.17134
administrator : False
netrc file : None
offline mode : False
An unexpected error has occurred. Conda has prepared the above report.
If submitted, this report will be used by core maintainers to improve
future releases of conda.
Would you like conda to send this report to the core maintainers?
[y/N]:
No report sent. To permanently opt-out, use
$ conda config --set report_errors false
|
ruamel_yaml.reader.ReaderError
|
def configure_parser(sub_parsers):
config_parser = sub_parsers.add_parser(
"config",
formatter_class=RawDescriptionHelpFormatter,
description=config_description,
help=config_description,
epilog=config_example,
)
config_parser.set_defaults(func=".main_config.execute")
config_subparser = config_parser.add_subparsers()
configure_vars_parser(config_subparser)
|
def configure_parser(sub_parsers):
config_parser = sub_parsers.add_parser(
"config",
formatter_class=RawDescriptionHelpFormatter,
description=config_description,
help=config_description,
epilog=config_example,
)
config_subparser = config_parser.add_subparsers()
configure_vars_parser(config_subparser)
|
https://github.com/conda/conda/issues/9625
|
Traceback (most recent call last):
File "/home/USERNAME/miniconda3/lib/python3.7/site-packages/conda/exceptions.py", line 1078, in __call__
return func(*args, **kwargs)
File "/home/USERNAME/miniconda3/lib/python3.7/site-packages/conda_env/cli/main.py", line 76, in do_call
relative_mod, func_name = args.func.rsplit('.', 1)
AttributeError: 'Namespace' object has no attribute 'func'
|
AttributeError
|
def from_dist_str(cls, dist_str):
parts = {}
if dist_str[-len(CONDA_PACKAGE_EXTENSION_V2) :] == CONDA_PACKAGE_EXTENSION_V2:
dist_str = dist_str[: -len(CONDA_PACKAGE_EXTENSION_V2)]
elif dist_str[-len(CONDA_PACKAGE_EXTENSION_V1) :] == CONDA_PACKAGE_EXTENSION_V1:
dist_str = dist_str[: -len(CONDA_PACKAGE_EXTENSION_V1)]
if "::" in dist_str:
channel_subdir_str, dist_str = dist_str.split("::", 1)
if "/" in channel_subdir_str:
channel_str, subdir = channel_subdir_str.rsplit("/", 1)
if subdir not in context.known_subdirs:
channel_str = channel_subdir_str
subdir = None
parts["channel"] = channel_str
if subdir:
parts["subdir"] = subdir
else:
parts["channel"] = channel_subdir_str
name, version, build = dist_str.rsplit("-", 2)
parts.update(
{
"name": name,
"version": version,
"build": build,
}
)
return cls(**parts)
|
def from_dist_str(cls, dist_str):
parts = {}
if dist_str.endswith(CONDA_PACKAGE_EXTENSION_V1):
dist_str = dist_str[: -len(CONDA_PACKAGE_EXTENSION_V1)]
if "::" in dist_str:
channel_subdir_str, dist_str = dist_str.split("::", 1)
if "/" in channel_subdir_str:
channel_str, subdir = channel_subdir_str.split("/", 2)
parts.update(
{
"channel": channel_str,
"subdir": subdir,
}
)
else:
parts["channel"] = channel_subdir_str
name, version, build = dist_str.rsplit("-", 2)
parts.update(
{
"name": name,
"version": version,
"build": build,
}
)
return cls(**parts)
|
https://github.com/conda/conda/issues/9814
|
Traceback (most recent call last):
File "/Users/christian/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 1079, in __call__
return func(*args, **kwargs)
File "/Users/christian/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 84, in _main
exit_code = do_call(args, p)
File "/Users/christian/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 82, in do_call
return getattr(module, func_name)(args, parser)
File "/Users/christian/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 20, in execute
install(args, parser, 'install')
File "/Users/christian/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 250, in install
index)
File "/Users/christian/miniconda3/lib/python3.6/site-packages/conda/plan.py", line 289, in revert_actions
target_state = {MatchSpec.from_dist_str(dist_str) for dist_str in h.get_state(revision)}
File "/Users/christian/miniconda3/lib/python3.6/site-packages/conda/plan.py", line 289, in <setcomp>
target_state = {MatchSpec.from_dist_str(dist_str) for dist_str in h.get_state(revision)}
File "/Users/christian/miniconda3/lib/python3.6/site-packages/conda/models/match_spec.py", line 186, in from_dist_str
channel_str, subdir = channel_subdir_str.split('/', 2)
ValueError: too many values to unpack (expected 2)
|
ValueError
|
def get_paths(self):
"""
Read the list of installed paths from record or source file.
Example
-------
[(u'skdata/__init__.py', u'sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU', 0),
(u'skdata/diabetes.py', None, None),
...
]
"""
manifest_full_path = self.manifest_full_path
if manifest_full_path:
python_version = self.python_version
sp_dir = get_python_site_packages_short_path(python_version) + "/"
prepend_metadata_dirname = basename(manifest_full_path) == "installed-files.txt"
if prepend_metadata_dirname:
path_prepender = basename(dirname(manifest_full_path)) + "/"
else:
path_prepender = ""
def process_csv_row(reader):
seen = []
records = []
for row in reader:
cleaned_path = posix_normpath(
"%s%s%s" % (sp_dir, path_prepender, row[0])
)
if len(row) == 3:
checksum, size = row[1:]
if checksum:
assert checksum.startswith("sha256="), (
self._metadata_dir_full_path,
cleaned_path,
checksum,
)
checksum = checksum[7:]
else:
checksum = None
size = int(size) if size else None
else:
checksum = size = None
if cleaned_path not in seen and row[0]:
seen.append(cleaned_path)
records.append((cleaned_path, checksum, size))
else:
continue
return tuple(records)
csv_delimiter = ","
if PY2:
csv_delimiter = csv_delimiter.encode("utf-8")
with open(manifest_full_path) as csvfile:
record_reader = csv_reader(csvfile, delimiter=csv_delimiter)
# format of each record is (path, checksum, size)
records = process_csv_row(record_reader)
files_set = set(record[0] for record in records)
_pyc_path, _py_file_re = pyc_path, PY_FILE_RE
py_ver_mm = get_major_minor_version(python_version, with_dot=False)
missing_pyc_files = (
ff
for ff in (
_pyc_path(f, py_ver_mm) for f in files_set if _py_file_re.match(f)
)
if ff not in files_set
)
records = sorted(
concatv(records, ((pf, None, None) for pf in missing_pyc_files))
)
return records
return []
|
def get_paths(self):
"""
Read the list of installed paths from record or source file.
Example
-------
[(u'skdata/__init__.py', u'sha256=47DEQpj8HBSa-_TImW-5JCeuQeRkm5NMpJWZG3hSuFU', 0),
(u'skdata/diabetes.py', None, None),
...
]
"""
manifest_full_path = self.manifest_full_path
if manifest_full_path:
python_version = self.python_version
sp_dir = get_python_site_packages_short_path(python_version) + "/"
prepend_metadata_dirname = basename(manifest_full_path) == "installed-files.txt"
if prepend_metadata_dirname:
path_prepender = basename(dirname(manifest_full_path)) + "/"
else:
path_prepender = ""
def process_csv_row(row):
cleaned_path = posix_normpath("%s%s%s" % (sp_dir, path_prepender, row[0]))
if len(row) == 3:
checksum, size = row[1:]
if checksum:
assert checksum.startswith("sha256="), (
self._metadata_dir_full_path,
cleaned_path,
checksum,
)
checksum = checksum[7:]
else:
checksum = None
size = int(size) if size else None
else:
checksum = size = None
return cleaned_path, checksum, size
csv_delimiter = ","
if PY2:
csv_delimiter = csv_delimiter.encode("utf-8")
with open(manifest_full_path) as csvfile:
record_reader = csv_reader(csvfile, delimiter=csv_delimiter)
# format of each record is (path, checksum, size)
records = tuple(process_csv_row(row) for row in record_reader if row[0])
files_set = set(record[0] for record in records)
_pyc_path, _py_file_re = pyc_path, PY_FILE_RE
py_ver_mm = get_major_minor_version(python_version, with_dot=False)
missing_pyc_files = (
ff
for ff in (
_pyc_path(f, py_ver_mm) for f in files_set if _py_file_re.match(f)
)
if ff not in files_set
)
records = sorted(
concatv(records, ((pf, None, None) for pf in missing_pyc_files))
)
return records
return []
|
https://github.com/conda/conda/issues/9104
|
conda create --yes -n py-3.7 python==3.7
conda activate py-3.7
pip install jeepney==0.4.1
conda list
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/bago/conda/lib/python3.7/site-packages/conda/exceptions.py", line 1003, in __call__
return func(*args, **kwargs)
File "/home/bago/conda/lib/python3.7/site-packages/conda/cli/main.py", line 84, in _main
exit_code = do_call(args, p)
File "/home/bago/conda/lib/python3.7/site-packages/conda/cli/conda_argparse.py", line 82, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/bago/conda/lib/python3.7/site-packages/conda/cli/main_list.py", line 142, in execute
show_channel_urls=context.show_channel_urls)
File "/home/bago/conda/lib/python3.7/site-packages/conda/cli/main_list.py", line 80, in print_packages
show_channel_urls=show_channel_urls)
File "/home/bago/conda/lib/python3.7/site-packages/conda/cli/main_list.py", line 45, in list_packages
installed = sorted(PrefixData(prefix, pip_interop_enabled=True).iter_records(),
File "/home/bago/conda/lib/python3.7/site-packages/conda/core/prefix_data.py", line 117, in iter_records
return itervalues(self._prefix_records)
File "/home/bago/conda/lib/python3.7/site-packages/conda/core/prefix_data.py", line 146, in _prefix_records
return self.__prefix_records or self.load() or self.__prefix_records
File "/home/bago/conda/lib/python3.7/site-packages/conda/core/prefix_data.py", line 70, in load
self._load_site_packages()
File "/home/bago/conda/lib/python3.7/site-packages/conda/core/prefix_data.py", line 261, in _load_site_packages
python_record = read_python_record(self.prefix_path, af, python_pkg_record.version)
File "/home/bago/conda/lib/python3.7/site-packages/conda/gateways/disk/read.py", line 253, in read_python_record
paths_tups = pydist.get_paths()
File "/home/bago/conda/lib/python3.7/site-packages/conda/common/pkg_formats/python.py", line 268, in get_paths
records = sorted(concatv(records, ((pf, None, None) for pf in missing_pyc_files)))
TypeError: '<' not supported between instances of 'NoneType' and 'str'
`$ /home/bago/conda/bin/conda list`
|
TypeError
|
def process_csv_row(reader):
seen = []
records = []
for row in reader:
cleaned_path = posix_normpath("%s%s%s" % (sp_dir, path_prepender, row[0]))
if len(row) == 3:
checksum, size = row[1:]
if checksum:
assert checksum.startswith("sha256="), (
self._metadata_dir_full_path,
cleaned_path,
checksum,
)
checksum = checksum[7:]
else:
checksum = None
size = int(size) if size else None
else:
checksum = size = None
if cleaned_path not in seen and row[0]:
seen.append(cleaned_path)
records.append((cleaned_path, checksum, size))
else:
continue
return tuple(records)
|
def process_csv_row(row):
cleaned_path = posix_normpath("%s%s%s" % (sp_dir, path_prepender, row[0]))
if len(row) == 3:
checksum, size = row[1:]
if checksum:
assert checksum.startswith("sha256="), (
self._metadata_dir_full_path,
cleaned_path,
checksum,
)
checksum = checksum[7:]
else:
checksum = None
size = int(size) if size else None
else:
checksum = size = None
return cleaned_path, checksum, size
|
https://github.com/conda/conda/issues/9104
|
conda create --yes -n py-3.7 python==3.7
conda activate py-3.7
pip install jeepney==0.4.1
conda list
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/bago/conda/lib/python3.7/site-packages/conda/exceptions.py", line 1003, in __call__
return func(*args, **kwargs)
File "/home/bago/conda/lib/python3.7/site-packages/conda/cli/main.py", line 84, in _main
exit_code = do_call(args, p)
File "/home/bago/conda/lib/python3.7/site-packages/conda/cli/conda_argparse.py", line 82, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/bago/conda/lib/python3.7/site-packages/conda/cli/main_list.py", line 142, in execute
show_channel_urls=context.show_channel_urls)
File "/home/bago/conda/lib/python3.7/site-packages/conda/cli/main_list.py", line 80, in print_packages
show_channel_urls=show_channel_urls)
File "/home/bago/conda/lib/python3.7/site-packages/conda/cli/main_list.py", line 45, in list_packages
installed = sorted(PrefixData(prefix, pip_interop_enabled=True).iter_records(),
File "/home/bago/conda/lib/python3.7/site-packages/conda/core/prefix_data.py", line 117, in iter_records
return itervalues(self._prefix_records)
File "/home/bago/conda/lib/python3.7/site-packages/conda/core/prefix_data.py", line 146, in _prefix_records
return self.__prefix_records or self.load() or self.__prefix_records
File "/home/bago/conda/lib/python3.7/site-packages/conda/core/prefix_data.py", line 70, in load
self._load_site_packages()
File "/home/bago/conda/lib/python3.7/site-packages/conda/core/prefix_data.py", line 261, in _load_site_packages
python_record = read_python_record(self.prefix_path, af, python_pkg_record.version)
File "/home/bago/conda/lib/python3.7/site-packages/conda/gateways/disk/read.py", line 253, in read_python_record
paths_tups = pydist.get_paths()
File "/home/bago/conda/lib/python3.7/site-packages/conda/common/pkg_formats/python.py", line 268, in get_paths
records = sorted(concatv(records, ((pf, None, None) for pf in missing_pyc_files)))
TypeError: '<' not supported between instances of 'NoneType' and 'str'
`$ /home/bago/conda/bin/conda list`
|
TypeError
|
def typify(value, type_hint=None):
"""Take a primitive value, usually a string, and try to make a more relevant type out of it.
An optional type_hint will try to coerce the value to that type.
Args:
value (Any): Usually a string, not a sequence
type_hint (type or Tuple[type]):
Examples:
>>> typify('32')
32
>>> typify('32', float)
32.0
>>> typify('32.0')
32.0
>>> typify('32.0.0')
'32.0.0'
>>> [typify(x) for x in ('true', 'yes', 'on')]
[True, True, True]
>>> [typify(x) for x in ('no', 'FALSe', 'off')]
[False, False, False]
>>> [typify(x) for x in ('none', 'None', None)]
[None, None, None]
"""
# value must be a string, or there at least needs to be a type hint
if isinstance(value, string_types):
value = value.strip()
elif type_hint is None:
# can't do anything because value isn't a string and there's no type hint
return value
# now we either have a stripped string, a type hint, or both
# use the hint if it exists
if isiterable(type_hint):
if isinstance(type_hint, type) and issubclass(type_hint, Enum):
try:
return type_hint(value)
except ValueError as e:
try:
return type_hint[value]
except KeyError:
raise TypeCoercionError(value, text_type(e))
type_hint = set(type_hint)
if not (type_hint - NUMBER_TYPES_SET):
return numberify(value)
elif not (type_hint - STRING_TYPES_SET):
return text_type(value)
elif not (type_hint - {bool, NoneType}):
return boolify(value, nullable=True)
elif not (type_hint - (STRING_TYPES_SET | {bool})):
return boolify(value, return_string=True)
elif not (type_hint - (STRING_TYPES_SET | {NoneType})):
value = text_type(value)
return None if value.lower() == "none" else value
elif not (type_hint - {bool, int}):
return typify_str_no_hint(text_type(value))
else:
raise NotImplementedError()
elif type_hint is not None:
# coerce using the type hint, or use boolify for bool
try:
return boolify(value) if type_hint == bool else type_hint(value)
except ValueError as e:
# ValueError: invalid literal for int() with base 10: 'nope'
raise TypeCoercionError(value, text_type(e))
else:
# no type hint, but we know value is a string, so try to match with the regex patterns
# if there's still no match, `typify_str_no_hint` will return `value`
return typify_str_no_hint(value)
|
def typify(value, type_hint=None):
"""Take a primitive value, usually a string, and try to make a more relevant type out of it.
An optional type_hint will try to coerce the value to that type.
Args:
value (Any): Usually a string, not a sequence
type_hint (type or Tuple[type]):
Examples:
>>> typify('32')
32
>>> typify('32', float)
32.0
>>> typify('32.0')
32.0
>>> typify('32.0.0')
'32.0.0'
>>> [typify(x) for x in ('true', 'yes', 'on')]
[True, True, True]
>>> [typify(x) for x in ('no', 'FALSe', 'off')]
[False, False, False]
>>> [typify(x) for x in ('none', 'None', None)]
[None, None, None]
"""
# value must be a string, or there at least needs to be a type hint
if isinstance(value, string_types):
value = value.strip()
elif type_hint is None:
# can't do anything because value isn't a string and there's no type hint
return value
# now we either have a stripped string, a type hint, or both
# use the hint if it exists
if isiterable(type_hint):
if isinstance(type_hint, type) and issubclass(type_hint, Enum):
try:
return type_hint(value)
except ValueError:
return type_hint[value]
type_hint = set(type_hint)
if not (type_hint - NUMBER_TYPES_SET):
return numberify(value)
elif not (type_hint - STRING_TYPES_SET):
return text_type(value)
elif not (type_hint - {bool, NoneType}):
return boolify(value, nullable=True)
elif not (type_hint - (STRING_TYPES_SET | {bool})):
return boolify(value, return_string=True)
elif not (type_hint - (STRING_TYPES_SET | {NoneType})):
value = text_type(value)
return None if value.lower() == "none" else value
elif not (type_hint - {bool, int}):
return typify_str_no_hint(text_type(value))
else:
raise NotImplementedError()
elif type_hint is not None:
# coerce using the type hint, or use boolify for bool
try:
return boolify(value) if type_hint == bool else type_hint(value)
except ValueError as e:
# ValueError: invalid literal for int() with base 10: 'nope'
raise TypeCoercionError(value, text_type(e))
else:
# no type hint, but we know value is a string, so try to match with the regex patterns
# if there's still no match, `typify_str_no_hint` will return `value`
return typify_str_no_hint(value)
|
https://github.com/conda/conda/issues/8176
|
error: RuntimeError('Could not run any SAT solver.')
command: C:\Tools\Progs\python\anaconda3\scripts\conda-script.py install -p C:\Tools\Progs\python\anaconda3 -y anaconda-client==1.7.2
user_agent: conda/4.6.1 requests/2.21.0 CPython/3.7.1 Windows/10 Windows/10.0.15063
_messageid: -9223372036617369659
_messagetime: 1548779675918 / 2019-01-29 10:34:35
Traceback (most recent call last):
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\exceptions.py", line 1001, in __call__
return func(*args, **kwargs)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\cli\main.py", line 84, in _main
exit_code = do_call(args, p)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\cli\conda_argparse.py", line 81, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\cli\main_install.py", line 21, in execute
install(args, parser, 'install')
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\cli\install.py", line 250, in install
force_reinstall=context.force_reinstall or context.force,
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\core\solve.py", line 107, in solve_for_transaction
force_remove, force_reinstall)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\core\solve.py", line 145, in solve_for_diff
force_remove)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\core\solve.py", line 240, in solve_final_state
ssc = self._find_inconsistent_packages(ssc)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\core\solve.py", line 342, in _find_inconsistent_packages
_, inconsistent_precs = ssc.r.bad_installed(ssc.solution_precs, ())
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\resolve.py", line 896, in bad_installed
C = r2.gen_clauses()
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\common\io.py", line 85, in decorated
return f(*args, **kwds)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\resolve.py", line 668, in gen_clauses
C = Clauses(sat_solver_cls=get_sat_solver_cls(context.sat_solver))
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\_vendor\auxlib\decorators.py", line 56, in _memoized_func
result = func(*args, **kwargs)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\common\logic.py", line 293, in get_sat_solver_cls
raise RuntimeError('Could not run any SAT solver.')
RuntimeError: Could not run any SAT solver.
|
RuntimeError
|
def category_map(self):
return odict(
(
(
"Channel Configuration",
(
"channels",
"channel_alias",
"default_channels",
"override_channels_enabled",
"whitelist_channels",
"custom_channels",
"custom_multichannels",
"migrated_channel_aliases",
"migrated_custom_channels",
"add_anaconda_token",
"allow_non_channel_urls",
),
),
(
"Basic Conda Configuration",
( # TODO: Is there a better category name here?
"envs_dirs",
"pkgs_dirs",
),
),
(
"Network Configuration",
(
"client_ssl_cert",
"client_ssl_cert_key",
"local_repodata_ttl",
"offline",
"proxy_servers",
"remote_connect_timeout_secs",
"remote_max_retries",
"remote_read_timeout_secs",
"ssl_verify",
),
),
(
"Solver Configuration",
(
"aggressive_update_packages",
"auto_update_conda",
"channel_priority",
"create_default_packages",
"disallowed_packages",
"force_reinstall",
"pinned_packages",
"pip_interop_enabled",
"prune",
"track_features",
),
),
(
"Package Linking and Install-time Configuration",
(
"allow_softlinks",
"always_copy",
"always_softlink",
"path_conflict",
"rollback_enabled",
"safety_checks",
"extra_safety_checks",
"shortcuts",
"non_admin_enabled",
),
),
(
"Conda-build Configuration",
(
"bld_path",
"croot",
"anaconda_upload",
"conda_build",
),
),
(
"Output, Prompt, and Flow Control Configuration",
(
"always_yes",
"auto_activate_base",
"changeps1",
"env_prompt",
"json",
"notify_outdated_conda",
"quiet",
"report_errors",
"show_channel_urls",
"verbosity",
),
),
(
"CLI-only",
(
"deps_modifier",
"update_modifier",
"force",
"force_remove",
"clobber",
"dry_run",
"download_only",
"ignore_pinned",
"use_index_cache",
"use_local",
),
),
(
"Hidden and Undocumented",
(
"allow_cycles", # allow cyclical dependencies, or raise
"allow_conda_downgrades",
"add_pip_as_python_dependency",
"debug",
"default_python",
"enable_private_envs",
"error_upload_url", # should remain undocumented
"featureless_minimization_disabled_feature_flag",
"force_32bit",
"root_prefix",
"sat_solver",
"solver_ignore_timestamps",
"subdir",
"subdirs",
# https://conda.io/docs/config.html#disable-updating-of-dependencies-update-dependencies # NOQA
# I don't think this documentation is correct any longer. # NOQA
"target_prefix_override",
# used to override prefix rewriting, for e.g. building docker containers or RPMs # NOQA
),
),
)
)
|
def category_map(self):
return odict(
(
(
"Channel Configuration",
(
"channels",
"channel_alias",
"default_channels",
"override_channels_enabled",
"whitelist_channels",
"custom_channels",
"custom_multichannels",
"migrated_channel_aliases",
"migrated_custom_channels",
"add_anaconda_token",
"allow_non_channel_urls",
),
),
(
"Basic Conda Configuration",
( # TODO: Is there a better category name here?
"env_prompt",
"envs_dirs",
"pkgs_dirs",
),
),
(
"Network Configuration",
(
"client_ssl_cert",
"client_ssl_cert_key",
"local_repodata_ttl",
"offline",
"proxy_servers",
"remote_connect_timeout_secs",
"remote_max_retries",
"remote_read_timeout_secs",
"ssl_verify",
),
),
(
"Solver Configuration",
(
"aggressive_update_packages",
"auto_update_conda",
"channel_priority",
"create_default_packages",
"disallowed_packages",
"force_reinstall",
"pinned_packages",
"pip_interop_enabled",
"prune",
"track_features",
),
),
(
"Package Linking and Install-time Configuration",
(
"allow_softlinks",
"always_copy",
"always_softlink",
"path_conflict",
"rollback_enabled",
"safety_checks",
"extra_safety_checks",
"shortcuts",
"non_admin_enabled",
),
),
(
"Conda-build Configuration",
(
"bld_path",
"croot",
"anaconda_upload",
"conda_build",
),
),
(
"Output, Prompt, and Flow Control Configuration",
(
"always_yes",
"auto_activate_base",
"changeps1",
"json",
"notify_outdated_conda",
"quiet",
"report_errors",
"show_channel_urls",
"verbosity",
),
),
(
"CLI-only",
(
"deps_modifier",
"update_modifier",
"force",
"force_remove",
"clobber",
"dry_run",
"download_only",
"ignore_pinned",
"use_index_cache",
"use_local",
),
),
(
"Hidden and Undocumented",
(
"allow_cycles", # allow cyclical dependencies, or raise
"allow_conda_downgrades",
"add_pip_as_python_dependency",
"debug",
"default_python",
"enable_private_envs",
"error_upload_url", # should remain undocumented
"featureless_minimization_disabled_feature_flag",
"force_32bit",
"root_prefix",
"sat_solver",
"solver_ignore_timestamps",
"subdir",
"subdirs",
# https://conda.io/docs/config.html#disable-updating-of-dependencies-update-dependencies # NOQA
# I don't think this documentation is correct any longer. # NOQA
"target_prefix_override",
# used to override prefix rewriting, for e.g. building docker containers or RPMs # NOQA
),
),
)
)
|
https://github.com/conda/conda/issues/8176
|
error: RuntimeError('Could not run any SAT solver.')
command: C:\Tools\Progs\python\anaconda3\scripts\conda-script.py install -p C:\Tools\Progs\python\anaconda3 -y anaconda-client==1.7.2
user_agent: conda/4.6.1 requests/2.21.0 CPython/3.7.1 Windows/10 Windows/10.0.15063
_messageid: -9223372036617369659
_messagetime: 1548779675918 / 2019-01-29 10:34:35
Traceback (most recent call last):
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\exceptions.py", line 1001, in __call__
return func(*args, **kwargs)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\cli\main.py", line 84, in _main
exit_code = do_call(args, p)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\cli\conda_argparse.py", line 81, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\cli\main_install.py", line 21, in execute
install(args, parser, 'install')
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\cli\install.py", line 250, in install
force_reinstall=context.force_reinstall or context.force,
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\core\solve.py", line 107, in solve_for_transaction
force_remove, force_reinstall)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\core\solve.py", line 145, in solve_for_diff
force_remove)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\core\solve.py", line 240, in solve_final_state
ssc = self._find_inconsistent_packages(ssc)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\core\solve.py", line 342, in _find_inconsistent_packages
_, inconsistent_precs = ssc.r.bad_installed(ssc.solution_precs, ())
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\resolve.py", line 896, in bad_installed
C = r2.gen_clauses()
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\common\io.py", line 85, in decorated
return f(*args, **kwds)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\resolve.py", line 668, in gen_clauses
C = Clauses(sat_solver_cls=get_sat_solver_cls(context.sat_solver))
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\_vendor\auxlib\decorators.py", line 56, in _memoized_func
result = func(*args, **kwargs)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\common\logic.py", line 293, in get_sat_solver_cls
raise RuntimeError('Could not run any SAT solver.')
RuntimeError: Could not run any SAT solver.
|
RuntimeError
|
def execute_config(args, parser):
stdout_write = getLogger("conda.stdout").info
stderr_write = getLogger("conda.stderr").info
json_warnings = []
json_get = {}
if args.show_sources:
if context.json:
stdout_write(
json.dumps(
context.collect_all(),
sort_keys=True,
indent=2,
separators=(",", ": "),
)
)
else:
lines = []
for source, reprs in iteritems(context.collect_all()):
lines.append("==> %s <==" % source)
lines.extend(format_dict(reprs))
lines.append("")
stdout_write("\n".join(lines))
return
if args.show is not None:
if args.show:
paramater_names = args.show
all_names = context.list_parameters()
not_params = set(paramater_names) - set(all_names)
if not_params:
from ..exceptions import ArgumentError
from ..common.io import dashlist
raise ArgumentError(
"Invalid configuration parameters: %s" % dashlist(not_params)
)
else:
paramater_names = context.list_parameters()
d = OrderedDict((key, getattr(context, key)) for key in paramater_names)
if context.json:
stdout_write(
json.dumps(
d,
sort_keys=True,
indent=2,
separators=(",", ": "),
cls=EntityEncoder,
)
)
else:
# Add in custom formatting
if "custom_channels" in d:
d["custom_channels"] = {
channel.name: "%s://%s" % (channel.scheme, channel.location)
for channel in itervalues(d["custom_channels"])
}
if "custom_multichannels" in d:
from ..common.io import dashlist
d["custom_multichannels"] = {
multichannel_name: dashlist(channels, indent=4)
for multichannel_name, channels in iteritems(
d["custom_multichannels"]
)
}
stdout_write("\n".join(format_dict(d)))
context.validate_configuration()
return
if args.describe is not None:
if args.describe:
paramater_names = args.describe
all_names = context.list_parameters()
not_params = set(paramater_names) - set(all_names)
if not_params:
from ..exceptions import ArgumentError
from ..common.io import dashlist
raise ArgumentError(
"Invalid configuration parameters: %s" % dashlist(not_params)
)
if context.json:
stdout_write(
json.dumps(
[context.describe_parameter(name) for name in paramater_names],
sort_keys=True,
indent=2,
separators=(",", ": "),
cls=EntityEncoder,
)
)
else:
builder = []
builder.extend(
concat(
parameter_description_builder(name) for name in paramater_names
)
)
stdout_write("\n".join(builder))
else:
if context.json:
skip_categories = ("CLI-only", "Hidden and Undocumented")
paramater_names = sorted(
concat(
parameter_names
for category, parameter_names in context.category_map.items()
if category not in skip_categories
)
)
stdout_write(
json.dumps(
[context.describe_parameter(name) for name in paramater_names],
sort_keys=True,
indent=2,
separators=(",", ": "),
cls=EntityEncoder,
)
)
else:
stdout_write(describe_all_parameters())
return
if args.validate:
context.validate_all()
return
if args.system:
rc_path = sys_rc_path
elif args.env:
if "CONDA_PREFIX" in os.environ:
rc_path = join(os.environ["CONDA_PREFIX"], ".condarc")
else:
rc_path = user_rc_path
elif args.file:
rc_path = args.file
else:
rc_path = user_rc_path
if args.write_default:
if isfile(rc_path):
with open(rc_path) as fh:
data = fh.read().strip()
if data:
raise CondaError(
"The file '%s' "
"already contains configuration information.\n"
"Remove the file to proceed.\n"
"Use `conda config --describe` to display default configuration."
% rc_path
)
with open(rc_path, "w") as fh:
fh.write(describe_all_parameters())
return
# read existing condarc
if os.path.exists(rc_path):
with open(rc_path, "r") as fh:
rc_config = yaml_load(fh) or {}
else:
rc_config = {}
grouped_paramaters = groupby(
lambda p: context.describe_parameter(p)["parameter_type"],
context.list_parameters(),
)
primitive_parameters = grouped_paramaters["primitive"]
sequence_parameters = grouped_paramaters["sequence"]
map_parameters = grouped_paramaters["map"]
# Get
if args.get is not None:
context.validate_all()
if args.get == []:
args.get = sorted(rc_config.keys())
for key in args.get:
if key not in primitive_parameters + sequence_parameters:
message = "unknown key %s" % key
if not context.json:
stderr_write(message)
else:
json_warnings.append(message)
continue
if key not in rc_config:
continue
if context.json:
json_get[key] = rc_config[key]
continue
if isinstance(rc_config[key], (bool, string_types)):
stdout_write(" ".join(("--set", key, text_type(rc_config[key]))))
else: # assume the key is a list-type
# Note, since conda config --add prepends, these are printed in
# the reverse order so that entering them in this order will
# recreate the same file
items = rc_config.get(key, [])
numitems = len(items)
for q, item in enumerate(reversed(items)):
# Use repr so that it can be pasted back in to conda config --add
if key == "channels" and q in (0, numitems - 1):
stdout_write(
" ".join(
(
"--add",
key,
repr(item),
" # lowest priority"
if q == 0
else " # highest priority",
)
)
)
else:
stdout_write(" ".join(("--add", key, repr(item))))
if args.stdin:
content = timeout(5, sys.stdin.read)
if not content:
return
try:
parsed = yaml_load(content)
rc_config.update(parsed)
except Exception: # pragma: no cover
from ..exceptions import ParseError
raise ParseError("invalid yaml content:\n%s" % content)
# prepend, append, add
for arg, prepend in zip((args.prepend, args.append), (True, False)):
for key, item in arg:
if key == "channels" and key not in rc_config:
rc_config[key] = ["defaults"]
if key not in sequence_parameters:
from ..exceptions import CondaValueError
raise CondaValueError(
"Key '%s' is not a known sequence parameter." % key
)
if not (
isinstance(rc_config.get(key, []), Sequence)
and not isinstance(rc_config.get(key, []), string_types)
):
from ..exceptions import CouldntParseError
bad = rc_config[key].__class__.__name__
raise CouldntParseError("key %r should be a list, not %s." % (key, bad))
arglist = rc_config.setdefault(key, [])
if item in arglist:
# Right now, all list keys should not contain duplicates
message = "Warning: '%s' already in '%s' list, moving to the %s" % (
item,
key,
"top" if prepend else "bottom",
)
arglist = rc_config[key] = [p for p in arglist if p != item]
if not context.json:
stderr_write(message)
else:
json_warnings.append(message)
arglist.insert(0 if prepend else len(arglist), item)
# Set
for key, item in args.set:
key, subkey = key.split(".", 1) if "." in key else (key, None)
if key in primitive_parameters:
value = context.typify_parameter(key, item)
rc_config[key] = value
elif key in map_parameters:
argmap = rc_config.setdefault(key, {})
argmap[subkey] = item
else:
from ..exceptions import CondaValueError
raise CondaValueError("Key '%s' is not a known primitive parameter." % key)
# Remove
for key, item in args.remove:
key, subkey = key.split(".", 1) if "." in key else (key, None)
if key not in rc_config:
if key != "channels":
from ..exceptions import CondaKeyError
raise CondaKeyError(key, "key %r is not in the config file" % key)
rc_config[key] = ["defaults"]
if item not in rc_config[key]:
from ..exceptions import CondaKeyError
raise CondaKeyError(
key, "%r is not in the %r key of the config file" % (item, key)
)
rc_config[key] = [i for i in rc_config[key] if i != item]
# Remove Key
for (key,) in args.remove_key:
key, subkey = key.split(".", 1) if "." in key else (key, None)
if key not in rc_config:
from ..exceptions import CondaKeyError
raise CondaKeyError(key, "key %r is not in the config file" % key)
del rc_config[key]
# config.rc_keys
if not args.get:
# Add representers for enums.
# Because a representer cannot be added for the base Enum class (it must be added for
# each specific Enum subclass), and because of import rules), I don't know of a better
# location to do this.
def enum_representer(dumper, data):
return dumper.represent_str(str(data))
yaml.representer.RoundTripRepresenter.add_representer(
SafetyChecks, enum_representer
)
yaml.representer.RoundTripRepresenter.add_representer(
PathConflict, enum_representer
)
yaml.representer.RoundTripRepresenter.add_representer(
DepsModifier, enum_representer
)
yaml.representer.RoundTripRepresenter.add_representer(
UpdateModifier, enum_representer
)
yaml.representer.RoundTripRepresenter.add_representer(
ChannelPriority, enum_representer
)
yaml.representer.RoundTripRepresenter.add_representer(
SatSolverChoice, enum_representer
)
try:
with open(rc_path, "w") as rc:
rc.write(yaml_dump(rc_config))
except (IOError, OSError) as e:
raise CondaError(
"Cannot write to condarc file at %s\nCaused by %r" % (rc_path, e)
)
if context.json:
from .common import stdout_json_success
stdout_json_success(rc_path=rc_path, warnings=json_warnings, get=json_get)
return
|
def execute_config(args, parser):
stdout_write = getLogger("conda.stdout").info
stderr_write = getLogger("conda.stderr").info
json_warnings = []
json_get = {}
if args.show_sources:
if context.json:
stdout_write(
json.dumps(
context.collect_all(),
sort_keys=True,
indent=2,
separators=(",", ": "),
)
)
else:
lines = []
for source, reprs in iteritems(context.collect_all()):
lines.append("==> %s <==" % source)
lines.extend(format_dict(reprs))
lines.append("")
stdout_write("\n".join(lines))
return
if args.show is not None:
if args.show:
paramater_names = args.show
all_names = context.list_parameters()
not_params = set(paramater_names) - set(all_names)
if not_params:
from ..exceptions import ArgumentError
from ..common.io import dashlist
raise ArgumentError(
"Invalid configuration parameters: %s" % dashlist(not_params)
)
else:
paramater_names = context.list_parameters()
d = OrderedDict((key, getattr(context, key)) for key in paramater_names)
if context.json:
stdout_write(
json.dumps(
d,
sort_keys=True,
indent=2,
separators=(",", ": "),
cls=EntityEncoder,
)
)
else:
# Add in custom formatting
if "custom_channels" in d:
d["custom_channels"] = {
channel.name: "%s://%s" % (channel.scheme, channel.location)
for channel in itervalues(d["custom_channels"])
}
if "custom_multichannels" in d:
from ..common.io import dashlist
d["custom_multichannels"] = {
multichannel_name: dashlist(channels, indent=4)
for multichannel_name, channels in iteritems(
d["custom_multichannels"]
)
}
stdout_write("\n".join(format_dict(d)))
context.validate_configuration()
return
if args.describe is not None:
if args.describe:
paramater_names = args.describe
all_names = context.list_parameters()
not_params = set(paramater_names) - set(all_names)
if not_params:
from ..exceptions import ArgumentError
from ..common.io import dashlist
raise ArgumentError(
"Invalid configuration parameters: %s" % dashlist(not_params)
)
if context.json:
stdout_write(
json.dumps(
[context.describe_parameter(name) for name in paramater_names],
sort_keys=True,
indent=2,
separators=(",", ": "),
cls=EntityEncoder,
)
)
else:
builder = []
builder.extend(
concat(
parameter_description_builder(name) for name in paramater_names
)
)
stdout_write("\n".join(builder))
else:
if context.json:
skip_categories = ("CLI-only", "Hidden and Undocumented")
paramater_names = sorted(
concat(
parameter_names
for category, parameter_names in context.category_map.items()
if category not in skip_categories
)
)
stdout_write(
json.dumps(
[context.describe_parameter(name) for name in paramater_names],
sort_keys=True,
indent=2,
separators=(",", ": "),
cls=EntityEncoder,
)
)
else:
stdout_write(describe_all_parameters())
return
if args.validate:
context.validate_all()
return
if args.system:
rc_path = sys_rc_path
elif args.env:
if "CONDA_PREFIX" in os.environ:
rc_path = join(os.environ["CONDA_PREFIX"], ".condarc")
else:
rc_path = user_rc_path
elif args.file:
rc_path = args.file
else:
rc_path = user_rc_path
if args.write_default:
if isfile(rc_path):
with open(rc_path) as fh:
data = fh.read().strip()
if data:
raise CondaError(
"The file '%s' "
"already contains configuration information.\n"
"Remove the file to proceed.\n"
"Use `conda config --describe` to display default configuration."
% rc_path
)
with open(rc_path, "w") as fh:
fh.write(describe_all_parameters())
return
# read existing condarc
if os.path.exists(rc_path):
with open(rc_path, "r") as fh:
rc_config = yaml_load(fh) or {}
else:
rc_config = {}
grouped_paramaters = groupby(
lambda p: context.describe_parameter(p)["parameter_type"],
context.list_parameters(),
)
primitive_parameters = grouped_paramaters["primitive"]
sequence_parameters = grouped_paramaters["sequence"]
map_parameters = grouped_paramaters["map"]
# Get
if args.get is not None:
context.validate_all()
if args.get == []:
args.get = sorted(rc_config.keys())
for key in args.get:
if key not in primitive_parameters + sequence_parameters:
message = "unknown key %s" % key
if not context.json:
stderr_write(message)
else:
json_warnings.append(message)
continue
if key not in rc_config:
continue
if context.json:
json_get[key] = rc_config[key]
continue
if isinstance(rc_config[key], (bool, string_types)):
stdout_write(" ".join(("--set", key, text_type(rc_config[key]))))
else: # assume the key is a list-type
# Note, since conda config --add prepends, these are printed in
# the reverse order so that entering them in this order will
# recreate the same file
items = rc_config.get(key, [])
numitems = len(items)
for q, item in enumerate(reversed(items)):
# Use repr so that it can be pasted back in to conda config --add
if key == "channels" and q in (0, numitems - 1):
stdout_write(
" ".join(
(
"--add",
key,
repr(item),
" # lowest priority"
if q == 0
else " # highest priority",
)
)
)
else:
stdout_write(" ".join(("--add", key, repr(item))))
if args.stdin:
content = timeout(5, sys.stdin.read)
if not content:
return
try:
parsed = yaml_load(content)
rc_config.update(parsed)
except Exception: # pragma: no cover
from ..exceptions import ParseError
raise ParseError("invalid yaml content:\n%s" % content)
# prepend, append, add
for arg, prepend in zip((args.prepend, args.append), (True, False)):
for key, item in arg:
if key == "channels" and key not in rc_config:
rc_config[key] = ["defaults"]
if key not in sequence_parameters:
from ..exceptions import CondaValueError
raise CondaValueError(
"Key '%s' is not a known sequence parameter." % key
)
if not (
isinstance(rc_config.get(key, []), Sequence)
and not isinstance(rc_config.get(key, []), string_types)
):
from ..exceptions import CouldntParseError
bad = rc_config[key].__class__.__name__
raise CouldntParseError("key %r should be a list, not %s." % (key, bad))
arglist = rc_config.setdefault(key, [])
if item in arglist:
# Right now, all list keys should not contain duplicates
message = "Warning: '%s' already in '%s' list, moving to the %s" % (
item,
key,
"top" if prepend else "bottom",
)
arglist = rc_config[key] = [p for p in arglist if p != item]
if not context.json:
stderr_write(message)
else:
json_warnings.append(message)
arglist.insert(0 if prepend else len(arglist), item)
# Set
for key, item in args.set:
key, subkey = key.split(".", 1) if "." in key else (key, None)
if key in primitive_parameters:
value = context.typify_parameter(key, item)
rc_config[key] = value
elif key in map_parameters:
argmap = rc_config.setdefault(key, {})
argmap[subkey] = item
else:
from ..exceptions import CondaValueError
raise CondaValueError("Key '%s' is not a known primitive parameter." % key)
# Remove
for key, item in args.remove:
key, subkey = key.split(".", 1) if "." in key else (key, None)
if key not in rc_config:
if key != "channels":
from ..exceptions import CondaKeyError
raise CondaKeyError(key, "key %r is not in the config file" % key)
rc_config[key] = ["defaults"]
if item not in rc_config[key]:
from ..exceptions import CondaKeyError
raise CondaKeyError(
key, "%r is not in the %r key of the config file" % (item, key)
)
rc_config[key] = [i for i in rc_config[key] if i != item]
# Remove Key
for (key,) in args.remove_key:
key, subkey = key.split(".", 1) if "." in key else (key, None)
if key not in rc_config:
from ..exceptions import CondaKeyError
raise CondaKeyError(key, "key %r is not in the config file" % key)
del rc_config[key]
# config.rc_keys
if not args.get:
# Add representers for enums.
# Because a representer cannot be added for the base Enum class (it must be added for
# each specific Enum subclass), and because of import rules), I don't know of a better
# location to do this.
def enum_representer(dumper, data):
return dumper.represent_str(str(data))
yaml.representer.RoundTripRepresenter.add_representer(
SafetyChecks, enum_representer
)
yaml.representer.RoundTripRepresenter.add_representer(
PathConflict, enum_representer
)
yaml.representer.RoundTripRepresenter.add_representer(
DepsModifier, enum_representer
)
yaml.representer.RoundTripRepresenter.add_representer(
UpdateModifier, enum_representer
)
yaml.representer.RoundTripRepresenter.add_representer(
ChannelPriority, enum_representer
)
try:
with open(rc_path, "w") as rc:
rc.write(yaml_dump(rc_config))
except (IOError, OSError) as e:
raise CondaError(
"Cannot write to condarc file at %s\nCaused by %r" % (rc_path, e)
)
if context.json:
from .common import stdout_json_success
stdout_json_success(rc_path=rc_path, warnings=json_warnings, get=json_get)
return
|
https://github.com/conda/conda/issues/8176
|
error: RuntimeError('Could not run any SAT solver.')
command: C:\Tools\Progs\python\anaconda3\scripts\conda-script.py install -p C:\Tools\Progs\python\anaconda3 -y anaconda-client==1.7.2
user_agent: conda/4.6.1 requests/2.21.0 CPython/3.7.1 Windows/10 Windows/10.0.15063
_messageid: -9223372036617369659
_messagetime: 1548779675918 / 2019-01-29 10:34:35
Traceback (most recent call last):
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\exceptions.py", line 1001, in __call__
return func(*args, **kwargs)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\cli\main.py", line 84, in _main
exit_code = do_call(args, p)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\cli\conda_argparse.py", line 81, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\cli\main_install.py", line 21, in execute
install(args, parser, 'install')
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\cli\install.py", line 250, in install
force_reinstall=context.force_reinstall or context.force,
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\core\solve.py", line 107, in solve_for_transaction
force_remove, force_reinstall)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\core\solve.py", line 145, in solve_for_diff
force_remove)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\core\solve.py", line 240, in solve_final_state
ssc = self._find_inconsistent_packages(ssc)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\core\solve.py", line 342, in _find_inconsistent_packages
_, inconsistent_precs = ssc.r.bad_installed(ssc.solution_precs, ())
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\resolve.py", line 896, in bad_installed
C = r2.gen_clauses()
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\common\io.py", line 85, in decorated
return f(*args, **kwds)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\resolve.py", line 668, in gen_clauses
C = Clauses(sat_solver_cls=get_sat_solver_cls(context.sat_solver))
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\_vendor\auxlib\decorators.py", line 56, in _memoized_func
result = func(*args, **kwargs)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\common\logic.py", line 293, in get_sat_solver_cls
raise RuntimeError('Could not run any SAT solver.')
RuntimeError: Could not run any SAT solver.
|
RuntimeError
|
def get_sat_solver_cls(sat_solver_choice=SatSolverChoice.PYCOSAT):
solvers = odict(
[
(SatSolverChoice.PYCOSAT, PycoSatSolver),
(SatSolverChoice.PYCRYPTOSAT, CryptoMiniSatSolver),
(SatSolverChoice.PYSAT, PySatSolver),
]
)
cls = solvers[sat_solver_choice]
try:
cls().run(0)
except Exception as e:
log.warning(
"Could not run SAT solver through interface '%s'.", sat_solver_choice
)
log.debug("SAT interface error due to: %s", e, exc_info=True)
else:
log.debug("Using SAT solver interface '%s'.", sat_solver_choice)
return cls
for solver_choice, cls in solvers.items():
try:
cls().run(0)
except Exception as e:
log.debug(
"Attempted SAT interface '%s' but unavailable due to: %s",
sat_solver_choice,
e,
)
else:
log.debug("Falling back to SAT solver interface '%s'.", sat_solver_choice)
return cls
from ..exceptions import CondaDependencyError
raise CondaDependencyError(
"Cannot run solver. No functioning SAT implementations available."
)
|
def get_sat_solver_cls(name=None):
solvers = odict(
[
("pycosat", PycoSatSolver),
("pycryptosat", CryptoMiniSatSolver),
("pysat", PySatSolver),
]
)
if name is not None:
try:
cls = solvers[name]
except KeyError:
raise ValueError('Unknown SAT solver interface: "{}".'.format(name))
try:
cls().run(0)
except Exception:
raise RuntimeError(
'Could not run SAT solver through interface "{}".'.format(name)
)
else:
log.debug('Using SAT solver interface "{}".'.format(name))
return cls
for name, cls in solvers.items():
try:
cls().run(0)
except Exception:
log.warn('Could not run SAT solver through interface "{}".'.format(name))
else:
log.debug('Using SAT solver interface "{}".'.format(name))
return cls
raise RuntimeError("Could not run any SAT solver.")
|
https://github.com/conda/conda/issues/8176
|
error: RuntimeError('Could not run any SAT solver.')
command: C:\Tools\Progs\python\anaconda3\scripts\conda-script.py install -p C:\Tools\Progs\python\anaconda3 -y anaconda-client==1.7.2
user_agent: conda/4.6.1 requests/2.21.0 CPython/3.7.1 Windows/10 Windows/10.0.15063
_messageid: -9223372036617369659
_messagetime: 1548779675918 / 2019-01-29 10:34:35
Traceback (most recent call last):
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\exceptions.py", line 1001, in __call__
return func(*args, **kwargs)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\cli\main.py", line 84, in _main
exit_code = do_call(args, p)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\cli\conda_argparse.py", line 81, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\cli\main_install.py", line 21, in execute
install(args, parser, 'install')
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\cli\install.py", line 250, in install
force_reinstall=context.force_reinstall or context.force,
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\core\solve.py", line 107, in solve_for_transaction
force_remove, force_reinstall)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\core\solve.py", line 145, in solve_for_diff
force_remove)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\core\solve.py", line 240, in solve_final_state
ssc = self._find_inconsistent_packages(ssc)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\core\solve.py", line 342, in _find_inconsistent_packages
_, inconsistent_precs = ssc.r.bad_installed(ssc.solution_precs, ())
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\resolve.py", line 896, in bad_installed
C = r2.gen_clauses()
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\common\io.py", line 85, in decorated
return f(*args, **kwds)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\resolve.py", line 668, in gen_clauses
C = Clauses(sat_solver_cls=get_sat_solver_cls(context.sat_solver))
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\_vendor\auxlib\decorators.py", line 56, in _memoized_func
result = func(*args, **kwargs)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\common\logic.py", line 293, in get_sat_solver_cls
raise RuntimeError('Could not run any SAT solver.')
RuntimeError: Could not run any SAT solver.
|
RuntimeError
|
def category_map(self):
return odict(
(
(
"Channel Configuration",
(
"channels",
"channel_alias",
"default_channels",
"override_channels_enabled",
"whitelist_channels",
"custom_channels",
"custom_multichannels",
"migrated_channel_aliases",
"migrated_custom_channels",
"add_anaconda_token",
"allow_non_channel_urls",
),
),
(
"Basic Conda Configuration",
( # TODO: Is there a better category name here?
"envs_dirs",
"pkgs_dirs",
),
),
(
"Network Configuration",
(
"client_ssl_cert",
"client_ssl_cert_key",
"local_repodata_ttl",
"offline",
"proxy_servers",
"remote_connect_timeout_secs",
"remote_max_retries",
"remote_read_timeout_secs",
"ssl_verify",
),
),
(
"Solver Configuration",
(
"aggressive_update_packages",
"auto_update_conda",
"channel_priority",
"create_default_packages",
"disallowed_packages",
"pinned_packages",
"track_features",
"prune",
"force_reinstall",
),
),
(
"Package Linking and Install-time Configuration",
(
"allow_softlinks",
"always_copy",
"always_softlink",
"path_conflict",
"rollback_enabled",
"safety_checks",
"extra_safety_checks",
"shortcuts",
"non_admin_enabled",
),
),
(
"Conda-build Configuration",
(
"bld_path",
"croot",
"anaconda_upload",
"conda_build",
),
),
(
"Output, Prompt, and Flow Control Configuration",
(
"always_yes",
"auto_activate_base",
"changeps1",
"env_prompt",
"json",
"notify_outdated_conda",
"quiet",
"report_errors",
"show_channel_urls",
"verbosity",
),
),
(
"CLI-only",
(
"deps_modifier",
"update_modifier",
"force",
"force_remove",
"clobber",
"dry_run",
"download_only",
"ignore_pinned",
"use_index_cache",
"use_local",
),
),
(
"Hidden and Undocumented",
(
"allow_cycles", # allow cyclical dependencies, or raise
"allow_conda_downgrades",
"add_pip_as_python_dependency",
"debug",
"default_python",
"enable_private_envs",
"error_upload_url", # should remain undocumented
"featureless_minimization_disabled_feature_flag",
"force_32bit",
"pip_interop_enabled", # temporary feature flag
"root_prefix",
"sat_solver",
"solver_ignore_timestamps",
"subdir",
"subdirs",
# https://conda.io/docs/config.html#disable-updating-of-dependencies-update-dependencies # NOQA
# I don't think this documentation is correct any longer. # NOQA
"target_prefix_override",
# used to override prefix rewriting, for e.g. building docker containers or RPMs # NOQA
),
),
)
)
|
def category_map(self):
return odict(
(
(
"Channel Configuration",
(
"channels",
"channel_alias",
"default_channels",
"override_channels_enabled",
"whitelist_channels",
"custom_channels",
"custom_multichannels",
"migrated_channel_aliases",
"migrated_custom_channels",
"add_anaconda_token",
"allow_non_channel_urls",
),
),
(
"Basic Conda Configuration",
( # TODO: Is there a better category name here?
"env_prompt",
"envs_dirs",
"pkgs_dirs",
),
),
(
"Network Configuration",
(
"client_ssl_cert",
"client_ssl_cert_key",
"local_repodata_ttl",
"offline",
"proxy_servers",
"remote_connect_timeout_secs",
"remote_max_retries",
"remote_read_timeout_secs",
"ssl_verify",
),
),
(
"Solver Configuration",
(
"aggressive_update_packages",
"auto_update_conda",
"channel_priority",
"create_default_packages",
"disallowed_packages",
"pinned_packages",
"track_features",
"prune",
"force_reinstall",
),
),
(
"Package Linking and Install-time Configuration",
(
"allow_softlinks",
"always_copy",
"always_softlink",
"path_conflict",
"rollback_enabled",
"safety_checks",
"extra_safety_checks",
"shortcuts",
"non_admin_enabled",
),
),
(
"Conda-build Configuration",
(
"bld_path",
"croot",
"anaconda_upload",
"conda_build",
),
),
(
"Output, Prompt, and Flow Control Configuration",
(
"always_yes",
"auto_activate_base",
"changeps1",
"json",
"notify_outdated_conda",
"quiet",
"report_errors",
"show_channel_urls",
"verbosity",
),
),
(
"CLI-only",
(
"deps_modifier",
"update_modifier",
"force",
"force_remove",
"clobber",
"dry_run",
"download_only",
"ignore_pinned",
"use_index_cache",
"use_local",
),
),
(
"Hidden and Undocumented",
(
"allow_cycles", # allow cyclical dependencies, or raise
"allow_conda_downgrades",
"add_pip_as_python_dependency",
"debug",
"default_python",
"enable_private_envs",
"error_upload_url", # should remain undocumented
"featureless_minimization_disabled_feature_flag",
"force_32bit",
"pip_interop_enabled", # temporary feature flag
"root_prefix",
"sat_solver",
"solver_ignore_timestamps",
"subdir",
"subdirs",
# https://conda.io/docs/config.html#disable-updating-of-dependencies-update-dependencies # NOQA
# I don't think this documentation is correct any longer. # NOQA
"target_prefix_override",
# used to override prefix rewriting, for e.g. building docker containers or RPMs # NOQA
),
),
)
)
|
https://github.com/conda/conda/issues/8176
|
error: RuntimeError('Could not run any SAT solver.')
command: C:\Tools\Progs\python\anaconda3\scripts\conda-script.py install -p C:\Tools\Progs\python\anaconda3 -y anaconda-client==1.7.2
user_agent: conda/4.6.1 requests/2.21.0 CPython/3.7.1 Windows/10 Windows/10.0.15063
_messageid: -9223372036617369659
_messagetime: 1548779675918 / 2019-01-29 10:34:35
Traceback (most recent call last):
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\exceptions.py", line 1001, in __call__
return func(*args, **kwargs)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\cli\main.py", line 84, in _main
exit_code = do_call(args, p)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\cli\conda_argparse.py", line 81, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\cli\main_install.py", line 21, in execute
install(args, parser, 'install')
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\cli\install.py", line 250, in install
force_reinstall=context.force_reinstall or context.force,
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\core\solve.py", line 107, in solve_for_transaction
force_remove, force_reinstall)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\core\solve.py", line 145, in solve_for_diff
force_remove)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\core\solve.py", line 240, in solve_final_state
ssc = self._find_inconsistent_packages(ssc)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\core\solve.py", line 342, in _find_inconsistent_packages
_, inconsistent_precs = ssc.r.bad_installed(ssc.solution_precs, ())
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\resolve.py", line 896, in bad_installed
C = r2.gen_clauses()
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\common\io.py", line 85, in decorated
return f(*args, **kwds)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\resolve.py", line 668, in gen_clauses
C = Clauses(sat_solver_cls=get_sat_solver_cls(context.sat_solver))
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\_vendor\auxlib\decorators.py", line 56, in _memoized_func
result = func(*args, **kwargs)
File "C:\Tools\Progs\python\anaconda3\lib\site-packages\conda\common\logic.py", line 293, in get_sat_solver_cls
raise RuntimeError('Could not run any SAT solver.')
RuntimeError: Could not run any SAT solver.
|
RuntimeError
|
def _check_files(self):
"""Check the existence of mandatory files for a given distribution."""
for fname in self.MANDATORY_FILES:
if self._metadata_dir_full_path:
fpath = join(self._metadata_dir_full_path, fname)
if not isfile(fpath):
raise OSError(ENOENT, strerror(ENOENT), fpath)
|
def _check_files(self):
"""Check the existence of mandatory files for a given distribution."""
for fname in self.MANDATORY_FILES:
if self._metadata_dir_full_path:
fpath = join(self._metadata_dir_full_path, fname)
assert isfile(fpath)
|
https://github.com/conda/conda/issues/8178
|
error: AssertionError()
command: D:\Users\rahul\Anaconda3\Scripts\conda-script.py list
user_agent: conda/4.6.1 requests/2.18.4 CPython/3.6.5 Windows/10 Windows/10.0.17763
_messageid: -9223372036617369010
_messagetime: 1548792058544 / 2019-01-29 14:00:58
Traceback (most recent call last):
File "D:\Users\rahul\Anaconda3\lib\site-packages\conda\exceptions.py", line 1001, in __call__
return func(*args, **kwargs)
File "D:\Users\rahul\Anaconda3\lib\site-packages\conda\cli\main.py", line 84, in _main
exit_code = do_call(args, p)
File "D:\Users\rahul\Anaconda3\lib\site-packages\conda\cli\conda_argparse.py", line 81, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "D:\Users\rahul\Anaconda3\lib\site-packages\conda\cli\main_list.py", line 142, in execute
show_channel_urls=context.show_channel_urls)
File "D:\Users\rahul\Anaconda3\lib\site-packages\conda\cli\main_list.py", line 80, in print_packages
show_channel_urls=show_channel_urls)
File "D:\Users\rahul\Anaconda3\lib\site-packages\conda\cli\main_list.py", line 45, in list_packages
installed = sorted(PrefixData(prefix, pip_interop_enabled=True).iter_records(),
File "D:\Users\rahul\Anaconda3\lib\site-packages\conda\core\prefix_data.py", line 116, in iter_records
return itervalues(self._prefix_records)
File "D:\Users\rahul\Anaconda3\lib\site-packages\conda\core\prefix_data.py", line 145, in _prefix_records
return self.__prefix_records or self.load() or self.__prefix_records
File "D:\Users\rahul\Anaconda3\lib\site-packages\conda\core\prefix_data.py", line 69, in load
self._load_site_packages()
File "D:\Users\rahul\Anaconda3\lib\site-packages\conda\core\prefix_data.py", line 258, in _load_site_packages
python_record = read_python_record(self.prefix_path, af, python_pkg_record.version)
File "D:\Users\rahul\Anaconda3\lib\site-packages\conda\gateways\disk\read.py", line 245, in read_python_record
pydist = PythonDistribution.init(prefix_path, anchor_file, python_version)
File "D:\Users\rahul\Anaconda3\lib\site-packages\conda\common\pkg_formats\python.py", line 78, in init
return PythonInstalledDistribution(prefix_path, anchor_file, python_version)
File "D:\Users\rahul\Anaconda3\lib\site-packages\conda\common\pkg_formats\python.py", line 382, in __init__
super(PythonInstalledDistribution, self).__init__(anchor_full_path, python_version)
File "D:\Users\rahul\Anaconda3\lib\site-packages\conda\common\pkg_formats\python.py", line 106, in __init__
self._check_files()
File "D:\Users\rahul\Anaconda3\lib\site-packages\conda\common\pkg_formats\python.py", line 116, in _check_files
assert isfile(fpath)
AssertionError
|
AssertionError
|
def _load_site_packages(self):
"""
Load non-conda-installed python packages in the site-packages of the prefix.
Python packages not handled by conda are installed via other means,
like using pip or using python setup.py develop for local development.
Packages found that are not handled by conda are converted into a
prefix record and handled in memory.
Packages clobbering conda packages (i.e. the conda-meta record) are
removed from the in memory representation.
"""
python_pkg_record = self._python_pkg_record
if not python_pkg_record:
return {}
site_packages_dir = get_python_site_packages_short_path(python_pkg_record.version)
site_packages_path = join(self.prefix_path, win_path_ok(site_packages_dir))
if not isdir(site_packages_path):
return {}
# Get anchor files for corresponding conda (handled) python packages
prefix_graph = PrefixGraph(self.iter_records())
python_records = prefix_graph.all_descendants(python_pkg_record)
conda_python_packages = get_conda_anchor_files_and_records(python_records)
# Get all anchor files and compare against conda anchor files to find clobbered conda
# packages and python packages installed via other means (not handled by conda)
sp_anchor_files = get_site_packages_anchor_files(
site_packages_path, site_packages_dir
)
conda_anchor_files = set(conda_python_packages)
clobbered_conda_anchor_files = conda_anchor_files - sp_anchor_files
non_conda_anchor_files = sp_anchor_files - conda_anchor_files
# If there's a mismatch for anchor files between what conda expects for a package
# based on conda-meta, and for what is actually in site-packages, then we'll delete
# the in-memory record for the conda package. In the future, we should consider
# also deleting the record on disk in the conda-meta/ directory.
for conda_anchor_file in clobbered_conda_anchor_files:
prefix_rec = self._prefix_records.pop(
conda_python_packages[conda_anchor_file].name
)
try:
extracted_package_dir = basename(prefix_rec.extracted_package_dir)
except AttributeError:
extracted_package_dir = "-".join(
(prefix_rec.name, prefix_rec.version, prefix_rec.build)
)
prefix_rec_json_path = join(
self.prefix_path, "conda-meta", "%s.json" % extracted_package_dir
)
try:
rm_rf(prefix_rec_json_path)
except EnvironmentError:
log.debug(
"stale information, but couldn't remove: %s", prefix_rec_json_path
)
else:
log.debug("removed due to stale information: %s", prefix_rec_json_path)
# Create prefix records for python packages not handled by conda
new_packages = {}
for af in non_conda_anchor_files:
try:
python_record = read_python_record(
self.prefix_path, af, python_pkg_record.version
)
except EnvironmentError as e:
log.info("Python record ignored for anchor path '%s'\n due to %s", af, e)
continue
except ValidationError:
import sys
exc_type, exc_value, exc_traceback = sys.exc_info()
import traceback
tb = traceback.format_exception(exc_type, exc_value, exc_traceback)
log.warn(
"Problem reading non-conda package record at %s. Please verify that you "
"still need this, and if so, that this is still installed correctly. "
"Reinstalling this package may help.",
af,
)
log.debug("ValidationError: \n%s\n", "\n".join(tb))
continue
if not python_record:
continue
self.__prefix_records[python_record.name] = python_record
new_packages[python_record.name] = python_record
return new_packages
|
def _load_site_packages(self):
"""
Load non-conda-installed python packages in the site-packages of the prefix.
Python packages not handled by conda are installed via other means,
like using pip or using python setup.py develop for local development.
Packages found that are not handled by conda are converted into a
prefix record and handled in memory.
Packages clobbering conda packages (i.e. the conda-meta record) are
removed from the in memory representation.
"""
python_pkg_record = self._python_pkg_record
if not python_pkg_record:
return {}
site_packages_dir = get_python_site_packages_short_path(python_pkg_record.version)
site_packages_path = join(self.prefix_path, win_path_ok(site_packages_dir))
if not isdir(site_packages_path):
return {}
# Get anchor files for corresponding conda (handled) python packages
prefix_graph = PrefixGraph(self.iter_records())
python_records = prefix_graph.all_descendants(python_pkg_record)
conda_python_packages = get_conda_anchor_files_and_records(python_records)
# Get all anchor files and compare against conda anchor files to find clobbered conda
# packages and python packages installed via other means (not handled by conda)
sp_anchor_files = get_site_packages_anchor_files(
site_packages_path, site_packages_dir
)
conda_anchor_files = set(conda_python_packages)
clobbered_conda_anchor_files = conda_anchor_files - sp_anchor_files
non_conda_anchor_files = sp_anchor_files - conda_anchor_files
# If there's a mismatch for anchor files between what conda expects for a package
# based on conda-meta, and for what is actually in site-packages, then we'll delete
# the in-memory record for the conda package. In the future, we should consider
# also deleting the record on disk in the conda-meta/ directory.
for conda_anchor_file in clobbered_conda_anchor_files:
prefix_rec = self._prefix_records.pop(
conda_python_packages[conda_anchor_file].name
)
try:
extracted_package_dir = basename(prefix_rec.extracted_package_dir)
except AttributeError:
extracted_package_dir = "-".join(
(prefix_rec.name, prefix_rec.version, prefix_rec.build)
)
prefix_rec_json_path = join(
self.prefix_path, "conda-meta", "%s.json" % extracted_package_dir
)
try:
rm_rf(prefix_rec_json_path)
except EnvironmentError:
log.debug(
"stale information, but couldn't remove: %s", prefix_rec_json_path
)
else:
log.debug("removed due to stale information: %s", prefix_rec_json_path)
# Create prefix records for python packages not handled by conda
new_packages = {}
for af in non_conda_anchor_files:
try:
python_record = read_python_record(
self.prefix_path, af, python_pkg_record.version
)
except EnvironmentError:
continue
except ValidationError:
import sys
exc_type, exc_value, exc_traceback = sys.exc_info()
import traceback
tb = traceback.format_exception(exc_type, exc_value, exc_traceback)
log.warn(
"Problem reading non-conda package record at %s. Please verify that you "
"still need this, and if so, that this is still installed correctly. "
"Reinstalling this package may help.",
af,
)
log.debug("ValidationError: \n%s\n", "\n".join(tb))
continue
if not python_record:
continue
self.__prefix_records[python_record.name] = python_record
new_packages[python_record.name] = python_record
return new_packages
|
https://github.com/conda/conda/issues/8178
|
error: AssertionError()
command: D:\Users\rahul\Anaconda3\Scripts\conda-script.py list
user_agent: conda/4.6.1 requests/2.18.4 CPython/3.6.5 Windows/10 Windows/10.0.17763
_messageid: -9223372036617369010
_messagetime: 1548792058544 / 2019-01-29 14:00:58
Traceback (most recent call last):
File "D:\Users\rahul\Anaconda3\lib\site-packages\conda\exceptions.py", line 1001, in __call__
return func(*args, **kwargs)
File "D:\Users\rahul\Anaconda3\lib\site-packages\conda\cli\main.py", line 84, in _main
exit_code = do_call(args, p)
File "D:\Users\rahul\Anaconda3\lib\site-packages\conda\cli\conda_argparse.py", line 81, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "D:\Users\rahul\Anaconda3\lib\site-packages\conda\cli\main_list.py", line 142, in execute
show_channel_urls=context.show_channel_urls)
File "D:\Users\rahul\Anaconda3\lib\site-packages\conda\cli\main_list.py", line 80, in print_packages
show_channel_urls=show_channel_urls)
File "D:\Users\rahul\Anaconda3\lib\site-packages\conda\cli\main_list.py", line 45, in list_packages
installed = sorted(PrefixData(prefix, pip_interop_enabled=True).iter_records(),
File "D:\Users\rahul\Anaconda3\lib\site-packages\conda\core\prefix_data.py", line 116, in iter_records
return itervalues(self._prefix_records)
File "D:\Users\rahul\Anaconda3\lib\site-packages\conda\core\prefix_data.py", line 145, in _prefix_records
return self.__prefix_records or self.load() or self.__prefix_records
File "D:\Users\rahul\Anaconda3\lib\site-packages\conda\core\prefix_data.py", line 69, in load
self._load_site_packages()
File "D:\Users\rahul\Anaconda3\lib\site-packages\conda\core\prefix_data.py", line 258, in _load_site_packages
python_record = read_python_record(self.prefix_path, af, python_pkg_record.version)
File "D:\Users\rahul\Anaconda3\lib\site-packages\conda\gateways\disk\read.py", line 245, in read_python_record
pydist = PythonDistribution.init(prefix_path, anchor_file, python_version)
File "D:\Users\rahul\Anaconda3\lib\site-packages\conda\common\pkg_formats\python.py", line 78, in init
return PythonInstalledDistribution(prefix_path, anchor_file, python_version)
File "D:\Users\rahul\Anaconda3\lib\site-packages\conda\common\pkg_formats\python.py", line 382, in __init__
super(PythonInstalledDistribution, self).__init__(anchor_full_path, python_version)
File "D:\Users\rahul\Anaconda3\lib\site-packages\conda\common\pkg_formats\python.py", line 106, in __init__
self._check_files()
File "D:\Users\rahul\Anaconda3\lib\site-packages\conda\common\pkg_formats\python.py", line 116, in _check_files
assert isfile(fpath)
AssertionError
|
AssertionError
|
def create_file_link_actions(
cls, transaction_context, package_info, target_prefix, requested_link_type
):
def get_prefix_replace(source_path_data):
if source_path_data.path_type == PathType.softlink:
link_type = LinkType.copy
prefix_placehoder, file_mode = "", None
elif source_path_data.prefix_placeholder:
link_type = LinkType.copy
prefix_placehoder = source_path_data.prefix_placeholder
file_mode = source_path_data.file_mode
elif source_path_data.no_link:
link_type = LinkType.copy
prefix_placehoder, file_mode = "", None
else:
link_type = requested_link_type
prefix_placehoder, file_mode = "", None
return link_type, prefix_placehoder, file_mode
def make_file_link_action(source_path_data):
# TODO: this inner function is still kind of a mess
noarch = package_info.repodata_record.noarch
if noarch == NoarchType.python:
sp_dir = transaction_context["target_site_packages_short_path"]
if sp_dir is None:
raise CondaError(
"Unable to determine python site-packages "
"dir in target_prefix!\nPlease make sure "
"python is installed in %s" % target_prefix
)
target_short_path = get_python_noarch_target_path(
source_path_data.path, sp_dir
)
elif noarch is None or noarch == NoarchType.generic:
target_short_path = source_path_data.path
else:
raise CondaUpgradeError(
dals("""
The current version of conda is too old to install this package.
Please update conda.""")
)
link_type, placeholder, fmode = get_prefix_replace(source_path_data)
if placeholder:
return PrefixReplaceLinkAction(
transaction_context,
package_info,
package_info.extracted_package_dir,
source_path_data.path,
target_prefix,
target_short_path,
requested_link_type,
placeholder,
fmode,
source_path_data,
)
else:
return LinkPathAction(
transaction_context,
package_info,
package_info.extracted_package_dir,
source_path_data.path,
target_prefix,
target_short_path,
link_type,
source_path_data,
)
return tuple(make_file_link_action(spi) for spi in package_info.paths_data.paths)
|
def create_file_link_actions(
cls, transaction_context, package_info, target_prefix, requested_link_type
):
def get_prefix_replace(source_path_data):
if source_path_data.path_type == PathType.softlink:
link_type = LinkType.copy
prefix_placehoder, file_mode = "", None
elif source_path_data.prefix_placeholder:
link_type = LinkType.copy
prefix_placehoder = source_path_data.prefix_placeholder
file_mode = source_path_data.file_mode
elif source_path_data.no_link:
link_type = LinkType.copy
prefix_placehoder, file_mode = "", None
else:
link_type = requested_link_type
prefix_placehoder, file_mode = "", None
return link_type, prefix_placehoder, file_mode
def make_file_link_action(source_path_data):
# TODO: this inner function is still kind of a mess
noarch = package_info.repodata_record.noarch
if noarch == NoarchType.python:
sp_dir = transaction_context["target_site_packages_short_path"]
target_short_path = get_python_noarch_target_path(
source_path_data.path, sp_dir
)
elif noarch is None or noarch == NoarchType.generic:
target_short_path = source_path_data.path
else:
raise CondaUpgradeError(
dals("""
The current version of conda is too old to install this package.
Please update conda.""")
)
link_type, placeholder, fmode = get_prefix_replace(source_path_data)
if placeholder:
return PrefixReplaceLinkAction(
transaction_context,
package_info,
package_info.extracted_package_dir,
source_path_data.path,
target_prefix,
target_short_path,
requested_link_type,
placeholder,
fmode,
source_path_data,
)
else:
return LinkPathAction(
transaction_context,
package_info,
package_info.extracted_package_dir,
source_path_data.path,
target_prefix,
target_short_path,
link_type,
source_path_data,
)
return tuple(make_file_link_action(spi) for spi in package_info.paths_data.paths)
|
https://github.com/conda/conda/issues/5588
|
conda install ../conda/bokeh-0.12.7dev3-py_0-noarch.tar.bz2 -p /Users/hsparra/milestone1_py36An unexpected error has occurred.
Please consider posting the following information to the
conda GitHub issue tracker at:
https://github.com/conda/conda/issues
Current conda install:
platform : osx-64
conda version : 4.3.21
conda is private : False
conda-env version : 4.3.21
conda-build version : 2.1.15
python version : 3.5.2.final.0
requests version : 2.12.4
root environment : /Users/hsparra/anaconda (writable)
default environment : /Users/hsparra/milestone1_py36
envs directories : /Users/hsparra/anaconda/envs
/Users/hsparra/.conda/envs
package cache : /Users/hsparra/anaconda/pkgs
/Users/hsparra/.conda/pkgs
channel URLs : https://conda.anaconda.org/bokeh/c/dev/osx-64
https://conda.anaconda.org/bokeh/c/dev/noarch
https://conda.anaconda.org/anaconda/osx-64
https://conda.anaconda.org/anaconda/noarch
https://repo.continuum.io/pkgs/free/osx-64
https://repo.continuum.io/pkgs/free/noarch
https://repo.continuum.io/pkgs/r/osx-64
https://repo.continuum.io/pkgs/r/noarch
https://repo.continuum.io/pkgs/pro/osx-64
https://repo.continuum.io/pkgs/pro/noarch
https://conda.anaconda.org/conda-forge/osx-64
https://conda.anaconda.org/conda-forge/noarch
https://conda.anaconda.org/anaconda-fusion/osx-64
https://conda.anaconda.org/anaconda-fusion/noarch
https://conda.anaconda.org/anaconda-mosaic/osx-64
https://conda.anaconda.org/anaconda-mosaic/noarch
https://conda.anaconda.org/quanyuan/osx-64
https://conda.anaconda.org/quanyuan/noarch
config file : /Users/hsparra/.condarc
netrc file : None
offline mode : False
user-agent : conda/4.3.21 requests/2.12.4 CPython/3.5.2 Darwin/16.6.0 OSX/10.12.5
UID:GID : 503:20
$ /Users/hsparra/milestone1_py36/bin/conda install ../conda/bokeh-0.12.7dev3-py_0-noarch.tar.bz2 -p /Users/hsparra/milestone1_py36`
Traceback (most recent call last):
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/exceptions.py", line 632, in conda_exception_handler
return_value = func(*args, **kwargs)
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/cli/main.py", line 137, in _main
exit_code = args.func(args, p)
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/cli/main_install.py", line 80, in execute
install(args, parser, 'install')
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/cli/install.py", line 199, in install
explicit(args_packages, prefix, verbose=not context.quiet)
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/misc.py", line 110, in explicit
execute_actions(actions, index, verbose=verbose)
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/plan.py", line 830, in execute_actions
execute_instructions(plan, index, verbose)
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/instructions.py", line 247, in execute_instructions
cmd(state, arg)
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/instructions.py", line 108, in UNLINKLINKTRANSACTION_CMD
txn.execute()
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/core/link.py", line 263, in execute
self.verify()
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/core/link.py", line 242, in verify
self.prepare()
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/core/link.py", line 173, in prepare
concatv(unlink_actions, link_actions))
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/core/link.py", line 172, in <genexpr>
self.all_actions = tuple(per_pkg_actions for per_pkg_actions in
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/core/link.py", line 169, in <genexpr>
for pkg_info, lt in zip(self.packages_info_to_link, link_types)
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/core/link.py", line 406, in make_link_actions
file_link_actions = LinkPathAction.create_file_link_actions(*required_quad)
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/core/path_actions.py", line 181, in create_file_link_actions
return tuple(make_file_link_action(spi) for spi in package_info.paths_data.paths)
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/core/path_actions.py", line 181, in <genexpr>
return tuple(make_file_link_action(spi) for spi in package_info.paths_data.paths)
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/core/path_actions.py", line 161, in make_file_link_action
target_short_path = get_python_noarch_target_path(source_path_info.path, sp_dir)
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/common/path.py", line 238, in get_python_noarch_target_path
return source_short_path.replace('site-packages', sp_dir, 1)
TypeError: Can't convert 'NoneType' object to str implicitly`
|
TypeError
|
def make_file_link_action(source_path_data):
# TODO: this inner function is still kind of a mess
noarch = package_info.repodata_record.noarch
if noarch == NoarchType.python:
sp_dir = transaction_context["target_site_packages_short_path"]
if sp_dir is None:
raise CondaError(
"Unable to determine python site-packages "
"dir in target_prefix!\nPlease make sure "
"python is installed in %s" % target_prefix
)
target_short_path = get_python_noarch_target_path(source_path_data.path, sp_dir)
elif noarch is None or noarch == NoarchType.generic:
target_short_path = source_path_data.path
else:
raise CondaUpgradeError(
dals("""
The current version of conda is too old to install this package.
Please update conda.""")
)
link_type, placeholder, fmode = get_prefix_replace(source_path_data)
if placeholder:
return PrefixReplaceLinkAction(
transaction_context,
package_info,
package_info.extracted_package_dir,
source_path_data.path,
target_prefix,
target_short_path,
requested_link_type,
placeholder,
fmode,
source_path_data,
)
else:
return LinkPathAction(
transaction_context,
package_info,
package_info.extracted_package_dir,
source_path_data.path,
target_prefix,
target_short_path,
link_type,
source_path_data,
)
|
def make_file_link_action(source_path_data):
# TODO: this inner function is still kind of a mess
noarch = package_info.repodata_record.noarch
if noarch == NoarchType.python:
sp_dir = transaction_context["target_site_packages_short_path"]
target_short_path = get_python_noarch_target_path(source_path_data.path, sp_dir)
elif noarch is None or noarch == NoarchType.generic:
target_short_path = source_path_data.path
else:
raise CondaUpgradeError(
dals("""
The current version of conda is too old to install this package.
Please update conda.""")
)
link_type, placeholder, fmode = get_prefix_replace(source_path_data)
if placeholder:
return PrefixReplaceLinkAction(
transaction_context,
package_info,
package_info.extracted_package_dir,
source_path_data.path,
target_prefix,
target_short_path,
requested_link_type,
placeholder,
fmode,
source_path_data,
)
else:
return LinkPathAction(
transaction_context,
package_info,
package_info.extracted_package_dir,
source_path_data.path,
target_prefix,
target_short_path,
link_type,
source_path_data,
)
|
https://github.com/conda/conda/issues/5588
|
conda install ../conda/bokeh-0.12.7dev3-py_0-noarch.tar.bz2 -p /Users/hsparra/milestone1_py36An unexpected error has occurred.
Please consider posting the following information to the
conda GitHub issue tracker at:
https://github.com/conda/conda/issues
Current conda install:
platform : osx-64
conda version : 4.3.21
conda is private : False
conda-env version : 4.3.21
conda-build version : 2.1.15
python version : 3.5.2.final.0
requests version : 2.12.4
root environment : /Users/hsparra/anaconda (writable)
default environment : /Users/hsparra/milestone1_py36
envs directories : /Users/hsparra/anaconda/envs
/Users/hsparra/.conda/envs
package cache : /Users/hsparra/anaconda/pkgs
/Users/hsparra/.conda/pkgs
channel URLs : https://conda.anaconda.org/bokeh/c/dev/osx-64
https://conda.anaconda.org/bokeh/c/dev/noarch
https://conda.anaconda.org/anaconda/osx-64
https://conda.anaconda.org/anaconda/noarch
https://repo.continuum.io/pkgs/free/osx-64
https://repo.continuum.io/pkgs/free/noarch
https://repo.continuum.io/pkgs/r/osx-64
https://repo.continuum.io/pkgs/r/noarch
https://repo.continuum.io/pkgs/pro/osx-64
https://repo.continuum.io/pkgs/pro/noarch
https://conda.anaconda.org/conda-forge/osx-64
https://conda.anaconda.org/conda-forge/noarch
https://conda.anaconda.org/anaconda-fusion/osx-64
https://conda.anaconda.org/anaconda-fusion/noarch
https://conda.anaconda.org/anaconda-mosaic/osx-64
https://conda.anaconda.org/anaconda-mosaic/noarch
https://conda.anaconda.org/quanyuan/osx-64
https://conda.anaconda.org/quanyuan/noarch
config file : /Users/hsparra/.condarc
netrc file : None
offline mode : False
user-agent : conda/4.3.21 requests/2.12.4 CPython/3.5.2 Darwin/16.6.0 OSX/10.12.5
UID:GID : 503:20
$ /Users/hsparra/milestone1_py36/bin/conda install ../conda/bokeh-0.12.7dev3-py_0-noarch.tar.bz2 -p /Users/hsparra/milestone1_py36`
Traceback (most recent call last):
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/exceptions.py", line 632, in conda_exception_handler
return_value = func(*args, **kwargs)
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/cli/main.py", line 137, in _main
exit_code = args.func(args, p)
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/cli/main_install.py", line 80, in execute
install(args, parser, 'install')
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/cli/install.py", line 199, in install
explicit(args_packages, prefix, verbose=not context.quiet)
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/misc.py", line 110, in explicit
execute_actions(actions, index, verbose=verbose)
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/plan.py", line 830, in execute_actions
execute_instructions(plan, index, verbose)
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/instructions.py", line 247, in execute_instructions
cmd(state, arg)
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/instructions.py", line 108, in UNLINKLINKTRANSACTION_CMD
txn.execute()
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/core/link.py", line 263, in execute
self.verify()
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/core/link.py", line 242, in verify
self.prepare()
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/core/link.py", line 173, in prepare
concatv(unlink_actions, link_actions))
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/core/link.py", line 172, in <genexpr>
self.all_actions = tuple(per_pkg_actions for per_pkg_actions in
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/core/link.py", line 169, in <genexpr>
for pkg_info, lt in zip(self.packages_info_to_link, link_types)
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/core/link.py", line 406, in make_link_actions
file_link_actions = LinkPathAction.create_file_link_actions(*required_quad)
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/core/path_actions.py", line 181, in create_file_link_actions
return tuple(make_file_link_action(spi) for spi in package_info.paths_data.paths)
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/core/path_actions.py", line 181, in <genexpr>
return tuple(make_file_link_action(spi) for spi in package_info.paths_data.paths)
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/core/path_actions.py", line 161, in make_file_link_action
target_short_path = get_python_noarch_target_path(source_path_info.path, sp_dir)
File "/Users/hsparra/anaconda/lib/python3.5/site-packages/conda/common/path.py", line 238, in get_python_noarch_target_path
return source_short_path.replace('site-packages', sp_dir, 1)
TypeError: Can't convert 'NoneType' object to str implicitly`
|
TypeError
|
def _read_windows_registry(target_path): # pragma: no cover
# HKEY_LOCAL_MACHINE\Software\Microsoft\Command Processor\AutoRun
# HKEY_CURRENT_USER\Software\Microsoft\Command Processor\AutoRun
# returns value_value, value_type -or- None, None if target does not exist
main_key, the_rest = target_path.split("\\", 1)
subkey_str, value_name = the_rest.rsplit("\\", 1)
main_key = getattr(winreg, main_key)
try:
key = winreg.OpenKey(main_key, subkey_str, 0, winreg.KEY_READ)
except EnvironmentError as e:
if e.errno != ENOENT:
raise
return None, None
try:
value_tuple = winreg.QueryValueEx(key, value_name)
value_value = value_tuple[0]
if isinstance(value_value, str):
value_value = value_value.strip()
value_type = value_tuple[1]
return value_value, value_type
except Exception:
# [WinError 2] The system cannot find the file specified
winreg.CloseKey(key)
return None, None
finally:
winreg.CloseKey(key)
|
def _read_windows_registry(target_path): # pragma: no cover
# HKEY_LOCAL_MACHINE\Software\Microsoft\Command Processor\AutoRun
# HKEY_CURRENT_USER\Software\Microsoft\Command Processor\AutoRun
# returns value_value, value_type -or- None, None if target does not exist
main_key, the_rest = target_path.split("\\", 1)
subkey_str, value_name = the_rest.rsplit("\\", 1)
main_key = getattr(winreg, main_key)
try:
key = winreg.OpenKey(main_key, subkey_str, 0, winreg.KEY_READ)
except EnvironmentError as e:
if e.errno != ENOENT:
raise
return None, None
try:
value_tuple = winreg.QueryValueEx(key, value_name)
value_value = value_tuple[0].strip()
value_type = value_tuple[1]
return value_value, value_type
except Exception:
# [WinError 2] The system cannot find the file specified
winreg.CloseKey(key)
return None, None
finally:
winreg.CloseKey(key)
|
https://github.com/conda/conda/issues/7952
|
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "c:\users\wani\downloads\repos\conda\conda\exceptions.py", line 1001, in __call__
return func(*args, **kwargs)
File "c:\users\wani\downloads\repos\conda\conda\cli\main.py", line 84, in _main
exit_code = do_call(args, p)
File "c:\users\wani\downloads\repos\conda\conda\cli\conda_argparse.py", line 81, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "c:\users\wani\downloads\repos\conda\conda\cli\main_init.py", line 52, in execute
anaconda_prompt)
File "c:\users\wani\downloads\repos\conda\conda\core\initialize.py", line 106, in initialize
run_plan(plan2)
File "c:\users\wani\downloads\repos\conda\conda\core\initialize.py", line 552, in run_plan
result = globals()[step['function']](*step.get('args', ()), **step.get('kwargs', {}))
File "c:\users\wani\downloads\repos\conda\conda\core\initialize.py", line 1196, in init_long_path
_write_windows_registry(target_path, "1", winreg.REG_DWORD)
File "c:\users\wani\downloads\repos\conda\conda\core\initialize.py", line 1143, in _write_windows_registry
winreg.SetValueEx(key, value_name, 0, value_type, value_value)
ValueError: Could not convert the data to the specified type.
`$ C:\ProgramData\MinicondaX\Scripts\conda-script.py init --system cmd.exe`
|
ValueError
|
def init_long_path(target_path):
win_ver, _, win_rev = context.os_distribution_name_version[1].split(".")
# win10, build 14352 was the first preview release that supported this
if int(win_ver) >= 10 and int(win_rev) >= 14352:
prev_value, value_type = _read_windows_registry(target_path)
if str(prev_value) != "1":
if context.verbosity:
print("\n")
print(target_path)
print(make_diff(str(prev_value), "1"))
if not context.dry_run:
_write_windows_registry(target_path, 1, winreg.REG_DWORD)
return Result.MODIFIED
else:
return Result.NO_CHANGE
else:
if context.verbosity:
print("\n")
print(
"Not setting long path registry key; Windows version must be at least 10 with "
'the fall 2016 "Anniversary update" or newer.'
)
return Result.NO_CHANGE
|
def init_long_path(target_path):
win_ver, _, win_rev = context.os_distribution_name_version[1].split(".")
# win10, build 14352 was the first preview release that supported this
if int(win_ver) >= 10 and int(win_rev) >= 14352:
prev_value, value_type = _read_windows_registry(target_path)
if prev_value != "1":
if context.verbosity:
print("\n")
print(target_path)
print(make_diff(prev_value, "1"))
if not context.dry_run:
_write_windows_registry(target_path, "1", winreg.REG_DWORD)
return Result.MODIFIED
else:
return Result.NO_CHANGE
else:
if context.verbosity:
print("\n")
print(
"Not setting long path registry key; Windows version must be at least 10 with "
'the fall 2016 "Anniversary update" or newer.'
)
return Result.NO_CHANGE
|
https://github.com/conda/conda/issues/7952
|
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "c:\users\wani\downloads\repos\conda\conda\exceptions.py", line 1001, in __call__
return func(*args, **kwargs)
File "c:\users\wani\downloads\repos\conda\conda\cli\main.py", line 84, in _main
exit_code = do_call(args, p)
File "c:\users\wani\downloads\repos\conda\conda\cli\conda_argparse.py", line 81, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "c:\users\wani\downloads\repos\conda\conda\cli\main_init.py", line 52, in execute
anaconda_prompt)
File "c:\users\wani\downloads\repos\conda\conda\core\initialize.py", line 106, in initialize
run_plan(plan2)
File "c:\users\wani\downloads\repos\conda\conda\core\initialize.py", line 552, in run_plan
result = globals()[step['function']](*step.get('args', ()), **step.get('kwargs', {}))
File "c:\users\wani\downloads\repos\conda\conda\core\initialize.py", line 1196, in init_long_path
_write_windows_registry(target_path, "1", winreg.REG_DWORD)
File "c:\users\wani\downloads\repos\conda\conda\core\initialize.py", line 1143, in _write_windows_registry
winreg.SetValueEx(key, value_name, 0, value_type, value_value)
ValueError: Could not convert the data to the specified type.
`$ C:\ProgramData\MinicondaX\Scripts\conda-script.py init --system cmd.exe`
|
ValueError
|
def _load_site_packages(self):
"""
Load non-conda-installed python packages in the site-packages of the prefix.
Python packages not handled by conda are installed via other means,
like using pip or using python setup.py develop for local development.
Packages found that are not handled by conda are converted into a
prefix record and handled in memory.
Packages clobbering conda packages (i.e. the conda-meta record) are
removed from the in memory representation.
"""
python_pkg_record = self._python_pkg_record
if not python_pkg_record:
return {}
site_packages_dir = get_python_site_packages_short_path(python_pkg_record.version)
site_packages_path = join(self.prefix_path, win_path_ok(site_packages_dir))
if not isdir(site_packages_path):
return {}
# Get anchor files for corresponding conda (handled) python packages
prefix_graph = PrefixGraph(self.iter_records())
python_records = prefix_graph.all_descendants(python_pkg_record)
conda_python_packages = get_conda_anchor_files_and_records(python_records)
# Get all anchor files and compare against conda anchor files to find clobbered conda
# packages and python packages installed via other means (not handled by conda)
sp_anchor_files = get_site_packages_anchor_files(
site_packages_path, site_packages_dir
)
conda_anchor_files = set(conda_python_packages)
clobbered_conda_anchor_files = conda_anchor_files - sp_anchor_files
non_conda_anchor_files = sp_anchor_files - conda_anchor_files
# If there's a mismatch for anchor files between what conda expects for a package
# based on conda-meta, and for what is actually in site-packages, then we'll delete
# the in-memory record for the conda package. In the future, we should consider
# also deleting the record on disk in the conda-meta/ directory.
for conda_anchor_file in clobbered_conda_anchor_files:
prefix_rec = self._prefix_records.pop(
conda_python_packages[conda_anchor_file].name
)
try:
extracted_package_dir = basename(prefix_rec.extracted_package_dir)
except AttributeError:
extracted_package_dir = "-".join(
(prefix_rec.name, prefix_rec.version, prefix_rec.build)
)
prefix_rec_json_path = join(
self.prefix_path, "conda-meta", "%s.json" % extracted_package_dir
)
try:
rm_rf(prefix_rec_json_path)
except EnvironmentError:
log.debug(
"stale information, but couldn't remove: %s", prefix_rec_json_path
)
else:
log.debug("removed due to stale information: %s", prefix_rec_json_path)
# Create prefix records for python packages not handled by conda
new_packages = {}
for af in non_conda_anchor_files:
try:
python_record = read_python_record(
self.prefix_path, af, python_pkg_record.version
)
except EnvironmentError:
continue
except ValidationError:
import sys
exc_type, exc_value, exc_traceback = sys.exc_info()
import traceback
tb = traceback.format_exception(exc_type, exc_value, exc_traceback)
log.warn(
"Problem reading non-conda package record at %s. Please verify that you "
"still need this, and if so, that this is still installed correctly. "
"Reinstalling this package may help.",
af,
)
log.debug("ValidationError: \n%s\n", "\n".join(tb))
continue
if not python_record:
continue
self.__prefix_records[python_record.name] = python_record
new_packages[python_record.name] = python_record
return new_packages
|
def _load_site_packages(self):
"""
Load non-conda-installed python packages in the site-packages of the prefix.
Python packages not handled by conda are installed via other means,
like using pip or using python setup.py develop for local development.
Packages found that are not handled by conda are converted into a
prefix record and handled in memory.
Packages clobbering conda packages (i.e. the conda-meta record) are
removed from the in memory representation.
"""
python_pkg_record = self._python_pkg_record
if not python_pkg_record:
return {}
site_packages_dir = get_python_site_packages_short_path(python_pkg_record.version)
site_packages_path = join(self.prefix_path, win_path_ok(site_packages_dir))
if not isdir(site_packages_path):
return {}
# Get anchor files for corresponding conda (handled) python packages
prefix_graph = PrefixGraph(self.iter_records())
python_records = prefix_graph.all_descendants(python_pkg_record)
conda_python_packages = get_conda_anchor_files_and_records(python_records)
# Get all anchor files and compare against conda anchor files to find clobbered conda
# packages and python packages installed via other means (not handled by conda)
sp_anchor_files = get_site_packages_anchor_files(
site_packages_path, site_packages_dir
)
conda_anchor_files = set(conda_python_packages)
clobbered_conda_anchor_files = conda_anchor_files - sp_anchor_files
non_conda_anchor_files = sp_anchor_files - conda_anchor_files
# If there's a mismatch for anchor files between what conda expects for a package
# based on conda-meta, and for what is actually in site-packages, then we'll delete
# the in-memory record for the conda package. In the future, we should consider
# also deleting the record on disk in the conda-meta/ directory.
for conda_anchor_file in clobbered_conda_anchor_files:
prefix_rec = self._prefix_records.pop(
conda_python_packages[conda_anchor_file].name
)
try:
extracted_package_dir = basename(prefix_rec.extracted_package_dir)
except AttributeError:
extracted_package_dir = "-".join(
(prefix_rec.name, prefix_rec.version, prefix_rec.build)
)
prefix_rec_json_path = join(
self.prefix_path, "conda-meta", "%s.json" % extracted_package_dir
)
try:
rm_rf(prefix_rec_json_path)
except EnvironmentError:
log.debug(
"stale information, but couldn't remove: %s", prefix_rec_json_path
)
else:
log.debug("removed due to stale information: %s", prefix_rec_json_path)
# Create prefix records for python packages not handled by conda
new_packages = {}
for af in non_conda_anchor_files:
try:
python_record = read_python_record(
self.prefix_path, af, python_pkg_record.version
)
except EnvironmentError:
continue
if not python_record:
continue
self.__prefix_records[python_record.name] = python_record
new_packages[python_record.name] = python_record
return new_packages
|
https://github.com/conda/conda/issues/7914
|
Traceback (most recent call last):
File "/Users/msarahan/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 1001, in __call__
return func(*args, **kwargs)
File "/Users/msarahan/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 84, in _main
exit_code = do_call(args, p)
File "/Users/msarahan/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 81, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/Users/msarahan/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 21, in execute
install(args, parser, 'install')
File "/Users/msarahan/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 250, in install
force_reinstall=context.force_reinstall or context.force,
File "/Users/msarahan/miniconda3/lib/python3.6/site-packages/conda/core/solve.py", line 107, in solve_for_transaction
force_remove, force_reinstall)
File "/Users/msarahan/miniconda3/lib/python3.6/site-packages/conda/core/solve.py", line 145, in solve_for_diff
force_remove)
File "/Users/msarahan/miniconda3/lib/python3.6/site-packages/conda/core/solve.py", line 206, in solve_final_state
self.prefix, update_modifier, deps_modifier, prune, ignore_pinned, force_remove
File "/Users/msarahan/miniconda3/lib/python3.6/site-packages/conda/core/solve.py", line 729, in __init__
self.solution_precs = tuple(self.prefix_data.iter_records())
File "/Users/msarahan/miniconda3/lib/python3.6/site-packages/conda/core/prefix_data.py", line 115, in iter_records
return itervalues(self._prefix_records)
File "/Users/msarahan/miniconda3/lib/python3.6/site-packages/conda/core/prefix_data.py", line 144, in _prefix_records
return self.__prefix_records or self.load() or self.__prefix_records
File "/Users/msarahan/miniconda3/lib/python3.6/site-packages/conda/core/prefix_data.py", line 68, in load
self._load_site_packages()
File "/Users/msarahan/miniconda3/lib/python3.6/site-packages/conda/core/prefix_data.py", line 257, in _load_site_packages
python_record = read_python_record(self.prefix_path, af, python_pkg_record.version)
File "/Users/msarahan/miniconda3/lib/python3.6/site-packages/conda/gateways/disk/read.py", line 298, in read_python_record
constrains=constrains,
File "/Users/msarahan/miniconda3/lib/python3.6/site-packages/conda/_vendor/auxlib/entity.py", line 719, in __call__
instance = super(EntityType, cls).__call__(*args, **kwargs)
File "/Users/msarahan/miniconda3/lib/python3.6/site-packages/conda/_vendor/auxlib/entity.py", line 736, in __init__
setattr(self, key, kwargs[key])
File "/Users/msarahan/miniconda3/lib/python3.6/site-packages/conda/_vendor/auxlib/entity.py", line 427, in __set__
instance.__dict__[self.name] = self.validate(instance, self.box(instance, instance.__class__, val))
File "/Users/msarahan/miniconda3/lib/python3.6/site-packages/conda/_vendor/auxlib/entity.py", line 470, in validate
raise ValidationError(getattr(self, 'name', 'undefined name'), val)
conda._vendor.auxlib.exceptions.ValidationError: Value for version cannot be None.
|
conda._vendor.auxlib.exceptions.ValidationError
|
def make_raw_parameters_from_file(cls, filepath):
with open(filepath, "r") as fh:
try:
ruamel_yaml = yaml_load(fh)
except ScannerError as err:
mark = err.problem_mark
raise ConfigurationLoadError(
filepath,
" reason: invalid yaml at line %(line)s, column %(column)s",
line=mark.line,
column=mark.column,
)
except ReaderError as err:
raise ConfigurationLoadError(
filepath,
" reason: invalid yaml at position %(position)s",
position=err.position,
)
return cls.make_raw_parameters(filepath, ruamel_yaml) or EMPTY_MAP
|
def make_raw_parameters_from_file(cls, filepath):
with open(filepath, "r") as fh:
try:
ruamel_yaml = yaml_load(fh)
except ScannerError as err:
mark = err.problem_mark
raise LoadError("Invalid YAML", filepath, mark.line, mark.column)
return cls.make_raw_parameters(filepath, ruamel_yaml) or EMPTY_MAP
|
https://github.com/conda/conda/issues/7242
|
Traceback (most recent call last):
File "C:\Users\Subham\Anaconda3\lib\site-packages\conda\cli\main.py", line 97, in main
from ..activate import main as activator_main
File "C:\Users\Subham\Anaconda3\lib\site-packages\conda\activate.py", line 12, in <module>
context.__init__() # oOn import, context does not include SEARCH_PATH. This line fixes that.
File "C:\Users\Subham\Anaconda3\lib\site-packages\conda\base\context.py", line 236, in __init__
argparse_args=argparse_args)
File "C:\Users\Subham\Anaconda3\lib\site-packages\conda\common\configuration.py", line 722, in __init__
self._set_search_path(search_path)
File "C:\Users\Subham\Anaconda3\lib\site-packages\conda\common\configuration.py", line 728, in _set_search_path
self._set_raw_data(load_file_configs(search_path))
File "C:\Users\Subham\Anaconda3\lib\site-packages\conda\common\configuration.py", line 369, in load_file_configs
raw_data = odict(kv for kv in chain.from_iterable(load_paths))
File "C:\Users\Subham\Anaconda3\lib\site-packages\conda\common\configuration.py", line 369, in <genexpr>
raw_data = odict(kv for kv in chain.from_iterable(load_paths))
File "C:\Users\Subham\Anaconda3\lib\site-packages\conda\common\configuration.py", line 344, in _file_yaml_loader
yield fullpath, YamlRawParameter.make_raw_parameters_from_file(fullpath)
File "C:\Users\Subham\Anaconda3\lib\site-packages\conda\common\configuration.py", line 332, in make_raw_parameters_from_file
ruamel_yaml = yaml_load(fh)
File "C:\Users\Subham\Anaconda3\lib\site-packages\conda\common\serialize.py", line 54, in yaml_load
return yaml.load(string, Loader=yaml.RoundTripLoader, version="1.2")
File "C:\Users\Subham\Anaconda3\lib\site-packages\ruamel_yaml\main.py", line 73, in load
loader = Loader(stream, version, preserve_quotes=preserve_quotes)
File "C:\Users\Subham\Anaconda3\lib\site-packages\ruamel_yaml\loader.py", line 56, in __init__
Reader.__init__(self, stream)
File "C:\Users\Subham\Anaconda3\lib\site-packages\ruamel_yaml\reader.py", line 98, in __init__
self.determine_encoding()
File "C:\Users\Subham\Anaconda3\lib\site-packages\ruamel_yaml\reader.py", line 149, in determine_encoding
self.update(1)
File "C:\Users\Subham\Anaconda3\lib\site-packages\ruamel_yaml\reader.py", line 189, in update
self.check_printable(data)
File "C:\Users\Subham\Anaconda3\lib\site-packages\ruamel_yaml\reader.py", line 160, in check_printable
'unicode', "special characters are not allowed")
ruamel_yaml.reader.ReaderError: unacceptable character #x0000: special characters are not allowed
in "C:\Users\Subham\.condarc", position 0
|
ruamel_yaml.reader.ReaderError
|
def _get_starting_path_list(self):
path = self.environ.get("PATH", "")
if on_win:
# On Windows, the Anaconda Python interpreter prepends sys.prefix\Library\bin on
# startup. It's a hack that allows users to avoid using the correct activation
# procedure; a hack that needs to go away because it doesn't add all the paths.
# See: https://github.com/AnacondaRecipes/python-feedstock/blob/master/recipe/0005-Win32-Ensure-Library-bin-is-in-os.environ-PATH.patch # NOQA
# But, we now detect if that has happened because:
# 1. In future we would like to remove this hack and require real activation.
# 2. We should not assume that the Anaconda Python interpreter is being used.
path_split = path.split(os.pathsep)
library_bin = r"%s\Library\bin" % (sys.prefix)
# ^^^ deliberately the same as: https://github.com/AnacondaRecipes/python-feedstock/blob/8e8aee4e2f4141ecfab082776a00b374c62bb6d6/recipe/0005-Win32-Ensure-Library-bin-is-in-os.environ-PATH.patch#L20 # NOQA
if paths_equal(path_split[0], library_bin):
return path_split[1:]
else:
return path_split
else:
return path.split(os.pathsep)
|
def _get_starting_path_list(self):
path = self.environ["PATH"]
if on_win:
# On Windows, the Anaconda Python interpreter prepends sys.prefix\Library\bin on
# startup. It's a hack that allows users to avoid using the correct activation
# procedure; a hack that needs to go away because it doesn't add all the paths.
# See: https://github.com/AnacondaRecipes/python-feedstock/blob/master/recipe/0005-Win32-Ensure-Library-bin-is-in-os.environ-PATH.patch # NOQA
# But, we now detect if that has happened because:
# 1. In future we would like to remove this hack and require real activation.
# 2. We should not assume that the Anaconda Python interpreter is being used.
path_split = path.split(os.pathsep)
library_bin = r"%s\Library\bin" % (sys.prefix)
# ^^^ deliberately the same as: https://github.com/AnacondaRecipes/python-feedstock/blob/8e8aee4e2f4141ecfab082776a00b374c62bb6d6/recipe/0005-Win32-Ensure-Library-bin-is-in-os.environ-PATH.patch#L20 # NOQA
if paths_equal(path_split[0], library_bin):
return path_split[1:]
else:
return path_split
else:
return path.split(os.pathsep)
|
https://github.com/conda/conda/issues/7486
|
$ env -i bash --norc --noprofile
bash-4.1$ /path/to/conda/anaconda3/bin/conda shell.posix activate
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/group_workspaces/cems2/fiduceo/Users/gholl/anaconda3/lib/python3.6/site-packages/conda/cli/main.py", line 98, in main
return activator_main()
File "/group_workspaces/cems2/fiduceo/Users/gholl/anaconda3/lib/python3.6/site-packages/conda/activate.py", line 584, in main
print(activator.execute(), end='')
File "/group_workspaces/cems2/fiduceo/Users/gholl/anaconda3/lib/python3.6/site-packages/conda/activate.py", line 157, in execute
return getattr(self, self.command)()
File "/group_workspaces/cems2/fiduceo/Users/gholl/anaconda3/lib/python3.6/site-packages/conda/activate.py", line 143, in activate
return self._finalize(self._yield_commands(self.build_activate(self.env_name_or_prefix)),
File "/group_workspaces/cems2/fiduceo/Users/gholl/anaconda3/lib/python3.6/site-packages/conda/activate.py", line 244, in build_activate
new_path = self.pathsep_join(self._add_prefix_to_path(prefix))
File "/group_workspaces/cems2/fiduceo/Users/gholl/anaconda3/lib/python3.6/site-packages/conda/activate.py", line 417, in _add_prefix_to_path
starting_path_dirs = self._get_starting_path_list()
File "/group_workspaces/cems2/fiduceo/Users/gholl/anaconda3/lib/python3.6/site-packages/conda/activate.py", line 384, in _get_starting_path_list
path = self.environ['PATH']
KeyError: 'PATH'
`$ /group_workspaces/cems2/fiduceo/Users/gholl/anaconda3/bin/conda shell.posix activate`
environment variables:
CIO_TEST=<not set>
CONDA_ROOT=/group_workspaces/cems2/fiduceo/Users/gholl/anaconda3
REQUESTS_CA_BUNDLE=<not set>
SSL_CERT_FILE=<not set>
active environment : None
user config file : /home/users/gholl/.condarc
populated config files : /home/users/gholl/.condarc
conda version : 4.5.4
conda-build version : 3.0.27
python version : 3.6.3.final.0
base environment : /group_workspaces/cems2/fiduceo/Users/gholl/anaconda3 (writable)
channel URLs : https://conda.anaconda.org/rttools/linux-64
https://conda.anaconda.org/rttools/noarch
https://conda.anaconda.org/conda-forge/linux-64
https://conda.anaconda.org/conda-forge/noarch
https://repo.anaconda.com/pkgs/main/linux-64
https://repo.anaconda.com/pkgs/main/noarch
https://repo.anaconda.com/pkgs/free/linux-64
https://repo.anaconda.com/pkgs/free/noarch
https://repo.anaconda.com/pkgs/r/linux-64
https://repo.anaconda.com/pkgs/r/noarch
https://repo.anaconda.com/pkgs/pro/linux-64
https://repo.anaconda.com/pkgs/pro/noarch
package cache : /group_workspaces/cems2/fiduceo/Users/gholl/anaconda3/pkgs
/home/users/gholl/.conda/pkgs
envs directories : /group_workspaces/cems2/fiduceo/Users/gholl/anaconda3/envs
/home/users/gholl/.conda/envs
platform : linux-64
user-agent : conda/4.5.4 requests/2.18.4 CPython/3.6.3 Linux/2.6.32-754.el6.x86_64 rhel/6.10 glibc/2.12
UID:GID : 35063:26030
netrc file : None
offline mode : False
An unexpected error has occurred. Conda has prepared the above report.
Upload successful.
|
KeyError
|
def should_bypass_proxies_patched(should_bypass_proxies_func, url, no_proxy):
# Monkey patch requests, per https://github.com/requests/requests/pull/4723
if url.startswith("file://"):
return True
try:
return should_bypass_proxies_func(url, no_proxy)
except TypeError:
# For versions of requests we shouldn't have to deal with.
# https://github.com/conda/conda/issues/7503
# https://github.com/conda/conda/issues/7506
return should_bypass_proxies_func(url)
|
def should_bypass_proxies_patched(should_bypass_proxies_func, url, no_proxy):
# Monkey patch requests, per https://github.com/requests/requests/pull/4723
if url.startswith("file://"):
return True
return should_bypass_proxies_func(url, no_proxy)
|
https://github.com/conda/conda/issues/7506
|
~ $ conda update --all
Solving environment: failed
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/Users/apple/anaconda/lib/python3.6/site-packages/conda/exceptions.py", line 819, in __call__
return func(*args, **kwargs)
File "/Users/apple/anaconda/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/Users/apple/anaconda/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/Users/apple/anaconda/lib/python3.6/site-packages/conda/cli/main_update.py", line 14, in execute
install(args, parser, 'update')
File "/Users/apple/anaconda/lib/python3.6/site-packages/conda/cli/install.py", line 235, in install
force_reinstall=context.force,
File "/Users/apple/anaconda/lib/python3.6/site-packages/conda/core/solve.py", line 506, in solve_for_transaction
force_remove, force_reinstall)
File "/Users/apple/anaconda/lib/python3.6/site-packages/conda/core/solve.py", line 439, in solve_for_diff
final_precs = self.solve_final_state(deps_modifier, prune, ignore_pinned, force_remove)
File "/Users/apple/anaconda/lib/python3.6/site-packages/conda/core/solve.py", line 180, in solve_final_state
index, r = self._prepare(prepared_specs)
File "/Users/apple/anaconda/lib/python3.6/site-packages/conda/core/solve.py", line 580, in _prepare
self.subdirs, prepared_specs)
File "/Users/apple/anaconda/lib/python3.6/site-packages/conda/core/index.py", line 215, in get_reduced_index
new_records = query_all(spec)
File "/Users/apple/anaconda/lib/python3.6/site-packages/conda/core/index.py", line 184, in query_all
return tuple(concat(future.result() for future in as_completed(futures)))
File "/Users/apple/anaconda/lib/python3.6/site-packages/conda/core/subdir_data.py", line 94, in query
self.load()
File "/Users/apple/anaconda/lib/python3.6/site-packages/conda/core/subdir_data.py", line 148, in load
_internal_state = self._load()
File "/Users/apple/anaconda/lib/python3.6/site-packages/conda/core/subdir_data.py", line 216, in _load
mod_etag_headers.get('_mod'))
File "/Users/apple/anaconda/lib/python3.6/site-packages/conda/core/subdir_data.py", line 416, in fetch_repodata_remote_request
timeout=timeout)
File "/Users/apple/.local/lib/python3.6/site-packages/requests/sessions.py", line 480, in get
return self.request('GET', url, **kwargs)
File "/Users/apple/.local/lib/python3.6/site-packages/requests/sessions.py", line 459, in request
prep.url, proxies, stream, verify, cert
File "/Users/apple/.local/lib/python3.6/site-packages/requests/sessions.py", line 617, in merge_environment_settings
env_proxies = get_environ_proxies(url) or {}
File "/Users/apple/.local/lib/python3.6/site-packages/requests/utils.py", line 562, in get_environ_proxies
if should_bypass_proxies(url):
TypeError: should_bypass_proxies_patched() missing 1 required positional argument: 'no_proxy'
`$ /Users/apple/anaconda/bin/conda update --all`
environment variables:
CIO_TEST=<not set>
CONDA_ROOT=/Users/apple/anaconda
PATH=~/Library/Python/2.7/bin:/Users/apple/anaconda/bin:/usr/bin:/bin:/usr/
sbin:/sbin:/usr/local/bin:/Library/TeX/texbin:/opt/X11/bin:/Library/Fr
ameworks/Mono.framework/Versions/Current/Commands:/Applications/Wiresh
ark.app/Contents/MacOS
REQUESTS_CA_BUNDLE=<not set>
SSL_CERT_FILE=<not set>
|
TypeError
|
def get_user_requests(self):
"""
return a list of user requested items. Each item is a dict with the
following keys:
'date': the date and time running the command
'cmd': a list of argv of the actual command which was run
'action': install/remove/update
'specs': the specs being used
"""
res = []
for dt, unused_cont, comments in self.parse():
item = {"date": dt}
for line in comments:
comment_items = self._parse_comment_line(line)
item.update(comment_items)
if "cmd" in item:
res.append(item)
dists = groupby(itemgetter(0), unused_cont)
item["unlink_dists"] = dists.get("-", ())
item["link_dists"] = dists.get("+", ())
return res
|
def get_user_requests(self):
"""
return a list of user requested items. Each item is a dict with the
following keys:
'date': the date and time running the command
'cmd': a list of argv of the actual command which was run
'action': install/remove/update
'specs': the specs being used
"""
res = []
com_pat = re.compile(r"#\s*cmd:\s*(.+)")
spec_pat = re.compile(r"#\s*(\w+)\s*specs:\s*(.+)?")
for dt, unused_cont, comments in self.parse():
item = {"date": dt}
for line in comments:
m = com_pat.match(line)
if m:
argv = m.group(1).split()
if argv[0].endswith("conda"):
argv[0] = "conda"
item["cmd"] = argv
m = spec_pat.match(line)
if m:
action, specs = m.groups()
item["action"] = action
specs = specs or ""
if specs.startswith("["):
specs = literal_eval(specs)
elif "[" not in specs:
specs = specs.split(",")
specs = [spec for spec in specs if spec and not spec.endswith("@")]
if specs and action in ("update", "install", "create"):
item["update_specs"] = item["specs"] = specs
elif specs and action in ("remove", "uninstall"):
item["remove_specs"] = item["specs"] = specs
if "cmd" in item:
res.append(item)
dists = groupby(itemgetter(0), unused_cont)
item["unlink_dists"] = dists.get("-", ())
item["link_dists"] = dists.get("+", ())
return res
|
https://github.com/conda/conda/issues/6691
|
$ conda --version
conda 4.4.7
$ conda install -vvv numpy
DEBUG conda.gateways.logging:set_verbosity(148): verbosity set to 3
Solving environment: ...working... DEBUG conda.core.solve:solve_final_state(140): solving prefix /scratch/mc3
specs_to_remove: frozenset()
specs_to_add: frozenset({MatchSpec(name=LowerStrMatch('numpy'))})
prune: False
TRACE conda.core.linked_data:_load_single_record(113): loading prefix record /scratch/mc3/conda-meta/appnope-0.1.0-py36hf537a9a_0.json
TRACE conda.core.linked_data:_load_single_record(113): loading prefix record /scratch/mc3/conda-meta/asn1crypto-0.23.0-py36h782d450_0.json
TRACE conda.core.linked_data:_load_single_record(113): loading prefix record /scratch/mc3/conda-meta/bleach-2.1.1-py36h27c13d8_0.json
[...]
TRACE conda.core.linked_data:_load_single_record(113): loading prefix record /scratch/mc3/conda-meta/zeromq-4.2.2-ha360ad0_2.json
TRACE conda.core.linked_data:_load_single_record(113): loading prefix record /scratch/mc3/conda-meta/zlib-1.2.11-hf3cbc9b_2.json
failed
Traceback (most recent call last):
File "/scratch/mc3/lib/python3.6/site-packages/conda/exceptions.py", line 743, in __call__
return func(*args, **kwargs)
File "/scratch/mc3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/scratch/mc3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 76, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/scratch/mc3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/scratch/mc3/lib/python3.6/site-packages/conda/cli/install.py", line 236, in install
force_reinstall=context.force,
File "/scratch/mc3/lib/python3.6/site-packages/conda/core/solve.py", line 504, in solve_for_transaction
force_remove, force_reinstall)
File "/scratch/mc3/lib/python3.6/site-packages/conda/core/solve.py", line 437, in solve_for_diff
final_precs = self.solve_final_state(deps_modifier, prune, ignore_pinned, force_remove)
File "/scratch/mc3/lib/python3.6/site-packages/conda/core/solve.py", line 146, in solve_final_state
specs_from_history_map = History(self.prefix).get_requested_specs_map()
File "/scratch/mc3/lib/python3.6/site-packages/conda/history.py", line 187, in get_requested_specs_map
spec_map.update(((s.name, s) for s in update_specs))
File "/scratch/mc3/lib/python3.6/site-packages/conda/history.py", line 187, in <genexpr>
spec_map.update(((s.name, s) for s in update_specs))
File "/scratch/mc3/lib/python3.6/site-packages/conda/history.py", line 186, in <genexpr>
update_specs = (MatchSpec(spec) for spec in request.get('update_specs', ()))
File "/scratch/mc3/lib/python3.6/site-packages/conda/models/match_spec.py", line 39, in __call__
parsed = _parse_spec_str(spec_arg)
File "/scratch/mc3/lib/python3.6/site-packages/conda/models/match_spec.py", line 556, in _parse_spec_str
raise CondaValueError("Invalid MatchSpec: %s" % spec_str)
conda.exceptions.CondaValueError: Invalid MatchSpec: <2.0
|
conda.exceptions.CondaValueError
|
def get_reduced_index(prefix, channels, subdirs, specs):
# # this block of code is a "combine" step intended to filter out redundant specs
# # causes a problem with py.test tests/core/test_solve.py -k broken_install
# specs_map = defaultdict(list)
# for spec in specs:
# specs_map[spec.name].append(spec)
# consolidated_specs = set()
# for spec_name, specs_group in iteritems(specs_map):
# if len(specs_group) == 1:
# consolidated_specs.add(specs_group[0])
# elif spec_name == '*':
# consolidated_specs.update(specs_group)
# else:
# keep_specs = []
# for spec in specs_group:
# if len(spec._match_components) > 1 or spec.target or spec.optional:
# keep_specs.append(spec)
# consolidated_specs.update(keep_specs)
with ThreadLimitedThreadPoolExecutor() as executor:
channel_urls = all_channel_urls(channels, subdirs=subdirs)
check_whitelist(channel_urls)
if context.offline:
grouped_urls = groupby(lambda url: url.startswith("file://"), channel_urls)
ignored_urls = grouped_urls.get(False, ())
if ignored_urls:
log.info(
"Ignoring the following channel urls because mode is offline.%s",
dashlist(ignored_urls),
)
channel_urls = IndexedSet(grouped_urls.get(True, ()))
subdir_datas = tuple(SubdirData(Channel(url)) for url in channel_urls)
records = IndexedSet()
collected_names = set()
collected_track_features = set()
pending_names = set()
pending_track_features = set()
def query_all(spec):
futures = tuple(executor.submit(sd.query, spec) for sd in subdir_datas)
return tuple(concat(future.result() for future in as_completed(futures)))
def push_spec(spec):
name = spec.get_raw_value("name")
if name and name not in collected_names:
pending_names.add(name)
track_features = spec.get_raw_value("track_features")
if track_features:
for ftr_name in track_features:
if ftr_name not in collected_track_features:
pending_track_features.add(ftr_name)
def push_record(record):
push_spec(MatchSpec(record.name))
for _spec in record.combined_depends:
push_spec(_spec)
if record.track_features:
for ftr_name in record.track_features:
push_spec(MatchSpec(track_features=ftr_name))
if prefix:
for prefix_rec in PrefixData(prefix).iter_records():
push_record(prefix_rec)
for spec in specs:
push_spec(spec)
while pending_names or pending_track_features:
while pending_names:
name = pending_names.pop()
collected_names.add(name)
spec = MatchSpec(name)
new_records = query_all(spec)
for record in new_records:
push_record(record)
records.update(new_records)
while pending_track_features:
feature_name = pending_track_features.pop()
collected_track_features.add(feature_name)
spec = MatchSpec(track_features=feature_name)
new_records = query_all(spec)
for record in new_records:
push_record(record)
records.update(new_records)
reduced_index = {Dist(rec): rec for rec in records}
if prefix is not None:
_supplement_index_with_prefix(reduced_index, prefix)
if context.offline or (
"unknown" in context._argparse_args and context._argparse_args.unknown
):
# This is really messed up right now. Dates all the way back to
# https://github.com/conda/conda/commit/f761f65a82b739562a0d997a2570e2b8a0bdc783
# TODO: revisit this later
_supplement_index_with_cache(reduced_index)
# add feature records for the solver
known_features = set()
for rec in itervalues(reduced_index):
known_features.update(concatv(rec.track_features, rec.features))
known_features.update(context.track_features)
for ftr_str in known_features:
rec = make_feature_record(ftr_str)
reduced_index[Dist(rec)] = rec
return reduced_index
|
def get_reduced_index(prefix, channels, subdirs, specs):
# # this block of code is a "combine" step intended to filter out redundant specs
# # causes a problem with py.test tests/core/test_solve.py -k broken_install
# specs_map = defaultdict(list)
# for spec in specs:
# specs_map[spec.name].append(spec)
# consolidated_specs = set()
# for spec_name, specs_group in iteritems(specs_map):
# if len(specs_group) == 1:
# consolidated_specs.add(specs_group[0])
# elif spec_name == '*':
# consolidated_specs.update(specs_group)
# else:
# keep_specs = []
# for spec in specs_group:
# if len(spec._match_components) > 1 or spec.target or spec.optional:
# keep_specs.append(spec)
# consolidated_specs.update(keep_specs)
with ThreadLimitedThreadPoolExecutor() as executor:
channel_urls = all_channel_urls(channels, subdirs=subdirs)
check_whitelist(channel_urls)
if context.offline:
grouped_urls = groupby(lambda url: url.startswith("file://"), channel_urls)
ignored_urls = grouped_urls.get(False, ())
if ignored_urls:
log.info(
"Ignoring the following channel urls because mode is offline.%s",
dashlist(ignored_urls),
)
channel_urls = IndexedSet(grouped_urls.get(True, ()))
subdir_datas = tuple(SubdirData(Channel(url)) for url in channel_urls)
records = IndexedSet()
collected_names = set()
collected_track_features = set()
pending_names = set()
pending_track_features = set()
def query_all(spec):
futures = tuple(executor.submit(sd.query, spec) for sd in subdir_datas)
return tuple(concat(future.result() for future in as_completed(futures)))
def push_spec(spec):
name = spec.get_raw_value("name")
if name and name not in collected_names:
pending_names.add(name)
track_features = spec.get_raw_value("track_features")
if track_features:
for ftr_name in track_features:
if ftr_name not in collected_track_features:
pending_track_features.add(ftr_name)
def push_record(record):
for _spec in record.combined_depends:
push_spec(_spec)
if record.track_features:
for ftr_name in record.track_features:
push_spec(MatchSpec(track_features=ftr_name))
for spec in specs:
push_spec(spec)
while pending_names or pending_track_features:
while pending_names:
name = pending_names.pop()
collected_names.add(name)
spec = MatchSpec(name)
new_records = query_all(spec)
for record in new_records:
push_record(record)
records.update(new_records)
while pending_track_features:
feature_name = pending_track_features.pop()
collected_track_features.add(feature_name)
spec = MatchSpec(track_features=feature_name)
new_records = query_all(spec)
for record in new_records:
push_record(record)
records.update(new_records)
reduced_index = {Dist(rec): rec for rec in records}
if prefix is not None:
_supplement_index_with_prefix(reduced_index, prefix)
if context.offline or (
"unknown" in context._argparse_args and context._argparse_args.unknown
):
# This is really messed up right now. Dates all the way back to
# https://github.com/conda/conda/commit/f761f65a82b739562a0d997a2570e2b8a0bdc783
# TODO: revisit this later
_supplement_index_with_cache(reduced_index)
# add feature records for the solver
known_features = set()
for rec in itervalues(reduced_index):
known_features.update(concatv(rec.track_features, rec.features))
known_features.update(context.track_features)
for ftr_str in known_features:
rec = make_feature_record(ftr_str)
reduced_index[Dist(rec)] = rec
return reduced_index
|
https://github.com/conda/conda/issues/6691
|
$ conda --version
conda 4.4.7
$ conda install -vvv numpy
DEBUG conda.gateways.logging:set_verbosity(148): verbosity set to 3
Solving environment: ...working... DEBUG conda.core.solve:solve_final_state(140): solving prefix /scratch/mc3
specs_to_remove: frozenset()
specs_to_add: frozenset({MatchSpec(name=LowerStrMatch('numpy'))})
prune: False
TRACE conda.core.linked_data:_load_single_record(113): loading prefix record /scratch/mc3/conda-meta/appnope-0.1.0-py36hf537a9a_0.json
TRACE conda.core.linked_data:_load_single_record(113): loading prefix record /scratch/mc3/conda-meta/asn1crypto-0.23.0-py36h782d450_0.json
TRACE conda.core.linked_data:_load_single_record(113): loading prefix record /scratch/mc3/conda-meta/bleach-2.1.1-py36h27c13d8_0.json
[...]
TRACE conda.core.linked_data:_load_single_record(113): loading prefix record /scratch/mc3/conda-meta/zeromq-4.2.2-ha360ad0_2.json
TRACE conda.core.linked_data:_load_single_record(113): loading prefix record /scratch/mc3/conda-meta/zlib-1.2.11-hf3cbc9b_2.json
failed
Traceback (most recent call last):
File "/scratch/mc3/lib/python3.6/site-packages/conda/exceptions.py", line 743, in __call__
return func(*args, **kwargs)
File "/scratch/mc3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/scratch/mc3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 76, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/scratch/mc3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/scratch/mc3/lib/python3.6/site-packages/conda/cli/install.py", line 236, in install
force_reinstall=context.force,
File "/scratch/mc3/lib/python3.6/site-packages/conda/core/solve.py", line 504, in solve_for_transaction
force_remove, force_reinstall)
File "/scratch/mc3/lib/python3.6/site-packages/conda/core/solve.py", line 437, in solve_for_diff
final_precs = self.solve_final_state(deps_modifier, prune, ignore_pinned, force_remove)
File "/scratch/mc3/lib/python3.6/site-packages/conda/core/solve.py", line 146, in solve_final_state
specs_from_history_map = History(self.prefix).get_requested_specs_map()
File "/scratch/mc3/lib/python3.6/site-packages/conda/history.py", line 187, in get_requested_specs_map
spec_map.update(((s.name, s) for s in update_specs))
File "/scratch/mc3/lib/python3.6/site-packages/conda/history.py", line 187, in <genexpr>
spec_map.update(((s.name, s) for s in update_specs))
File "/scratch/mc3/lib/python3.6/site-packages/conda/history.py", line 186, in <genexpr>
update_specs = (MatchSpec(spec) for spec in request.get('update_specs', ()))
File "/scratch/mc3/lib/python3.6/site-packages/conda/models/match_spec.py", line 39, in __call__
parsed = _parse_spec_str(spec_arg)
File "/scratch/mc3/lib/python3.6/site-packages/conda/models/match_spec.py", line 556, in _parse_spec_str
raise CondaValueError("Invalid MatchSpec: %s" % spec_str)
conda.exceptions.CondaValueError: Invalid MatchSpec: <2.0
|
conda.exceptions.CondaValueError
|
def push_record(record):
push_spec(MatchSpec(record.name))
for _spec in record.combined_depends:
push_spec(_spec)
if record.track_features:
for ftr_name in record.track_features:
push_spec(MatchSpec(track_features=ftr_name))
|
def push_record(record):
for _spec in record.combined_depends:
push_spec(_spec)
if record.track_features:
for ftr_name in record.track_features:
push_spec(MatchSpec(track_features=ftr_name))
|
https://github.com/conda/conda/issues/6691
|
$ conda --version
conda 4.4.7
$ conda install -vvv numpy
DEBUG conda.gateways.logging:set_verbosity(148): verbosity set to 3
Solving environment: ...working... DEBUG conda.core.solve:solve_final_state(140): solving prefix /scratch/mc3
specs_to_remove: frozenset()
specs_to_add: frozenset({MatchSpec(name=LowerStrMatch('numpy'))})
prune: False
TRACE conda.core.linked_data:_load_single_record(113): loading prefix record /scratch/mc3/conda-meta/appnope-0.1.0-py36hf537a9a_0.json
TRACE conda.core.linked_data:_load_single_record(113): loading prefix record /scratch/mc3/conda-meta/asn1crypto-0.23.0-py36h782d450_0.json
TRACE conda.core.linked_data:_load_single_record(113): loading prefix record /scratch/mc3/conda-meta/bleach-2.1.1-py36h27c13d8_0.json
[...]
TRACE conda.core.linked_data:_load_single_record(113): loading prefix record /scratch/mc3/conda-meta/zeromq-4.2.2-ha360ad0_2.json
TRACE conda.core.linked_data:_load_single_record(113): loading prefix record /scratch/mc3/conda-meta/zlib-1.2.11-hf3cbc9b_2.json
failed
Traceback (most recent call last):
File "/scratch/mc3/lib/python3.6/site-packages/conda/exceptions.py", line 743, in __call__
return func(*args, **kwargs)
File "/scratch/mc3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/scratch/mc3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 76, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/scratch/mc3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/scratch/mc3/lib/python3.6/site-packages/conda/cli/install.py", line 236, in install
force_reinstall=context.force,
File "/scratch/mc3/lib/python3.6/site-packages/conda/core/solve.py", line 504, in solve_for_transaction
force_remove, force_reinstall)
File "/scratch/mc3/lib/python3.6/site-packages/conda/core/solve.py", line 437, in solve_for_diff
final_precs = self.solve_final_state(deps_modifier, prune, ignore_pinned, force_remove)
File "/scratch/mc3/lib/python3.6/site-packages/conda/core/solve.py", line 146, in solve_final_state
specs_from_history_map = History(self.prefix).get_requested_specs_map()
File "/scratch/mc3/lib/python3.6/site-packages/conda/history.py", line 187, in get_requested_specs_map
spec_map.update(((s.name, s) for s in update_specs))
File "/scratch/mc3/lib/python3.6/site-packages/conda/history.py", line 187, in <genexpr>
spec_map.update(((s.name, s) for s in update_specs))
File "/scratch/mc3/lib/python3.6/site-packages/conda/history.py", line 186, in <genexpr>
update_specs = (MatchSpec(spec) for spec in request.get('update_specs', ()))
File "/scratch/mc3/lib/python3.6/site-packages/conda/models/match_spec.py", line 39, in __call__
parsed = _parse_spec_str(spec_arg)
File "/scratch/mc3/lib/python3.6/site-packages/conda/models/match_spec.py", line 556, in _parse_spec_str
raise CondaValueError("Invalid MatchSpec: %s" % spec_str)
conda.exceptions.CondaValueError: Invalid MatchSpec: <2.0
|
conda.exceptions.CondaValueError
|
def cast(val, typ):
log = logging.getLogger(__name__)
log.debug((val, typ))
if " or " in typ:
for t in typ.split(" or "):
try:
return cast(val, t)
except TqdmTypeError:
pass
raise TqdmTypeError(val + " : " + typ)
# sys.stderr.write('\ndebug | `val:type`: `' + val + ':' + typ + '`.\n')
if typ == "bool":
if (val == "True") or (val == ""):
return True
elif val == "False":
return False
else:
raise TqdmTypeError(val + " : " + typ)
try:
return eval(typ + '("' + val + '")')
except:
if typ == "chr":
return chr(ord(eval('"' + val + '"')))
else:
raise TqdmTypeError(val + " : " + typ)
|
def cast(val, typ):
# sys.stderr.write('\ndebug | `val:type`: `' + val + ':' + typ + '`.\n')
if typ == "bool":
if (val == "True") or (val == ""):
return True
elif val == "False":
return False
else:
raise TqdmTypeError(val + " : " + typ)
try:
return eval(typ + '("' + val + '")')
except:
if typ == "chr":
return chr(ord(eval('"' + val + '"')))
else:
raise TqdmTypeError(val + " : " + typ)
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def posix_pipe(
fin,
fout,
delim="\n",
buf_size=256,
callback=lambda int: None, # pragma: no cover
):
"""
Params
------
fin : file with `read(buf_size : int)` method
fout : file with `write` (and optionally `flush`) methods.
callback : function(int), e.g.: `tqdm.update`
"""
fp_write = fout.write
# tmp = ''
if not delim:
while True:
tmp = fin.read(buf_size)
# flush at EOF
if not tmp:
getattr(fout, "flush", lambda: None)() # pragma: no cover
return
fp_write(tmp)
callback(len(tmp))
# return
buf = ""
# n = 0
while True:
tmp = fin.read(buf_size)
# flush at EOF
if not tmp:
if buf:
fp_write(buf)
callback(1 + buf.count(delim)) # n += 1 + buf.count(delim)
getattr(fout, "flush", lambda: None)() # pragma: no cover
return # n
while True:
try:
i = tmp.index(delim)
except ValueError:
buf += tmp
break
else:
fp_write(buf + tmp[: i + len(delim)])
callback(1) # n += 1
buf = ""
tmp = tmp[i + len(delim) :]
|
def posix_pipe(
fin,
fout,
delim="\n",
buf_size=256,
callback=lambda int: None, # pragma: no cover
):
"""
Params
------
fin : file with `read(buf_size : int)` method
fout : file with `write` (and optionally `flush`) methods.
callback : function(int), e.g.: `tqdm.update`
"""
fp_write = fout.write
tmp = ""
if not delim:
while True:
tmp = fin.read(buf_size)
# flush at EOF
if not tmp:
getattr(fout, "flush", lambda: None)() # pragma: no cover
return
fp_write(tmp)
callback(len(tmp))
return
buf = ""
# n = 0
while True:
tmp = fin.read(buf_size)
# flush at EOF
if not tmp:
if buf:
fp_write(buf)
callback(1 + buf.count(delim)) # n += 1 + buf.count(delim)
getattr(fout, "flush", lambda: None)() # pragma: no cover
return # n
while True:
try:
i = tmp.index(delim)
except ValueError:
buf += tmp
break
else:
fp_write(buf + tmp[: i + len(delim)])
callback(1) # n += 1
buf = ""
tmp = tmp[i + len(delim) :]
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def main(fp=sys.stderr):
"""
Paramters (internal use only)
---------
fp : file-like object for tqdm
"""
try:
log = sys.argv.index("--log")
except ValueError:
logLevel = "INFO"
else:
# sys.argv.pop(log)
# logLevel = sys.argv.pop(log)
logLevel = sys.argv[log + 1]
logging.basicConfig(
level=getattr(logging, logLevel),
format="%(levelname)s:%(module)s:%(lineno)d:%(message)s",
)
log = logging.getLogger(__name__)
d = tqdm.__init__.__doc__ + CLI_EXTRA_DOC
opt_types = dict(RE_OPTS.findall(d))
# opt_types['delim'] = 'chr'
for o in UNSUPPORTED_OPTS:
opt_types.pop(o)
log.debug(sorted(opt_types.items()))
# d = RE_OPTS.sub(r' --\1=<\1> : \2', d)
split = RE_OPTS.split(d)
opt_types_desc = zip(split[1::3], split[2::3], split[3::3])
d = "".join(
"\n --{0}=<{0}> : {1}{2}".format(*otd)
for otd in opt_types_desc
if otd[0] not in UNSUPPORTED_OPTS
)
d = (
"""Usage:
tqdm [--help | options]
Options:
-h, --help Print this help and exit
-v, --version Print version and exit
"""
+ d.strip("\n")
+ "\n"
)
# opts = docopt(d, version=__version__)
if any(v in sys.argv for v in ("-v", "--version")):
sys.stdout.write(__version__ + "\n")
sys.exit(0)
elif any(v in sys.argv for v in ("-h", "--help")):
sys.stdout.write(d + "\n")
sys.exit(0)
argv = RE_SHLEX.split(" ".join(["tqdm"] + sys.argv[1:]))
opts = dict(zip(argv[1::2], argv[2::2]))
log.debug(opts)
opts.pop("log", True)
tqdm_args = {"file": fp}
try:
for o, v in opts.items():
try:
tqdm_args[o] = cast(v, opt_types[o])
except KeyError as e:
raise TqdmKeyError(str(e))
log.debug("args:" + str(tqdm_args))
except:
fp.write("\nError:\nUsage:\n tqdm [--help | options]\n")
for i in sys.stdin:
sys.stdout.write(i)
raise
else:
buf_size = tqdm_args.pop("buf_size", 256)
delim = tqdm_args.pop("delim", "\n")
delim_per_char = tqdm_args.pop("bytes", False)
if delim_per_char:
tqdm_args.setdefault("unit", "B")
tqdm_args.setdefault("unit_scale", True)
tqdm_args.setdefault("unit_divisor", 1024)
log.debug(tqdm_args)
with tqdm(**tqdm_args) as t:
posix_pipe(sys.stdin, sys.stdout, "", buf_size, t.update)
elif delim == "\n":
log.debug(tqdm_args)
for i in tqdm(sys.stdin, **tqdm_args):
sys.stdout.write(i)
else:
log.debug(tqdm_args)
with tqdm(**tqdm_args) as t:
posix_pipe(sys.stdin, sys.stdout, delim, buf_size, t.update)
|
def main(fp=sys.stderr):
"""
Paramters (internal use only)
---------
fp : file-like object for tqdm
"""
d = tqdm.__init__.__doc__ + CLI_EXTRA_DOC
opt_types = dict(RE_OPTS.findall(d))
for o in UNSUPPORTED_OPTS:
opt_types.pop(o)
# d = RE_OPTS.sub(r' --\1=<\1> : \2', d)
split = RE_OPTS.split(d)
opt_types_desc = zip(split[1::3], split[2::3], split[3::3])
d = "".join(
"\n --{0}=<{0}> : {1}{2}".format(*otd)
for otd in opt_types_desc
if otd[0] not in UNSUPPORTED_OPTS
)
d = (
"""Usage:
tqdm [--help | options]
Options:
-h, --help Print this help and exit
-v, --version Print version and exit
"""
+ d.strip("\n")
+ "\n"
)
# opts = docopt(d, version=__version__)
if any(v in sys.argv for v in ("-v", "--version")):
sys.stdout.write(__version__ + "\n")
sys.exit(0)
elif any(v in sys.argv for v in ("-h", "--help")):
sys.stdout.write(d + "\n")
sys.exit(0)
argv = RE_SHLEX.split(" ".join(sys.argv))
opts = dict(zip(argv[1::2], argv[2::2]))
tqdm_args = {"file": fp}
try:
for o, v in opts.items():
try:
tqdm_args[o] = cast(v, opt_types[o])
except KeyError as e:
raise TqdmKeyError(str(e))
# fp.write('\ndebug | args: ' + str(tqdm_args) + '\n')
except:
fp.write("\nError:\nUsage:\n tqdm [--help | options]\n")
for i in sys.stdin:
sys.stdout.write(i)
raise
else:
buf_size = tqdm_args.pop("buf_size", 256)
delim = tqdm_args.pop("delim", "\n")
delim_per_char = tqdm_args.pop("bytes", False)
if delim_per_char:
with tqdm(**tqdm_args) as t:
posix_pipe(sys.stdin, sys.stdout, "", buf_size, t.update)
elif delim == "\n":
for i in tqdm(sys.stdin, **tqdm_args):
sys.stdout.write(i)
else:
with tqdm(**tqdm_args) as t:
posix_pipe(sys.stdin, sys.stdout, delim, buf_size, t.update)
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def format_sizeof(num, suffix="", divisor=1000):
"""
Formats a number (greater than unity) with SI Order of Magnitude
prefixes.
Parameters
----------
num : float
Number ( >= 1) to format.
suffix : str, optional
Post-postfix [default: ''].
divisor : float, optionl
Divisor between prefixes [default: 1000].
Returns
-------
out : str
Number with Order of Magnitude SI unit postfix.
"""
for unit in ["", "k", "M", "G", "T", "P", "E", "Z"]:
if abs(num) < 999.95:
if abs(num) < 99.95:
if abs(num) < 9.995:
return "{0:1.2f}".format(num) + unit + suffix
return "{0:2.1f}".format(num) + unit + suffix
return "{0:3.0f}".format(num) + unit + suffix
num /= divisor
return "{0:3.1f}Y".format(num) + suffix
|
def format_sizeof(num, suffix="", divisor=1000):
"""
Formats a number (greater than unity) with SI Order of Magnitude
prefixes.
Parameters
----------
num : float
Number ( >= 1) to format.
suffix : str, optional
Post-postfix [default: ''].
divisor : float, optionl
Divisor between prefixes [default: 1000].
Returns
-------
out : str
Number with Order of Magnitude SI unit postfix.
"""
for unit in ["", "K", "M", "G", "T", "P", "E", "Z"]:
if abs(num) < 999.95:
if abs(num) < 99.95:
if abs(num) < 9.995:
return "{0:1.2f}".format(num) + unit + suffix
return "{0:2.1f}".format(num) + unit + suffix
return "{0:3.0f}".format(num) + unit + suffix
num /= divisor
return "{0:3.1f}Y".format(num) + suffix
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def format_meter(
n,
total,
elapsed,
ncols=None,
prefix="",
ascii=False,
unit="it",
unit_scale=False,
rate=None,
bar_format=None,
postfix=None,
unit_divisor=1000,
):
"""
Return a string-based progress bar given some parameters
Parameters
----------
n : int
Number of finished iterations.
total : int
The expected total number of iterations. If meaningless (), only
basic progress statistics are displayed (no ETA).
elapsed : float
Number of seconds passed since start.
ncols : int, optional
The width of the entire output message. If specified,
dynamically resizes the progress meter to stay within this bound
[default: None]. The fallback meter width is 10 for the progress
bar + no limit for the iterations counter and statistics. If 0,
will not print any meter (only stats).
prefix : str, optional
Prefix message (included in total width) [default: ''].
Use as {desc} in bar_format string.
ascii : bool, optional
If not set, use unicode (smooth blocks) to fill the meter
[default: False]. The fallback is to use ASCII characters
(1-9 #).
unit : str, optional
The iteration unit [default: 'it'].
unit_scale : bool or int or float, optional
If 1 or True, the number of iterations will be printed with an
appropriate SI metric prefix (k = 10^3, M = 10^6, etc.)
[default: False]. If any other non-zero number, will scale
`total` and `n`.
rate : float, optional
Manual override for iteration rate.
If [default: None], uses n/elapsed.
bar_format : str, optional
Specify a custom bar string formatting. May impact performance.
[default: '{l_bar}{bar}{r_bar}'], where
l_bar='{desc}: {percentage:3.0f}%|' and
r_bar='| {n_fmt}/{total_fmt} [{elapsed}<{remaining}, '
'{rate_fmt}{postfix}]'
Possible vars: l_bar, bar, r_bar, n, n_fmt, total, total_fmt,
percentage, rate, rate_fmt, rate_noinv, rate_noinv_fmt,
rate_inv, rate_inv_fmt, elapsed, remaining, desc, postfix.
Note that a trailing ": " is automatically removed after {desc}
if the latter is empty.
postfix : *, optional
Similar to `prefix`, but placed at the end
(e.g. for additional stats).
Note: postfix is usually a string (not a dict) for this method,
and will if possible be set to postfix = ', ' + postfix.
However other types are supported (#382).
unit_divisor : float, optional
[default: 1000], ignored unless `unit_scale` is True.
Returns
-------
out : Formatted meter and stats, ready to display.
"""
# sanity check: total
if total and n > total:
total = None
# apply custom scale if necessary
if unit_scale and unit_scale not in (True, 1):
total *= unit_scale
n *= unit_scale
unit_scale = False
format_interval = tqdm.format_interval
elapsed_str = format_interval(elapsed)
# if unspecified, attempt to use rate = average speed
# (we allow manual override since predicting time is an arcane art)
if rate is None and elapsed:
rate = n / elapsed
inv_rate = 1 / rate if rate else None
format_sizeof = tqdm.format_sizeof
rate_noinv_fmt = (
(
(format_sizeof(rate) if unit_scale else "{0:5.2f}".format(rate))
if rate
else "?"
)
+ unit
+ "/s"
)
rate_inv_fmt = (
(
(format_sizeof(inv_rate) if unit_scale else "{0:5.2f}".format(inv_rate))
if inv_rate
else "?"
)
+ "s/"
+ unit
)
rate_fmt = rate_inv_fmt if inv_rate and inv_rate > 1 else rate_noinv_fmt
if unit_scale:
n_fmt = format_sizeof(n, divisor=unit_divisor)
total_fmt = format_sizeof(total, divisor=unit_divisor) if total else None
else:
n_fmt = str(n)
total_fmt = str(total)
try:
postfix = ", " + postfix if postfix else ""
except TypeError:
pass
# total is known: we can predict some stats
if total:
# fractional and percentage progress
frac = n / total
percentage = frac * 100
remaining_str = format_interval((total - n) / rate) if rate else "?"
# format the stats displayed to the left and right sides of the bar
if prefix:
# old prefix setup work around
bool_prefix_colon_already = prefix[-2:] == ": "
l_bar = prefix if bool_prefix_colon_already else prefix + ": "
else:
l_bar = ""
l_bar += "{0:3.0f}%|".format(percentage)
r_bar = "| {0}/{1} [{2}<{3}, {4}{5}]".format(
n_fmt, total_fmt, elapsed_str, remaining_str, rate_fmt, postfix
)
if ncols == 0:
return l_bar[:-1] + r_bar[1:]
if bar_format:
# Custom bar formatting
# Populate a dict with all available progress indicators
bar_args = {
"n": n,
"n_fmt": n_fmt,
"total": total,
"total_fmt": total_fmt,
"percentage": percentage,
"rate": inv_rate if inv_rate and inv_rate > 1 else rate,
"rate_fmt": rate_fmt,
"rate_noinv": rate,
"rate_noinv_fmt": rate_noinv_fmt,
"rate_inv": inv_rate,
"rate_inv_fmt": rate_inv_fmt,
"elapsed": elapsed_str,
"remaining": remaining_str,
"l_bar": l_bar,
"r_bar": r_bar,
"desc": prefix or "",
"postfix": postfix,
# 'bar': full_bar # replaced by procedure below
}
# auto-remove colon for empty `desc`
if not prefix:
bar_format = bar_format.replace("{desc}: ", "")
# Interpolate supplied bar format with the dict
if "{bar}" in bar_format:
# Format left/right sides of the bar, and format the bar
# later in the remaining space (avoid breaking display)
l_bar_user, r_bar_user = bar_format.split("{bar}")
l_bar = l_bar_user.format(**bar_args)
r_bar = r_bar_user.format(**bar_args)
else:
# Else no progress bar, we can just format and return
return bar_format.format(**bar_args)
# Formatting progress bar
# space available for bar's display
N_BARS = max(1, ncols - len(l_bar) - len(r_bar)) if ncols else 10
# format bar depending on availability of unicode/ascii chars
if ascii:
bar_length, frac_bar_length = divmod(int(frac * N_BARS * 10), 10)
bar = "#" * bar_length
frac_bar = chr(48 + frac_bar_length) if frac_bar_length else " "
else:
bar_length, frac_bar_length = divmod(int(frac * N_BARS * 8), 8)
bar = _unich(0x2588) * bar_length
frac_bar = _unich(0x2590 - frac_bar_length) if frac_bar_length else " "
# whitespace padding
if bar_length < N_BARS:
full_bar = bar + frac_bar + " " * max(N_BARS - bar_length - 1, 0)
else:
full_bar = bar + " " * max(N_BARS - bar_length, 0)
# Piece together the bar parts
return l_bar + full_bar + r_bar
# no total: no progressbar, ETA, just progress stats
else:
return ((prefix + ": ") if prefix else "") + "{0}{1} [{2}, {3}{4}]".format(
n_fmt, unit, elapsed_str, rate_fmt, postfix
)
|
def format_meter(
n,
total,
elapsed,
ncols=None,
prefix="",
ascii=False,
unit="it",
unit_scale=False,
rate=None,
bar_format=None,
postfix=None,
unit_divisor=1000,
):
"""
Return a string-based progress bar given some parameters
Parameters
----------
n : int
Number of finished iterations.
total : int
The expected total number of iterations. If meaningless (), only
basic progress statistics are displayed (no ETA).
elapsed : float
Number of seconds passed since start.
ncols : int, optional
The width of the entire output message. If specified,
dynamically resizes the progress meter to stay within this bound
[default: None]. The fallback meter width is 10 for the progress
bar + no limit for the iterations counter and statistics. If 0,
will not print any meter (only stats).
prefix : str, optional
Prefix message (included in total width) [default: ''].
ascii : bool, optional
If not set, use unicode (smooth blocks) to fill the meter
[default: False]. The fallback is to use ASCII characters
(1-9 #).
unit : str, optional
The iteration unit [default: 'it'].
unit_scale : bool, optional
If set, the number of iterations will printed with an
appropriate SI metric prefix (K = 10^3, M = 10^6, etc.)
[default: False].
rate : float, optional
Manual override for iteration rate.
If [default: None], uses n/elapsed.
bar_format : str, optional
Specify a custom bar string formatting. May impact performance.
[default: '{l_bar}{bar}{r_bar}'], where l_bar is
'{desc}{percentage:3.0f}%|' and r_bar is
'| {n_fmt}/{total_fmt} [{elapsed}<{remaining}, {rate_fmt}]'
Possible vars: bar, n, n_fmt, total, total_fmt, percentage,
rate, rate_fmt, elapsed, remaining, l_bar, r_bar, desc.
postfix : str, optional
Same as prefix but will be placed at the end as additional stats.
unit_divisor : float, optional
[default: 1000], ignored unless `unit_scale` is True.
Returns
-------
out : Formatted meter and stats, ready to display.
"""
# sanity check: total
if total and n > total:
total = None
format_interval = tqdm.format_interval
elapsed_str = format_interval(elapsed)
# if unspecified, attempt to use rate = average speed
# (we allow manual override since predicting time is an arcane art)
if rate is None and elapsed:
rate = n / elapsed
inv_rate = 1 / rate if (rate and (rate < 1)) else None
format_sizeof = tqdm.format_sizeof
rate_fmt = (
(
(
format_sizeof(inv_rate if inv_rate else rate)
if unit_scale
else "{0:5.2f}".format(inv_rate if inv_rate else rate)
)
if rate
else "?"
)
+ ("s" if inv_rate else unit)
+ "/"
+ (unit if inv_rate else "s")
)
if unit_scale:
n_fmt = format_sizeof(n, divisor=unit_divisor)
total_fmt = format_sizeof(total, divisor=unit_divisor) if total else None
else:
n_fmt = str(n)
total_fmt = str(total)
# total is known: we can predict some stats
if total:
# fractional and percentage progress
frac = n / total
percentage = frac * 100
remaining_str = format_interval((total - n) / rate) if rate else "?"
# format the stats displayed to the left and right sides of the bar
l_bar = (prefix if prefix else "") + "{0:3.0f}%|".format(percentage)
r_bar = "| {0}/{1} [{2}<{3}, {4}{5}]".format(
n_fmt,
total_fmt,
elapsed_str,
remaining_str,
rate_fmt,
", " + postfix if postfix else "",
)
if ncols == 0:
return l_bar[:-1] + r_bar[1:]
if bar_format:
# Custom bar formatting
# Populate a dict with all available progress indicators
bar_args = {
"n": n,
"n_fmt": n_fmt,
"total": total,
"total_fmt": total_fmt,
"percentage": percentage,
"rate": rate if inv_rate is None else inv_rate,
"rate_noinv": rate,
"rate_noinv_fmt": (
(format_sizeof(rate) if unit_scale else "{0:5.2f}".format(rate))
if rate
else "?"
)
+ unit
+ "/s",
"rate_fmt": rate_fmt,
"elapsed": elapsed_str,
"remaining": remaining_str,
"l_bar": l_bar,
"r_bar": r_bar,
"desc": prefix if prefix else "",
"postfix": ", " + postfix if postfix else "",
# 'bar': full_bar # replaced by procedure below
}
# Interpolate supplied bar format with the dict
if "{bar}" in bar_format:
# Format left/right sides of the bar, and format the bar
# later in the remaining space (avoid breaking display)
l_bar_user, r_bar_user = bar_format.split("{bar}")
l_bar = l_bar_user.format(**bar_args)
r_bar = r_bar_user.format(**bar_args)
else:
# Else no progress bar, we can just format and return
return bar_format.format(**bar_args)
# Formatting progress bar
# space available for bar's display
N_BARS = max(1, ncols - len(l_bar) - len(r_bar)) if ncols else 10
# format bar depending on availability of unicode/ascii chars
if ascii:
bar_length, frac_bar_length = divmod(int(frac * N_BARS * 10), 10)
bar = "#" * bar_length
frac_bar = chr(48 + frac_bar_length) if frac_bar_length else " "
else:
bar_length, frac_bar_length = divmod(int(frac * N_BARS * 8), 8)
bar = _unich(0x2588) * bar_length
frac_bar = _unich(0x2590 - frac_bar_length) if frac_bar_length else " "
# whitespace padding
if bar_length < N_BARS:
full_bar = bar + frac_bar + " " * max(N_BARS - bar_length - 1, 0)
else:
full_bar = bar + " " * max(N_BARS - bar_length, 0)
# Piece together the bar parts
return l_bar + full_bar + r_bar
# no total: no progressbar, ETA, just progress stats
else:
return (prefix if prefix else "") + "{0}{1} [{2}, {3}{4}]".format(
n_fmt, unit, elapsed_str, rate_fmt, ", " + postfix if postfix else ""
)
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def __new__(cls, *args, **kwargs):
# Create a new instance
instance = object.__new__(cls)
# Add to the list of instances
if "_instances" not in cls.__dict__:
cls._instances = WeakSet()
if "_lock" not in cls.__dict__:
cls._lock = TqdmDefaultWriteLock()
with cls._lock:
cls._instances.add(instance)
# Create the monitoring thread
if cls.monitor_interval and (cls.monitor is None or not cls.monitor.report()):
try:
cls.monitor = TMonitor(cls, cls.monitor_interval)
except Exception as e: # pragma: nocover
warn(
"tqdm:disabling monitor support"
" (monitor_interval = 0) due to:\n" + str(e),
TqdmMonitorWarning,
)
cls.monitor_interval = 0
# Return the instance
return instance
|
def __new__(cls, *args, **kwargs):
# Create a new instance
instance = object.__new__(cls)
# Add to the list of instances
if "_instances" not in cls.__dict__:
cls._instances = WeakSet()
cls._instances.add(instance)
# Create the monitoring thread
if cls.monitor_interval and (cls.monitor is None or not cls.monitor.report()):
cls.monitor = TMonitor(cls, cls.monitor_interval)
# Return the instance
return instance
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def _get_free_pos(cls, instance=None):
"""Skips specified instance"""
positions = set(abs(inst.pos) for inst in cls._instances if inst is not instance)
return min(set(range(len(positions) + 1)).difference(positions))
|
def _get_free_pos(cls, instance=None):
"""Skips specified instance"""
try:
return max(inst.pos for inst in cls._instances if inst is not instance) + 1
except ValueError as e:
if "arg is an empty sequence" in str(e):
return 0
raise # pragma: no cover
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def _decr_instances(cls, instance):
"""
Remove from list and reposition other bars
so that newer bars won't overlap previous bars
"""
with cls._lock:
try:
cls._instances.remove(instance)
except KeyError:
if not instance.gui: # pragma: no cover
raise
else:
for inst in cls._instances:
# negative `pos` means fixed
if inst.pos > abs(instance.pos):
inst.pos -= 1
# TODO: check this doesn't overwrite another fixed bar
# Kill monitor if no instances are left
if not cls._instances and cls.monitor:
try:
cls.monitor.exit()
del cls.monitor
except AttributeError: # pragma: nocover
pass
else:
cls.monitor = None
|
def _decr_instances(cls, instance):
"""
Remove from list and reposition other bars
so that newer bars won't overlap previous bars
"""
try: # in case instance was explicitly positioned, it won't be in set
cls._instances.remove(instance)
for inst in cls._instances:
if inst.pos > instance.pos:
inst.pos -= 1
# Kill monitor if no instances are left
if not cls._instances and cls.monitor:
cls.monitor.exit()
try:
del cls.monitor
except AttributeError:
pass
cls.monitor = None
except KeyError:
pass
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def write(cls, s, file=None, end="\n", nolock=False):
"""
Print a message via tqdm (without overlap with bars)
"""
fp = file if file is not None else sys.stdout
with cls.external_write_mode(file=file, nolock=nolock):
# Write the message
fp.write(s)
fp.write(end)
|
def write(cls, s, file=None, end="\n"):
"""
Print a message via tqdm (without overlap with bars)
"""
fp = file if file is not None else sys.stdout
# Clear all bars
inst_cleared = []
for inst in getattr(cls, "_instances", []):
# Clear instance if in the target output file
# or if write output + tqdm output are both either
# sys.stdout or sys.stderr (because both are mixed in terminal)
if inst.fp == fp or all(f in (sys.stdout, sys.stderr) for f in (fp, inst.fp)):
inst.clear()
inst_cleared.append(inst)
# Write the message
fp.write(s)
fp.write(end)
# Force refresh display of bars we cleared
for inst in inst_cleared:
# Avoid race conditions by checking that the instance started
if hasattr(inst, "start_t"): # pragma: nocover
inst.refresh()
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def pandas(tclass, *targs, **tkwargs):
"""
Registers the given `tqdm` class with
pandas.core.
( frame.DataFrame
| series.Series
| groupby.DataFrameGroupBy
| groupby.SeriesGroupBy
).progress_apply
A new instance will be create every time `progress_apply` is called,
and each instance will automatically close() upon completion.
Parameters
----------
targs, tkwargs : arguments for the tqdm instance
Examples
--------
>>> import pandas as pd
>>> import numpy as np
>>> from tqdm import tqdm, tqdm_gui
>>>
>>> df = pd.DataFrame(np.random.randint(0, 100, (100000, 6)))
>>> tqdm.pandas(ncols=50) # can use tqdm_gui, optional kwargs, etc
>>> # Now you can use `progress_apply` instead of `apply`
>>> df.groupby(0).progress_apply(lambda x: x**2)
References
----------
https://stackoverflow.com/questions/18603270/
progress-indicator-during-pandas-operations-python
"""
from pandas.core.frame import DataFrame
from pandas.core.series import Series
from pandas.core.groupby import DataFrameGroupBy
from pandas.core.groupby import SeriesGroupBy
from pandas.core.groupby import GroupBy
from pandas.core.groupby import PanelGroupBy
from pandas import Panel
deprecated_t = [tkwargs.pop("deprecated_t", None)]
def inner_generator(df_function="apply"):
def inner(df, func, *args, **kwargs):
"""
Parameters
----------
df : (DataFrame|Series)[GroupBy]
Data (may be grouped).
func : function
To be applied on the (grouped) data.
**kwargs : optional
Transmitted to `df.apply()`.
"""
# Precompute total iterations
total = getattr(df, "ngroups", None)
if total is None: # not grouped
if df_function == "applymap":
total = df.size
elif isinstance(df, Series):
total = len(df)
else: # DataFrame or Panel
axis = kwargs.get("axis", 0)
# when axis=0, total is shape[axis1]
total = df.size // df.shape[axis]
# Init bar
if deprecated_t[0] is not None:
t = deprecated_t[0]
deprecated_t[0] = None
else:
t = tclass(*targs, total=total, **tkwargs)
if len(args) > 0:
# *args intentionally not supported (see #244, #299)
TqdmDeprecationWarning(
"Except func, normal arguments are intentionally"
+ " not supported by"
+ " `(DataFrame|Series|GroupBy).progress_apply`."
+ " Use keyword arguments instead.",
fp_write=getattr(t.fp, "write", sys.stderr.write),
)
# Define bar updating wrapper
def wrapper(*args, **kwargs):
# update tbar correctly
# it seems `pandas apply` calls `func` twice
# on the first column/row to decide whether it can
# take a fast or slow code path; so stop when t.total==t.n
t.update(n=1 if t.total and t.n < t.total else 0)
return func(*args, **kwargs)
# Apply the provided function (in **kwargs)
# on the df using our wrapper (which provides bar updating)
result = getattr(df, df_function)(wrapper, **kwargs)
# Close bar and return pandas calculation result
t.close()
return result
return inner
# Monkeypatch pandas to provide easy methods
# Enable custom tqdm progress in pandas!
Series.progress_apply = inner_generator()
SeriesGroupBy.progress_apply = inner_generator()
Series.progress_map = inner_generator("map")
SeriesGroupBy.progress_map = inner_generator("map")
DataFrame.progress_apply = inner_generator()
DataFrameGroupBy.progress_apply = inner_generator()
DataFrame.progress_applymap = inner_generator("applymap")
Panel.progress_apply = inner_generator()
PanelGroupBy.progress_apply = inner_generator()
GroupBy.progress_apply = inner_generator()
GroupBy.progress_aggregate = inner_generator("aggregate")
GroupBy.progress_transform = inner_generator("transform")
|
def pandas(tclass, *targs, **tkwargs):
"""
Registers the given `tqdm` class with
pandas.core.
( frame.DataFrame
| series.Series
| groupby.DataFrameGroupBy
| groupby.SeriesGroupBy
).progress_apply
A new instance will be create every time `progress_apply` is called,
and each instance will automatically close() upon completion.
Parameters
----------
targs, tkwargs : arguments for the tqdm instance
Examples
--------
>>> import pandas as pd
>>> import numpy as np
>>> from tqdm import tqdm, tqdm_gui
>>>
>>> df = pd.DataFrame(np.random.randint(0, 100, (100000, 6)))
>>> tqdm.pandas(ncols=50) # can use tqdm_gui, optional kwargs, etc
>>> # Now you can use `progress_apply` instead of `apply`
>>> df.groupby(0).progress_apply(lambda x: x**2)
References
----------
https://stackoverflow.com/questions/18603270/
progress-indicator-during-pandas-operations-python
"""
from pandas.core.frame import DataFrame
from pandas.core.series import Series
from pandas.core.groupby import DataFrameGroupBy
from pandas.core.groupby import SeriesGroupBy
from pandas.core.groupby import GroupBy
from pandas.core.groupby import PanelGroupBy
from pandas import Panel
deprecated_t = [tkwargs.pop("deprecated_t", None)]
def inner_generator(df_function="apply"):
def inner(df, func, *args, **kwargs):
"""
Parameters
----------
df : (DataFrame|Series)[GroupBy]
Data (may be grouped).
func : function
To be applied on the (grouped) data.
*args, *kwargs : optional
Transmitted to `df.apply()`.
"""
# Precompute total iterations
total = getattr(df, "ngroups", None)
if total is None: # not grouped
total = len(df) if isinstance(df, Series) else df.size // len(df)
else:
total += 1 # pandas calls update once too many
# Init bar
if deprecated_t[0] is not None:
t = deprecated_t[0]
deprecated_t[0] = None
else:
t = tclass(*targs, total=total, **tkwargs)
# Define bar updating wrapper
def wrapper(*args, **kwargs):
t.update()
return func(*args, **kwargs)
# Apply the provided function (in *args and **kwargs)
# on the df using our wrapper (which provides bar updating)
result = getattr(df, df_function)(wrapper, *args, **kwargs)
# Close bar and return pandas calculation result
t.close()
return result
return inner
# Monkeypatch pandas to provide easy methods
# Enable custom tqdm progress in pandas!
Series.progress_apply = inner_generator()
SeriesGroupBy.progress_apply = inner_generator()
Series.progress_map = inner_generator("map")
SeriesGroupBy.progress_map = inner_generator("map")
DataFrame.progress_apply = inner_generator()
DataFrameGroupBy.progress_apply = inner_generator()
DataFrame.progress_applymap = inner_generator("applymap")
Panel.progress_apply = inner_generator()
PanelGroupBy.progress_apply = inner_generator()
GroupBy.progress_apply = inner_generator()
GroupBy.progress_aggregate = inner_generator("aggregate")
GroupBy.progress_transform = inner_generator("transform")
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def inner_generator(df_function="apply"):
def inner(df, func, *args, **kwargs):
"""
Parameters
----------
df : (DataFrame|Series)[GroupBy]
Data (may be grouped).
func : function
To be applied on the (grouped) data.
**kwargs : optional
Transmitted to `df.apply()`.
"""
# Precompute total iterations
total = getattr(df, "ngroups", None)
if total is None: # not grouped
if df_function == "applymap":
total = df.size
elif isinstance(df, Series):
total = len(df)
else: # DataFrame or Panel
axis = kwargs.get("axis", 0)
# when axis=0, total is shape[axis1]
total = df.size // df.shape[axis]
# Init bar
if deprecated_t[0] is not None:
t = deprecated_t[0]
deprecated_t[0] = None
else:
t = tclass(*targs, total=total, **tkwargs)
if len(args) > 0:
# *args intentionally not supported (see #244, #299)
TqdmDeprecationWarning(
"Except func, normal arguments are intentionally"
+ " not supported by"
+ " `(DataFrame|Series|GroupBy).progress_apply`."
+ " Use keyword arguments instead.",
fp_write=getattr(t.fp, "write", sys.stderr.write),
)
# Define bar updating wrapper
def wrapper(*args, **kwargs):
# update tbar correctly
# it seems `pandas apply` calls `func` twice
# on the first column/row to decide whether it can
# take a fast or slow code path; so stop when t.total==t.n
t.update(n=1 if t.total and t.n < t.total else 0)
return func(*args, **kwargs)
# Apply the provided function (in **kwargs)
# on the df using our wrapper (which provides bar updating)
result = getattr(df, df_function)(wrapper, **kwargs)
# Close bar and return pandas calculation result
t.close()
return result
return inner
|
def inner_generator(df_function="apply"):
def inner(df, func, *args, **kwargs):
"""
Parameters
----------
df : (DataFrame|Series)[GroupBy]
Data (may be grouped).
func : function
To be applied on the (grouped) data.
*args, *kwargs : optional
Transmitted to `df.apply()`.
"""
# Precompute total iterations
total = getattr(df, "ngroups", None)
if total is None: # not grouped
total = len(df) if isinstance(df, Series) else df.size // len(df)
else:
total += 1 # pandas calls update once too many
# Init bar
if deprecated_t[0] is not None:
t = deprecated_t[0]
deprecated_t[0] = None
else:
t = tclass(*targs, total=total, **tkwargs)
# Define bar updating wrapper
def wrapper(*args, **kwargs):
t.update()
return func(*args, **kwargs)
# Apply the provided function (in *args and **kwargs)
# on the df using our wrapper (which provides bar updating)
result = getattr(df, df_function)(wrapper, *args, **kwargs)
# Close bar and return pandas calculation result
t.close()
return result
return inner
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def inner(df, func, *args, **kwargs):
"""
Parameters
----------
df : (DataFrame|Series)[GroupBy]
Data (may be grouped).
func : function
To be applied on the (grouped) data.
**kwargs : optional
Transmitted to `df.apply()`.
"""
# Precompute total iterations
total = getattr(df, "ngroups", None)
if total is None: # not grouped
if df_function == "applymap":
total = df.size
elif isinstance(df, Series):
total = len(df)
else: # DataFrame or Panel
axis = kwargs.get("axis", 0)
# when axis=0, total is shape[axis1]
total = df.size // df.shape[axis]
# Init bar
if deprecated_t[0] is not None:
t = deprecated_t[0]
deprecated_t[0] = None
else:
t = tclass(*targs, total=total, **tkwargs)
if len(args) > 0:
# *args intentionally not supported (see #244, #299)
TqdmDeprecationWarning(
"Except func, normal arguments are intentionally"
+ " not supported by"
+ " `(DataFrame|Series|GroupBy).progress_apply`."
+ " Use keyword arguments instead.",
fp_write=getattr(t.fp, "write", sys.stderr.write),
)
# Define bar updating wrapper
def wrapper(*args, **kwargs):
# update tbar correctly
# it seems `pandas apply` calls `func` twice
# on the first column/row to decide whether it can
# take a fast or slow code path; so stop when t.total==t.n
t.update(n=1 if t.total and t.n < t.total else 0)
return func(*args, **kwargs)
# Apply the provided function (in **kwargs)
# on the df using our wrapper (which provides bar updating)
result = getattr(df, df_function)(wrapper, **kwargs)
# Close bar and return pandas calculation result
t.close()
return result
|
def inner(df, func, *args, **kwargs):
"""
Parameters
----------
df : (DataFrame|Series)[GroupBy]
Data (may be grouped).
func : function
To be applied on the (grouped) data.
*args, *kwargs : optional
Transmitted to `df.apply()`.
"""
# Precompute total iterations
total = getattr(df, "ngroups", None)
if total is None: # not grouped
total = len(df) if isinstance(df, Series) else df.size // len(df)
else:
total += 1 # pandas calls update once too many
# Init bar
if deprecated_t[0] is not None:
t = deprecated_t[0]
deprecated_t[0] = None
else:
t = tclass(*targs, total=total, **tkwargs)
# Define bar updating wrapper
def wrapper(*args, **kwargs):
t.update()
return func(*args, **kwargs)
# Apply the provided function (in *args and **kwargs)
# on the df using our wrapper (which provides bar updating)
result = getattr(df, df_function)(wrapper, *args, **kwargs)
# Close bar and return pandas calculation result
t.close()
return result
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def wrapper(*args, **kwargs):
# update tbar correctly
# it seems `pandas apply` calls `func` twice
# on the first column/row to decide whether it can
# take a fast or slow code path; so stop when t.total==t.n
t.update(n=1 if t.total and t.n < t.total else 0)
return func(*args, **kwargs)
|
def wrapper(*args, **kwargs):
t.update()
return func(*args, **kwargs)
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def __init__(
self,
iterable=None,
desc=None,
total=None,
leave=True,
file=None,
ncols=None,
mininterval=0.1,
maxinterval=10.0,
miniters=None,
ascii=None,
disable=False,
unit="it",
unit_scale=False,
dynamic_ncols=False,
smoothing=0.3,
bar_format=None,
initial=0,
position=None,
postfix=None,
unit_divisor=1000,
gui=False,
**kwargs,
):
"""
Parameters
----------
iterable : iterable, optional
Iterable to decorate with a progressbar.
Leave blank to manually manage the updates.
desc : str, optional
Prefix for the progressbar.
total : int, optional
The number of expected iterations. If unspecified,
len(iterable) is used if possible. As a last resort, only basic
progress statistics are displayed (no ETA, no progressbar).
If `gui` is True and this parameter needs subsequent updating,
specify an initial arbitrary large positive integer,
e.g. int(9e9).
leave : bool, optional
If [default: True], keeps all traces of the progressbar
upon termination of iteration.
file : `io.TextIOWrapper` or `io.StringIO`, optional
Specifies where to output the progress messages
(default: sys.stderr). Uses `file.write(str)` and `file.flush()`
methods.
ncols : int, optional
The width of the entire output message. If specified,
dynamically resizes the progressbar to stay within this bound.
If unspecified, attempts to use environment width. The
fallback is a meter width of 10 and no limit for the counter and
statistics. If 0, will not print any meter (only stats).
mininterval : float, optional
Minimum progress display update interval, in seconds [default: 0.1].
maxinterval : float, optional
Maximum progress display update interval, in seconds [default: 10].
Automatically adjusts `miniters` to correspond to `mininterval`
after long display update lag. Only works if `dynamic_miniters`
or monitor thread is enabled.
miniters : int, optional
Minimum progress display update interval, in iterations.
If 0 and `dynamic_miniters`, will automatically adjust to equal
`mininterval` (more CPU efficient, good for tight loops).
If > 0, will skip display of specified number of iterations.
Tweak this and `mininterval` to get very efficient loops.
If your progress is erratic with both fast and slow iterations
(network, skipping items, etc) you should set miniters=1.
ascii : bool, optional
If unspecified or False, use unicode (smooth blocks) to fill
the meter. The fallback is to use ASCII characters `1-9 #`.
disable : bool, optional
Whether to disable the entire progressbar wrapper
[default: False]. If set to None, disable on non-TTY.
unit : str, optional
String that will be used to define the unit of each iteration
[default: it].
unit_scale : bool or int or float, optional
If 1 or True, the number of iterations will be reduced/scaled
automatically and a metric prefix following the
International System of Units standard will be added
(kilo, mega, etc.) [default: False]. If any other non-zero
number, will scale `total` and `n`.
dynamic_ncols : bool, optional
If set, constantly alters `ncols` to the environment (allowing
for window resizes) [default: False].
smoothing : float, optional
Exponential moving average smoothing factor for speed estimates
(ignored in GUI mode). Ranges from 0 (average speed) to 1
(current/instantaneous speed) [default: 0.3].
bar_format : str, optional
Specify a custom bar string formatting. May impact performance.
[default: '{l_bar}{bar}{r_bar}'], where
l_bar='{desc}: {percentage:3.0f}%|' and
r_bar='| {n_fmt}/{total_fmt} [{elapsed}<{remaining}, '
'{rate_fmt}{postfix}]'
Possible vars: l_bar, bar, r_bar, n, n_fmt, total, total_fmt,
percentage, rate, rate_fmt, rate_noinv, rate_noinv_fmt,
rate_inv, rate_inv_fmt, elapsed, remaining, desc, postfix.
Note that a trailing ": " is automatically removed after {desc}
if the latter is empty.
initial : int, optional
The initial counter value. Useful when restarting a progress
bar [default: 0].
position : int, optional
Specify the line offset to print this bar (starting from 0)
Automatic if unspecified.
Useful to manage multiple bars at once (eg, from threads).
postfix : dict or *, optional
Specify additional stats to display at the end of the bar.
Calls `set_postfix(**postfix)` if possible (dict).
unit_divisor : float, optional
[default: 1000], ignored unless `unit_scale` is True.
gui : bool, optional
WARNING: internal parameter - do not use.
Use tqdm_gui(...) instead. If set, will attempt to use
matplotlib animations for a graphical output [default: False].
Returns
-------
out : decorated iterator.
"""
if file is None:
file = sys.stderr
if disable is None and hasattr(file, "isatty") and not file.isatty():
disable = True
if disable:
self.iterable = iterable
self.disable = disable
self.pos = self._get_free_pos(self)
self._instances.remove(self)
self.n = initial
return
if kwargs:
self.disable = True
self.pos = self._get_free_pos(self)
self._instances.remove(self)
raise (
TqdmDeprecationWarning(
"""\
`nested` is deprecated and automated. Use position instead for manual control.
""",
fp_write=getattr(file, "write", sys.stderr.write),
)
if "nested" in kwargs
else TqdmKeyError("Unknown argument(s): " + str(kwargs))
)
# Preprocess the arguments
if total is None and iterable is not None:
try:
total = len(iterable)
except (TypeError, AttributeError):
total = None
if (
(ncols is None) and (file in (sys.stderr, sys.stdout))
) or dynamic_ncols: # pragma: no cover
if dynamic_ncols:
dynamic_ncols = _environ_cols_wrapper()
if dynamic_ncols:
ncols = dynamic_ncols(file)
# elif ncols is not None:
# ncols = 79
else:
_dynamic_ncols = _environ_cols_wrapper()
if _dynamic_ncols:
ncols = _dynamic_ncols(file)
# else:
# ncols = 79
if miniters is None:
miniters = 0
dynamic_miniters = True
else:
dynamic_miniters = False
if mininterval is None:
mininterval = 0
if maxinterval is None:
maxinterval = 0
if ascii is None:
ascii = not _supports_unicode(file)
if bar_format and not ascii:
# Convert bar format into unicode since terminal uses unicode
bar_format = _unicode(bar_format)
if smoothing is None:
smoothing = 0
# Store the arguments
self.iterable = iterable
self.desc = desc or ""
self.total = total
self.leave = leave
self.fp = file
self.ncols = ncols
self.mininterval = mininterval
self.maxinterval = maxinterval
self.miniters = miniters
self.dynamic_miniters = dynamic_miniters
self.ascii = ascii
self.disable = disable
self.unit = unit
self.unit_scale = unit_scale
self.unit_divisor = unit_divisor
self.gui = gui
self.dynamic_ncols = dynamic_ncols
self.smoothing = smoothing
self.avg_time = None
self._time = time
self.bar_format = bar_format
self.postfix = None
if postfix:
try:
self.set_postfix(refresh=False, **postfix)
except TypeError:
self.postfix = postfix
# Init the iterations counters
self.last_print_n = initial
self.n = initial
# if nested, at initial sp() call we replace '\r' by '\n' to
# not overwrite the outer progress bar
if position is None:
self.pos = self._get_free_pos(self)
else: # mark fixed positions as negative
self.pos = -position
if not gui:
# Initialize the screen printer
self.sp = self.status_printer(self.fp)
with self._lock:
if self.pos:
self.moveto(abs(self.pos))
self.sp(self.__repr__(elapsed=0))
if self.pos:
self.moveto(-abs(self.pos))
# Init the time counter
self.last_print_t = self._time()
# NB: Avoid race conditions by setting start_t at the very end of init
self.start_t = self.last_print_t
|
def __init__(
self,
iterable=None,
desc=None,
total=None,
leave=True,
file=None,
ncols=None,
mininterval=0.1,
maxinterval=10.0,
miniters=None,
ascii=None,
disable=False,
unit="it",
unit_scale=False,
dynamic_ncols=False,
smoothing=0.3,
bar_format=None,
initial=0,
position=None,
postfix=None,
unit_divisor=1000,
gui=False,
**kwargs,
):
"""
Parameters
----------
iterable : iterable, optional
Iterable to decorate with a progressbar.
Leave blank to manually manage the updates.
desc : str, optional
Prefix for the progressbar.
total : int, optional
The number of expected iterations. If unspecified,
len(iterable) is used if possible. As a last resort, only basic
progress statistics are displayed (no ETA, no progressbar).
If `gui` is True and this parameter needs subsequent updating,
specify an initial arbitrary large positive integer,
e.g. int(9e9).
leave : bool, optional
If [default: True], keeps all traces of the progressbar
upon termination of iteration.
file : `io.TextIOWrapper` or `io.StringIO`, optional
Specifies where to output the progress messages
(default: sys.stderr). Uses `file.write(str)` and `file.flush()`
methods.
ncols : int, optional
The width of the entire output message. If specified,
dynamically resizes the progressbar to stay within this bound.
If unspecified, attempts to use environment width. The
fallback is a meter width of 10 and no limit for the counter and
statistics. If 0, will not print any meter (only stats).
mininterval : float, optional
Minimum progress display update interval, in seconds [default: 0.1].
maxinterval : float, optional
Maximum progress display update interval, in seconds [default: 10].
Automatically adjusts `miniters` to correspond to `mininterval`
after long display update lag. Only works if `dynamic_miniters`
or monitor thread is enabled.
miniters : int, optional
Minimum progress display update interval, in iterations.
If 0 and `dynamic_miniters`, will automatically adjust to equal
`mininterval` (more CPU efficient, good for tight loops).
If > 0, will skip display of specified number of iterations.
Tweak this and `mininterval` to get very efficient loops.
If your progress is erratic with both fast and slow iterations
(network, skipping items, etc) you should set miniters=1.
ascii : bool, optional
If unspecified or False, use unicode (smooth blocks) to fill
the meter. The fallback is to use ASCII characters `1-9 #`.
disable : bool, optional
Whether to disable the entire progressbar wrapper
[default: False]. If set to None, disable on non-TTY.
unit : str, optional
String that will be used to define the unit of each iteration
[default: it].
unit_scale : bool, optional
If set, the number of iterations will be reduced/scaled
automatically and a metric prefix following the
International System of Units standard will be added
(kilo, mega, etc.) [default: False].
dynamic_ncols : bool, optional
If set, constantly alters `ncols` to the environment (allowing
for window resizes) [default: False].
smoothing : float, optional
Exponential moving average smoothing factor for speed estimates
(ignored in GUI mode). Ranges from 0 (average speed) to 1
(current/instantaneous speed) [default: 0.3].
bar_format : str, optional
Specify a custom bar string formatting. May impact performance.
If unspecified, will use '{l_bar}{bar}{r_bar}', where l_bar is
'{desc}{percentage:3.0f}%|' and r_bar is
'| {n_fmt}/{total_fmt} [{elapsed}<{remaining}, {rate_fmt}]'
Possible vars: bar, n, n_fmt, total, total_fmt, percentage,
rate, rate_fmt, elapsed, remaining, l_bar, r_bar, desc.
initial : int, optional
The initial counter value. Useful when restarting a progress
bar [default: 0].
position : int, optional
Specify the line offset to print this bar (starting from 0)
Automatic if unspecified.
Useful to manage multiple bars at once (eg, from threads).
postfix : dict, optional
Specify additional stats to display at the end of the bar.
unit_divisor : float, optional
[default: 1000], ignored unless `unit_scale` is True.
gui : bool, optional
WARNING: internal parameter - do not use.
Use tqdm_gui(...) instead. If set, will attempt to use
matplotlib animations for a graphical output [default: False].
Returns
-------
out : decorated iterator.
"""
if disable is None and hasattr(file, "isatty") and not file.isatty():
disable = True
if disable:
self.iterable = iterable
self.disable = disable
self.pos = self._get_free_pos(self)
self._instances.remove(self)
return
if file is None:
file = sys.stderr
if kwargs:
self.disable = True
self.pos = self._get_free_pos(self)
self._instances.remove(self)
raise (
TqdmDeprecationWarning(
"""\
`nested` is deprecated and automated. Use position instead for manual control.
""",
fp_write=getattr(file, "write", sys.stderr.write),
)
if "nested" in kwargs
else TqdmKeyError("Unknown argument(s): " + str(kwargs))
)
# Preprocess the arguments
if total is None and iterable is not None:
try:
total = len(iterable)
except (TypeError, AttributeError):
total = None
if (
(ncols is None) and (file in (sys.stderr, sys.stdout))
) or dynamic_ncols: # pragma: no cover
if dynamic_ncols:
dynamic_ncols = _environ_cols_wrapper()
if dynamic_ncols:
ncols = dynamic_ncols(file)
# elif ncols is not None:
# ncols = 79
else:
_dynamic_ncols = _environ_cols_wrapper()
if _dynamic_ncols:
ncols = _dynamic_ncols(file)
# else:
# ncols = 79
if miniters is None:
miniters = 0
dynamic_miniters = True
else:
dynamic_miniters = False
if mininterval is None:
mininterval = 0
if maxinterval is None:
maxinterval = 0
if ascii is None:
ascii = not _supports_unicode(file)
if bar_format and not ascii:
# Convert bar format into unicode since terminal uses unicode
bar_format = _unicode(bar_format)
if smoothing is None:
smoothing = 0
# Store the arguments
self.iterable = iterable
self.desc = desc + ": " if desc else ""
self.total = total
self.leave = leave
self.fp = file
self.ncols = ncols
self.mininterval = mininterval
self.maxinterval = maxinterval
self.miniters = miniters
self.dynamic_miniters = dynamic_miniters
self.ascii = ascii
self.disable = disable
self.unit = unit
self.unit_scale = unit_scale
self.unit_divisor = unit_divisor
self.gui = gui
self.dynamic_ncols = dynamic_ncols
self.smoothing = smoothing
self.avg_time = None
self._time = time
self.bar_format = bar_format
self.postfix = None
if postfix:
self.set_postfix(**postfix)
# Init the iterations counters
self.last_print_n = initial
self.n = initial
# if nested, at initial sp() call we replace '\r' by '\n' to
# not overwrite the outer progress bar
if position is None:
self.pos = self._get_free_pos(self)
else:
self.pos = position
self._instances.remove(self)
if not gui:
# Initialize the screen printer
self.sp = self.status_printer(self.fp)
if self.pos:
self.moveto(self.pos)
self.sp(
self.format_meter(
self.n,
total,
0,
(dynamic_ncols(file) if dynamic_ncols else ncols),
self.desc,
ascii,
unit,
unit_scale,
None,
bar_format,
self.postfix,
unit_divisor,
)
)
if self.pos:
self.moveto(-self.pos)
# Init the time counter
self.last_print_t = self._time()
# NB: Avoid race conditions by setting start_t at the very end of init
self.start_t = self.last_print_t
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def __repr__(self, elapsed=None):
return self.format_meter(
self.n,
self.total,
elapsed if elapsed is not None else self._time() - self.start_t,
self.dynamic_ncols(self.fp) if self.dynamic_ncols else self.ncols,
self.desc,
self.ascii,
self.unit,
self.unit_scale,
1 / self.avg_time if self.avg_time else None,
self.bar_format,
self.postfix,
self.unit_divisor,
)
|
def __repr__(self):
return self.format_meter(
self.n,
self.total,
self._time() - self.start_t,
self.dynamic_ncols(self.fp) if self.dynamic_ncols else self.ncols,
self.desc,
self.ascii,
self.unit,
self.unit_scale,
1 / self.avg_time if self.avg_time else None,
self.bar_format,
self.postfix,
)
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def __lt__(self, other):
return abs(self.pos) < abs(other.pos)
|
def __lt__(self, other):
return self.pos < other.pos
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def __eq__(self, other):
return abs(self.pos) == abs(other.pos)
|
def __eq__(self, other):
return self.pos == other.pos
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def __iter__(self):
"""Backward-compatibility to use: for x in tqdm(iterable)"""
# Inlining instance variables as locals (speed optimisation)
iterable = self.iterable
# If the bar is disabled, then just walk the iterable
# (note: keep this check outside the loop for performance)
if self.disable:
for obj in iterable:
yield obj
else:
mininterval = self.mininterval
maxinterval = self.maxinterval
miniters = self.miniters
dynamic_miniters = self.dynamic_miniters
last_print_t = self.last_print_t
last_print_n = self.last_print_n
n = self.n
smoothing = self.smoothing
avg_time = self.avg_time
_time = self._time
try:
sp = self.sp
except AttributeError:
raise TqdmDeprecationWarning(
"""\
Please use `tqdm_gui(...)` instead of `tqdm(..., gui=True)`
""",
fp_write=getattr(self.fp, "write", sys.stderr.write),
)
for obj in iterable:
yield obj
# Update and possibly print the progressbar.
# Note: does not call self.update(1) for speed optimisation.
n += 1
# check counter first to avoid calls to time()
if n - last_print_n >= self.miniters:
miniters = self.miniters # watch monitoring thread changes
delta_t = _time() - last_print_t
if delta_t >= mininterval:
cur_t = _time()
delta_it = n - last_print_n
# EMA (not just overall average)
if smoothing and delta_t and delta_it:
avg_time = (
delta_t / delta_it
if avg_time is None
else smoothing * delta_t / delta_it
+ (1 - smoothing) * avg_time
)
self.n = n
with self._lock:
if self.pos:
self.moveto(abs(self.pos))
# Print bar update
sp(self.__repr__())
if self.pos:
self.moveto(-abs(self.pos))
# If no `miniters` was specified, adjust automatically
# to the max iteration rate seen so far between 2 prints
if dynamic_miniters:
if maxinterval and delta_t >= maxinterval:
# Adjust miniters to time interval by rule of 3
if mininterval:
# Set miniters to correspond to mininterval
miniters = delta_it * mininterval / delta_t
else:
# Set miniters to correspond to maxinterval
miniters = delta_it * maxinterval / delta_t
elif smoothing:
# EMA-weight miniters to converge
# towards the timeframe of mininterval
miniters = (
smoothing
* delta_it
* (
mininterval / delta_t
if mininterval and delta_t
else 1
)
+ (1 - smoothing) * miniters
)
else:
# Maximum nb of iterations between 2 prints
miniters = max(miniters, delta_it)
# Store old values for next call
self.n = self.last_print_n = last_print_n = n
self.last_print_t = last_print_t = cur_t
self.miniters = miniters
# Closing the progress bar.
# Update some internal variables for close().
self.last_print_n = last_print_n
self.n = n
self.miniters = miniters
self.close()
|
def __iter__(self):
"""Backward-compatibility to use: for x in tqdm(iterable)"""
# Inlining instance variables as locals (speed optimisation)
iterable = self.iterable
# If the bar is disabled, then just walk the iterable
# (note: keep this check outside the loop for performance)
if self.disable:
for obj in iterable:
yield obj
else:
ncols = self.ncols
mininterval = self.mininterval
maxinterval = self.maxinterval
miniters = self.miniters
dynamic_miniters = self.dynamic_miniters
unit = self.unit
unit_scale = self.unit_scale
unit_divisor = self.unit_divisor
ascii = self.ascii
start_t = self.start_t
last_print_t = self.last_print_t
last_print_n = self.last_print_n
n = self.n
dynamic_ncols = self.dynamic_ncols
smoothing = self.smoothing
avg_time = self.avg_time
bar_format = self.bar_format
_time = self._time
format_meter = self.format_meter
try:
sp = self.sp
except AttributeError:
raise TqdmDeprecationWarning(
"""\
Please use `tqdm_gui(...)` instead of `tqdm(..., gui=True)`
""",
fp_write=getattr(self.fp, "write", sys.stderr.write),
)
for obj in iterable:
yield obj
# Update and print the progressbar.
# Note: does not call self.update(1) for speed optimisation.
n += 1
# check the counter first (avoid calls to time())
if n - last_print_n >= self.miniters:
miniters = self.miniters # watch monitoring thread changes
delta_t = _time() - last_print_t
if delta_t >= mininterval:
cur_t = _time()
delta_it = n - last_print_n
elapsed = cur_t - start_t # optimised if in inner loop
# EMA (not just overall average)
if smoothing and delta_t and delta_it:
avg_time = (
delta_t / delta_it
if avg_time is None
else smoothing * delta_t / delta_it
+ (1 - smoothing) * avg_time
)
if self.pos:
self.moveto(self.pos)
# Printing the bar's update
sp(
format_meter(
n,
self.total,
elapsed,
(dynamic_ncols(self.fp) if dynamic_ncols else ncols),
self.desc,
ascii,
unit,
unit_scale,
1 / avg_time if avg_time else None,
bar_format,
self.postfix,
unit_divisor,
)
)
if self.pos:
self.moveto(-self.pos)
# If no `miniters` was specified, adjust automatically
# to the max iteration rate seen so far between 2 prints
if dynamic_miniters:
if maxinterval and delta_t >= maxinterval:
# Adjust miniters to time interval by rule of 3
if mininterval:
# Set miniters to correspond to mininterval
miniters = delta_it * mininterval / delta_t
else:
# Set miniters to correspond to maxinterval
miniters = delta_it * maxinterval / delta_t
elif smoothing:
# EMA-weight miniters to converge
# towards the timeframe of mininterval
miniters = (
smoothing
* delta_it
* (
mininterval / delta_t
if mininterval and delta_t
else 1
)
+ (1 - smoothing) * miniters
)
else:
# Maximum nb of iterations between 2 prints
miniters = max(miniters, delta_it)
# Store old values for next call
self.n = self.last_print_n = last_print_n = n
self.last_print_t = last_print_t = cur_t
self.miniters = miniters
# Closing the progress bar.
# Update some internal variables for close().
self.last_print_n = last_print_n
self.n = n
self.miniters = miniters
self.close()
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def update(self, n=1):
"""
Manually update the progress bar, useful for streams
such as reading files.
E.g.:
>>> t = tqdm(total=filesize) # Initialise
>>> for current_buffer in stream:
... ...
... t.update(len(current_buffer))
>>> t.close()
The last line is highly recommended, but possibly not necessary if
`t.update()` will be called in such a way that `filesize` will be
exactly reached and printed.
Parameters
----------
n : int, optional
Increment to add to the internal counter of iterations
[default: 1].
"""
# N.B.: see __iter__() for more comments.
if self.disable:
return
if n < 0:
raise ValueError("n ({0}) cannot be negative".format(n))
self.n += n
# check counter first to reduce calls to time()
if self.n - self.last_print_n >= self.miniters:
delta_t = self._time() - self.last_print_t
if delta_t >= self.mininterval:
cur_t = self._time()
delta_it = self.n - self.last_print_n # >= n
# elapsed = cur_t - self.start_t
# EMA (not just overall average)
if self.smoothing and delta_t and delta_it:
self.avg_time = (
delta_t / delta_it
if self.avg_time is None
else self.smoothing * delta_t / delta_it
+ (1 - self.smoothing) * self.avg_time
)
if not hasattr(self, "sp"):
raise TqdmDeprecationWarning(
"""\
Please use `tqdm_gui(...)` instead of `tqdm(..., gui=True)`
""",
fp_write=getattr(self.fp, "write", sys.stderr.write),
)
with self._lock:
if self.pos:
self.moveto(abs(self.pos))
# Print bar update
self.sp(self.__repr__())
if self.pos:
self.moveto(-abs(self.pos))
# If no `miniters` was specified, adjust automatically to the
# maximum iteration rate seen so far between two prints.
# e.g.: After running `tqdm.update(5)`, subsequent
# calls to `tqdm.update()` will only cause an update after
# at least 5 more iterations.
if self.dynamic_miniters:
if self.maxinterval and delta_t >= self.maxinterval:
if self.mininterval:
self.miniters = delta_it * self.mininterval / delta_t
else:
self.miniters = delta_it * self.maxinterval / delta_t
elif self.smoothing:
self.miniters = (
self.smoothing
* delta_it
* (
self.mininterval / delta_t
if self.mininterval and delta_t
else 1
)
+ (1 - self.smoothing) * self.miniters
)
else:
self.miniters = max(self.miniters, delta_it)
# Store old values for next call
self.last_print_n = self.n
self.last_print_t = cur_t
|
def update(self, n=1):
"""
Manually update the progress bar, useful for streams
such as reading files.
E.g.:
>>> t = tqdm(total=filesize) # Initialise
>>> for current_buffer in stream:
... ...
... t.update(len(current_buffer))
>>> t.close()
The last line is highly recommended, but possibly not necessary if
`t.update()` will be called in such a way that `filesize` will be
exactly reached and printed.
Parameters
----------
n : int
Increment to add to the internal counter of iterations
[default: 1].
"""
if self.disable:
return
if n < 0:
raise ValueError("n ({0}) cannot be negative".format(n))
self.n += n
if self.n - self.last_print_n >= self.miniters:
# We check the counter first, to reduce the overhead of time()
delta_t = self._time() - self.last_print_t
if delta_t >= self.mininterval:
cur_t = self._time()
delta_it = self.n - self.last_print_n # should be n?
# elapsed = cur_t - self.start_t
# EMA (not just overall average)
if self.smoothing and delta_t and delta_it:
self.avg_time = (
delta_t / delta_it
if self.avg_time is None
else self.smoothing * delta_t / delta_it
+ (1 - self.smoothing) * self.avg_time
)
if not hasattr(self, "sp"):
raise TqdmDeprecationWarning(
"""\
Please use `tqdm_gui(...)` instead of `tqdm(..., gui=True)`
""",
fp_write=getattr(self.fp, "write", sys.stderr.write),
)
if self.pos:
self.moveto(self.pos)
# Print bar's update
self.sp(self.__repr__())
if self.pos:
self.moveto(-self.pos)
# If no `miniters` was specified, adjust automatically to the
# maximum iteration rate seen so far between two prints.
# e.g.: After running `tqdm.update(5)`, subsequent
# calls to `tqdm.update()` will only cause an update after
# at least 5 more iterations.
if self.dynamic_miniters:
if self.maxinterval and delta_t >= self.maxinterval:
if self.mininterval:
self.miniters = delta_it * self.mininterval / delta_t
else:
self.miniters = delta_it * self.maxinterval / delta_t
elif self.smoothing:
self.miniters = (
self.smoothing
* delta_it
* (
self.mininterval / delta_t
if self.mininterval and delta_t
else 1
)
+ (1 - self.smoothing) * self.miniters
)
else:
self.miniters = max(self.miniters, delta_it)
# Store old values for next call
self.last_print_n = self.n
self.last_print_t = cur_t
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def close(self):
"""
Cleanup and (if leave=False) close the progressbar.
"""
if self.disable:
return
# Prevent multiple closures
self.disable = True
# decrement instance pos and remove from internal set
pos = abs(self.pos)
self._decr_instances(self)
# GUI mode
if not hasattr(self, "sp"):
return
# annoyingly, _supports_unicode isn't good enough
def fp_write(s):
self.fp.write(_unicode(s))
try:
fp_write("")
except ValueError as e:
if "closed" in str(e):
return
raise # pragma: no cover
with self._lock:
if pos:
self.moveto(pos)
if self.leave:
if self.last_print_n < self.n:
# stats for overall rate (no weighted average)
self.avg_time = None
self.sp(self.__repr__())
if pos:
self.moveto(-pos)
else:
fp_write("\n")
else:
self.sp("") # clear up last bar
if pos:
self.moveto(-pos)
else:
fp_write("\r")
|
def close(self):
"""
Cleanup and (if leave=False) close the progressbar.
"""
if self.disable:
return
# Prevent multiple closures
self.disable = True
# decrement instance pos and remove from internal set
pos = self.pos
self._decr_instances(self)
# GUI mode
if not hasattr(self, "sp"):
return
# annoyingly, _supports_unicode isn't good enough
def fp_write(s):
self.fp.write(_unicode(s))
try:
fp_write("")
except ValueError as e:
if "closed" in str(e):
return
raise # pragma: no cover
if pos:
self.moveto(pos)
if self.leave:
if self.last_print_n < self.n:
cur_t = self._time()
# stats for overall rate (no weighted average)
self.sp(
self.format_meter(
self.n,
self.total,
cur_t - self.start_t,
(self.dynamic_ncols(self.fp) if self.dynamic_ncols else self.ncols),
self.desc,
self.ascii,
self.unit,
self.unit_scale,
None,
self.bar_format,
self.postfix,
self.unit_divisor,
)
)
if pos:
self.moveto(-pos)
else:
fp_write("\n")
else:
self.sp("") # clear up last bar
if pos:
self.moveto(-pos)
else:
fp_write("\r")
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def set_description(self, desc=None, refresh=True):
"""
Set/modify description of the progress bar.
Parameters
----------
desc : str, optional
refresh : bool, optional
Forces refresh [default: True].
"""
self.desc = desc + ": " if desc else ""
if refresh:
self.refresh()
|
def set_description(self, desc=None):
"""
Set/modify description of the progress bar.
"""
self.desc = desc + ": " if desc else ""
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def set_postfix(self, ordered_dict=None, refresh=True, **kwargs):
"""
Set/modify postfix (additional stats)
with automatic formatting based on datatype.
Parameters
----------
ordered_dict : dict or OrderedDict, optional
refresh : bool, optional
Forces refresh [default: True].
kwargs : dict, optional
"""
# Sort in alphabetical order to be more deterministic
postfix = _OrderedDict([] if ordered_dict is None else ordered_dict)
for key in sorted(kwargs.keys()):
postfix[key] = kwargs[key]
# Preprocess stats according to datatype
for key in postfix.keys():
# Number: limit the length of the string
if isinstance(postfix[key], Number):
postfix[key] = "{0:2.3g}".format(postfix[key])
# Else for any other type, try to get the string conversion
elif not isinstance(postfix[key], _basestring):
postfix[key] = str(postfix[key])
# Else if it's a string, don't need to preprocess anything
# Stitch together to get the final postfix
self.postfix = ", ".join(key + "=" + postfix[key].strip() for key in postfix.keys())
if refresh:
self.refresh()
|
def set_postfix(self, ordered_dict=None, **kwargs):
"""
Set/modify postfix (additional stats)
with automatic formatting based on datatype.
"""
# Sort in alphabetical order to be more deterministic
postfix = _OrderedDict([] if ordered_dict is None else ordered_dict)
for key in sorted(kwargs.keys()):
postfix[key] = kwargs[key]
# Preprocess stats according to datatype
for key in postfix.keys():
# Number: limit the length of the string
if isinstance(postfix[key], Number):
postfix[key] = "{0:2.3g}".format(postfix[key])
# Else for any other type, try to get the string conversion
elif not isinstance(postfix[key], _basestring):
postfix[key] = str(postfix[key])
# Else if it's a string, don't need to preprocess anything
# Stitch together to get the final postfix
self.postfix = ", ".join(key + "=" + postfix[key].strip() for key in postfix.keys())
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def moveto(self, n):
self.fp.write(_unicode("\n" * n + _term_move_up() * -n))
self.fp.flush()
|
def moveto(self, n):
self.fp.write(_unicode("\n" * n + _term_move_up() * -n))
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def clear(self, nolock=False):
"""
Clear current bar display
"""
if self.disable:
return
if not nolock:
self._lock.acquire()
self.moveto(abs(self.pos))
self.sp("")
self.fp.write("\r") # place cursor back at the beginning of line
self.moveto(-abs(self.pos))
if not nolock:
self._lock.release()
|
def clear(self, nomove=False):
"""
Clear current bar display
"""
if self.disable:
return
if not nomove:
self.moveto(self.pos)
# clear up the bar (can't rely on sp(''))
self.fp.write("\r")
self.fp.write(" " * (self.ncols if self.ncols else 10))
self.fp.write("\r") # place cursor back at the beginning of line
if not nomove:
self.moveto(-self.pos)
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def refresh(self, nolock=False):
"""
Force refresh the display of this bar
"""
if self.disable:
return
if not nolock:
self._lock.acquire()
self.moveto(abs(self.pos))
self.sp(self.__repr__())
self.moveto(-abs(self.pos))
if not nolock:
self._lock.release()
|
def refresh(self):
"""
Force refresh the display of this bar
"""
if self.disable:
return
self.moveto(self.pos)
# clear up this line's content (whatever there was)
self.clear(nomove=True)
# Print current/last bar state
self.fp.write(self.__repr__())
self.moveto(-self.pos)
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def _is_utf(encoding):
try:
"\u2588\u2589".encode(encoding)
except UnicodeEncodeError: # pragma: no cover
return False
except Exception: # pragma: no cover
try:
return encoding.lower().startswith("utf-") or ("U8" == encoding)
except:
return False
else:
return True
|
def _is_utf(encoding):
return encoding.lower().startswith("utf-") or ("U8" == encoding)
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def _supports_unicode(fp):
try:
return _is_utf(fp.encoding)
except AttributeError:
return False
|
def _supports_unicode(file):
return (
_is_utf(file.encoding)
if (
getattr(file, "encoding", None)
or
# FakeStreams from things like bpython-curses can lie
getattr(file, "interface", None)
)
else False
) # pragma: no cover
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def _environ_cols_windows(fp): # pragma: no cover
try:
from ctypes import windll, create_string_buffer
import struct
from sys import stdin, stdout
io_handle = -12 # assume stderr
if fp == stdin:
io_handle = -10
elif fp == stdout:
io_handle = -11
h = windll.kernel32.GetStdHandle(io_handle)
csbi = create_string_buffer(22)
res = windll.kernel32.GetConsoleScreenBufferInfo(h, csbi)
if res:
(
_bufx,
_bufy,
_curx,
_cury,
_wattr,
left,
_top,
right,
_bottom,
_maxx,
_maxy,
) = struct.unpack("hhhhHhhhhhh", csbi.raw)
# nlines = bottom - top + 1
return right - left # +1
except:
pass
return None
|
def _environ_cols_windows(fp): # pragma: no cover
try:
from ctypes import windll, create_string_buffer
import struct
from sys import stdin, stdout
io_handle = None
if fp == stdin:
io_handle = -10
elif fp == stdout:
io_handle = -11
else: # assume stderr
io_handle = -12
h = windll.kernel32.GetStdHandle(io_handle)
csbi = create_string_buffer(22)
res = windll.kernel32.GetConsoleScreenBufferInfo(h, csbi)
if res:
(
_bufx,
_bufy,
_curx,
_cury,
_wattr,
left,
_top,
right,
_bottom,
_maxx,
_maxy,
) = struct.unpack("hhhhHhhhhhh", csbi.raw)
# nlines = bottom - top + 1
return right - left # +1
except:
pass
return None
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def _environ_cols_tput(*_): # pragma: no cover
"""cygwin xterm (windows)"""
try:
import shlex
cols = int(subprocess.check_call(shlex.split("tput cols")))
# rows = int(subprocess.check_call(shlex.split('tput lines')))
return cols
except:
pass
return None
|
def _environ_cols_tput(*args): # pragma: no cover
"""cygwin xterm (windows)"""
try:
import shlex
cols = int(subprocess.check_call(shlex.split("tput cols")))
# rows = int(subprocess.check_call(shlex.split('tput lines')))
return cols
except:
pass
return None
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def __reduce__(self):
items = [[k, self[k]] for k in self]
inst_dict = vars(self).copy()
inst_dict.pop("_keys", None)
return self.__class__, (items,), inst_dict
|
def __reduce__(self):
items = [[k, self[k]] for k in self]
inst_dict = vars(self).copy()
inst_dict.pop("_keys", None)
return (self.__class__, (items,), inst_dict)
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def status_printer(_, total=None, desc=None):
"""
Manage the printing of an IPython/Jupyter Notebook progress bar widget.
"""
# Fallback to text bar if there's no total
# DEPRECATED: replaced with an 'info' style bar
# if not total:
# return super(tqdm_notebook, tqdm_notebook).status_printer(file)
# fp = file
# Prepare IPython progress bar
if total:
pbar = IntProgress(min=0, max=total)
else: # No total? Show info style bar with no progress tqdm status
pbar = IntProgress(min=0, max=1)
pbar.value = 1
pbar.bar_style = "info"
if desc:
pbar.description = desc
# Prepare status text
ptext = HTML()
# Only way to place text to the right of the bar is to use a container
container = HBox(children=[pbar, ptext])
display(container)
def print_status(s="", close=False, bar_style=None, desc=None):
# Note: contrary to native tqdm, s='' does NOT clear bar
# goal is to keep all infos if error happens so user knows
# at which iteration the loop failed.
# Clear previous output (really necessary?)
# clear_output(wait=1)
# Get current iteration value from format_meter string
if total:
# n = None
if s:
npos = s.find(r"/|/") # cause we use bar_format=r'{n}|...'
# Check that n can be found in s (else n > total)
if npos >= 0:
n = int(s[:npos]) # get n from string
s = s[npos + 3 :] # remove from string
# Update bar with current n value
if n is not None:
pbar.value = n
# Print stats
if s: # never clear the bar (signal: s='')
s = s.replace("||", "") # remove inesthetical pipes
s = escape(s) # html escape special characters (like '?')
ptext.value = s
# Change bar style
if bar_style:
# Hack-ish way to avoid the danger bar_style being overriden by
# success because the bar gets closed after the error...
if not (pbar.bar_style == "danger" and bar_style == "success"):
pbar.bar_style = bar_style
# Special signal to close the bar
if close and pbar.bar_style != "danger": # hide only if no error
try:
container.close()
except AttributeError:
container.visible = False
# Update description
if desc:
pbar.description = desc
return print_status
|
def status_printer(_, total=None, desc=None):
"""
Manage the printing of an IPython/Jupyter Notebook progress bar widget.
"""
# Fallback to text bar if there's no total
# DEPRECATED: replaced with an 'info' style bar
# if not total:
# return super(tqdm_notebook, tqdm_notebook).status_printer(file)
# fp = file
# Prepare IPython progress bar
if total:
pbar = IntProgress(min=0, max=total)
else: # No total? Show info style bar with no progress tqdm status
pbar = IntProgress(min=0, max=1)
pbar.value = 1
pbar.bar_style = "info"
if desc:
pbar.description = desc
# Prepare status text
ptext = HTML()
# Only way to place text to the right of the bar is to use a container
container = HBox(children=[pbar, ptext])
display(container)
def print_status(s="", close=False, bar_style=None):
# Note: contrary to native tqdm, s='' does NOT clear bar
# goal is to keep all infos if error happens so user knows
# at which iteration the loop failed.
# Clear previous output (really necessary?)
# clear_output(wait=1)
# Get current iteration value from format_meter string
if total:
n = None
if s:
npos = s.find(r"/|/") # cause we use bar_format=r'{n}|...'
# Check that n can be found in s (else n > total)
if npos >= 0:
n = int(s[:npos]) # get n from string
s = s[npos + 3 :] # remove from string
# Update bar with current n value
if n is not None:
pbar.value = n
# Print stats
if s: # never clear the bar (signal: s='')
s = s.replace("||", "") # remove inesthetical pipes
s = escape(s) # html escape special characters (like '?')
ptext.value = s
# Change bar style
if bar_style:
# Hack-ish way to avoid the danger bar_style being overriden by
# success because the bar gets closed after the error...
if not (pbar.bar_style == "danger" and bar_style == "success"):
pbar.bar_style = bar_style
# Special signal to close the bar
if close and pbar.bar_style != "danger": # hide only if no error
container.visible = False
return print_status
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def print_status(s="", close=False, bar_style=None, desc=None):
# Note: contrary to native tqdm, s='' does NOT clear bar
# goal is to keep all infos if error happens so user knows
# at which iteration the loop failed.
# Clear previous output (really necessary?)
# clear_output(wait=1)
# Get current iteration value from format_meter string
if total:
# n = None
if s:
npos = s.find(r"/|/") # cause we use bar_format=r'{n}|...'
# Check that n can be found in s (else n > total)
if npos >= 0:
n = int(s[:npos]) # get n from string
s = s[npos + 3 :] # remove from string
# Update bar with current n value
if n is not None:
pbar.value = n
# Print stats
if s: # never clear the bar (signal: s='')
s = s.replace("||", "") # remove inesthetical pipes
s = escape(s) # html escape special characters (like '?')
ptext.value = s
# Change bar style
if bar_style:
# Hack-ish way to avoid the danger bar_style being overriden by
# success because the bar gets closed after the error...
if not (pbar.bar_style == "danger" and bar_style == "success"):
pbar.bar_style = bar_style
# Special signal to close the bar
if close and pbar.bar_style != "danger": # hide only if no error
try:
container.close()
except AttributeError:
container.visible = False
# Update description
if desc:
pbar.description = desc
|
def print_status(s="", close=False, bar_style=None):
# Note: contrary to native tqdm, s='' does NOT clear bar
# goal is to keep all infos if error happens so user knows
# at which iteration the loop failed.
# Clear previous output (really necessary?)
# clear_output(wait=1)
# Get current iteration value from format_meter string
if total:
n = None
if s:
npos = s.find(r"/|/") # cause we use bar_format=r'{n}|...'
# Check that n can be found in s (else n > total)
if npos >= 0:
n = int(s[:npos]) # get n from string
s = s[npos + 3 :] # remove from string
# Update bar with current n value
if n is not None:
pbar.value = n
# Print stats
if s: # never clear the bar (signal: s='')
s = s.replace("||", "") # remove inesthetical pipes
s = escape(s) # html escape special characters (like '?')
ptext.value = s
# Change bar style
if bar_style:
# Hack-ish way to avoid the danger bar_style being overriden by
# success because the bar gets closed after the error...
if not (pbar.bar_style == "danger" and bar_style == "success"):
pbar.bar_style = bar_style
# Special signal to close the bar
if close and pbar.bar_style != "danger": # hide only if no error
container.visible = False
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def cast(val, typ):
# sys.stderr.write('\ndebug | `val:type`: `' + val + ':' + typ + '`.\n')
if typ == "bool":
if (val == "True") or (val == ""):
return True
elif val == "False":
return False
else:
raise TqdmTypeError(val + " : " + typ)
try:
return eval(typ + '("' + val + '")')
except:
if typ == "chr":
return chr(ord(eval('"' + val + '"')))
else:
raise TqdmTypeError(val + " : " + typ)
|
def cast(val, typ):
log = logging.getLogger(__name__)
log.debug((val, typ))
if " or " in typ:
for t in typ.split(" or "):
try:
return cast(val, t)
except TqdmTypeError:
pass
raise TqdmTypeError(val + " : " + typ)
# sys.stderr.write('\ndebug | `val:type`: `' + val + ':' + typ + '`.\n')
if typ == "bool":
if (val == "True") or (val == ""):
return True
elif val == "False":
return False
else:
raise TqdmTypeError(val + " : " + typ)
try:
return eval(typ + '("' + val + '")')
except:
if typ == "chr":
return chr(ord(eval('"' + val + '"')))
else:
raise TqdmTypeError(val + " : " + typ)
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def posix_pipe(
fin,
fout,
delim="\n",
buf_size=256,
callback=lambda int: None, # pragma: no cover
):
"""
Params
------
fin : file with `read(buf_size : int)` method
fout : file with `write` (and optionally `flush`) methods.
callback : function(int), e.g.: `tqdm.update`
"""
fp_write = fout.write
tmp = ""
if not delim:
while True:
tmp = fin.read(buf_size)
# flush at EOF
if not tmp:
getattr(fout, "flush", lambda: None)() # pragma: no cover
return
fp_write(tmp)
callback(len(tmp))
return
buf = ""
# n = 0
while True:
tmp = fin.read(buf_size)
# flush at EOF
if not tmp:
if buf:
fp_write(buf)
callback(1 + buf.count(delim)) # n += 1 + buf.count(delim)
getattr(fout, "flush", lambda: None)() # pragma: no cover
return # n
while True:
try:
i = tmp.index(delim)
except ValueError:
buf += tmp
break
else:
fp_write(buf + tmp[: i + len(delim)])
callback(1) # n += 1
buf = ""
tmp = tmp[i + len(delim) :]
|
def posix_pipe(
fin,
fout,
delim="\n",
buf_size=256,
callback=lambda int: None, # pragma: no cover
):
"""
Params
------
fin : file with `read(buf_size : int)` method
fout : file with `write` (and optionally `flush`) methods.
callback : function(int), e.g.: `tqdm.update`
"""
fp_write = fout.write
# tmp = ''
if not delim:
while True:
tmp = fin.read(buf_size)
# flush at EOF
if not tmp:
getattr(fout, "flush", lambda: None)() # pragma: no cover
return
fp_write(tmp)
callback(len(tmp))
# return
buf = ""
# n = 0
while True:
tmp = fin.read(buf_size)
# flush at EOF
if not tmp:
if buf:
fp_write(buf)
callback(1 + buf.count(delim)) # n += 1 + buf.count(delim)
getattr(fout, "flush", lambda: None)() # pragma: no cover
return # n
while True:
try:
i = tmp.index(delim)
except ValueError:
buf += tmp
break
else:
fp_write(buf + tmp[: i + len(delim)])
callback(1) # n += 1
buf = ""
tmp = tmp[i + len(delim) :]
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def main(fp=sys.stderr):
"""
Paramters (internal use only)
---------
fp : file-like object for tqdm
"""
d = tqdm.__init__.__doc__ + CLI_EXTRA_DOC
opt_types = dict(RE_OPTS.findall(d))
for o in UNSUPPORTED_OPTS:
opt_types.pop(o)
# d = RE_OPTS.sub(r' --\1=<\1> : \2', d)
split = RE_OPTS.split(d)
opt_types_desc = zip(split[1::3], split[2::3], split[3::3])
d = "".join(
"\n --{0}=<{0}> : {1}{2}".format(*otd)
for otd in opt_types_desc
if otd[0] not in UNSUPPORTED_OPTS
)
d = (
"""Usage:
tqdm [--help | options]
Options:
-h, --help Print this help and exit
-v, --version Print version and exit
"""
+ d.strip("\n")
+ "\n"
)
# opts = docopt(d, version=__version__)
if any(v in sys.argv for v in ("-v", "--version")):
sys.stdout.write(__version__ + "\n")
sys.exit(0)
elif any(v in sys.argv for v in ("-h", "--help")):
sys.stdout.write(d + "\n")
sys.exit(0)
argv = RE_SHLEX.split(" ".join(sys.argv))
opts = dict(zip(argv[1::2], argv[2::2]))
tqdm_args = {"file": fp}
try:
for o, v in opts.items():
try:
tqdm_args[o] = cast(v, opt_types[o])
except KeyError as e:
raise TqdmKeyError(str(e))
# fp.write('\ndebug | args: ' + str(tqdm_args) + '\n')
except:
fp.write("\nError:\nUsage:\n tqdm [--help | options]\n")
for i in sys.stdin:
sys.stdout.write(i)
raise
else:
buf_size = tqdm_args.pop("buf_size", 256)
delim = tqdm_args.pop("delim", "\n")
delim_per_char = tqdm_args.pop("bytes", False)
if delim_per_char:
with tqdm(**tqdm_args) as t:
posix_pipe(sys.stdin, sys.stdout, "", buf_size, t.update)
elif delim == "\n":
for i in tqdm(sys.stdin, **tqdm_args):
sys.stdout.write(i)
else:
with tqdm(**tqdm_args) as t:
posix_pipe(sys.stdin, sys.stdout, delim, buf_size, t.update)
|
def main(fp=sys.stderr):
"""
Paramters (internal use only)
---------
fp : file-like object for tqdm
"""
try:
log = sys.argv.index("--log")
except ValueError:
logLevel = "INFO"
else:
# sys.argv.pop(log)
# logLevel = sys.argv.pop(log)
logLevel = sys.argv[log + 1]
logging.basicConfig(
level=getattr(logging, logLevel),
format="%(levelname)s:%(module)s:%(lineno)d:%(message)s",
)
log = logging.getLogger(__name__)
d = tqdm.__init__.__doc__ + CLI_EXTRA_DOC
opt_types = dict(RE_OPTS.findall(d))
# opt_types['delim'] = 'chr'
for o in UNSUPPORTED_OPTS:
opt_types.pop(o)
log.debug(sorted(opt_types.items()))
# d = RE_OPTS.sub(r' --\1=<\1> : \2', d)
split = RE_OPTS.split(d)
opt_types_desc = zip(split[1::3], split[2::3], split[3::3])
d = "".join(
"\n --{0}=<{0}> : {1}{2}".format(*otd)
for otd in opt_types_desc
if otd[0] not in UNSUPPORTED_OPTS
)
d = (
"""Usage:
tqdm [--help | options]
Options:
-h, --help Print this help and exit
-v, --version Print version and exit
"""
+ d.strip("\n")
+ "\n"
)
# opts = docopt(d, version=__version__)
if any(v in sys.argv for v in ("-v", "--version")):
sys.stdout.write(__version__ + "\n")
sys.exit(0)
elif any(v in sys.argv for v in ("-h", "--help")):
sys.stdout.write(d + "\n")
sys.exit(0)
argv = RE_SHLEX.split(" ".join(["tqdm"] + sys.argv[1:]))
opts = dict(zip(argv[1::2], argv[2::2]))
log.debug(opts)
opts.pop("log", True)
tqdm_args = {"file": fp}
try:
for o, v in opts.items():
try:
tqdm_args[o] = cast(v, opt_types[o])
except KeyError as e:
raise TqdmKeyError(str(e))
log.debug("args:" + str(tqdm_args))
except:
fp.write("\nError:\nUsage:\n tqdm [--help | options]\n")
for i in sys.stdin:
sys.stdout.write(i)
raise
else:
buf_size = tqdm_args.pop("buf_size", 256)
delim = tqdm_args.pop("delim", "\n")
delim_per_char = tqdm_args.pop("bytes", False)
if delim_per_char:
tqdm_args.setdefault("unit", "B")
tqdm_args.setdefault("unit_scale", True)
tqdm_args.setdefault("unit_divisor", 1024)
log.debug(tqdm_args)
with tqdm(**tqdm_args) as t:
posix_pipe(sys.stdin, sys.stdout, "", buf_size, t.update)
elif delim == "\n":
log.debug(tqdm_args)
for i in tqdm(sys.stdin, **tqdm_args):
sys.stdout.write(i)
else:
log.debug(tqdm_args)
with tqdm(**tqdm_args) as t:
posix_pipe(sys.stdin, sys.stdout, delim, buf_size, t.update)
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def format_sizeof(num, suffix="", divisor=1000):
"""
Formats a number (greater than unity) with SI Order of Magnitude
prefixes.
Parameters
----------
num : float
Number ( >= 1) to format.
suffix : str, optional
Post-postfix [default: ''].
divisor : float, optionl
Divisor between prefixes [default: 1000].
Returns
-------
out : str
Number with Order of Magnitude SI unit postfix.
"""
for unit in ["", "K", "M", "G", "T", "P", "E", "Z"]:
if abs(num) < 999.95:
if abs(num) < 99.95:
if abs(num) < 9.995:
return "{0:1.2f}".format(num) + unit + suffix
return "{0:2.1f}".format(num) + unit + suffix
return "{0:3.0f}".format(num) + unit + suffix
num /= divisor
return "{0:3.1f}Y".format(num) + suffix
|
def format_sizeof(num, suffix="", divisor=1000):
"""
Formats a number (greater than unity) with SI Order of Magnitude
prefixes.
Parameters
----------
num : float
Number ( >= 1) to format.
suffix : str, optional
Post-postfix [default: ''].
divisor : float, optionl
Divisor between prefixes [default: 1000].
Returns
-------
out : str
Number with Order of Magnitude SI unit postfix.
"""
for unit in ["", "k", "M", "G", "T", "P", "E", "Z"]:
if abs(num) < 999.95:
if abs(num) < 99.95:
if abs(num) < 9.995:
return "{0:1.2f}".format(num) + unit + suffix
return "{0:2.1f}".format(num) + unit + suffix
return "{0:3.0f}".format(num) + unit + suffix
num /= divisor
return "{0:3.1f}Y".format(num) + suffix
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def format_meter(
n,
total,
elapsed,
ncols=None,
prefix="",
ascii=False,
unit="it",
unit_scale=False,
rate=None,
bar_format=None,
postfix=None,
unit_divisor=1000,
):
"""
Return a string-based progress bar given some parameters
Parameters
----------
n : int
Number of finished iterations.
total : int
The expected total number of iterations. If meaningless (), only
basic progress statistics are displayed (no ETA).
elapsed : float
Number of seconds passed since start.
ncols : int, optional
The width of the entire output message. If specified,
dynamically resizes the progress meter to stay within this bound
[default: None]. The fallback meter width is 10 for the progress
bar + no limit for the iterations counter and statistics. If 0,
will not print any meter (only stats).
prefix : str, optional
Prefix message (included in total width) [default: ''].
ascii : bool, optional
If not set, use unicode (smooth blocks) to fill the meter
[default: False]. The fallback is to use ASCII characters
(1-9 #).
unit : str, optional
The iteration unit [default: 'it'].
unit_scale : bool, optional
If set, the number of iterations will printed with an
appropriate SI metric prefix (K = 10^3, M = 10^6, etc.)
[default: False].
rate : float, optional
Manual override for iteration rate.
If [default: None], uses n/elapsed.
bar_format : str, optional
Specify a custom bar string formatting. May impact performance.
[default: '{l_bar}{bar}{r_bar}'], where l_bar is
'{desc}{percentage:3.0f}%|' and r_bar is
'| {n_fmt}/{total_fmt} [{elapsed}<{remaining}, {rate_fmt}]'
Possible vars: bar, n, n_fmt, total, total_fmt, percentage,
rate, rate_fmt, elapsed, remaining, l_bar, r_bar, desc.
postfix : str, optional
Same as prefix but will be placed at the end as additional stats.
unit_divisor : float, optional
[default: 1000], ignored unless `unit_scale` is True.
Returns
-------
out : Formatted meter and stats, ready to display.
"""
# sanity check: total
if total and n > total:
total = None
format_interval = tqdm.format_interval
elapsed_str = format_interval(elapsed)
# if unspecified, attempt to use rate = average speed
# (we allow manual override since predicting time is an arcane art)
if rate is None and elapsed:
rate = n / elapsed
inv_rate = 1 / rate if (rate and (rate < 1)) else None
format_sizeof = tqdm.format_sizeof
rate_fmt = (
(
(
format_sizeof(inv_rate if inv_rate else rate)
if unit_scale
else "{0:5.2f}".format(inv_rate if inv_rate else rate)
)
if rate
else "?"
)
+ ("s" if inv_rate else unit)
+ "/"
+ (unit if inv_rate else "s")
)
if unit_scale:
n_fmt = format_sizeof(n, divisor=unit_divisor)
total_fmt = format_sizeof(total, divisor=unit_divisor) if total else None
else:
n_fmt = str(n)
total_fmt = str(total)
# total is known: we can predict some stats
if total:
# fractional and percentage progress
frac = n / total
percentage = frac * 100
remaining_str = format_interval((total - n) / rate) if rate else "?"
# format the stats displayed to the left and right sides of the bar
l_bar = (prefix if prefix else "") + "{0:3.0f}%|".format(percentage)
r_bar = "| {0}/{1} [{2}<{3}, {4}{5}]".format(
n_fmt,
total_fmt,
elapsed_str,
remaining_str,
rate_fmt,
", " + postfix if postfix else "",
)
if ncols == 0:
return l_bar[:-1] + r_bar[1:]
if bar_format:
# Custom bar formatting
# Populate a dict with all available progress indicators
bar_args = {
"n": n,
"n_fmt": n_fmt,
"total": total,
"total_fmt": total_fmt,
"percentage": percentage,
"rate": rate if inv_rate is None else inv_rate,
"rate_noinv": rate,
"rate_noinv_fmt": (
(format_sizeof(rate) if unit_scale else "{0:5.2f}".format(rate))
if rate
else "?"
)
+ unit
+ "/s",
"rate_fmt": rate_fmt,
"elapsed": elapsed_str,
"remaining": remaining_str,
"l_bar": l_bar,
"r_bar": r_bar,
"desc": prefix if prefix else "",
"postfix": ", " + postfix if postfix else "",
# 'bar': full_bar # replaced by procedure below
}
# Interpolate supplied bar format with the dict
if "{bar}" in bar_format:
# Format left/right sides of the bar, and format the bar
# later in the remaining space (avoid breaking display)
l_bar_user, r_bar_user = bar_format.split("{bar}")
l_bar = l_bar_user.format(**bar_args)
r_bar = r_bar_user.format(**bar_args)
else:
# Else no progress bar, we can just format and return
return bar_format.format(**bar_args)
# Formatting progress bar
# space available for bar's display
N_BARS = max(1, ncols - len(l_bar) - len(r_bar)) if ncols else 10
# format bar depending on availability of unicode/ascii chars
if ascii:
bar_length, frac_bar_length = divmod(int(frac * N_BARS * 10), 10)
bar = "#" * bar_length
frac_bar = chr(48 + frac_bar_length) if frac_bar_length else " "
else:
bar_length, frac_bar_length = divmod(int(frac * N_BARS * 8), 8)
bar = _unich(0x2588) * bar_length
frac_bar = _unich(0x2590 - frac_bar_length) if frac_bar_length else " "
# whitespace padding
if bar_length < N_BARS:
full_bar = bar + frac_bar + " " * max(N_BARS - bar_length - 1, 0)
else:
full_bar = bar + " " * max(N_BARS - bar_length, 0)
# Piece together the bar parts
return l_bar + full_bar + r_bar
# no total: no progressbar, ETA, just progress stats
else:
return (prefix if prefix else "") + "{0}{1} [{2}, {3}{4}]".format(
n_fmt, unit, elapsed_str, rate_fmt, ", " + postfix if postfix else ""
)
|
def format_meter(
n,
total,
elapsed,
ncols=None,
prefix="",
ascii=False,
unit="it",
unit_scale=False,
rate=None,
bar_format=None,
postfix=None,
unit_divisor=1000,
):
"""
Return a string-based progress bar given some parameters
Parameters
----------
n : int
Number of finished iterations.
total : int
The expected total number of iterations. If meaningless (), only
basic progress statistics are displayed (no ETA).
elapsed : float
Number of seconds passed since start.
ncols : int, optional
The width of the entire output message. If specified,
dynamically resizes the progress meter to stay within this bound
[default: None]. The fallback meter width is 10 for the progress
bar + no limit for the iterations counter and statistics. If 0,
will not print any meter (only stats).
prefix : str, optional
Prefix message (included in total width) [default: ''].
Use as {desc} in bar_format string.
ascii : bool, optional
If not set, use unicode (smooth blocks) to fill the meter
[default: False]. The fallback is to use ASCII characters
(1-9 #).
unit : str, optional
The iteration unit [default: 'it'].
unit_scale : bool or int or float, optional
If 1 or True, the number of iterations will be printed with an
appropriate SI metric prefix (k = 10^3, M = 10^6, etc.)
[default: False]. If any other non-zero number, will scale
`total` and `n`.
rate : float, optional
Manual override for iteration rate.
If [default: None], uses n/elapsed.
bar_format : str, optional
Specify a custom bar string formatting. May impact performance.
[default: '{l_bar}{bar}{r_bar}'], where
l_bar='{desc}: {percentage:3.0f}%|' and
r_bar='| {n_fmt}/{total_fmt} [{elapsed}<{remaining}, '
'{rate_fmt}{postfix}]'
Possible vars: l_bar, bar, r_bar, n, n_fmt, total, total_fmt,
percentage, rate, rate_fmt, rate_noinv, rate_noinv_fmt,
rate_inv, rate_inv_fmt, elapsed, remaining, desc, postfix.
Note that a trailing ": " is automatically removed after {desc}
if the latter is empty.
postfix : *, optional
Similar to `prefix`, but placed at the end
(e.g. for additional stats).
Note: postfix is usually a string (not a dict) for this method,
and will if possible be set to postfix = ', ' + postfix.
However other types are supported (#382).
unit_divisor : float, optional
[default: 1000], ignored unless `unit_scale` is True.
Returns
-------
out : Formatted meter and stats, ready to display.
"""
# sanity check: total
if total and n > total:
total = None
# apply custom scale if necessary
if unit_scale and unit_scale not in (True, 1):
total *= unit_scale
n *= unit_scale
unit_scale = False
format_interval = tqdm.format_interval
elapsed_str = format_interval(elapsed)
# if unspecified, attempt to use rate = average speed
# (we allow manual override since predicting time is an arcane art)
if rate is None and elapsed:
rate = n / elapsed
inv_rate = 1 / rate if rate else None
format_sizeof = tqdm.format_sizeof
rate_noinv_fmt = (
(
(format_sizeof(rate) if unit_scale else "{0:5.2f}".format(rate))
if rate
else "?"
)
+ unit
+ "/s"
)
rate_inv_fmt = (
(
(format_sizeof(inv_rate) if unit_scale else "{0:5.2f}".format(inv_rate))
if inv_rate
else "?"
)
+ "s/"
+ unit
)
rate_fmt = rate_inv_fmt if inv_rate and inv_rate > 1 else rate_noinv_fmt
if unit_scale:
n_fmt = format_sizeof(n, divisor=unit_divisor)
total_fmt = format_sizeof(total, divisor=unit_divisor) if total else None
else:
n_fmt = str(n)
total_fmt = str(total)
try:
postfix = ", " + postfix if postfix else ""
except TypeError:
pass
# total is known: we can predict some stats
if total:
# fractional and percentage progress
frac = n / total
percentage = frac * 100
remaining_str = format_interval((total - n) / rate) if rate else "?"
# format the stats displayed to the left and right sides of the bar
if prefix:
# old prefix setup work around
bool_prefix_colon_already = prefix[-2:] == ": "
l_bar = prefix if bool_prefix_colon_already else prefix + ": "
else:
l_bar = ""
l_bar += "{0:3.0f}%|".format(percentage)
r_bar = "| {0}/{1} [{2}<{3}, {4}{5}]".format(
n_fmt, total_fmt, elapsed_str, remaining_str, rate_fmt, postfix
)
if ncols == 0:
return l_bar[:-1] + r_bar[1:]
if bar_format:
# Custom bar formatting
# Populate a dict with all available progress indicators
bar_args = {
"n": n,
"n_fmt": n_fmt,
"total": total,
"total_fmt": total_fmt,
"percentage": percentage,
"rate": inv_rate if inv_rate and inv_rate > 1 else rate,
"rate_fmt": rate_fmt,
"rate_noinv": rate,
"rate_noinv_fmt": rate_noinv_fmt,
"rate_inv": inv_rate,
"rate_inv_fmt": rate_inv_fmt,
"elapsed": elapsed_str,
"remaining": remaining_str,
"l_bar": l_bar,
"r_bar": r_bar,
"desc": prefix or "",
"postfix": postfix,
# 'bar': full_bar # replaced by procedure below
}
# auto-remove colon for empty `desc`
if not prefix:
bar_format = bar_format.replace("{desc}: ", "")
# Interpolate supplied bar format with the dict
if "{bar}" in bar_format:
# Format left/right sides of the bar, and format the bar
# later in the remaining space (avoid breaking display)
l_bar_user, r_bar_user = bar_format.split("{bar}")
l_bar = l_bar_user.format(**bar_args)
r_bar = r_bar_user.format(**bar_args)
else:
# Else no progress bar, we can just format and return
return bar_format.format(**bar_args)
# Formatting progress bar
# space available for bar's display
N_BARS = max(1, ncols - len(l_bar) - len(r_bar)) if ncols else 10
# format bar depending on availability of unicode/ascii chars
if ascii:
bar_length, frac_bar_length = divmod(int(frac * N_BARS * 10), 10)
bar = "#" * bar_length
frac_bar = chr(48 + frac_bar_length) if frac_bar_length else " "
else:
bar_length, frac_bar_length = divmod(int(frac * N_BARS * 8), 8)
bar = _unich(0x2588) * bar_length
frac_bar = _unich(0x2590 - frac_bar_length) if frac_bar_length else " "
# whitespace padding
if bar_length < N_BARS:
full_bar = bar + frac_bar + " " * max(N_BARS - bar_length - 1, 0)
else:
full_bar = bar + " " * max(N_BARS - bar_length, 0)
# Piece together the bar parts
return l_bar + full_bar + r_bar
# no total: no progressbar, ETA, just progress stats
else:
return ((prefix + ": ") if prefix else "") + "{0}{1} [{2}, {3}{4}]".format(
n_fmt, unit, elapsed_str, rate_fmt, postfix
)
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def __new__(cls, *args, **kwargs):
# Create a new instance
instance = object.__new__(cls)
# Add to the list of instances
if "_instances" not in cls.__dict__:
cls._instances = WeakSet()
cls._instances.add(instance)
# Create the monitoring thread
if cls.monitor_interval and (cls.monitor is None or not cls.monitor.report()):
cls.monitor = TMonitor(cls, cls.monitor_interval)
# Return the instance
return instance
|
def __new__(cls, *args, **kwargs):
# Create a new instance
instance = object.__new__(cls)
# Add to the list of instances
if "_instances" not in cls.__dict__:
cls._instances = WeakSet()
if "_lock" not in cls.__dict__:
cls._lock = TqdmDefaultWriteLock()
with cls._lock:
cls._instances.add(instance)
# Create the monitoring thread
if cls.monitor_interval and (cls.monitor is None or not cls.monitor.report()):
try:
cls.monitor = TMonitor(cls, cls.monitor_interval)
except Exception as e: # pragma: nocover
warn(
"tqdm:disabling monitor support"
" (monitor_interval = 0) due to:\n" + str(e),
TqdmMonitorWarning,
)
cls.monitor_interval = 0
# Return the instance
return instance
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def _get_free_pos(cls, instance=None):
"""Skips specified instance"""
try:
return max(inst.pos for inst in cls._instances if inst is not instance) + 1
except ValueError as e:
if "arg is an empty sequence" in str(e):
return 0
raise # pragma: no cover
|
def _get_free_pos(cls, instance=None):
"""Skips specified instance"""
positions = set(abs(inst.pos) for inst in cls._instances if inst is not instance)
return min(set(range(len(positions) + 1)).difference(positions))
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def _decr_instances(cls, instance):
"""
Remove from list and reposition other bars
so that newer bars won't overlap previous bars
"""
try: # in case instance was explicitly positioned, it won't be in set
cls._instances.remove(instance)
for inst in cls._instances:
if inst.pos > instance.pos:
inst.pos -= 1
# Kill monitor if no instances are left
if not cls._instances and cls.monitor:
cls.monitor.exit()
try:
del cls.monitor
except AttributeError:
pass
cls.monitor = None
except KeyError:
pass
|
def _decr_instances(cls, instance):
"""
Remove from list and reposition other bars
so that newer bars won't overlap previous bars
"""
with cls._lock:
try:
cls._instances.remove(instance)
except KeyError:
if not instance.gui: # pragma: no cover
raise
else:
for inst in cls._instances:
# negative `pos` means fixed
if inst.pos > abs(instance.pos):
inst.pos -= 1
# TODO: check this doesn't overwrite another fixed bar
# Kill monitor if no instances are left
if not cls._instances and cls.monitor:
try:
cls.monitor.exit()
del cls.monitor
except AttributeError: # pragma: nocover
pass
else:
cls.monitor = None
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def write(cls, s, file=None, end="\n"):
"""
Print a message via tqdm (without overlap with bars)
"""
fp = file if file is not None else sys.stdout
# Clear all bars
inst_cleared = []
for inst in getattr(cls, "_instances", []):
# Clear instance if in the target output file
# or if write output + tqdm output are both either
# sys.stdout or sys.stderr (because both are mixed in terminal)
if inst.fp == fp or all(f in (sys.stdout, sys.stderr) for f in (fp, inst.fp)):
inst.clear()
inst_cleared.append(inst)
# Write the message
fp.write(s)
fp.write(end)
# Force refresh display of bars we cleared
for inst in inst_cleared:
# Avoid race conditions by checking that the instance started
if hasattr(inst, "start_t"): # pragma: nocover
inst.refresh()
|
def write(cls, s, file=None, end="\n", nolock=False):
"""
Print a message via tqdm (without overlap with bars)
"""
fp = file if file is not None else sys.stdout
with cls.external_write_mode(file=file, nolock=nolock):
# Write the message
fp.write(s)
fp.write(end)
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def pandas(tclass, *targs, **tkwargs):
"""
Registers the given `tqdm` class with
pandas.core.
( frame.DataFrame
| series.Series
| groupby.DataFrameGroupBy
| groupby.SeriesGroupBy
).progress_apply
A new instance will be create every time `progress_apply` is called,
and each instance will automatically close() upon completion.
Parameters
----------
targs, tkwargs : arguments for the tqdm instance
Examples
--------
>>> import pandas as pd
>>> import numpy as np
>>> from tqdm import tqdm, tqdm_gui
>>>
>>> df = pd.DataFrame(np.random.randint(0, 100, (100000, 6)))
>>> tqdm.pandas(ncols=50) # can use tqdm_gui, optional kwargs, etc
>>> # Now you can use `progress_apply` instead of `apply`
>>> df.groupby(0).progress_apply(lambda x: x**2)
References
----------
https://stackoverflow.com/questions/18603270/
progress-indicator-during-pandas-operations-python
"""
from pandas.core.frame import DataFrame
from pandas.core.series import Series
from pandas.core.groupby import DataFrameGroupBy
from pandas.core.groupby import SeriesGroupBy
from pandas.core.groupby import GroupBy
from pandas.core.groupby import PanelGroupBy
from pandas import Panel
deprecated_t = [tkwargs.pop("deprecated_t", None)]
def inner_generator(df_function="apply"):
def inner(df, func, *args, **kwargs):
"""
Parameters
----------
df : (DataFrame|Series)[GroupBy]
Data (may be grouped).
func : function
To be applied on the (grouped) data.
*args, *kwargs : optional
Transmitted to `df.apply()`.
"""
# Precompute total iterations
total = getattr(df, "ngroups", None)
if total is None: # not grouped
total = len(df) if isinstance(df, Series) else df.size // len(df)
else:
total += 1 # pandas calls update once too many
# Init bar
if deprecated_t[0] is not None:
t = deprecated_t[0]
deprecated_t[0] = None
else:
t = tclass(*targs, total=total, **tkwargs)
# Define bar updating wrapper
def wrapper(*args, **kwargs):
t.update()
return func(*args, **kwargs)
# Apply the provided function (in *args and **kwargs)
# on the df using our wrapper (which provides bar updating)
result = getattr(df, df_function)(wrapper, *args, **kwargs)
# Close bar and return pandas calculation result
t.close()
return result
return inner
# Monkeypatch pandas to provide easy methods
# Enable custom tqdm progress in pandas!
Series.progress_apply = inner_generator()
SeriesGroupBy.progress_apply = inner_generator()
Series.progress_map = inner_generator("map")
SeriesGroupBy.progress_map = inner_generator("map")
DataFrame.progress_apply = inner_generator()
DataFrameGroupBy.progress_apply = inner_generator()
DataFrame.progress_applymap = inner_generator("applymap")
Panel.progress_apply = inner_generator()
PanelGroupBy.progress_apply = inner_generator()
GroupBy.progress_apply = inner_generator()
GroupBy.progress_aggregate = inner_generator("aggregate")
GroupBy.progress_transform = inner_generator("transform")
|
def pandas(tclass, *targs, **tkwargs):
"""
Registers the given `tqdm` class with
pandas.core.
( frame.DataFrame
| series.Series
| groupby.DataFrameGroupBy
| groupby.SeriesGroupBy
).progress_apply
A new instance will be create every time `progress_apply` is called,
and each instance will automatically close() upon completion.
Parameters
----------
targs, tkwargs : arguments for the tqdm instance
Examples
--------
>>> import pandas as pd
>>> import numpy as np
>>> from tqdm import tqdm, tqdm_gui
>>>
>>> df = pd.DataFrame(np.random.randint(0, 100, (100000, 6)))
>>> tqdm.pandas(ncols=50) # can use tqdm_gui, optional kwargs, etc
>>> # Now you can use `progress_apply` instead of `apply`
>>> df.groupby(0).progress_apply(lambda x: x**2)
References
----------
https://stackoverflow.com/questions/18603270/
progress-indicator-during-pandas-operations-python
"""
from pandas.core.frame import DataFrame
from pandas.core.series import Series
from pandas.core.groupby import DataFrameGroupBy
from pandas.core.groupby import SeriesGroupBy
from pandas.core.groupby import GroupBy
from pandas.core.groupby import PanelGroupBy
from pandas import Panel
deprecated_t = [tkwargs.pop("deprecated_t", None)]
def inner_generator(df_function="apply"):
def inner(df, func, *args, **kwargs):
"""
Parameters
----------
df : (DataFrame|Series)[GroupBy]
Data (may be grouped).
func : function
To be applied on the (grouped) data.
**kwargs : optional
Transmitted to `df.apply()`.
"""
# Precompute total iterations
total = getattr(df, "ngroups", None)
if total is None: # not grouped
if df_function == "applymap":
total = df.size
elif isinstance(df, Series):
total = len(df)
else: # DataFrame or Panel
axis = kwargs.get("axis", 0)
# when axis=0, total is shape[axis1]
total = df.size // df.shape[axis]
# Init bar
if deprecated_t[0] is not None:
t = deprecated_t[0]
deprecated_t[0] = None
else:
t = tclass(*targs, total=total, **tkwargs)
if len(args) > 0:
# *args intentionally not supported (see #244, #299)
TqdmDeprecationWarning(
"Except func, normal arguments are intentionally"
+ " not supported by"
+ " `(DataFrame|Series|GroupBy).progress_apply`."
+ " Use keyword arguments instead.",
fp_write=getattr(t.fp, "write", sys.stderr.write),
)
# Define bar updating wrapper
def wrapper(*args, **kwargs):
# update tbar correctly
# it seems `pandas apply` calls `func` twice
# on the first column/row to decide whether it can
# take a fast or slow code path; so stop when t.total==t.n
t.update(n=1 if t.total and t.n < t.total else 0)
return func(*args, **kwargs)
# Apply the provided function (in **kwargs)
# on the df using our wrapper (which provides bar updating)
result = getattr(df, df_function)(wrapper, **kwargs)
# Close bar and return pandas calculation result
t.close()
return result
return inner
# Monkeypatch pandas to provide easy methods
# Enable custom tqdm progress in pandas!
Series.progress_apply = inner_generator()
SeriesGroupBy.progress_apply = inner_generator()
Series.progress_map = inner_generator("map")
SeriesGroupBy.progress_map = inner_generator("map")
DataFrame.progress_apply = inner_generator()
DataFrameGroupBy.progress_apply = inner_generator()
DataFrame.progress_applymap = inner_generator("applymap")
Panel.progress_apply = inner_generator()
PanelGroupBy.progress_apply = inner_generator()
GroupBy.progress_apply = inner_generator()
GroupBy.progress_aggregate = inner_generator("aggregate")
GroupBy.progress_transform = inner_generator("transform")
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def inner_generator(df_function="apply"):
def inner(df, func, *args, **kwargs):
"""
Parameters
----------
df : (DataFrame|Series)[GroupBy]
Data (may be grouped).
func : function
To be applied on the (grouped) data.
*args, *kwargs : optional
Transmitted to `df.apply()`.
"""
# Precompute total iterations
total = getattr(df, "ngroups", None)
if total is None: # not grouped
total = len(df) if isinstance(df, Series) else df.size // len(df)
else:
total += 1 # pandas calls update once too many
# Init bar
if deprecated_t[0] is not None:
t = deprecated_t[0]
deprecated_t[0] = None
else:
t = tclass(*targs, total=total, **tkwargs)
# Define bar updating wrapper
def wrapper(*args, **kwargs):
t.update()
return func(*args, **kwargs)
# Apply the provided function (in *args and **kwargs)
# on the df using our wrapper (which provides bar updating)
result = getattr(df, df_function)(wrapper, *args, **kwargs)
# Close bar and return pandas calculation result
t.close()
return result
return inner
|
def inner_generator(df_function="apply"):
def inner(df, func, *args, **kwargs):
"""
Parameters
----------
df : (DataFrame|Series)[GroupBy]
Data (may be grouped).
func : function
To be applied on the (grouped) data.
**kwargs : optional
Transmitted to `df.apply()`.
"""
# Precompute total iterations
total = getattr(df, "ngroups", None)
if total is None: # not grouped
if df_function == "applymap":
total = df.size
elif isinstance(df, Series):
total = len(df)
else: # DataFrame or Panel
axis = kwargs.get("axis", 0)
# when axis=0, total is shape[axis1]
total = df.size // df.shape[axis]
# Init bar
if deprecated_t[0] is not None:
t = deprecated_t[0]
deprecated_t[0] = None
else:
t = tclass(*targs, total=total, **tkwargs)
if len(args) > 0:
# *args intentionally not supported (see #244, #299)
TqdmDeprecationWarning(
"Except func, normal arguments are intentionally"
+ " not supported by"
+ " `(DataFrame|Series|GroupBy).progress_apply`."
+ " Use keyword arguments instead.",
fp_write=getattr(t.fp, "write", sys.stderr.write),
)
# Define bar updating wrapper
def wrapper(*args, **kwargs):
# update tbar correctly
# it seems `pandas apply` calls `func` twice
# on the first column/row to decide whether it can
# take a fast or slow code path; so stop when t.total==t.n
t.update(n=1 if t.total and t.n < t.total else 0)
return func(*args, **kwargs)
# Apply the provided function (in **kwargs)
# on the df using our wrapper (which provides bar updating)
result = getattr(df, df_function)(wrapper, **kwargs)
# Close bar and return pandas calculation result
t.close()
return result
return inner
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def inner(df, func, *args, **kwargs):
"""
Parameters
----------
df : (DataFrame|Series)[GroupBy]
Data (may be grouped).
func : function
To be applied on the (grouped) data.
*args, *kwargs : optional
Transmitted to `df.apply()`.
"""
# Precompute total iterations
total = getattr(df, "ngroups", None)
if total is None: # not grouped
total = len(df) if isinstance(df, Series) else df.size // len(df)
else:
total += 1 # pandas calls update once too many
# Init bar
if deprecated_t[0] is not None:
t = deprecated_t[0]
deprecated_t[0] = None
else:
t = tclass(*targs, total=total, **tkwargs)
# Define bar updating wrapper
def wrapper(*args, **kwargs):
t.update()
return func(*args, **kwargs)
# Apply the provided function (in *args and **kwargs)
# on the df using our wrapper (which provides bar updating)
result = getattr(df, df_function)(wrapper, *args, **kwargs)
# Close bar and return pandas calculation result
t.close()
return result
|
def inner(df, func, *args, **kwargs):
"""
Parameters
----------
df : (DataFrame|Series)[GroupBy]
Data (may be grouped).
func : function
To be applied on the (grouped) data.
**kwargs : optional
Transmitted to `df.apply()`.
"""
# Precompute total iterations
total = getattr(df, "ngroups", None)
if total is None: # not grouped
if df_function == "applymap":
total = df.size
elif isinstance(df, Series):
total = len(df)
else: # DataFrame or Panel
axis = kwargs.get("axis", 0)
# when axis=0, total is shape[axis1]
total = df.size // df.shape[axis]
# Init bar
if deprecated_t[0] is not None:
t = deprecated_t[0]
deprecated_t[0] = None
else:
t = tclass(*targs, total=total, **tkwargs)
if len(args) > 0:
# *args intentionally not supported (see #244, #299)
TqdmDeprecationWarning(
"Except func, normal arguments are intentionally"
+ " not supported by"
+ " `(DataFrame|Series|GroupBy).progress_apply`."
+ " Use keyword arguments instead.",
fp_write=getattr(t.fp, "write", sys.stderr.write),
)
# Define bar updating wrapper
def wrapper(*args, **kwargs):
# update tbar correctly
# it seems `pandas apply` calls `func` twice
# on the first column/row to decide whether it can
# take a fast or slow code path; so stop when t.total==t.n
t.update(n=1 if t.total and t.n < t.total else 0)
return func(*args, **kwargs)
# Apply the provided function (in **kwargs)
# on the df using our wrapper (which provides bar updating)
result = getattr(df, df_function)(wrapper, **kwargs)
# Close bar and return pandas calculation result
t.close()
return result
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def wrapper(*args, **kwargs):
t.update()
return func(*args, **kwargs)
|
def wrapper(*args, **kwargs):
# update tbar correctly
# it seems `pandas apply` calls `func` twice
# on the first column/row to decide whether it can
# take a fast or slow code path; so stop when t.total==t.n
t.update(n=1 if t.total and t.n < t.total else 0)
return func(*args, **kwargs)
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def __init__(
self,
iterable=None,
desc=None,
total=None,
leave=True,
file=None,
ncols=None,
mininterval=0.1,
maxinterval=10.0,
miniters=None,
ascii=None,
disable=False,
unit="it",
unit_scale=False,
dynamic_ncols=False,
smoothing=0.3,
bar_format=None,
initial=0,
position=None,
postfix=None,
unit_divisor=1000,
gui=False,
**kwargs,
):
"""
Parameters
----------
iterable : iterable, optional
Iterable to decorate with a progressbar.
Leave blank to manually manage the updates.
desc : str, optional
Prefix for the progressbar.
total : int, optional
The number of expected iterations. If unspecified,
len(iterable) is used if possible. As a last resort, only basic
progress statistics are displayed (no ETA, no progressbar).
If `gui` is True and this parameter needs subsequent updating,
specify an initial arbitrary large positive integer,
e.g. int(9e9).
leave : bool, optional
If [default: True], keeps all traces of the progressbar
upon termination of iteration.
file : `io.TextIOWrapper` or `io.StringIO`, optional
Specifies where to output the progress messages
(default: sys.stderr). Uses `file.write(str)` and `file.flush()`
methods.
ncols : int, optional
The width of the entire output message. If specified,
dynamically resizes the progressbar to stay within this bound.
If unspecified, attempts to use environment width. The
fallback is a meter width of 10 and no limit for the counter and
statistics. If 0, will not print any meter (only stats).
mininterval : float, optional
Minimum progress display update interval, in seconds [default: 0.1].
maxinterval : float, optional
Maximum progress display update interval, in seconds [default: 10].
Automatically adjusts `miniters` to correspond to `mininterval`
after long display update lag. Only works if `dynamic_miniters`
or monitor thread is enabled.
miniters : int, optional
Minimum progress display update interval, in iterations.
If 0 and `dynamic_miniters`, will automatically adjust to equal
`mininterval` (more CPU efficient, good for tight loops).
If > 0, will skip display of specified number of iterations.
Tweak this and `mininterval` to get very efficient loops.
If your progress is erratic with both fast and slow iterations
(network, skipping items, etc) you should set miniters=1.
ascii : bool, optional
If unspecified or False, use unicode (smooth blocks) to fill
the meter. The fallback is to use ASCII characters `1-9 #`.
disable : bool, optional
Whether to disable the entire progressbar wrapper
[default: False]. If set to None, disable on non-TTY.
unit : str, optional
String that will be used to define the unit of each iteration
[default: it].
unit_scale : bool, optional
If set, the number of iterations will be reduced/scaled
automatically and a metric prefix following the
International System of Units standard will be added
(kilo, mega, etc.) [default: False].
dynamic_ncols : bool, optional
If set, constantly alters `ncols` to the environment (allowing
for window resizes) [default: False].
smoothing : float, optional
Exponential moving average smoothing factor for speed estimates
(ignored in GUI mode). Ranges from 0 (average speed) to 1
(current/instantaneous speed) [default: 0.3].
bar_format : str, optional
Specify a custom bar string formatting. May impact performance.
If unspecified, will use '{l_bar}{bar}{r_bar}', where l_bar is
'{desc}{percentage:3.0f}%|' and r_bar is
'| {n_fmt}/{total_fmt} [{elapsed}<{remaining}, {rate_fmt}]'
Possible vars: bar, n, n_fmt, total, total_fmt, percentage,
rate, rate_fmt, elapsed, remaining, l_bar, r_bar, desc.
initial : int, optional
The initial counter value. Useful when restarting a progress
bar [default: 0].
position : int, optional
Specify the line offset to print this bar (starting from 0)
Automatic if unspecified.
Useful to manage multiple bars at once (eg, from threads).
postfix : dict, optional
Specify additional stats to display at the end of the bar.
unit_divisor : float, optional
[default: 1000], ignored unless `unit_scale` is True.
gui : bool, optional
WARNING: internal parameter - do not use.
Use tqdm_gui(...) instead. If set, will attempt to use
matplotlib animations for a graphical output [default: False].
Returns
-------
out : decorated iterator.
"""
if disable is None and hasattr(file, "isatty") and not file.isatty():
disable = True
if disable:
self.iterable = iterable
self.disable = disable
self.pos = self._get_free_pos(self)
self._instances.remove(self)
return
if file is None:
file = sys.stderr
if kwargs:
self.disable = True
self.pos = self._get_free_pos(self)
self._instances.remove(self)
raise (
TqdmDeprecationWarning(
"""\
`nested` is deprecated and automated. Use position instead for manual control.
""",
fp_write=getattr(file, "write", sys.stderr.write),
)
if "nested" in kwargs
else TqdmKeyError("Unknown argument(s): " + str(kwargs))
)
# Preprocess the arguments
if total is None and iterable is not None:
try:
total = len(iterable)
except (TypeError, AttributeError):
total = None
if (
(ncols is None) and (file in (sys.stderr, sys.stdout))
) or dynamic_ncols: # pragma: no cover
if dynamic_ncols:
dynamic_ncols = _environ_cols_wrapper()
if dynamic_ncols:
ncols = dynamic_ncols(file)
# elif ncols is not None:
# ncols = 79
else:
_dynamic_ncols = _environ_cols_wrapper()
if _dynamic_ncols:
ncols = _dynamic_ncols(file)
# else:
# ncols = 79
if miniters is None:
miniters = 0
dynamic_miniters = True
else:
dynamic_miniters = False
if mininterval is None:
mininterval = 0
if maxinterval is None:
maxinterval = 0
if ascii is None:
ascii = not _supports_unicode(file)
if bar_format and not ascii:
# Convert bar format into unicode since terminal uses unicode
bar_format = _unicode(bar_format)
if smoothing is None:
smoothing = 0
# Store the arguments
self.iterable = iterable
self.desc = desc + ": " if desc else ""
self.total = total
self.leave = leave
self.fp = file
self.ncols = ncols
self.mininterval = mininterval
self.maxinterval = maxinterval
self.miniters = miniters
self.dynamic_miniters = dynamic_miniters
self.ascii = ascii
self.disable = disable
self.unit = unit
self.unit_scale = unit_scale
self.unit_divisor = unit_divisor
self.gui = gui
self.dynamic_ncols = dynamic_ncols
self.smoothing = smoothing
self.avg_time = None
self._time = time
self.bar_format = bar_format
self.postfix = None
if postfix:
self.set_postfix(**postfix)
# Init the iterations counters
self.last_print_n = initial
self.n = initial
# if nested, at initial sp() call we replace '\r' by '\n' to
# not overwrite the outer progress bar
if position is None:
self.pos = self._get_free_pos(self)
else:
self.pos = position
self._instances.remove(self)
if not gui:
# Initialize the screen printer
self.sp = self.status_printer(self.fp)
if self.pos:
self.moveto(self.pos)
self.sp(
self.format_meter(
self.n,
total,
0,
(dynamic_ncols(file) if dynamic_ncols else ncols),
self.desc,
ascii,
unit,
unit_scale,
None,
bar_format,
self.postfix,
unit_divisor,
)
)
if self.pos:
self.moveto(-self.pos)
# Init the time counter
self.last_print_t = self._time()
# NB: Avoid race conditions by setting start_t at the very end of init
self.start_t = self.last_print_t
|
def __init__(
self,
iterable=None,
desc=None,
total=None,
leave=True,
file=None,
ncols=None,
mininterval=0.1,
maxinterval=10.0,
miniters=None,
ascii=None,
disable=False,
unit="it",
unit_scale=False,
dynamic_ncols=False,
smoothing=0.3,
bar_format=None,
initial=0,
position=None,
postfix=None,
unit_divisor=1000,
gui=False,
**kwargs,
):
"""
Parameters
----------
iterable : iterable, optional
Iterable to decorate with a progressbar.
Leave blank to manually manage the updates.
desc : str, optional
Prefix for the progressbar.
total : int, optional
The number of expected iterations. If unspecified,
len(iterable) is used if possible. As a last resort, only basic
progress statistics are displayed (no ETA, no progressbar).
If `gui` is True and this parameter needs subsequent updating,
specify an initial arbitrary large positive integer,
e.g. int(9e9).
leave : bool, optional
If [default: True], keeps all traces of the progressbar
upon termination of iteration.
file : `io.TextIOWrapper` or `io.StringIO`, optional
Specifies where to output the progress messages
(default: sys.stderr). Uses `file.write(str)` and `file.flush()`
methods.
ncols : int, optional
The width of the entire output message. If specified,
dynamically resizes the progressbar to stay within this bound.
If unspecified, attempts to use environment width. The
fallback is a meter width of 10 and no limit for the counter and
statistics. If 0, will not print any meter (only stats).
mininterval : float, optional
Minimum progress display update interval, in seconds [default: 0.1].
maxinterval : float, optional
Maximum progress display update interval, in seconds [default: 10].
Automatically adjusts `miniters` to correspond to `mininterval`
after long display update lag. Only works if `dynamic_miniters`
or monitor thread is enabled.
miniters : int, optional
Minimum progress display update interval, in iterations.
If 0 and `dynamic_miniters`, will automatically adjust to equal
`mininterval` (more CPU efficient, good for tight loops).
If > 0, will skip display of specified number of iterations.
Tweak this and `mininterval` to get very efficient loops.
If your progress is erratic with both fast and slow iterations
(network, skipping items, etc) you should set miniters=1.
ascii : bool, optional
If unspecified or False, use unicode (smooth blocks) to fill
the meter. The fallback is to use ASCII characters `1-9 #`.
disable : bool, optional
Whether to disable the entire progressbar wrapper
[default: False]. If set to None, disable on non-TTY.
unit : str, optional
String that will be used to define the unit of each iteration
[default: it].
unit_scale : bool or int or float, optional
If 1 or True, the number of iterations will be reduced/scaled
automatically and a metric prefix following the
International System of Units standard will be added
(kilo, mega, etc.) [default: False]. If any other non-zero
number, will scale `total` and `n`.
dynamic_ncols : bool, optional
If set, constantly alters `ncols` to the environment (allowing
for window resizes) [default: False].
smoothing : float, optional
Exponential moving average smoothing factor for speed estimates
(ignored in GUI mode). Ranges from 0 (average speed) to 1
(current/instantaneous speed) [default: 0.3].
bar_format : str, optional
Specify a custom bar string formatting. May impact performance.
[default: '{l_bar}{bar}{r_bar}'], where
l_bar='{desc}: {percentage:3.0f}%|' and
r_bar='| {n_fmt}/{total_fmt} [{elapsed}<{remaining}, '
'{rate_fmt}{postfix}]'
Possible vars: l_bar, bar, r_bar, n, n_fmt, total, total_fmt,
percentage, rate, rate_fmt, rate_noinv, rate_noinv_fmt,
rate_inv, rate_inv_fmt, elapsed, remaining, desc, postfix.
Note that a trailing ": " is automatically removed after {desc}
if the latter is empty.
initial : int, optional
The initial counter value. Useful when restarting a progress
bar [default: 0].
position : int, optional
Specify the line offset to print this bar (starting from 0)
Automatic if unspecified.
Useful to manage multiple bars at once (eg, from threads).
postfix : dict or *, optional
Specify additional stats to display at the end of the bar.
Calls `set_postfix(**postfix)` if possible (dict).
unit_divisor : float, optional
[default: 1000], ignored unless `unit_scale` is True.
gui : bool, optional
WARNING: internal parameter - do not use.
Use tqdm_gui(...) instead. If set, will attempt to use
matplotlib animations for a graphical output [default: False].
Returns
-------
out : decorated iterator.
"""
if file is None:
file = sys.stderr
if disable is None and hasattr(file, "isatty") and not file.isatty():
disable = True
if disable:
self.iterable = iterable
self.disable = disable
self.pos = self._get_free_pos(self)
self._instances.remove(self)
self.n = initial
return
if kwargs:
self.disable = True
self.pos = self._get_free_pos(self)
self._instances.remove(self)
raise (
TqdmDeprecationWarning(
"""\
`nested` is deprecated and automated. Use position instead for manual control.
""",
fp_write=getattr(file, "write", sys.stderr.write),
)
if "nested" in kwargs
else TqdmKeyError("Unknown argument(s): " + str(kwargs))
)
# Preprocess the arguments
if total is None and iterable is not None:
try:
total = len(iterable)
except (TypeError, AttributeError):
total = None
if (
(ncols is None) and (file in (sys.stderr, sys.stdout))
) or dynamic_ncols: # pragma: no cover
if dynamic_ncols:
dynamic_ncols = _environ_cols_wrapper()
if dynamic_ncols:
ncols = dynamic_ncols(file)
# elif ncols is not None:
# ncols = 79
else:
_dynamic_ncols = _environ_cols_wrapper()
if _dynamic_ncols:
ncols = _dynamic_ncols(file)
# else:
# ncols = 79
if miniters is None:
miniters = 0
dynamic_miniters = True
else:
dynamic_miniters = False
if mininterval is None:
mininterval = 0
if maxinterval is None:
maxinterval = 0
if ascii is None:
ascii = not _supports_unicode(file)
if bar_format and not ascii:
# Convert bar format into unicode since terminal uses unicode
bar_format = _unicode(bar_format)
if smoothing is None:
smoothing = 0
# Store the arguments
self.iterable = iterable
self.desc = desc or ""
self.total = total
self.leave = leave
self.fp = file
self.ncols = ncols
self.mininterval = mininterval
self.maxinterval = maxinterval
self.miniters = miniters
self.dynamic_miniters = dynamic_miniters
self.ascii = ascii
self.disable = disable
self.unit = unit
self.unit_scale = unit_scale
self.unit_divisor = unit_divisor
self.gui = gui
self.dynamic_ncols = dynamic_ncols
self.smoothing = smoothing
self.avg_time = None
self._time = time
self.bar_format = bar_format
self.postfix = None
if postfix:
try:
self.set_postfix(refresh=False, **postfix)
except TypeError:
self.postfix = postfix
# Init the iterations counters
self.last_print_n = initial
self.n = initial
# if nested, at initial sp() call we replace '\r' by '\n' to
# not overwrite the outer progress bar
if position is None:
self.pos = self._get_free_pos(self)
else: # mark fixed positions as negative
self.pos = -position
if not gui:
# Initialize the screen printer
self.sp = self.status_printer(self.fp)
with self._lock:
if self.pos:
self.moveto(abs(self.pos))
self.sp(self.__repr__(elapsed=0))
if self.pos:
self.moveto(-abs(self.pos))
# Init the time counter
self.last_print_t = self._time()
# NB: Avoid race conditions by setting start_t at the very end of init
self.start_t = self.last_print_t
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def __repr__(self):
return self.format_meter(
self.n,
self.total,
self._time() - self.start_t,
self.dynamic_ncols(self.fp) if self.dynamic_ncols else self.ncols,
self.desc,
self.ascii,
self.unit,
self.unit_scale,
1 / self.avg_time if self.avg_time else None,
self.bar_format,
self.postfix,
)
|
def __repr__(self, elapsed=None):
return self.format_meter(
self.n,
self.total,
elapsed if elapsed is not None else self._time() - self.start_t,
self.dynamic_ncols(self.fp) if self.dynamic_ncols else self.ncols,
self.desc,
self.ascii,
self.unit,
self.unit_scale,
1 / self.avg_time if self.avg_time else None,
self.bar_format,
self.postfix,
self.unit_divisor,
)
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def __lt__(self, other):
return self.pos < other.pos
|
def __lt__(self, other):
return abs(self.pos) < abs(other.pos)
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def __eq__(self, other):
return self.pos == other.pos
|
def __eq__(self, other):
return abs(self.pos) == abs(other.pos)
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def __iter__(self):
"""Backward-compatibility to use: for x in tqdm(iterable)"""
# Inlining instance variables as locals (speed optimisation)
iterable = self.iterable
# If the bar is disabled, then just walk the iterable
# (note: keep this check outside the loop for performance)
if self.disable:
for obj in iterable:
yield obj
else:
ncols = self.ncols
mininterval = self.mininterval
maxinterval = self.maxinterval
miniters = self.miniters
dynamic_miniters = self.dynamic_miniters
unit = self.unit
unit_scale = self.unit_scale
unit_divisor = self.unit_divisor
ascii = self.ascii
start_t = self.start_t
last_print_t = self.last_print_t
last_print_n = self.last_print_n
n = self.n
dynamic_ncols = self.dynamic_ncols
smoothing = self.smoothing
avg_time = self.avg_time
bar_format = self.bar_format
_time = self._time
format_meter = self.format_meter
try:
sp = self.sp
except AttributeError:
raise TqdmDeprecationWarning(
"""\
Please use `tqdm_gui(...)` instead of `tqdm(..., gui=True)`
""",
fp_write=getattr(self.fp, "write", sys.stderr.write),
)
for obj in iterable:
yield obj
# Update and print the progressbar.
# Note: does not call self.update(1) for speed optimisation.
n += 1
# check the counter first (avoid calls to time())
if n - last_print_n >= self.miniters:
miniters = self.miniters # watch monitoring thread changes
delta_t = _time() - last_print_t
if delta_t >= mininterval:
cur_t = _time()
delta_it = n - last_print_n
elapsed = cur_t - start_t # optimised if in inner loop
# EMA (not just overall average)
if smoothing and delta_t and delta_it:
avg_time = (
delta_t / delta_it
if avg_time is None
else smoothing * delta_t / delta_it
+ (1 - smoothing) * avg_time
)
if self.pos:
self.moveto(self.pos)
# Printing the bar's update
sp(
format_meter(
n,
self.total,
elapsed,
(dynamic_ncols(self.fp) if dynamic_ncols else ncols),
self.desc,
ascii,
unit,
unit_scale,
1 / avg_time if avg_time else None,
bar_format,
self.postfix,
unit_divisor,
)
)
if self.pos:
self.moveto(-self.pos)
# If no `miniters` was specified, adjust automatically
# to the max iteration rate seen so far between 2 prints
if dynamic_miniters:
if maxinterval and delta_t >= maxinterval:
# Adjust miniters to time interval by rule of 3
if mininterval:
# Set miniters to correspond to mininterval
miniters = delta_it * mininterval / delta_t
else:
# Set miniters to correspond to maxinterval
miniters = delta_it * maxinterval / delta_t
elif smoothing:
# EMA-weight miniters to converge
# towards the timeframe of mininterval
miniters = (
smoothing
* delta_it
* (
mininterval / delta_t
if mininterval and delta_t
else 1
)
+ (1 - smoothing) * miniters
)
else:
# Maximum nb of iterations between 2 prints
miniters = max(miniters, delta_it)
# Store old values for next call
self.n = self.last_print_n = last_print_n = n
self.last_print_t = last_print_t = cur_t
self.miniters = miniters
# Closing the progress bar.
# Update some internal variables for close().
self.last_print_n = last_print_n
self.n = n
self.miniters = miniters
self.close()
|
def __iter__(self):
"""Backward-compatibility to use: for x in tqdm(iterable)"""
# Inlining instance variables as locals (speed optimisation)
iterable = self.iterable
# If the bar is disabled, then just walk the iterable
# (note: keep this check outside the loop for performance)
if self.disable:
for obj in iterable:
yield obj
else:
mininterval = self.mininterval
maxinterval = self.maxinterval
miniters = self.miniters
dynamic_miniters = self.dynamic_miniters
last_print_t = self.last_print_t
last_print_n = self.last_print_n
n = self.n
smoothing = self.smoothing
avg_time = self.avg_time
_time = self._time
try:
sp = self.sp
except AttributeError:
raise TqdmDeprecationWarning(
"""\
Please use `tqdm_gui(...)` instead of `tqdm(..., gui=True)`
""",
fp_write=getattr(self.fp, "write", sys.stderr.write),
)
for obj in iterable:
yield obj
# Update and possibly print the progressbar.
# Note: does not call self.update(1) for speed optimisation.
n += 1
# check counter first to avoid calls to time()
if n - last_print_n >= self.miniters:
miniters = self.miniters # watch monitoring thread changes
delta_t = _time() - last_print_t
if delta_t >= mininterval:
cur_t = _time()
delta_it = n - last_print_n
# EMA (not just overall average)
if smoothing and delta_t and delta_it:
avg_time = (
delta_t / delta_it
if avg_time is None
else smoothing * delta_t / delta_it
+ (1 - smoothing) * avg_time
)
self.n = n
with self._lock:
if self.pos:
self.moveto(abs(self.pos))
# Print bar update
sp(self.__repr__())
if self.pos:
self.moveto(-abs(self.pos))
# If no `miniters` was specified, adjust automatically
# to the max iteration rate seen so far between 2 prints
if dynamic_miniters:
if maxinterval and delta_t >= maxinterval:
# Adjust miniters to time interval by rule of 3
if mininterval:
# Set miniters to correspond to mininterval
miniters = delta_it * mininterval / delta_t
else:
# Set miniters to correspond to maxinterval
miniters = delta_it * maxinterval / delta_t
elif smoothing:
# EMA-weight miniters to converge
# towards the timeframe of mininterval
miniters = (
smoothing
* delta_it
* (
mininterval / delta_t
if mininterval and delta_t
else 1
)
+ (1 - smoothing) * miniters
)
else:
# Maximum nb of iterations between 2 prints
miniters = max(miniters, delta_it)
# Store old values for next call
self.n = self.last_print_n = last_print_n = n
self.last_print_t = last_print_t = cur_t
self.miniters = miniters
# Closing the progress bar.
# Update some internal variables for close().
self.last_print_n = last_print_n
self.n = n
self.miniters = miniters
self.close()
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def update(self, n=1):
"""
Manually update the progress bar, useful for streams
such as reading files.
E.g.:
>>> t = tqdm(total=filesize) # Initialise
>>> for current_buffer in stream:
... ...
... t.update(len(current_buffer))
>>> t.close()
The last line is highly recommended, but possibly not necessary if
`t.update()` will be called in such a way that `filesize` will be
exactly reached and printed.
Parameters
----------
n : int
Increment to add to the internal counter of iterations
[default: 1].
"""
if self.disable:
return
if n < 0:
raise ValueError("n ({0}) cannot be negative".format(n))
self.n += n
if self.n - self.last_print_n >= self.miniters:
# We check the counter first, to reduce the overhead of time()
delta_t = self._time() - self.last_print_t
if delta_t >= self.mininterval:
cur_t = self._time()
delta_it = self.n - self.last_print_n # should be n?
# elapsed = cur_t - self.start_t
# EMA (not just overall average)
if self.smoothing and delta_t and delta_it:
self.avg_time = (
delta_t / delta_it
if self.avg_time is None
else self.smoothing * delta_t / delta_it
+ (1 - self.smoothing) * self.avg_time
)
if not hasattr(self, "sp"):
raise TqdmDeprecationWarning(
"""\
Please use `tqdm_gui(...)` instead of `tqdm(..., gui=True)`
""",
fp_write=getattr(self.fp, "write", sys.stderr.write),
)
if self.pos:
self.moveto(self.pos)
# Print bar's update
self.sp(self.__repr__())
if self.pos:
self.moveto(-self.pos)
# If no `miniters` was specified, adjust automatically to the
# maximum iteration rate seen so far between two prints.
# e.g.: After running `tqdm.update(5)`, subsequent
# calls to `tqdm.update()` will only cause an update after
# at least 5 more iterations.
if self.dynamic_miniters:
if self.maxinterval and delta_t >= self.maxinterval:
if self.mininterval:
self.miniters = delta_it * self.mininterval / delta_t
else:
self.miniters = delta_it * self.maxinterval / delta_t
elif self.smoothing:
self.miniters = (
self.smoothing
* delta_it
* (
self.mininterval / delta_t
if self.mininterval and delta_t
else 1
)
+ (1 - self.smoothing) * self.miniters
)
else:
self.miniters = max(self.miniters, delta_it)
# Store old values for next call
self.last_print_n = self.n
self.last_print_t = cur_t
|
def update(self, n=1):
"""
Manually update the progress bar, useful for streams
such as reading files.
E.g.:
>>> t = tqdm(total=filesize) # Initialise
>>> for current_buffer in stream:
... ...
... t.update(len(current_buffer))
>>> t.close()
The last line is highly recommended, but possibly not necessary if
`t.update()` will be called in such a way that `filesize` will be
exactly reached and printed.
Parameters
----------
n : int, optional
Increment to add to the internal counter of iterations
[default: 1].
"""
# N.B.: see __iter__() for more comments.
if self.disable:
return
if n < 0:
raise ValueError("n ({0}) cannot be negative".format(n))
self.n += n
# check counter first to reduce calls to time()
if self.n - self.last_print_n >= self.miniters:
delta_t = self._time() - self.last_print_t
if delta_t >= self.mininterval:
cur_t = self._time()
delta_it = self.n - self.last_print_n # >= n
# elapsed = cur_t - self.start_t
# EMA (not just overall average)
if self.smoothing and delta_t and delta_it:
self.avg_time = (
delta_t / delta_it
if self.avg_time is None
else self.smoothing * delta_t / delta_it
+ (1 - self.smoothing) * self.avg_time
)
if not hasattr(self, "sp"):
raise TqdmDeprecationWarning(
"""\
Please use `tqdm_gui(...)` instead of `tqdm(..., gui=True)`
""",
fp_write=getattr(self.fp, "write", sys.stderr.write),
)
with self._lock:
if self.pos:
self.moveto(abs(self.pos))
# Print bar update
self.sp(self.__repr__())
if self.pos:
self.moveto(-abs(self.pos))
# If no `miniters` was specified, adjust automatically to the
# maximum iteration rate seen so far between two prints.
# e.g.: After running `tqdm.update(5)`, subsequent
# calls to `tqdm.update()` will only cause an update after
# at least 5 more iterations.
if self.dynamic_miniters:
if self.maxinterval and delta_t >= self.maxinterval:
if self.mininterval:
self.miniters = delta_it * self.mininterval / delta_t
else:
self.miniters = delta_it * self.maxinterval / delta_t
elif self.smoothing:
self.miniters = (
self.smoothing
* delta_it
* (
self.mininterval / delta_t
if self.mininterval and delta_t
else 1
)
+ (1 - self.smoothing) * self.miniters
)
else:
self.miniters = max(self.miniters, delta_it)
# Store old values for next call
self.last_print_n = self.n
self.last_print_t = cur_t
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def close(self):
"""
Cleanup and (if leave=False) close the progressbar.
"""
if self.disable:
return
# Prevent multiple closures
self.disable = True
# decrement instance pos and remove from internal set
pos = self.pos
self._decr_instances(self)
# GUI mode
if not hasattr(self, "sp"):
return
# annoyingly, _supports_unicode isn't good enough
def fp_write(s):
self.fp.write(_unicode(s))
try:
fp_write("")
except ValueError as e:
if "closed" in str(e):
return
raise # pragma: no cover
if pos:
self.moveto(pos)
if self.leave:
if self.last_print_n < self.n:
cur_t = self._time()
# stats for overall rate (no weighted average)
self.sp(
self.format_meter(
self.n,
self.total,
cur_t - self.start_t,
(self.dynamic_ncols(self.fp) if self.dynamic_ncols else self.ncols),
self.desc,
self.ascii,
self.unit,
self.unit_scale,
None,
self.bar_format,
self.postfix,
self.unit_divisor,
)
)
if pos:
self.moveto(-pos)
else:
fp_write("\n")
else:
self.sp("") # clear up last bar
if pos:
self.moveto(-pos)
else:
fp_write("\r")
|
def close(self):
"""
Cleanup and (if leave=False) close the progressbar.
"""
if self.disable:
return
# Prevent multiple closures
self.disable = True
# decrement instance pos and remove from internal set
pos = abs(self.pos)
self._decr_instances(self)
# GUI mode
if not hasattr(self, "sp"):
return
# annoyingly, _supports_unicode isn't good enough
def fp_write(s):
self.fp.write(_unicode(s))
try:
fp_write("")
except ValueError as e:
if "closed" in str(e):
return
raise # pragma: no cover
with self._lock:
if pos:
self.moveto(pos)
if self.leave:
if self.last_print_n < self.n:
# stats for overall rate (no weighted average)
self.avg_time = None
self.sp(self.__repr__())
if pos:
self.moveto(-pos)
else:
fp_write("\n")
else:
self.sp("") # clear up last bar
if pos:
self.moveto(-pos)
else:
fp_write("\r")
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def set_description(self, desc=None):
"""
Set/modify description of the progress bar.
"""
self.desc = desc + ": " if desc else ""
|
def set_description(self, desc=None, refresh=True):
"""
Set/modify description of the progress bar.
Parameters
----------
desc : str, optional
refresh : bool, optional
Forces refresh [default: True].
"""
self.desc = desc + ": " if desc else ""
if refresh:
self.refresh()
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def set_postfix(self, ordered_dict=None, **kwargs):
"""
Set/modify postfix (additional stats)
with automatic formatting based on datatype.
"""
# Sort in alphabetical order to be more deterministic
postfix = _OrderedDict([] if ordered_dict is None else ordered_dict)
for key in sorted(kwargs.keys()):
postfix[key] = kwargs[key]
# Preprocess stats according to datatype
for key in postfix.keys():
# Number: limit the length of the string
if isinstance(postfix[key], Number):
postfix[key] = "{0:2.3g}".format(postfix[key])
# Else for any other type, try to get the string conversion
elif not isinstance(postfix[key], _basestring):
postfix[key] = str(postfix[key])
# Else if it's a string, don't need to preprocess anything
# Stitch together to get the final postfix
self.postfix = ", ".join(key + "=" + postfix[key].strip() for key in postfix.keys())
|
def set_postfix(self, ordered_dict=None, refresh=True, **kwargs):
"""
Set/modify postfix (additional stats)
with automatic formatting based on datatype.
Parameters
----------
ordered_dict : dict or OrderedDict, optional
refresh : bool, optional
Forces refresh [default: True].
kwargs : dict, optional
"""
# Sort in alphabetical order to be more deterministic
postfix = _OrderedDict([] if ordered_dict is None else ordered_dict)
for key in sorted(kwargs.keys()):
postfix[key] = kwargs[key]
# Preprocess stats according to datatype
for key in postfix.keys():
# Number: limit the length of the string
if isinstance(postfix[key], Number):
postfix[key] = "{0:2.3g}".format(postfix[key])
# Else for any other type, try to get the string conversion
elif not isinstance(postfix[key], _basestring):
postfix[key] = str(postfix[key])
# Else if it's a string, don't need to preprocess anything
# Stitch together to get the final postfix
self.postfix = ", ".join(key + "=" + postfix[key].strip() for key in postfix.keys())
if refresh:
self.refresh()
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def moveto(self, n):
self.fp.write(_unicode("\n" * n + _term_move_up() * -n))
|
def moveto(self, n):
self.fp.write(_unicode("\n" * n + _term_move_up() * -n))
self.fp.flush()
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def clear(self, nomove=False):
"""
Clear current bar display
"""
if self.disable:
return
if not nomove:
self.moveto(self.pos)
# clear up the bar (can't rely on sp(''))
self.fp.write("\r")
self.fp.write(" " * (self.ncols if self.ncols else 10))
self.fp.write("\r") # place cursor back at the beginning of line
if not nomove:
self.moveto(-self.pos)
|
def clear(self, nolock=False):
"""
Clear current bar display
"""
if self.disable:
return
if not nolock:
self._lock.acquire()
self.moveto(abs(self.pos))
self.sp("")
self.fp.write("\r") # place cursor back at the beginning of line
self.moveto(-abs(self.pos))
if not nolock:
self._lock.release()
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def refresh(self):
"""
Force refresh the display of this bar
"""
if self.disable:
return
self.moveto(self.pos)
# clear up this line's content (whatever there was)
self.clear(nomove=True)
# Print current/last bar state
self.fp.write(self.__repr__())
self.moveto(-self.pos)
|
def refresh(self, nolock=False):
"""
Force refresh the display of this bar
"""
if self.disable:
return
if not nolock:
self._lock.acquire()
self.moveto(abs(self.pos))
self.sp(self.__repr__())
self.moveto(-abs(self.pos))
if not nolock:
self._lock.release()
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def _is_utf(encoding):
return encoding.lower().startswith("utf-") or ("U8" == encoding)
|
def _is_utf(encoding):
try:
"\u2588\u2589".encode(encoding)
except UnicodeEncodeError: # pragma: no cover
return False
except Exception: # pragma: no cover
try:
return encoding.lower().startswith("utf-") or ("U8" == encoding)
except:
return False
else:
return True
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def _supports_unicode(file):
return (
_is_utf(file.encoding)
if (
getattr(file, "encoding", None)
or
# FakeStreams from things like bpython-curses can lie
getattr(file, "interface", None)
)
else False
) # pragma: no cover
|
def _supports_unicode(fp):
try:
return _is_utf(fp.encoding)
except AttributeError:
return False
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def _environ_cols_windows(fp): # pragma: no cover
try:
from ctypes import windll, create_string_buffer
import struct
from sys import stdin, stdout
io_handle = None
if fp == stdin:
io_handle = -10
elif fp == stdout:
io_handle = -11
else: # assume stderr
io_handle = -12
h = windll.kernel32.GetStdHandle(io_handle)
csbi = create_string_buffer(22)
res = windll.kernel32.GetConsoleScreenBufferInfo(h, csbi)
if res:
(
_bufx,
_bufy,
_curx,
_cury,
_wattr,
left,
_top,
right,
_bottom,
_maxx,
_maxy,
) = struct.unpack("hhhhHhhhhhh", csbi.raw)
# nlines = bottom - top + 1
return right - left # +1
except:
pass
return None
|
def _environ_cols_windows(fp): # pragma: no cover
try:
from ctypes import windll, create_string_buffer
import struct
from sys import stdin, stdout
io_handle = -12 # assume stderr
if fp == stdin:
io_handle = -10
elif fp == stdout:
io_handle = -11
h = windll.kernel32.GetStdHandle(io_handle)
csbi = create_string_buffer(22)
res = windll.kernel32.GetConsoleScreenBufferInfo(h, csbi)
if res:
(
_bufx,
_bufy,
_curx,
_cury,
_wattr,
left,
_top,
right,
_bottom,
_maxx,
_maxy,
) = struct.unpack("hhhhHhhhhhh", csbi.raw)
# nlines = bottom - top + 1
return right - left # +1
except:
pass
return None
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def _environ_cols_tput(*args): # pragma: no cover
"""cygwin xterm (windows)"""
try:
import shlex
cols = int(subprocess.check_call(shlex.split("tput cols")))
# rows = int(subprocess.check_call(shlex.split('tput lines')))
return cols
except:
pass
return None
|
def _environ_cols_tput(*_): # pragma: no cover
"""cygwin xterm (windows)"""
try:
import shlex
cols = int(subprocess.check_call(shlex.split("tput cols")))
# rows = int(subprocess.check_call(shlex.split('tput lines')))
return cols
except:
pass
return None
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def __reduce__(self):
items = [[k, self[k]] for k in self]
inst_dict = vars(self).copy()
inst_dict.pop("_keys", None)
return (self.__class__, (items,), inst_dict)
|
def __reduce__(self):
items = [[k, self[k]] for k in self]
inst_dict = vars(self).copy()
inst_dict.pop("_keys", None)
return self.__class__, (items,), inst_dict
|
https://github.com/conda/conda/issues/7040
|
[s1758208@login04(eddie) ~]$ conda create -n test
[s1758208@login04(eddie) ~]$ conda activate test
(test) [s1758208@login04(eddie) ~]$ conda install python
Solving environment: done
## Package Plan ##
environment location: /exports/csce/eddie/ph/groups/rbm_ml/michael/myconda/envs/test
added / updated specs:
- python
The following packages will be downloaded:
package | build
---------------------------|-----------------
python-3.6.4 | hc3d631a_3 29.1 MB
libstdcxx-ng-7.2.0 | hdf63c60_3 2.5 MB
certifi-2018.1.18 | py36_0 144 KB
zlib-1.2.11 | ha838bed_2 101 KB
sqlite-3.22.0 | h1bed415_0 1.5 MB
wheel-0.30.0 | py36hfd4bba0_1 67 KB
openssl-1.0.2n | hb7f436b_0 3.4 MB
libffi-3.2.1 | hd88cf55_4 43 KB
libgcc-ng-7.2.0 | hdf63c60_3 6.1 MB
ncurses-6.0 | h9df7e31_2 920 KB
tk-8.6.7 | hc745277_3 3.2 MB
setuptools-38.5.1 | py36_0 525 KB
pip-9.0.1 | py36_5 2.2 MB
libedit-3.1 | heed3624_0 171 KB
ca-certificates-2017.08.26 | h1d4fec5_0 263 KB
------------------------------------------------------------
Total: 50.2 MB
The following NEW packages will be INSTALLED:
ca-certificates: 2017.08.26-h1d4fec5_0
certifi: 2018.1.18-py36_0
libedit: 3.1-heed3624_0
libffi: 3.2.1-hd88cf55_4
libgcc-ng: 7.2.0-hdf63c60_3
libstdcxx-ng: 7.2.0-hdf63c60_3
ncurses: 6.0-h9df7e31_2
openssl: 1.0.2n-hb7f436b_0
pip: 9.0.1-py36_5
python: 3.6.4-hc3d631a_3
readline: 7.0-ha6073c6_4
setuptools: 38.5.1-py36_0
sqlite: 3.22.0-h1bed415_0
tk: 8.6.7-hc745277_3
wheel: 0.30.0-py36hfd4bba0_1
xz: 5.2.3-h55aa19d_2
zlib: 1.2.11-ha838bed_2
Proceed ([y]/n)? y
Downloading and Extracting Packages
python 3.6.4: ########################################################## | 100%
libstdcxx-ng 7.2.0: #################################################### | 100%
certifi 2018.1.18: ##################################################### | 100%
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 255, in install
handle_txn(progressive_fetch_extract, unlink_link_transaction, prefix, args, newenv)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/cli/install.py", line 281, in handle_txn
progressive_fetch_extract.execute()
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 584, in execute
exc = self._execute_actions(prec_or_spec, prec_actions)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/core/package_cache.py", line 599, in _execute_actions
progress_bar = ProgressBar(desc, not context.verbosity and not context.quiet, context.json)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/common/io.py", line 390, in __init__
self.pbar = tqdm(desc=description, bar_format=bar_format, ascii=True, total=1)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 388, in __new__
cls.monitor = TMonitor(cls, cls.monitor_interval)
File "/home/s1758208/miniconda3/lib/python3.6/site-packages/conda/_vendor/tqdm/_tqdm.py", line 83, in __init__
self.start()
File "/home/s1758208/miniconda3/lib/python3.6/threading.py", line 846, in start
_start_new_thread(self._bootstrap, ())
RuntimeError: can't start new thread
|
RuntimeError
|
def explicit(
specs, prefix, verbose=False, force_extract=True, index_args=None, index=None
):
actions = defaultdict(list)
actions["PREFIX"] = prefix
fetch_specs = []
for spec in specs:
if spec == "@EXPLICIT":
continue
if not is_url(spec):
spec = unquote(path_to_url(expand(spec)))
# parse URL
m = url_pat.match(spec)
if m is None:
raise ParseError("Could not parse explicit URL: %s" % spec)
url_p, fn, md5sum = m.group("url_p"), m.group("fn"), m.group("md5")
url = join_url(url_p, fn)
# url_p is everything but the tarball_basename and the md5sum
fetch_specs.append(MatchSpec(url, md5=md5sum) if md5sum else MatchSpec(url))
if context.dry_run:
raise DryRunExit()
pfe = ProgressiveFetchExtract(fetch_specs)
pfe.execute()
# now make an UnlinkLinkTransaction with the PackageCacheRecords as inputs
# need to add package name to fetch_specs so that history parsing keeps track of them correctly
specs_pcrecs = tuple(
[spec, next(PackageCacheData.query_all(spec), None)] for spec in fetch_specs
)
assert not any(spec_pcrec[1] is None for spec_pcrec in specs_pcrecs)
precs_to_remove = []
prefix_data = PrefixData(prefix)
for q, (spec, pcrec) in enumerate(specs_pcrecs):
new_spec = MatchSpec(spec, name=pcrec.name)
specs_pcrecs[q][0] = new_spec
prec = prefix_data.get(pcrec.name, None)
if prec:
precs_to_remove.append(prec)
stp = PrefixSetup(
prefix,
precs_to_remove,
tuple(sp[1] for sp in specs_pcrecs),
(),
tuple(sp[0] for sp in specs_pcrecs),
)
txn = UnlinkLinkTransaction(stp)
txn.execute()
|
def explicit(
specs, prefix, verbose=False, force_extract=True, index_args=None, index=None
):
actions = defaultdict(list)
actions["PREFIX"] = prefix
fetch_specs = []
for spec in specs:
if spec == "@EXPLICIT":
continue
if not is_url(spec):
spec = unquote(path_to_url(expand(spec)))
# parse URL
m = url_pat.match(spec)
if m is None:
raise ParseError("Could not parse explicit URL: %s" % spec)
url_p, fn, md5sum = m.group("url_p"), m.group("fn"), m.group("md5")
url = join_url(url_p, fn)
# url_p is everything but the tarball_basename and the md5sum
fetch_specs.append(MatchSpec(url, md5=md5sum) if md5sum else MatchSpec(url))
pfe = ProgressiveFetchExtract(fetch_specs)
pfe.execute()
# now make an UnlinkLinkTransaction with the PackageCacheRecords as inputs
# need to add package name to fetch_specs so that history parsing keeps track of them correctly
specs_pcrecs = tuple(
[spec, next(PackageCacheData.query_all(spec), None)] for spec in fetch_specs
)
assert not any(spec_pcrec[1] is None for spec_pcrec in specs_pcrecs)
precs_to_remove = []
prefix_data = PrefixData(prefix)
for q, (spec, pcrec) in enumerate(specs_pcrecs):
new_spec = MatchSpec(spec, name=pcrec.name)
specs_pcrecs[q][0] = new_spec
prec = prefix_data.get(pcrec.name, None)
if prec:
precs_to_remove.append(prec)
stp = PrefixSetup(
prefix,
precs_to_remove,
tuple(sp[1] for sp in specs_pcrecs),
(),
tuple(sp[0] for sp in specs_pcrecs),
)
txn = UnlinkLinkTransaction(stp)
txn.execute()
|
https://github.com/conda/conda/issues/7094
|
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/anaconda/lib/python2.7/site-packages/conda/exceptions.py", line 812, in __call__
return func(*args, **kwargs)
File "/anaconda/lib/python2.7/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/anaconda/lib/python2.7/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/anaconda/lib/python2.7/site-packages/conda/cli/main_create.py", line 11, in execute
install(args, parser, 'create')
File "/anaconda/lib/python2.7/site-packages/conda/cli/install.py", line 211, in install
clone(args.clone, prefix, json=context.json, quiet=context.quiet, index_args=index_args)
File "/anaconda/lib/python2.7/site-packages/conda/cli/install.py", line 72, in clone
index_args=index_args)
File "/anaconda/lib/python2.7/site-packages/conda/misc.py", line 271, in clone_env
force_extract=False, index_args=index_args)
File "/anaconda/lib/python2.7/site-packages/conda/misc.py", line 69, in explicit
pfe.execute()
File "/anaconda/lib/python2.7/site-packages/conda/core/package_cache_data.py", line 578, in execute
assert not context.dry_run
AssertionError
|
AssertionError
|
def clone_env(prefix1, prefix2, verbose=True, quiet=False, index_args=None):
"""
clone existing prefix1 into new prefix2
"""
untracked_files = untracked(prefix1)
# Discard conda, conda-env and any package that depends on them
drecs = linked_data(prefix1)
filter = {}
found = True
while found:
found = False
for dist, info in iteritems(drecs):
name = info["name"]
if name in filter:
continue
if name == "conda":
filter["conda"] = dist
found = True
break
if name == "conda-env":
filter["conda-env"] = dist
found = True
break
for dep in info.combined_depends:
if MatchSpec(dep).name in filter:
filter[name] = dist
found = True
if filter:
if not quiet:
fh = sys.stderr if context.json else sys.stdout
print(
"The following packages cannot be cloned out of the root environment:",
file=fh,
)
for pkg in itervalues(filter):
print(" - " + pkg.dist_name, file=fh)
drecs = {
dist: info
for dist, info in iteritems(drecs)
if info["name"] not in filter
}
# Resolve URLs for packages that do not have URLs
r = None
index = {}
unknowns = [dist for dist, info in iteritems(drecs) if not info.get("url")]
notfound = []
if unknowns:
index_args = index_args or {}
index = get_index(**index_args)
r = Resolve(index, sort=True)
for dist in unknowns:
name = dist.dist_name
fn = dist.to_filename()
fkeys = [d for d in r.index.keys() if r.index[d]["fn"] == fn]
if fkeys:
del drecs[dist]
dist_str = sorted(fkeys, key=r.version_key, reverse=True)[0]
drecs[Dist(dist_str)] = r.index[dist_str]
else:
notfound.append(fn)
if notfound:
raise PackagesNotFoundError(notfound)
# Assemble the URL and channel list
urls = {}
for dist, info in iteritems(drecs):
fkey = dist
if fkey not in index:
index[fkey] = PackageRecord.from_objects(info, not_fetched=True)
r = None
urls[dist] = info["url"]
if r is None:
r = Resolve(index)
dists = r.dependency_sort({d.quad[0]: d for d in urls.keys()})
urls = [urls[d] for d in dists]
precs = tuple(index[dist] for dist in dists)
disallowed = tuple(MatchSpec(s) for s in context.disallowed_packages)
for prec in precs:
if any(d.match(prec) for d in disallowed):
raise DisallowedPackageError(prec)
if verbose:
print("Packages: %d" % len(dists))
print("Files: %d" % len(untracked_files))
if context.dry_run:
raise DryRunExit()
for f in untracked_files:
src = join(prefix1, f)
dst = join(prefix2, f)
dst_dir = dirname(dst)
if islink(dst_dir) or isfile(dst_dir):
rm_rf(dst_dir)
if not isdir(dst_dir):
os.makedirs(dst_dir)
if islink(src):
symlink(readlink(src), dst)
continue
try:
with open(src, "rb") as fi:
data = fi.read()
except IOError:
continue
try:
s = data.decode("utf-8")
s = s.replace(prefix1, prefix2)
data = s.encode("utf-8")
except UnicodeDecodeError: # data is binary
pass
with open(dst, "wb") as fo:
fo.write(data)
shutil.copystat(src, dst)
actions = explicit(
urls,
prefix2,
verbose=not quiet,
index=index,
force_extract=False,
index_args=index_args,
)
return actions, untracked_files
|
def clone_env(prefix1, prefix2, verbose=True, quiet=False, index_args=None):
"""
clone existing prefix1 into new prefix2
"""
untracked_files = untracked(prefix1)
# Discard conda, conda-env and any package that depends on them
drecs = linked_data(prefix1)
filter = {}
found = True
while found:
found = False
for dist, info in iteritems(drecs):
name = info["name"]
if name in filter:
continue
if name == "conda":
filter["conda"] = dist
found = True
break
if name == "conda-env":
filter["conda-env"] = dist
found = True
break
for dep in info.combined_depends:
if MatchSpec(dep).name in filter:
filter[name] = dist
found = True
if filter:
if not quiet:
fh = sys.stderr if context.json else sys.stdout
print(
"The following packages cannot be cloned out of the root environment:",
file=fh,
)
for pkg in itervalues(filter):
print(" - " + pkg.dist_name, file=fh)
drecs = {
dist: info
for dist, info in iteritems(drecs)
if info["name"] not in filter
}
# Resolve URLs for packages that do not have URLs
r = None
index = {}
unknowns = [dist for dist, info in iteritems(drecs) if not info.get("url")]
notfound = []
if unknowns:
index_args = index_args or {}
index = get_index(**index_args)
r = Resolve(index, sort=True)
for dist in unknowns:
name = dist.dist_name
fn = dist.to_filename()
fkeys = [d for d in r.index.keys() if r.index[d]["fn"] == fn]
if fkeys:
del drecs[dist]
dist_str = sorted(fkeys, key=r.version_key, reverse=True)[0]
drecs[Dist(dist_str)] = r.index[dist_str]
else:
notfound.append(fn)
if notfound:
raise PackagesNotFoundError(notfound)
# Assemble the URL and channel list
urls = {}
for dist, info in iteritems(drecs):
fkey = dist
if fkey not in index:
index[fkey] = PackageRecord.from_objects(info, not_fetched=True)
r = None
urls[dist] = info["url"]
if r is None:
r = Resolve(index)
dists = r.dependency_sort({d.quad[0]: d for d in urls.keys()})
urls = [urls[d] for d in dists]
precs = tuple(index[dist] for dist in dists)
disallowed = tuple(MatchSpec(s) for s in context.disallowed_packages)
for prec in precs:
if any(d.match(prec) for d in disallowed):
raise DisallowedPackageError(prec)
if verbose:
print("Packages: %d" % len(dists))
print("Files: %d" % len(untracked_files))
for f in untracked_files:
src = join(prefix1, f)
dst = join(prefix2, f)
dst_dir = dirname(dst)
if islink(dst_dir) or isfile(dst_dir):
rm_rf(dst_dir)
if not isdir(dst_dir):
os.makedirs(dst_dir)
if islink(src):
symlink(readlink(src), dst)
continue
try:
with open(src, "rb") as fi:
data = fi.read()
except IOError:
continue
try:
s = data.decode("utf-8")
s = s.replace(prefix1, prefix2)
data = s.encode("utf-8")
except UnicodeDecodeError: # data is binary
pass
with open(dst, "wb") as fo:
fo.write(data)
shutil.copystat(src, dst)
actions = explicit(
urls,
prefix2,
verbose=not quiet,
index=index,
force_extract=False,
index_args=index_args,
)
return actions, untracked_files
|
https://github.com/conda/conda/issues/7094
|
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/anaconda/lib/python2.7/site-packages/conda/exceptions.py", line 812, in __call__
return func(*args, **kwargs)
File "/anaconda/lib/python2.7/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/anaconda/lib/python2.7/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/anaconda/lib/python2.7/site-packages/conda/cli/main_create.py", line 11, in execute
install(args, parser, 'create')
File "/anaconda/lib/python2.7/site-packages/conda/cli/install.py", line 211, in install
clone(args.clone, prefix, json=context.json, quiet=context.quiet, index_args=index_args)
File "/anaconda/lib/python2.7/site-packages/conda/cli/install.py", line 72, in clone
index_args=index_args)
File "/anaconda/lib/python2.7/site-packages/conda/misc.py", line 271, in clone_env
force_extract=False, index_args=index_args)
File "/anaconda/lib/python2.7/site-packages/conda/misc.py", line 69, in explicit
pfe.execute()
File "/anaconda/lib/python2.7/site-packages/conda/core/package_cache_data.py", line 578, in execute
assert not context.dry_run
AssertionError
|
AssertionError
|
def box(self, instance, instance_type, val):
if isinstance(val, string_types):
val = val.replace(" ", ",").split(",")
val = tuple(f for f in (ff.strip() for ff in val) if f)
return super(_FeaturesField, self).box(instance, instance_type, val)
|
def box(self, instance, instance_type, val):
if isinstance(val, string_types):
val = val.replace(" ", ",").split(",")
return super(_FeaturesField, self).box(instance, instance_type, val)
|
https://github.com/conda/conda/issues/6860
|
(base) [nwani@centos7-nwani scratch]$ conda install scratch -c local
Solving environment: failed
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/nwani/m2/lib/python2.7/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/nwani/m2/lib/python2.7/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/nwani/m2/lib/python2.7/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/nwani/m2/lib/python2.7/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/nwani/m2/lib/python2.7/site-packages/conda/cli/install.py", line 236, in install
force_reinstall=context.force,
File "/home/nwani/m2/lib/python2.7/site-packages/conda/core/solve.py", line 504, in solve_for_transaction
force_remove, force_reinstall)
File "/home/nwani/m2/lib/python2.7/site-packages/conda/core/solve.py", line 437, in solve_for_diff
final_precs = self.solve_final_state(deps_modifier, prune, ignore_pinned, force_remove)
File "/home/nwani/m2/lib/python2.7/site-packages/conda/core/solve.py", line 317, in solve_final_state
conflicting_specs = r.get_conflicting_specs(tuple(final_environment_specs))
File "/home/nwani/m2/lib/python2.7/site-packages/conda/resolve.py", line 705, in get_conflicting_specs
C = r2.gen_clauses()
File "/home/nwani/m2/lib/python2.7/site-packages/conda/resolve.py", line 505, in gen_clauses
C.Require(C.Or, nkey, self.push_MatchSpec(C, ms))
File "/home/nwani/m2/lib/python2.7/site-packages/conda/resolve.py", line 477, in push_MatchSpec
m = C.from_name(self.push_MatchSpec(C, ms2))
File "/home/nwani/m2/lib/python2.7/site-packages/conda/resolve.py", line 477, in push_MatchSpec
m = C.from_name(self.push_MatchSpec(C, ms2))
...yada...
...yada...
...yada...
File "/home/nwani/m2/lib/python2.7/site-packages/conda/resolve.py", line 477, in push_MatchSpec
m = C.from_name(self.push_MatchSpec(C, ms2))
File "/home/nwani/m2/lib/python2.7/site-packages/conda/resolve.py", line 477, in push_MatchSpec
m = C.from_name(self.push_MatchSpec(C, ms2))
File "/home/nwani/m2/lib/python2.7/site-packages/conda/resolve.py", line 477, in push_MatchSpec
m = C.from_name(self.push_MatchSpec(C, ms2))
File "/home/nwani/m2/lib/python2.7/site-packages/conda/resolve.py", line 476, in push_MatchSpec
ms2 = MatchSpec(track_features=tf) if tf else MatchSpec(nm)
File "/home/nwani/m2/lib/python2.7/site-packages/conda/models/match_spec.py", line 76, in __call__
return super(MatchSpecType, cls).__call__(**kwargs)
File "/home/nwani/m2/lib/python2.7/site-packages/conda/models/match_spec.py", line 178, in __init__
self._match_components = self._build_components(**kwargs)
File "/home/nwani/m2/lib/python2.7/site-packages/conda/models/match_spec.py", line 365, in _build_components
return frozendict(_make(key, value) for key, value in iteritems(kwargs))
File "/home/nwani/m2/lib/python2.7/collections.py", line 69, in __init__
self.__update(*args, **kwds)
File "/home/nwani/m2/lib/python2.7/_abcoll.py", line 564, in update
if isinstance(other, Mapping):
File "/home/nwani/m2/lib/python2.7/abc.py", line 141, in __instancecheck__
subtype in cls._abc_negative_cache):
File "/home/nwani/m2/lib/python2.7/_weakrefset.py", line 75, in __contains__
return wr in self.data
RuntimeError: maximum recursion depth exceeded in cmp
`$ /home/nwani/m2/bin/conda install scratch -c local`
environment variables:
CIO_TEST=<not set>
CONDA_DEFAULT_ENV=base
CONDA_PREFIX=/home/nwani/m2
CONDA_PROMPT_MODIFIER=(base)
CONDA_PYTHON_EXE=/home/nwani/m2/bin/python
CONDA_ROOT=/home/nwani/m2
CONDA_SHLVL=1
PATH=/home/nwani/m2/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/
home/nwani/.local/bin:/home/nwani/bin
REQUESTS_CA_BUNDLE=<not set>
SSL_CERT_FILE=<not set>
active environment : base
active env location : /home/nwani/m2
shell level : 1
user config file : /home/nwani/.condarc
populated config files :
conda version : 4.4.9
conda-build version : 3.4.1
python version : 2.7.14.final.0
base environment : /home/nwani/m2 (writable)
channel URLs : file:///home/nwani/m2/conda-bld/linux-64
file:///home/nwani/m2/conda-bld/noarch
https://repo.continuum.io/pkgs/main/linux-64
https://repo.continuum.io/pkgs/main/noarch
https://repo.continuum.io/pkgs/free/linux-64
https://repo.continuum.io/pkgs/free/noarch
https://repo.continuum.io/pkgs/r/linux-64
https://repo.continuum.io/pkgs/r/noarch
https://repo.continuum.io/pkgs/pro/linux-64
https://repo.continuum.io/pkgs/pro/noarch
package cache : /home/nwani/m2/pkgs
/home/nwani/.conda/pkgs
envs directories : /home/nwani/m2/envs
/home/nwani/.conda/envs
platform : linux-64
user-agent : conda/4.4.9 requests/2.18.4 CPython/2.7.14 Linux/3.10.0-693.5.2.el7.x86_64 centos/7 glibc/2.17
UID:GID : 1001:1001
netrc file : None
offline mode : False
An unexpected error has occurred. Conda has prepared the above report.
If submitted, this report will be used by core maintainers to improve
future releases of conda.
Would you like conda to send this report to the core maintainers?
[y/N]: y
Upload did not complete.
Thank you for helping to improve conda.
Opt-in to always sending reports (and not see this message again)
by running
$ conda config --set report_errors true
|
RuntimeError
|
def _convert(self, value):
if not value:
return frozenset()
elif isinstance(value, string_types):
return frozenset(
f for f in (ff.strip() for ff in value.replace(" ", ",").split(",")) if f
)
else:
return frozenset(f for f in (ff.strip() for ff in value) if f)
|
def _convert(self, value):
if isinstance(value, frozenset):
return value
elif not value:
return frozenset()
elif isinstance(value, string_types):
return frozenset(value.replace(" ", ",").split(","))
else:
return frozenset(value)
|
https://github.com/conda/conda/issues/6860
|
(base) [nwani@centos7-nwani scratch]$ conda install scratch -c local
Solving environment: failed
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/nwani/m2/lib/python2.7/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/nwani/m2/lib/python2.7/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/nwani/m2/lib/python2.7/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/nwani/m2/lib/python2.7/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/nwani/m2/lib/python2.7/site-packages/conda/cli/install.py", line 236, in install
force_reinstall=context.force,
File "/home/nwani/m2/lib/python2.7/site-packages/conda/core/solve.py", line 504, in solve_for_transaction
force_remove, force_reinstall)
File "/home/nwani/m2/lib/python2.7/site-packages/conda/core/solve.py", line 437, in solve_for_diff
final_precs = self.solve_final_state(deps_modifier, prune, ignore_pinned, force_remove)
File "/home/nwani/m2/lib/python2.7/site-packages/conda/core/solve.py", line 317, in solve_final_state
conflicting_specs = r.get_conflicting_specs(tuple(final_environment_specs))
File "/home/nwani/m2/lib/python2.7/site-packages/conda/resolve.py", line 705, in get_conflicting_specs
C = r2.gen_clauses()
File "/home/nwani/m2/lib/python2.7/site-packages/conda/resolve.py", line 505, in gen_clauses
C.Require(C.Or, nkey, self.push_MatchSpec(C, ms))
File "/home/nwani/m2/lib/python2.7/site-packages/conda/resolve.py", line 477, in push_MatchSpec
m = C.from_name(self.push_MatchSpec(C, ms2))
File "/home/nwani/m2/lib/python2.7/site-packages/conda/resolve.py", line 477, in push_MatchSpec
m = C.from_name(self.push_MatchSpec(C, ms2))
...yada...
...yada...
...yada...
File "/home/nwani/m2/lib/python2.7/site-packages/conda/resolve.py", line 477, in push_MatchSpec
m = C.from_name(self.push_MatchSpec(C, ms2))
File "/home/nwani/m2/lib/python2.7/site-packages/conda/resolve.py", line 477, in push_MatchSpec
m = C.from_name(self.push_MatchSpec(C, ms2))
File "/home/nwani/m2/lib/python2.7/site-packages/conda/resolve.py", line 477, in push_MatchSpec
m = C.from_name(self.push_MatchSpec(C, ms2))
File "/home/nwani/m2/lib/python2.7/site-packages/conda/resolve.py", line 476, in push_MatchSpec
ms2 = MatchSpec(track_features=tf) if tf else MatchSpec(nm)
File "/home/nwani/m2/lib/python2.7/site-packages/conda/models/match_spec.py", line 76, in __call__
return super(MatchSpecType, cls).__call__(**kwargs)
File "/home/nwani/m2/lib/python2.7/site-packages/conda/models/match_spec.py", line 178, in __init__
self._match_components = self._build_components(**kwargs)
File "/home/nwani/m2/lib/python2.7/site-packages/conda/models/match_spec.py", line 365, in _build_components
return frozendict(_make(key, value) for key, value in iteritems(kwargs))
File "/home/nwani/m2/lib/python2.7/collections.py", line 69, in __init__
self.__update(*args, **kwds)
File "/home/nwani/m2/lib/python2.7/_abcoll.py", line 564, in update
if isinstance(other, Mapping):
File "/home/nwani/m2/lib/python2.7/abc.py", line 141, in __instancecheck__
subtype in cls._abc_negative_cache):
File "/home/nwani/m2/lib/python2.7/_weakrefset.py", line 75, in __contains__
return wr in self.data
RuntimeError: maximum recursion depth exceeded in cmp
`$ /home/nwani/m2/bin/conda install scratch -c local`
environment variables:
CIO_TEST=<not set>
CONDA_DEFAULT_ENV=base
CONDA_PREFIX=/home/nwani/m2
CONDA_PROMPT_MODIFIER=(base)
CONDA_PYTHON_EXE=/home/nwani/m2/bin/python
CONDA_ROOT=/home/nwani/m2
CONDA_SHLVL=1
PATH=/home/nwani/m2/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/
home/nwani/.local/bin:/home/nwani/bin
REQUESTS_CA_BUNDLE=<not set>
SSL_CERT_FILE=<not set>
active environment : base
active env location : /home/nwani/m2
shell level : 1
user config file : /home/nwani/.condarc
populated config files :
conda version : 4.4.9
conda-build version : 3.4.1
python version : 2.7.14.final.0
base environment : /home/nwani/m2 (writable)
channel URLs : file:///home/nwani/m2/conda-bld/linux-64
file:///home/nwani/m2/conda-bld/noarch
https://repo.continuum.io/pkgs/main/linux-64
https://repo.continuum.io/pkgs/main/noarch
https://repo.continuum.io/pkgs/free/linux-64
https://repo.continuum.io/pkgs/free/noarch
https://repo.continuum.io/pkgs/r/linux-64
https://repo.continuum.io/pkgs/r/noarch
https://repo.continuum.io/pkgs/pro/linux-64
https://repo.continuum.io/pkgs/pro/noarch
package cache : /home/nwani/m2/pkgs
/home/nwani/.conda/pkgs
envs directories : /home/nwani/m2/envs
/home/nwani/.conda/envs
platform : linux-64
user-agent : conda/4.4.9 requests/2.18.4 CPython/2.7.14 Linux/3.10.0-693.5.2.el7.x86_64 centos/7 glibc/2.17
UID:GID : 1001:1001
netrc file : None
offline mode : False
An unexpected error has occurred. Conda has prepared the above report.
If submitted, this report will be used by core maintainers to improve
future releases of conda.
Would you like conda to send this report to the core maintainers?
[y/N]: y
Upload did not complete.
Thank you for helping to improve conda.
Opt-in to always sending reports (and not see this message again)
by running
$ conda config --set report_errors true
|
RuntimeError
|
def push_MatchSpec(self, C, spec):
spec = MatchSpec(spec)
sat_name = self.to_sat_name(spec)
m = C.from_name(sat_name)
if m is not None:
# the spec has already been pushed onto the clauses stack
return sat_name
simple = spec._is_single()
nm = spec.get_exact_value("name")
tf = frozenset(
_tf
for _tf in (f.strip() for f in spec.get_exact_value("track_features") or ())
if _tf
)
if nm:
tgroup = libs = self.groups.get(nm, [])
elif tf:
assert len(tf) == 1
k = next(iter(tf))
tgroup = libs = self.trackers.get(k, [])
else:
tgroup = libs = self.index.keys()
simple = False
if not simple:
libs = [fkey for fkey in tgroup if self.match(spec, fkey)]
if len(libs) == len(tgroup):
if spec.optional:
m = True
elif not simple:
ms2 = MatchSpec(track_features=tf) if tf else MatchSpec(nm)
m = C.from_name(self.push_MatchSpec(C, ms2))
if m is None:
dists = [dist.full_name for dist in libs]
if spec.optional:
ms2 = MatchSpec(track_features=tf) if tf else MatchSpec(nm)
dists.append("!" + self.to_sat_name(ms2))
m = C.Any(dists)
C.name_var(m, sat_name)
return sat_name
|
def push_MatchSpec(self, C, spec):
spec = MatchSpec(spec)
sat_name = self.to_sat_name(spec)
m = C.from_name(sat_name)
if m is not None:
# the spec has already been pushed onto the clauses stack
return sat_name
simple = spec._is_single()
nm = spec.get_exact_value("name")
tf = spec.get_exact_value("track_features")
if nm:
tgroup = libs = self.groups.get(nm, [])
elif tf:
assert len(tf) == 1
k = next(iter(tf))
tgroup = libs = self.trackers.get(k, [])
else:
tgroup = libs = self.index.keys()
simple = False
if not simple:
libs = [fkey for fkey in tgroup if self.match(spec, fkey)]
if len(libs) == len(tgroup):
if spec.optional:
m = True
elif not simple:
ms2 = MatchSpec(track_features=tf) if tf else MatchSpec(nm)
m = C.from_name(self.push_MatchSpec(C, ms2))
if m is None:
dists = [dist.full_name for dist in libs]
if spec.optional:
ms2 = MatchSpec(track_features=tf) if tf else MatchSpec(nm)
dists.append("!" + self.to_sat_name(ms2))
m = C.Any(dists)
C.name_var(m, sat_name)
return sat_name
|
https://github.com/conda/conda/issues/6860
|
(base) [nwani@centos7-nwani scratch]$ conda install scratch -c local
Solving environment: failed
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/home/nwani/m2/lib/python2.7/site-packages/conda/exceptions.py", line 789, in __call__
return func(*args, **kwargs)
File "/home/nwani/m2/lib/python2.7/site-packages/conda/cli/main.py", line 78, in _main
exit_code = do_call(args, p)
File "/home/nwani/m2/lib/python2.7/site-packages/conda/cli/conda_argparse.py", line 77, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/home/nwani/m2/lib/python2.7/site-packages/conda/cli/main_install.py", line 11, in execute
install(args, parser, 'install')
File "/home/nwani/m2/lib/python2.7/site-packages/conda/cli/install.py", line 236, in install
force_reinstall=context.force,
File "/home/nwani/m2/lib/python2.7/site-packages/conda/core/solve.py", line 504, in solve_for_transaction
force_remove, force_reinstall)
File "/home/nwani/m2/lib/python2.7/site-packages/conda/core/solve.py", line 437, in solve_for_diff
final_precs = self.solve_final_state(deps_modifier, prune, ignore_pinned, force_remove)
File "/home/nwani/m2/lib/python2.7/site-packages/conda/core/solve.py", line 317, in solve_final_state
conflicting_specs = r.get_conflicting_specs(tuple(final_environment_specs))
File "/home/nwani/m2/lib/python2.7/site-packages/conda/resolve.py", line 705, in get_conflicting_specs
C = r2.gen_clauses()
File "/home/nwani/m2/lib/python2.7/site-packages/conda/resolve.py", line 505, in gen_clauses
C.Require(C.Or, nkey, self.push_MatchSpec(C, ms))
File "/home/nwani/m2/lib/python2.7/site-packages/conda/resolve.py", line 477, in push_MatchSpec
m = C.from_name(self.push_MatchSpec(C, ms2))
File "/home/nwani/m2/lib/python2.7/site-packages/conda/resolve.py", line 477, in push_MatchSpec
m = C.from_name(self.push_MatchSpec(C, ms2))
...yada...
...yada...
...yada...
File "/home/nwani/m2/lib/python2.7/site-packages/conda/resolve.py", line 477, in push_MatchSpec
m = C.from_name(self.push_MatchSpec(C, ms2))
File "/home/nwani/m2/lib/python2.7/site-packages/conda/resolve.py", line 477, in push_MatchSpec
m = C.from_name(self.push_MatchSpec(C, ms2))
File "/home/nwani/m2/lib/python2.7/site-packages/conda/resolve.py", line 477, in push_MatchSpec
m = C.from_name(self.push_MatchSpec(C, ms2))
File "/home/nwani/m2/lib/python2.7/site-packages/conda/resolve.py", line 476, in push_MatchSpec
ms2 = MatchSpec(track_features=tf) if tf else MatchSpec(nm)
File "/home/nwani/m2/lib/python2.7/site-packages/conda/models/match_spec.py", line 76, in __call__
return super(MatchSpecType, cls).__call__(**kwargs)
File "/home/nwani/m2/lib/python2.7/site-packages/conda/models/match_spec.py", line 178, in __init__
self._match_components = self._build_components(**kwargs)
File "/home/nwani/m2/lib/python2.7/site-packages/conda/models/match_spec.py", line 365, in _build_components
return frozendict(_make(key, value) for key, value in iteritems(kwargs))
File "/home/nwani/m2/lib/python2.7/collections.py", line 69, in __init__
self.__update(*args, **kwds)
File "/home/nwani/m2/lib/python2.7/_abcoll.py", line 564, in update
if isinstance(other, Mapping):
File "/home/nwani/m2/lib/python2.7/abc.py", line 141, in __instancecheck__
subtype in cls._abc_negative_cache):
File "/home/nwani/m2/lib/python2.7/_weakrefset.py", line 75, in __contains__
return wr in self.data
RuntimeError: maximum recursion depth exceeded in cmp
`$ /home/nwani/m2/bin/conda install scratch -c local`
environment variables:
CIO_TEST=<not set>
CONDA_DEFAULT_ENV=base
CONDA_PREFIX=/home/nwani/m2
CONDA_PROMPT_MODIFIER=(base)
CONDA_PYTHON_EXE=/home/nwani/m2/bin/python
CONDA_ROOT=/home/nwani/m2
CONDA_SHLVL=1
PATH=/home/nwani/m2/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin:/
home/nwani/.local/bin:/home/nwani/bin
REQUESTS_CA_BUNDLE=<not set>
SSL_CERT_FILE=<not set>
active environment : base
active env location : /home/nwani/m2
shell level : 1
user config file : /home/nwani/.condarc
populated config files :
conda version : 4.4.9
conda-build version : 3.4.1
python version : 2.7.14.final.0
base environment : /home/nwani/m2 (writable)
channel URLs : file:///home/nwani/m2/conda-bld/linux-64
file:///home/nwani/m2/conda-bld/noarch
https://repo.continuum.io/pkgs/main/linux-64
https://repo.continuum.io/pkgs/main/noarch
https://repo.continuum.io/pkgs/free/linux-64
https://repo.continuum.io/pkgs/free/noarch
https://repo.continuum.io/pkgs/r/linux-64
https://repo.continuum.io/pkgs/r/noarch
https://repo.continuum.io/pkgs/pro/linux-64
https://repo.continuum.io/pkgs/pro/noarch
package cache : /home/nwani/m2/pkgs
/home/nwani/.conda/pkgs
envs directories : /home/nwani/m2/envs
/home/nwani/.conda/envs
platform : linux-64
user-agent : conda/4.4.9 requests/2.18.4 CPython/2.7.14 Linux/3.10.0-693.5.2.el7.x86_64 centos/7 glibc/2.17
UID:GID : 1001:1001
netrc file : None
offline mode : False
An unexpected error has occurred. Conda has prepared the above report.
If submitted, this report will be used by core maintainers to improve
future releases of conda.
Would you like conda to send this report to the core maintainers?
[y/N]: y
Upload did not complete.
Thank you for helping to improve conda.
Opt-in to always sending reports (and not see this message again)
by running
$ conda config --set report_errors true
|
RuntimeError
|
def __str__(self):
try:
return text_type(self.message % self._kwargs)
except:
debug_message = "\n".join(
(
"class: " + self.__class__.__name__,
"message:",
self.message,
"kwargs:",
text_type(self._kwargs),
"",
)
)
sys.stderr.write(debug_message)
raise
|
def __str__(self):
try:
return text_type(self.message % self._kwargs)
except TypeError:
# TypeError: not enough arguments for format string
debug_message = "\n".join(
(
"class: " + self.__class__.__name__,
"message:",
self.message,
"kwargs:",
text_type(self._kwargs),
)
)
sys.stderr.write(debug_message)
raise
|
https://github.com/conda/conda/issues/6899
|
$ source ~/anaconda/bin/activate
Traceback (most recent call last):
File "/home/ondrej/anaconda/lib/python2.7/site-packages/conda/gateways/logging.py", line 64, in emit
msg = self.format(record)
File "/home/ondrej/anaconda/lib/python2.7/logging/__init__.py", line 734, in format
return fmt.format(record)
File "/home/ondrej/anaconda/lib/python2.7/logging/__init__.py", line 465, in format
record.message = record.getMessage()
File "/home/ondrej/anaconda/lib/python2.7/logging/__init__.py", line 329, in getMessage
msg = msg % self.args
File "/home/ondrej/anaconda/lib/python2.7/site-packages/conda/__init__.py", line 43, in __repr__
return '%s: %s' % (self.__class__.__name__, text_type(self))
File "/home/ondrej/anaconda/lib/python2.7/site-packages/conda/__init__.py", line 47, in __str__
return text_type(self.message % self._kwargs)
ValueError: unsupported format character '{' (0x7b) at index 458
Logged from file exceptions.py, line 770
$ echo $ZSH_VERSION
5.3.1
|
ValueError
|
def dump_map(self):
result = dict((k, v) for k, v in vars(self).items() if not k.startswith("_"))
result.update(
exception_type=text_type(type(self)),
exception_name=self.__class__.__name__,
message=text_type(self),
error=repr(self),
caused_by=repr(self._caused_by),
**self._kwargs,
)
return result
|
def dump_map(self):
result = dict((k, v) for k, v in iteritems(vars(self)) if not k.startswith("_"))
result.update(
exception_type=text_type(type(self)),
exception_name=self.__class__.__name__,
message=text_type(self),
error=repr(self),
caused_by=repr(self._caused_by),
**self._kwargs,
)
return result
|
https://github.com/conda/conda/issues/6899
|
$ source ~/anaconda/bin/activate
Traceback (most recent call last):
File "/home/ondrej/anaconda/lib/python2.7/site-packages/conda/gateways/logging.py", line 64, in emit
msg = self.format(record)
File "/home/ondrej/anaconda/lib/python2.7/logging/__init__.py", line 734, in format
return fmt.format(record)
File "/home/ondrej/anaconda/lib/python2.7/logging/__init__.py", line 465, in format
record.message = record.getMessage()
File "/home/ondrej/anaconda/lib/python2.7/logging/__init__.py", line 329, in getMessage
msg = msg % self.args
File "/home/ondrej/anaconda/lib/python2.7/site-packages/conda/__init__.py", line 43, in __repr__
return '%s: %s' % (self.__class__.__name__, text_type(self))
File "/home/ondrej/anaconda/lib/python2.7/site-packages/conda/__init__.py", line 47, in __str__
return text_type(self.message % self._kwargs)
ValueError: unsupported format character '{' (0x7b) at index 458
Logged from file exceptions.py, line 770
$ echo $ZSH_VERSION
5.3.1
|
ValueError
|
def _finalize(self, commands, ext):
commands = concatv(commands, ("",)) # add terminating newline
if ext is None:
output = self.command_join.join(commands)
if PY2:
return ensure_binary(output)
return output
elif ext:
with NamedTemporaryFile("w+b", suffix=ext, delete=False) as tf:
# the default mode is 'w+b', and universal new lines don't work in that mode
# command_join should account for that
tf.write(ensure_binary(self.command_join.join(commands)))
return tf.name
else:
raise NotImplementedError()
|
def _finalize(self, commands, ext):
commands = concatv(commands, ("",)) # add terminating newline
if ext is None:
return self.command_join.join(commands)
elif ext:
with NamedTemporaryFile("w+b", suffix=ext, delete=False) as tf:
# the default mode is 'w+b', and universal new lines don't work in that mode
# command_join should account for that
tf.write(ensure_binary(self.command_join.join(commands)))
return tf.name
else:
raise NotImplementedError()
|
https://github.com/conda/conda/issues/6899
|
$ source ~/anaconda/bin/activate
Traceback (most recent call last):
File "/home/ondrej/anaconda/lib/python2.7/site-packages/conda/gateways/logging.py", line 64, in emit
msg = self.format(record)
File "/home/ondrej/anaconda/lib/python2.7/logging/__init__.py", line 734, in format
return fmt.format(record)
File "/home/ondrej/anaconda/lib/python2.7/logging/__init__.py", line 465, in format
record.message = record.getMessage()
File "/home/ondrej/anaconda/lib/python2.7/logging/__init__.py", line 329, in getMessage
msg = msg % self.args
File "/home/ondrej/anaconda/lib/python2.7/site-packages/conda/__init__.py", line 43, in __repr__
return '%s: %s' % (self.__class__.__name__, text_type(self))
File "/home/ondrej/anaconda/lib/python2.7/site-packages/conda/__init__.py", line 47, in __str__
return text_type(self.message % self._kwargs)
ValueError: unsupported format character '{' (0x7b) at index 458
Logged from file exceptions.py, line 770
$ echo $ZSH_VERSION
5.3.1
|
ValueError
|
def stdout_json(d):
print(json_dump(d))
|
def stdout_json(d):
import json
from .._vendor.auxlib.entity import EntityEncoder
json.dump(d, sys.stdout, indent=2, sort_keys=True, cls=EntityEncoder)
sys.stdout.write("\n")
|
https://github.com/conda/conda/issues/6899
|
$ source ~/anaconda/bin/activate
Traceback (most recent call last):
File "/home/ondrej/anaconda/lib/python2.7/site-packages/conda/gateways/logging.py", line 64, in emit
msg = self.format(record)
File "/home/ondrej/anaconda/lib/python2.7/logging/__init__.py", line 734, in format
return fmt.format(record)
File "/home/ondrej/anaconda/lib/python2.7/logging/__init__.py", line 465, in format
record.message = record.getMessage()
File "/home/ondrej/anaconda/lib/python2.7/logging/__init__.py", line 329, in getMessage
msg = msg % self.args
File "/home/ondrej/anaconda/lib/python2.7/site-packages/conda/__init__.py", line 43, in __repr__
return '%s: %s' % (self.__class__.__name__, text_type(self))
File "/home/ondrej/anaconda/lib/python2.7/site-packages/conda/__init__.py", line 47, in __str__
return text_type(self.message % self._kwargs)
ValueError: unsupported format character '{' (0x7b) at index 458
Logged from file exceptions.py, line 770
$ echo $ZSH_VERSION
5.3.1
|
ValueError
|
def main(*args):
# conda.common.compat contains only stdlib imports
from ..common.compat import ensure_text_type # , init_std_stream_encoding
# init_std_stream_encoding()
if not args:
args = sys.argv
args = tuple(ensure_text_type(s) for s in args)
if len(args) > 1:
try:
argv1 = args[1].strip()
if argv1.startswith("shell."):
from ..activate import main as activator_main
return activator_main()
elif argv1.startswith(".."):
import conda.cli.activate as activate
activate.main()
return
elif argv1 in ("activate", "deactivate"):
from ..exceptions import CommandNotFoundError
raise CommandNotFoundError(argv1)
except Exception as e:
_, exc_val, exc_tb = sys.exc_info()
init_loggers()
from ..exceptions import ExceptionHandler
return ExceptionHandler().handle_exception(exc_val, exc_tb)
from ..exceptions import conda_exception_handler
return conda_exception_handler(_main, *args)
|
def main(*args):
if not args:
args = sys.argv
args = tuple(_ensure_text_type(s) for s in args)
if len(args) > 1:
try:
argv1 = args[1].strip()
if argv1.startswith("shell."):
from ..activate import main as activator_main
return activator_main()
elif argv1.startswith(".."):
import conda.cli.activate as activate
activate.main()
return
elif argv1 in ("activate", "deactivate"):
from ..exceptions import CommandNotFoundError
raise CommandNotFoundError(argv1)
except Exception as e:
_, exc_val, exc_tb = sys.exc_info()
init_loggers()
from ..exceptions import ExceptionHandler
return ExceptionHandler().handle_exception(exc_val, exc_tb)
from ..exceptions import conda_exception_handler
return conda_exception_handler(_main, *args)
|
https://github.com/conda/conda/issues/6899
|
$ source ~/anaconda/bin/activate
Traceback (most recent call last):
File "/home/ondrej/anaconda/lib/python2.7/site-packages/conda/gateways/logging.py", line 64, in emit
msg = self.format(record)
File "/home/ondrej/anaconda/lib/python2.7/logging/__init__.py", line 734, in format
return fmt.format(record)
File "/home/ondrej/anaconda/lib/python2.7/logging/__init__.py", line 465, in format
record.message = record.getMessage()
File "/home/ondrej/anaconda/lib/python2.7/logging/__init__.py", line 329, in getMessage
msg = msg % self.args
File "/home/ondrej/anaconda/lib/python2.7/site-packages/conda/__init__.py", line 43, in __repr__
return '%s: %s' % (self.__class__.__name__, text_type(self))
File "/home/ondrej/anaconda/lib/python2.7/site-packages/conda/__init__.py", line 47, in __str__
return text_type(self.message % self._kwargs)
ValueError: unsupported format character '{' (0x7b) at index 458
Logged from file exceptions.py, line 770
$ echo $ZSH_VERSION
5.3.1
|
ValueError
|
def json_dump(object):
return ensure_text_type(
json.dumps(
object, indent=2, sort_keys=True, separators=(",", ": "), cls=EntityEncoder
)
)
|
def json_dump(object):
return json.dumps(
object, indent=2, sort_keys=True, separators=(",", ": "), cls=EntityEncoder
)
|
https://github.com/conda/conda/issues/6899
|
$ source ~/anaconda/bin/activate
Traceback (most recent call last):
File "/home/ondrej/anaconda/lib/python2.7/site-packages/conda/gateways/logging.py", line 64, in emit
msg = self.format(record)
File "/home/ondrej/anaconda/lib/python2.7/logging/__init__.py", line 734, in format
return fmt.format(record)
File "/home/ondrej/anaconda/lib/python2.7/logging/__init__.py", line 465, in format
record.message = record.getMessage()
File "/home/ondrej/anaconda/lib/python2.7/logging/__init__.py", line 329, in getMessage
msg = msg % self.args
File "/home/ondrej/anaconda/lib/python2.7/site-packages/conda/__init__.py", line 43, in __repr__
return '%s: %s' % (self.__class__.__name__, text_type(self))
File "/home/ondrej/anaconda/lib/python2.7/site-packages/conda/__init__.py", line 47, in __str__
return text_type(self.message % self._kwargs)
ValueError: unsupported format character '{' (0x7b) at index 458
Logged from file exceptions.py, line 770
$ echo $ZSH_VERSION
5.3.1
|
ValueError
|
def rename(source_path, destination_path, force=False):
if lexists(destination_path) and force:
rm_rf(destination_path)
if lexists(source_path):
log.trace("renaming %s => %s", source_path, destination_path)
try:
os_rename(source_path, destination_path)
except EnvironmentError as e:
if e.errno in (EINVAL, EXDEV):
# https://github.com/conda/conda/issues/6811
# https://github.com/conda/conda/issues/6711
log.trace(
"Could not rename %s => %s due to errno [%s]. Falling back"
" to copy/unlink",
source_path,
destination_path,
e.errno,
)
# https://github.com/moby/moby/issues/25409#issuecomment-238537855
# shutil.move() falls back to copy+unlink
move(source_path, destination_path)
else:
raise
else:
log.trace("cannot rename; source path does not exist '%s'", source_path)
|
def rename(source_path, destination_path, force=False):
if lexists(destination_path) and force:
rm_rf(destination_path)
if lexists(source_path):
log.trace("renaming %s => %s", source_path, destination_path)
try:
os_rename(source_path, destination_path)
except EnvironmentError as e:
if e.errno in (EINVAL, EXDEV):
# see https://github.com/conda/conda/issues/6711
log.trace(
"Could not rename do to errno [%s]. Falling back to copy/remove.",
e.errno,
)
_copy_then_remove(source_path, destination_path)
else:
raise
else:
log.trace("cannot rename; source path does not exist '%s'", source_path)
|
https://github.com/conda/conda/issues/6811
|
<<HTTPS 200 OK
< Accept-Ranges: bytes
< Content-Disposition: attachment; filename="six-1.11.0-py35h423b573_1.tar.bz2"; filename*=UTF-8''six-1.11.0-py35h423b573_1.tar.bz2
< Content-Type: application/x-tar
< Date: Mon, 29 Jan 2018 11:43:42 GMT
< ETag: "576d38abfcb7ceb3b323b802b1fec665"
< Last-Modified: Sat, 21 Oct 2017 18:55:29 GMT
< Server: AmazonS3
< x-amz-id-2: IGiKj9lk7QKmYRYyZCVaUEM4Ax19T3slC8e1+ZVXTR3gT5Hg9UNd/8CxoS9yDWZt5PdfORpg9mo=
< x-amz-request-id: 8A668C11FD79A607
< Content-Length: 21870
< Elapsed: 00:00.106578
TRACE conda.core.path_actions:execute(1238): extracting /opt/conda/pkgs/six-1.11.0-py35h423b573_1.tar.bz2 => /opt/conda/pkgs/six-1.11.0-py35h423b573_1
TRACE conda.gateways.disk.update:rename(60): renaming /opt/conda/pkgs/six-1.11.0-py35h423b573_1 => /opt/conda/pkgs/six-1.11.0-py35h423b573_1.c~
DEBUG conda.gateways.disk.create:extract_tarball(132): extracting /opt/conda/pkgs/six-1.11.0-py35h423b573_1.tar.bz2
to /opt/conda/pkgs/six-1.11.0-py35h423b573_1
TRACE conda.gateways.disk.create:write_as_json_to_file(61): writing json to file /opt/conda/pkgs/six-1.11.0-py35h423b573_1/info/repodata_record.json
TRACE conda.gateways.disk.create:write_as_json_to_file(61): writing json to file /opt/conda/pkgs/six-1.11.0-py35h423b573_1/info/repodata_record.json
TRACE conda.gateways.disk.delete:rm_rf(29): rm_rf /opt/conda/pkgs/six-1.11.0-py35h423b573_1.tar.bz2.c~
TRACE conda.gateways.disk.delete:rm_rf(29): rm_rf /opt/conda/pkgs/six-1.11.0-py35h423b573_1.c~
DEBUG conda.common.signals:signal_handler(56): de-registering handler for Signals.SIGIOT
DEBUG conda.common.signals:signal_handler(56): de-registering handler for Signals.SIGINT
DEBUG conda.common.signals:signal_handler(56): de-registering handler for Signals.SIGTERM
DEBUG conda.common.signals:signal_handler(56): de-registering handler for Signals.SIGQUIT
Traceback (most recent call last):
File "/opt/conda/lib/python3.5/site-packages/conda/exceptions.py", line 772, in __call__
return func(*args, **kwargs)
File "/opt/conda/lib/python3.5/site-packages/conda_env/cli/main.py", line 74, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/opt/conda/lib/python3.5/site-packages/conda_env/cli/main_update.py", line 107, in execute
installer.install(prefix, specs, args, env)
File "/opt/conda/lib/python3.5/site-packages/conda_env/installers/conda.py", line 38, in install
pfe.execute()
File "/opt/conda/lib/python3.5/site-packages/conda/core/package_cache.py", line 590, in execute
raise CondaMultiError(exceptions)
conda.CondaMultiError: [Errno 21] Is a directory: '/opt/conda/pkgs/ca-certificates-2017.08.26-h1d4fec5_0'
[Errno 21] Is a directory: '/opt/conda/pkgs/libedit-3.1-heed3624_0'
|
conda.CondaMultiError
|
def list_parameters(self):
UNLISTED_PARAMETERS = (
"bld_path",
"conda_build",
"croot",
"debug",
"default_python",
"dry_run",
"enable_private_envs",
"error_upload_url", # should remain undocumented
"force_32bit",
"ignore_pinned",
"migrated_custom_channels",
"only_dependencies",
"prune",
"root_prefix",
"subdir",
"subdirs",
# https://conda.io/docs/config.html#disable-updating-of-dependencies-update-dependencies # NOQA
# I don't think this documentation is correct any longer. # NOQA
"target_prefix_override", # used to override prefix rewriting, for e.g. building docker containers or RPMs # NOQA
"update_dependencies",
"use_local",
)
return tuple(
p
for p in super(Context, self).list_parameters()
if p not in UNLISTED_PARAMETERS
)
|
def list_parameters(self):
UNLISTED_PARAMETERS = (
"bld_path",
"conda_build",
"croot",
"debug",
"default_python",
"dry_run",
"enable_private_envs",
"error_upload_url", # should remain undocumented
"force_32bit",
"ignore_pinned",
"max_shlvl",
"migrated_custom_channels",
"only_dependencies",
"prune",
"root_prefix",
"subdir",
"subdirs",
# https://conda.io/docs/config.html#disable-updating-of-dependencies-update-dependencies # NOQA
# I don't think this documentation is correct any longer. # NOQA
"target_prefix_override", # used to override prefix rewriting, for e.g. building docker containers or RPMs # NOQA
"update_dependencies",
"use_local",
)
return tuple(
p
for p in super(Context, self).list_parameters()
if p not in UNLISTED_PARAMETERS
)
|
https://github.com/conda/conda/issues/6882
|
% conda create -n no-ipython humidity -c davidmertz -y # Silly example package
[... creating ...]
% conda activate no-ipython
(no-ipython) % ipython
Python 3.6.4 |Anaconda custom (64-bit)| (default, Jan 16 2018, 12:04:33)
Type 'copyright', 'credits' or 'license' for more information
IPython 6.1.0 -- An enhanced Interactive Python. Type '?' for help.
In [1]: import humidity
---------------------------------------------------------------------------
ModuleNotFoundError Traceback (most recent call last)
<ipython-input-1-5cdf29aced62> in <module>()
----> 1 import humidity
ModuleNotFoundError: No module named 'humidity'
In [2]:
Do you really want to exit ([y]/n)? y
(no-ipython) % which ipython
/Users/dmertz/anaconda3/bin/ipython
(no-ipython) % conda install ipython -y
[... installing ...]
(no-ipython) % which ipython
/Users/dmertz/anaconda3/envs/no-ipython/bin/ipython
(no-ipython) % ipython
Python 3.6.4 |Anaconda, Inc.| (default, Jan 16 2018, 12:04:33)
Type 'copyright', 'credits' or 'license' for more information
IPython 6.2.1 -- An enhanced Interactive Python. Type '?' for help.
In [1]: import humidity
In [2]:
|
ModuleNotFoundError
|
def get_help_dict():
# this is a function so that most of the time it's not evaluated and loaded into memory
return frozendict(
{
"add_anaconda_token": dals("""
In conjunction with the anaconda command-line client (installed with
`conda install anaconda-client`), and following logging into an Anaconda
Server API site using `anaconda login`, automatically apply a matching
private token to enable access to private packages and channels.
"""),
"add_pip_as_python_dependency": dals("""
Add pip, wheel and setuptools as dependencies of python. This ensures pip,
wheel and setuptools will always be installed any time python is installed.
"""),
"aggressive_update_packages": dals("""
A list of packages that, if installed, are always updated to the latest possible
version.
"""),
"allow_non_channel_urls": dals("""
Warn, but do not fail, when conda detects a channel url is not a valid channel.
"""),
"allow_softlinks": dals("""
When allow_softlinks is True, conda uses hard-links when possible, and soft-links
(symlinks) when hard-links are not possible, such as when installing on a
different filesystem than the one that the package cache is on. When
allow_softlinks is False, conda still uses hard-links when possible, but when it
is not possible, conda copies files. Individual packages can override
this setting, specifying that certain files should never be soft-linked (see the
no_link option in the build recipe documentation).
"""),
"always_copy": dals("""
Register a preference that files be copied into a prefix during install rather
than hard-linked.
"""),
"always_softlink": dals("""
Register a preference that files be soft-linked (symlinked) into a prefix during
install rather than hard-linked. The link source is the 'pkgs_dir' package cache
from where the package is being linked. WARNING: Using this option can result in
corruption of long-lived conda environments. Package caches are *caches*, which
means there is some churn and invalidation. With this option, the contents of
environments can be switched out (or erased) via operations on other environments.
"""),
"always_yes": dals("""
Automatically choose the 'yes' option whenever asked to proceed with a conda
operation, such as when running `conda install`.
"""),
"anaconda_upload": dals("""
Automatically upload packages built with conda build to anaconda.org.
"""),
"auto_update_conda": dals("""
Automatically update conda when a newer or higher priority version is detected.
"""),
"changeps1": dals("""
When using activate, change the command prompt ($PS1) to include the
activated environment.
"""),
"channel_alias": dals("""
The prepended url location to associate with channel names.
"""),
"channel_priority": dals("""
When True, the solver is instructed to prefer channel order over package
version. When False, the solver is instructed to give package version
preference over channel priority.
"""),
"channels": dals("""
The list of conda channels to include for relevant operations.
"""),
"client_ssl_cert": dals("""
A path to a single file containing a private key and certificate (e.g. .pem
file). Alternately, use client_ssl_cert_key in conjuction with client_ssl_cert
for individual files.
"""),
"client_ssl_cert_key": dals("""
Used in conjunction with client_ssl_cert for a matching key file.
"""),
"clobber": dals("""
Allow clobbering of overlapping file paths within packages, and suppress
related warnings. Overrides the path_conflict configuration value when
set to 'warn' or 'prevent'.
"""),
"create_default_packages": dals("""
Packages that are by default added to a newly created environments.
"""), # TODO: This is a bad parameter name. Consider an alternate.
"custom_channels": dals("""
A map of key-value pairs where the key is a channel name and the value is
a channel location. Channels defined here override the default
'channel_alias' value. The channel name (key) is not included in the channel
location (value). For example, to override the location of the 'conda-forge'
channel where the url to repodata is
https://anaconda-repo.dev/packages/conda-forge/linux-64/repodata.json, add an
entry 'conda-forge: https://anaconda-repo.dev/packages'.
"""),
"custom_multichannels": dals("""
A multichannel is a metachannel composed of multiple channels. The two reserved
multichannels are 'defaults' and 'local'. The 'defaults' multichannel is
customized using the 'default_channels' parameter. The 'local'
multichannel is a list of file:// channel locations where conda-build stashes
successfully-built packages. Other multichannels can be defined with
custom_multichannels, where the key is the multichannel name and the value is
a list of channel names and/or channel urls.
"""),
"default_channels": dals("""
The list of channel names and/or urls used for the 'defaults' multichannel.
"""),
# 'default_python': dals("""
# specifies the default major & minor version of Python to be used when
# building packages with conda-build. Also used to determine the major
# version of Python (2/3) to be used in new environments. Defaults to
# the version used by conda itself.
# """),
"disallow": dals("""
Package specifications to disallow installing. The default is to allow
all packages.
"""),
"download_only": dals("""
Solve an environment and ensure package caches are populated, but exit
prior to unlinking and linking packages into the prefix
"""),
"envs_dirs": dals("""
The list of directories to search for named environments. When creating a new
named environment, the environment will be placed in the first writable
location.
"""),
"force": dals("""
Override any of conda's objections and safeguards for installing packages and
potentially breaking environments. Also re-installs the package, even if the
package is already installed. Implies --no-deps.
"""),
# 'force_32bit': dals("""
# CONDA_FORCE_32BIT should only be used when running conda-build (in order
# to build 32-bit packages on a 64-bit system). We don't want to mention it
# in the documentation, because it can mess up a lot of things.
# """),
"json": dals("""
Ensure all output written to stdout is structured json.
"""),
"local_repodata_ttl": dals("""
For a value of False or 0, always fetch remote repodata (HTTP 304 responses
respected). For a value of True or 1, respect the HTTP Cache-Control max-age
header. Any other positive integer values is the number of seconds to locally
cache repodata before checking the remote server for an update.
"""),
"max_shlvl": dals("""
The maximum number of stacked active conda environments.
"""),
"migrated_channel_aliases": dals("""
A list of previously-used channel_alias values, useful for example when switching
between different Anaconda Repository instances.
"""),
"no_dependencies": dals("""
Do not install, update, remove, or change dependencies. This WILL lead to broken
environments and inconsistent behavior. Use at your own risk.
"""),
"non_admin_enabled": dals("""
Allows completion of conda's create, install, update, and remove operations, for
non-privileged (non-root or non-administrator) users.
"""),
"notify_outdated_conda": dals("""
Notify if a newer version of conda is detected during a create, install, update,
or remove operation.
"""),
"offline": dals("""
Restrict conda to cached download content and file:// based urls.
"""),
"override_channels_enabled": dals("""
Permit use of the --overide-channels command-line flag.
"""),
"path_conflict": dals("""
The method by which conda handle's conflicting/overlapping paths during a
create, install, or update operation. The value must be one of 'clobber',
'warn', or 'prevent'. The '--clobber' command-line flag or clobber
configuration parameter overrides path_conflict set to 'prevent'.
"""),
"pinned_packages": dals("""
A list of package specs to pin for every environment resolution.
This parameter is in BETA, and its behavior may change in a future release.
"""),
"pkgs_dirs": dals("""
The list of directories where locally-available packages are linked from at
install time. Packages not locally available are downloaded and extracted
into the first writable directory.
"""),
"proxy_servers": dals("""
A mapping to enable proxy settings. Keys can be either (1) a scheme://hostname
form, which will match any request to the given scheme and exact hostname, or
(2) just a scheme, which will match requests to that scheme. Values are are
the actual proxy server, and are of the form
'scheme://[user:password@]host[:port]'. The optional 'user:password' inclusion
enables HTTP Basic Auth with your proxy.
"""),
"quiet": dals("""
Disable progress bar display and other output.
"""),
"remote_connect_timeout_secs": dals("""
The number seconds conda will wait for your client to establish a connection
to a remote url resource.
"""),
"remote_max_retries": dals("""
The maximum number of retries each HTTP connection should attempt.
"""),
"remote_read_timeout_secs": dals("""
Once conda has connected to a remote resource and sent an HTTP request, the
read timeout is the number of seconds conda will wait for the server to send
a response.
"""),
"report_errors": dals("""
Opt in, or opt out, of automatic error reporting to core maintainers. Error
reports are anonymous, with only the error stack trace and information given
by `conda info` being sent.
"""),
"rollback_enabled": dals("""
Should any error occur during an unlink/link transaction, revert any disk
mutations made to that point in the transaction.
"""),
"safety_checks": dals("""
Enforce available safety guarantees during package installation.
The value must be one of 'enabled', 'warn', or 'disabled'.
"""),
"shortcuts": dals("""
Allow packages to create OS-specific shortcuts (e.g. in the Windows Start
Menu) at install time.
"""),
"show_channel_urls": dals("""
Show channel URLs when displaying what is going to be downloaded.
"""),
"ssl_verify": dals("""
Conda verifies SSL certificates for HTTPS requests, just like a web
browser. By default, SSL verification is enabled, and conda operations will
fail if a required url's certificate cannot be verified. Setting ssl_verify to
False disables certification verificaiton. The value for ssl_verify can also
be (1) a path to a CA bundle file, or (2) a path to a directory containing
certificates of trusted CA.
"""),
"track_features": dals("""
A list of features that are tracked by default. An entry here is similar to
adding an entry to the create_default_packages list.
"""),
"use_index_cache": dals("""
Use cache of channel index files, even if it has expired.
"""),
"use_pip": dals("""
Include non-conda-installed python packages with conda list. This does not
affect any conda command or functionality other than the output of the
command conda list.
"""),
"verbosity": dals("""
Sets output log level. 0 is warn. 1 is info. 2 is debug. 3 is trace.
"""),
"whitelist_channels": dals("""
The exclusive list of channels allowed to be used on the system. Use of any
other channels will result in an error. If conda-build channels are to be
allowed, along with the --use-local command line flag, be sure to include the
'local' channel in the list. If the list is empty or left undefined, no
channel exclusions will be enforced.
"""),
}
)
|
def get_help_dict():
# this is a function so that most of the time it's not evaluated and loaded into memory
return frozendict(
{
"add_anaconda_token": dals("""
In conjunction with the anaconda command-line client (installed with
`conda install anaconda-client`), and following logging into an Anaconda
Server API site using `anaconda login`, automatically apply a matching
private token to enable access to private packages and channels.
"""),
"add_pip_as_python_dependency": dals("""
Add pip, wheel and setuptools as dependencies of python. This ensures pip,
wheel and setuptools will always be installed any time python is installed.
"""),
"aggressive_update_packages": dals("""
A list of packages that, if installed, are always updated to the latest possible
version.
"""),
"allow_non_channel_urls": dals("""
Warn, but do not fail, when conda detects a channel url is not a valid channel.
"""),
"allow_softlinks": dals("""
When allow_softlinks is True, conda uses hard-links when possible, and soft-links
(symlinks) when hard-links are not possible, such as when installing on a
different filesystem than the one that the package cache is on. When
allow_softlinks is False, conda still uses hard-links when possible, but when it
is not possible, conda copies files. Individual packages can override
this setting, specifying that certain files should never be soft-linked (see the
no_link option in the build recipe documentation).
"""),
"always_copy": dals("""
Register a preference that files be copied into a prefix during install rather
than hard-linked.
"""),
"always_softlink": dals("""
Register a preference that files be soft-linked (symlinked) into a prefix during
install rather than hard-linked. The link source is the 'pkgs_dir' package cache
from where the package is being linked. WARNING: Using this option can result in
corruption of long-lived conda environments. Package caches are *caches*, which
means there is some churn and invalidation. With this option, the contents of
environments can be switched out (or erased) via operations on other environments.
"""),
"always_yes": dals("""
Automatically choose the 'yes' option whenever asked to proceed with a conda
operation, such as when running `conda install`.
"""),
"anaconda_upload": dals("""
Automatically upload packages built with conda build to anaconda.org.
"""),
"auto_update_conda": dals("""
Automatically update conda when a newer or higher priority version is detected.
"""),
"changeps1": dals("""
When using activate, change the command prompt ($PS1) to include the
activated environment.
"""),
"channel_alias": dals("""
The prepended url location to associate with channel names.
"""),
"channel_priority": dals("""
When True, the solver is instructed to prefer channel order over package
version. When False, the solver is instructed to give package version
preference over channel priority.
"""),
"channels": dals("""
The list of conda channels to include for relevant operations.
"""),
"client_ssl_cert": dals("""
A path to a single file containing a private key and certificate (e.g. .pem
file). Alternately, use client_ssl_cert_key in conjuction with client_ssl_cert
for individual files.
"""),
"client_ssl_cert_key": dals("""
Used in conjunction with client_ssl_cert for a matching key file.
"""),
"clobber": dals("""
Allow clobbering of overlapping file paths within packages, and suppress
related warnings. Overrides the path_conflict configuration value when
set to 'warn' or 'prevent'.
"""),
"create_default_packages": dals("""
Packages that are by default added to a newly created environments.
"""), # TODO: This is a bad parameter name. Consider an alternate.
"custom_channels": dals("""
A map of key-value pairs where the key is a channel name and the value is
a channel location. Channels defined here override the default
'channel_alias' value. The channel name (key) is not included in the channel
location (value). For example, to override the location of the 'conda-forge'
channel where the url to repodata is
https://anaconda-repo.dev/packages/conda-forge/linux-64/repodata.json, add an
entry 'conda-forge: https://anaconda-repo.dev/packages'.
"""),
"custom_multichannels": dals("""
A multichannel is a metachannel composed of multiple channels. The two reserved
multichannels are 'defaults' and 'local'. The 'defaults' multichannel is
customized using the 'default_channels' parameter. The 'local'
multichannel is a list of file:// channel locations where conda-build stashes
successfully-built packages. Other multichannels can be defined with
custom_multichannels, where the key is the multichannel name and the value is
a list of channel names and/or channel urls.
"""),
"default_channels": dals("""
The list of channel names and/or urls used for the 'defaults' multichannel.
"""),
# 'default_python': dals("""
# specifies the default major & minor version of Python to be used when
# building packages with conda-build. Also used to determine the major
# version of Python (2/3) to be used in new environments. Defaults to
# the version used by conda itself.
# """),
"disallow": dals("""
Package specifications to disallow installing. The default is to allow
all packages.
"""),
"download_only": dals("""
Solve an environment and ensure package caches are populated, but exit
prior to unlinking and linking packages into the prefix
"""),
"envs_dirs": dals("""
The list of directories to search for named environments. When creating a new
named environment, the environment will be placed in the first writable
location.
"""),
"force": dals("""
Override any of conda's objections and safeguards for installing packages and
potentially breaking environments. Also re-installs the package, even if the
package is already installed. Implies --no-deps.
"""),
# 'force_32bit': dals("""
# CONDA_FORCE_32BIT should only be used when running conda-build (in order
# to build 32-bit packages on a 64-bit system). We don't want to mention it
# in the documentation, because it can mess up a lot of things.
# """),
"json": dals("""
Ensure all output written to stdout is structured json.
"""),
"local_repodata_ttl": dals("""
For a value of False or 0, always fetch remote repodata (HTTP 304 responses
respected). For a value of True or 1, respect the HTTP Cache-Control max-age
header. Any other positive integer values is the number of seconds to locally
cache repodata before checking the remote server for an update.
"""),
"migrated_channel_aliases": dals("""
A list of previously-used channel_alias values, useful for example when switching
between different Anaconda Repository instances.
"""),
"no_dependencies": dals("""
Do not install, update, remove, or change dependencies. This WILL lead to broken
environments and inconsistent behavior. Use at your own risk.
"""),
"non_admin_enabled": dals("""
Allows completion of conda's create, install, update, and remove operations, for
non-privileged (non-root or non-administrator) users.
"""),
"notify_outdated_conda": dals("""
Notify if a newer version of conda is detected during a create, install, update,
or remove operation.
"""),
"offline": dals("""
Restrict conda to cached download content and file:// based urls.
"""),
"override_channels_enabled": dals("""
Permit use of the --overide-channels command-line flag.
"""),
"path_conflict": dals("""
The method by which conda handle's conflicting/overlapping paths during a
create, install, or update operation. The value must be one of 'clobber',
'warn', or 'prevent'. The '--clobber' command-line flag or clobber
configuration parameter overrides path_conflict set to 'prevent'.
"""),
"pinned_packages": dals("""
A list of package specs to pin for every environment resolution.
This parameter is in BETA, and its behavior may change in a future release.
"""),
"pkgs_dirs": dals("""
The list of directories where locally-available packages are linked from at
install time. Packages not locally available are downloaded and extracted
into the first writable directory.
"""),
"proxy_servers": dals("""
A mapping to enable proxy settings. Keys can be either (1) a scheme://hostname
form, which will match any request to the given scheme and exact hostname, or
(2) just a scheme, which will match requests to that scheme. Values are are
the actual proxy server, and are of the form
'scheme://[user:password@]host[:port]'. The optional 'user:password' inclusion
enables HTTP Basic Auth with your proxy.
"""),
"quiet": dals("""
Disable progress bar display and other output.
"""),
"remote_connect_timeout_secs": dals("""
The number seconds conda will wait for your client to establish a connection
to a remote url resource.
"""),
"remote_max_retries": dals("""
The maximum number of retries each HTTP connection should attempt.
"""),
"remote_read_timeout_secs": dals("""
Once conda has connected to a remote resource and sent an HTTP request, the
read timeout is the number of seconds conda will wait for the server to send
a response.
"""),
"report_errors": dals("""
Opt in, or opt out, of automatic error reporting to core maintainers. Error
reports are anonymous, with only the error stack trace and information given
by `conda info` being sent.
"""),
"rollback_enabled": dals("""
Should any error occur during an unlink/link transaction, revert any disk
mutations made to that point in the transaction.
"""),
"safety_checks": dals("""
Enforce available safety guarantees during package installation.
The value must be one of 'enabled', 'warn', or 'disabled'.
"""),
"shortcuts": dals("""
Allow packages to create OS-specific shortcuts (e.g. in the Windows Start
Menu) at install time.
"""),
"show_channel_urls": dals("""
Show channel URLs when displaying what is going to be downloaded.
"""),
"ssl_verify": dals("""
Conda verifies SSL certificates for HTTPS requests, just like a web
browser. By default, SSL verification is enabled, and conda operations will
fail if a required url's certificate cannot be verified. Setting ssl_verify to
False disables certification verificaiton. The value for ssl_verify can also
be (1) a path to a CA bundle file, or (2) a path to a directory containing
certificates of trusted CA.
"""),
"track_features": dals("""
A list of features that are tracked by default. An entry here is similar to
adding an entry to the create_default_packages list.
"""),
"use_index_cache": dals("""
Use cache of channel index files, even if it has expired.
"""),
"use_pip": dals("""
Include non-conda-installed python packages with conda list. This does not
affect any conda command or functionality other than the output of the
command conda list.
"""),
"verbosity": dals("""
Sets output log level. 0 is warn. 1 is info. 2 is debug. 3 is trace.
"""),
"whitelist_channels": dals("""
The exclusive list of channels allowed to be used on the system. Use of any
other channels will result in an error. If conda-build channels are to be
allowed, along with the --use-local command line flag, be sure to include the
'local' channel in the list. If the list is empty or left undefined, no
channel exclusions will be enforced.
"""),
}
)
|
https://github.com/conda/conda/issues/6882
|
% conda create -n no-ipython humidity -c davidmertz -y # Silly example package
[... creating ...]
% conda activate no-ipython
(no-ipython) % ipython
Python 3.6.4 |Anaconda custom (64-bit)| (default, Jan 16 2018, 12:04:33)
Type 'copyright', 'credits' or 'license' for more information
IPython 6.1.0 -- An enhanced Interactive Python. Type '?' for help.
In [1]: import humidity
---------------------------------------------------------------------------
ModuleNotFoundError Traceback (most recent call last)
<ipython-input-1-5cdf29aced62> in <module>()
----> 1 import humidity
ModuleNotFoundError: No module named 'humidity'
In [2]:
Do you really want to exit ([y]/n)? y
(no-ipython) % which ipython
/Users/dmertz/anaconda3/bin/ipython
(no-ipython) % conda install ipython -y
[... installing ...]
(no-ipython) % which ipython
/Users/dmertz/anaconda3/envs/no-ipython/bin/ipython
(no-ipython) % ipython
Python 3.6.4 |Anaconda, Inc.| (default, Jan 16 2018, 12:04:33)
Type 'copyright', 'credits' or 'license' for more information
IPython 6.2.1 -- An enhanced Interactive Python. Type '?' for help.
In [1]: import humidity
In [2]:
|
ModuleNotFoundError
|
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