kejian/codesearchnet-python-linelen40-full

text stringlengths 89 104k	code_tokens list	avg_line_len float64 7.91 980	score float64 0 630
def normalized_energy_at_conditions(self, pH, V): """ Energy at an electrochemical condition, compatible with numpy arrays for pH/V input Args: pH (float): pH at condition V (float): applied potential at condition Returns: energy normalized b...	[ "def", "normalized_energy_at_conditions", "(", "self", ",", "pH", ",", "V", ")", ":", "return", "self", ".", "energy_at_conditions", "(", "pH", ",", "V", ")", "*", "self", ".", "normalization_factor" ]	33.384615	18.923077
def to_md_file(string, filename, out_path="."): """Import a module path and create an api doc from it Args: string (str): string with line breaks to write to file. filename (str): filename without the .md out_path (str): The output directory """ md_file = "%s.md" % filename ...	[ "def", "to_md_file", "(", "string", ",", "filename", ",", "out_path", "=", "\".\"", ")", ":", "md_file", "=", "\"%s.md\"", "%", "filename", "with", "open", "(", "os", ".", "path", ".", "join", "(", "out_path", ",", "md_file", ")", ",", "\"w\"", ")", ...	35.416667	13.083333
def to_xdr_object(self): """Creates an XDR Operation object that represents this :class:`ManageData`. """ data_name = bytearray(self.data_name, encoding='utf-8') if self.data_value is not None: if isinstance(self.data_value, bytes): data_value = [byt...	[ "def", "to_xdr_object", "(", "self", ")", ":", "data_name", "=", "bytearray", "(", "self", ".", "data_name", ",", "encoding", "=", "'utf-8'", ")", "if", "self", ".", "data_value", "is", "not", "None", ":", "if", "isinstance", "(", "self", ".", "data_valu...	37.5	16.944444
def register_uri_backend(uri_scheme, create_method, module, c14n_uri_method, escape, cast, is_connected): """ This method is intended to be used by backends only. It lets them register their services, identified by the URI scheme, at import time. The associated method create_method must take one pa...	[ "def", "register_uri_backend", "(", "uri_scheme", ",", "create_method", ",", "module", ",", "c14n_uri_method", ",", "escape", ",", "cast", ",", "is_connected", ")", ":", "try", ":", "delta_api", "=", "__compare_api_level", "(", "module", ".", "apilevel", ",", ...	57.444444	30.422222
def parse_ACCT(chunk, encryption_key): """ Parses an account chunk, decrypts and creates an Account object. May return nil when the chunk does not represent an account. All secure notes are ACCTs but not all of them strore account information. """ # TODO: Make a test case that covers secure ...	[ "def", "parse_ACCT", "(", "chunk", ",", "encryption_key", ")", ":", "# TODO: Make a test case that covers secure note account", "io", "=", "BytesIO", "(", "chunk", ".", "payload", ")", "id", "=", "read_item", "(", "io", ")", "name", "=", "decode_aes256_plain_auto", ...	38.645161	19.935484
def write_autoconf(self, filename, header="/* Generated by Kconfiglib (https://github.com/ulfalizer/Kconfiglib) */\n"): r""" Writes out symbol values as a C header file, matching the format used by include/generated/autoconf.h in the kernel. The ordering of the #d...	[ "def", "write_autoconf", "(", "self", ",", "filename", ",", "header", "=", "\"/* Generated by Kconfiglib (https://github.com/ulfalizer/Kconfiglib) */\\n\"", ")", ":", "with", "self", ".", "_open", "(", "filename", ",", "\"w\"", ")", "as", "f", ":", "f", ".", "writ...	46.066667	22.933333
def get_remote_evb_mode(self, tlv_data): """Returns the EVB mode in the TLV. """ ret, parsed_val = self._check_common_tlv_format( tlv_data, "mode:", "EVB Configuration TLV") if not ret: return None mode_val = parsed_val[1].split()[0].strip() return mode_va...	[ "def", "get_remote_evb_mode", "(", "self", ",", "tlv_data", ")", ":", "ret", ",", "parsed_val", "=", "self", ".", "_check_common_tlv_format", "(", "tlv_data", ",", "\"mode:\"", ",", "\"EVB Configuration TLV\"", ")", "if", "not", "ret", ":", "return", "None", "...	39.25	12.125
def _imm_trans_setattr(self, name, value): ''' An immutable's transient setattr allows params to be set, and runs checks as they are. ''' params = _imm_param_data(self) dd = object.__getattribute__(self, '__dict__') if name in params: (_, tx_fn, arg_lists, check_fns, deps) = params[name]...	[ "def", "_imm_trans_setattr", "(", "self", ",", "name", ",", "value", ")", ":", "params", "=", "_imm_param_data", "(", "self", ")", "dd", "=", "object", ".", "__getattribute__", "(", "self", ",", "'__dict__'", ")", "if", "name", "in", "params", ":", "(", ...	45.305556	22.916667
def add_selector(name): """ Builds and registers a :class:`Selector` object with the given name and configuration. Args: name (str): The name of the selector. Yields: SelectorFactory: The factory that will build the :class:`Selector`. """ factory = SelectorFactory(name) yi...	[ "def", "add_selector", "(", "name", ")", ":", "factory", "=", "SelectorFactory", "(", "name", ")", "yield", "factory", "selectors", "[", "name", "]", "=", "factory", ".", "build_selector", "(", ")" ]	26.071429	22.928571
def exists(self): """ :return: True if the submodule exists, False otherwise. Please note that a submodule may exist (in the .gitmodules file) even though its module doesn't exist on disk""" # keep attributes for later, and restore them if we have no valid data # ...	[ "def", "exists", "(", "self", ")", ":", "# keep attributes for later, and restore them if we have no valid data", "# this way we do not actually alter the state of the object", "loc", "=", "locals", "(", ")", "for", "attr", "in", "self", ".", "_cache_attrs", ":", "try", ":"...	37.433333	18.2
def detect_r_peaks(ecg_signal, sample_rate, time_units=False, volts=False, resolution=None, device="biosignalsplux", plot_result=False): """ ----- Brief ----- Python implementation of R peak detection algorithm (proposed by Raja Selvaraj). ----------- Description ----...	[ "def", "detect_r_peaks", "(", "ecg_signal", ",", "sample_rate", ",", "time_units", "=", "False", ",", "volts", "=", "False", ",", "resolution", "=", "None", ",", "device", "=", "\"biosignalsplux\"", ",", "plot_result", "=", "False", ")", ":", "if", "volts", ...	37.975	28.375
def ms_zoom(self, viewer, event, data_x, data_y, msg=True): """Zoom the image by dragging the cursor left or right. """ if not self.canzoom: return True msg = self.settings.get('msg_zoom', msg) x, y = self.get_win_xy(viewer) if event.state == 'move': ...	[ "def", "ms_zoom", "(", "self", ",", "viewer", ",", "event", ",", "data_x", ",", "data_y", ",", "msg", "=", "True", ")", ":", "if", "not", "self", ".", "canzoom", ":", "return", "True", "msg", "=", "self", ".", "settings", ".", "get", "(", "'msg_zoo...	30	16.285714
def _queue_management_worker(executor_reference, processes, pending_work_items, work_ids_queue, call_queue, result_queue): """Manages the communication between this proces...	[ "def", "_queue_management_worker", "(", "executor_reference", ",", "processes", ",", "pending_work_items", ",", "work_ids_queue", ",", "call_queue", ",", "result_queue", ")", ":", "nb_shutdown_processes", "=", "[", "0", "]", "def", "shutdown_one_process", "(", ")", ...	45.769231	17.830769
def enrich(self, studyAreas, dataCollections=None, analysisVariables=None, addDerivativeVariables="all", studyAreasOptions=None, useData=None, intersectingGeographies=None, returnGeometry=False, ...	[ "def", "enrich", "(", "self", ",", "studyAreas", ",", "dataCollections", "=", "None", ",", "analysisVariables", "=", "None", ",", "addDerivativeVariables", "=", "\"all\"", ",", "studyAreasOptions", "=", "None", ",", "useData", "=", "None", ",", "intersectingGeog...	55.064516	22.467742
def convert_schema(self, nuc_tuple, inner_sat_tuples, outer_sat_tuples): """subtrees are represented as (tree, linear tree position) tuples. returns relation as root node. """ nuc_tree, nuc_pos = nuc_tuple sat_tuples = inner_sat_tuples + outer_sat_tuples last_sat_tuple_p...	[ "def", "convert_schema", "(", "self", ",", "nuc_tuple", ",", "inner_sat_tuples", ",", "outer_sat_tuples", ")", ":", "nuc_tree", ",", "nuc_pos", "=", "nuc_tuple", "sat_tuples", "=", "inner_sat_tuples", "+", "outer_sat_tuples", "last_sat_tuple_pos", "=", "len", "(", ...	42.142857	20.52381
def _run(): """Entry point for package and cli uses""" args = parse_args() # parse custom parameters custom_meta = None if args.custom_meta: print "Adding custom parameters:" custom_meta = {} try: for item in args.custom_meta.split(','): key, val...	[ "def", "_run", "(", ")", ":", "args", "=", "parse_args", "(", ")", "# parse custom parameters", "custom_meta", "=", "None", "if", "args", ".", "custom_meta", ":", "print", "\"Adding custom parameters:\"", "custom_meta", "=", "{", "}", "try", ":", "for", "item"...	39.454545	19.863636
def convert_tree_to_newick(tree, otu_group, label_key, leaf_labels, needs_quotes_pattern=NEWICK_NEEDING_QUOTING, subtree_id=None, bracket_ingroup=False): ...	[ "def", "convert_tree_to_newick", "(", "tree", ",", "otu_group", ",", "label_key", ",", "leaf_labels", ",", "needs_quotes_pattern", "=", "NEWICK_NEEDING_QUOTING", ",", "subtree_id", "=", "None", ",", "bracket_ingroup", "=", "False", ")", ":", "assert", "(", "not", ...	43.7	13.975
def closest(self, coords=[], kwargs): """Snaps coordinate(s) to closest coordinate in Dataset Args: coords: List of coordinates expressed as tuples kwargs: Coordinates defined as keyword pairs Returns: List of tuples of the snapped coordinates R...	[ "def", "closest", "(", "self", ",", "coords", "=", "[", "]", ",", "", "", "kwargs", ")", ":", "if", "self", ".", "ndims", ">", "1", ":", "raise", "NotImplementedError", "(", "\"Closest method currently only \"", "\"implemented for 1D Elements\"", ")", "if", ...	38.586207	21.689655
def do_chunked_gzip(infh, outfh, filename): """ A memory-friendly way of compressing the data. """ import gzip gzfh = gzip.GzipFile('rawlogs', mode='wb', fileobj=outfh) if infh.closed: infh = open(infh.name, 'r') else: infh.seek(0) readsize = 0 sys.stdout.w...	[ "def", "do_chunked_gzip", "(", "infh", ",", "outfh", ",", "filename", ")", ":", "import", "gzip", "gzfh", "=", "gzip", ".", "GzipFile", "(", "'rawlogs'", ",", "mode", "=", "'wb'", ",", "fileobj", "=", "outfh", ")", "if", "infh", ".", "closed", ":", "...	25.705882	19.352941
def convert_column(data, schemae): """Convert known types from primitive to rich.""" ctype = schemae.converted_type if ctype == parquet_thrift.ConvertedType.DECIMAL: scale_factor = Decimal("10e-{}".format(schemae.scale)) if schemae.type == parquet_thrift.Type.INT32 or schemae.type == parquet...	[ "def", "convert_column", "(", "data", ",", "schemae", ")", ":", "ctype", "=", "schemae", ".", "converted_type", "if", "ctype", "==", "parquet_thrift", ".", "ConvertedType", ".", "DECIMAL", ":", "scale_factor", "=", "Decimal", "(", "\"10e-{}\"", ".", "format", ...	55.96875	19.8125
def greplines(lines, regexpr_list, reflags=0): """ grepfile - greps a specific file TODO: move to util_str, rework to be core of grepfile """ found_lines = [] found_lxs = [] # Ensure a list islist = isinstance(regexpr_list, (list, tuple)) islist2 = isinstance(reflags, (list, tuple))...	[ "def", "greplines", "(", "lines", ",", "regexpr_list", ",", "reflags", "=", "0", ")", ":", "found_lines", "=", "[", "]", "found_lxs", "=", "[", "]", "# Ensure a list", "islist", "=", "isinstance", "(", "regexpr_list", ",", "(", "list", ",", "tuple", ")",...	34.925	13.225
def biclique_size(self, xmin, xmax, ymin, ymax): """Returns the size parameters ``(m,n)`` of the complete bipartite graph :math:`K_{m,n}` comprised of ``m`` unbroken chains of horizontally-aligned qubits and ``n`` unbroken chains of vertically-aligned qubits (known as line bundles) ...	[ "def", "biclique_size", "(", "self", ",", "xmin", ",", "xmax", ",", "ymin", ",", "ymax", ")", ":", "try", ":", "return", "self", ".", "_biclique_size", "[", "xmin", ",", "xmax", ",", "ymin", ",", "ymax", "]", "except", "KeyError", ":", "hscore", "=",...	45.269231	23.923077
def _bcrypt_interpret_ec_key_blob(key_type, blob_struct, blob): """ Take a CNG BCRYPT_ECCKEY_BLOB and converts it into an ASN.1 structure :param key_type: A unicode string of "private" or "public" :param blob_struct: An instance of BCRYPT_ECCKEY_BLOB :param blob: A byte st...	[ "def", "_bcrypt_interpret_ec_key_blob", "(", "key_type", ",", "blob_struct", ",", "blob", ")", ":", "magic", "=", "native", "(", "int", ",", "blob_struct", ".", "dwMagic", ")", "key_byte_length", "=", "native", "(", "int", ",", "blob_struct", ".", "cbKey", "...	31.594203	20.057971
def show_dependencies(self, stream=sys.stdout): """Writes to the given stream the ASCII representation of the dependency tree.""" def child_iter(node): return [d.node for d in node.deps] def text_str(node): return colored(str(node), color=node.status.color_opts["color"])...	[ "def", "show_dependencies", "(", "self", ",", "stream", "=", "sys", ".", "stdout", ")", ":", "def", "child_iter", "(", "node", ")", ":", "return", "[", "d", ".", "node", "for", "d", "in", "node", ".", "deps", "]", "def", "text_str", "(", "node", ")...	42.2	18.3
def get_vpc_dict(): """Returns dictionary of named VPCs {name: vpc} Assert fails if there's more than one VPC with same name.""" client = get_ec2_client() response = client.describe_vpcs() assert is_good_response(response) result = OrderedDict() ec2 = get_ec2_resource() for vpc_response in response['...	[ "def", "get_vpc_dict", "(", ")", ":", "client", "=", "get_ec2_client", "(", ")", "response", "=", "client", ".", "describe_vpcs", "(", ")", "assert", "is_good_response", "(", "response", ")", "result", "=", "OrderedDict", "(", ")", "ec2", "=", "get_ec2_resou...	28.652174	20.086957
def increment_error(self, error: Exception): '''Increment the error counter preferring base exceptions.''' _logger.debug('Increment error %s', error) for error_class in ERROR_PRIORITIES: if isinstance(error, error_class): self.errors[error_class] += 1 ...	[ "def", "increment_error", "(", "self", ",", "error", ":", "Exception", ")", ":", "_logger", ".", "debug", "(", "'Increment error %s'", ",", "error", ")", "for", "error_class", "in", "ERROR_PRIORITIES", ":", "if", "isinstance", "(", "error", ",", "error_class",...	35.7	15.9
def _delete(self, namespace, stream, start_id, end_time, configuration): """ Delete events for `stream` between `start_id` and `end_time`. `stream` : The stream to delete events for. `start_id` : Delete events with id > `start_id`. `end_time` : Delete events ending <= `end_time`. `configuration`...	[ "def", "_delete", "(", "self", ",", "namespace", ",", "stream", ",", "start_id", ",", "end_time", ",", "configuration", ")", ":", "stream", "=", "self", ".", "get_stream", "(", "namespace", ",", "stream", ",", "configuration", ")", "return", "stream", ".",...	50.071429	16.214286
def required_attributes(self): """tuple: The schema's required attributed. """ # Deprecate warnings.warn( 'Property "package.required_attributes" is deprecated.', UserWarning) required = () # Get required try: if self.profile....	[ "def", "required_attributes", "(", "self", ")", ":", "# Deprecate", "warnings", ".", "warn", "(", "'Property \"package.required_attributes\" is deprecated.'", ",", "UserWarning", ")", "required", "=", "(", ")", "# Get required", "try", ":", "if", "self", ".", "profi...	25.166667	19.611111
def string_to_transition(s): """s is a string of the form a,b or a,b->c,d""" from .machines import Transition s = lexer(s) lhs = parse_multiple(s, parse_store) if s.pos < len(s) and s.cur == "->": s.pos += 1 rhs = parse_multiple(s, parse_store) else: rhs = () parse_en...	[ "def", "string_to_transition", "(", "s", ")", ":", "from", ".", "machines", "import", "Transition", "s", "=", "lexer", "(", "s", ")", "lhs", "=", "parse_multiple", "(", "s", ",", "parse_store", ")", "if", "s", ".", "pos", "<", "len", "(", "s", ")", ...	28.75	12.833333
def after_run(self, remote_file_data): """ Save uuid of file to our LocalFile :param remote_file_data: dict: DukeDS file data """ if self.file_upload_post_processor: self.file_upload_post_processor.run(self.settings.data_service, remote_file_data) remote_file_...	[ "def", "after_run", "(", "self", ",", "remote_file_data", ")", ":", "if", "self", ".", "file_upload_post_processor", ":", "self", ".", "file_upload_post_processor", ".", "run", "(", "self", ".", "settings", ".", "data_service", ",", "remote_file_data", ")", "rem...	46.8	13
def visit_Assign(self, node): """ In case of assignment assign value depend on r-value type dependencies. It is valid for subscript, `a[i] = foo()` means `a` type depend on `foo` return type. """ value_deps = self.visit(node.value) for target in node.targets: ...	[ "def", "visit_Assign", "(", "self", ",", "node", ")", ":", "value_deps", "=", "self", ".", "visit", "(", "node", ".", "value", ")", "for", "target", "in", "node", ".", "targets", ":", "name", "=", "get_variable", "(", "target", ")", "if", "isinstance",...	36.5	13.166667
def download(url, directory, filename=None): """ Download a file and return its filename on the local file system. If the file is already there, it will not be downloaded again. The filename is derived from the url if not provided. Return the filepath. """ if not filename: _, filename = ...	[ "def", "download", "(", "url", ",", "directory", ",", "filename", "=", "None", ")", ":", "if", "not", "filename", ":", "_", ",", "filename", "=", "os", ".", "path", ".", "split", "(", "url", ")", "directory", "=", "os", ".", "path", ".", "expanduse...	39.294118	13.058824
def compute(self, runner_results, setup=False, poll=False, ignore_errors=False): ''' walk through all results and increment stats ''' for (host, value) in runner_results.get('contacted', {}).iteritems(): if not ignore_errors and (('failed' in value and bool(value['failed'])) or ...	[ "def", "compute", "(", "self", ",", "runner_results", ",", "setup", "=", "False", ",", "poll", "=", "False", ",", "ignore_errors", "=", "False", ")", ":", "for", "(", "host", ",", "value", ")", "in", "runner_results", ".", "get", "(", "'contacted'", ",...	51.315789	22.157895
def send_body(self, data): """Send the response body. ``data`` should be a bytes-like object or a string. """ if type(data) is str: data = data.encode() self.connection.writer.write(data) yield from self.connection.writer.drain()	[ "def", "send_body", "(", "self", ",", "data", ")", ":", "if", "type", "(", "data", ")", "is", "str", ":", "data", "=", "data", ".", "encode", "(", ")", "self", ".", "connection", ".", "writer", ".", "write", "(", "data", ")", "yield", "from", "se...	28.2	14.3
def bootstrap_params(rv_cont, data, n_iter=5, **kwargs): """Bootstrap the fit params of a distribution. Parameters ========== rv_cont: scipy.stats.rv_continuous instance The distribution which to fit. data: array-like, 1d The data on which to fit. n_iter: int [default=10] ...	[ "def", "bootstrap_params", "(", "rv_cont", ",", "data", ",", "n_iter", "=", "5", ",", "", "", "kwargs", ")", ":", "fit_res", "=", "[", "]", "for", "_", "in", "range", "(", "n_iter", ")", ":", "params", "=", "rv_cont", ".", "fit", "(", "resample_1...	29.388889	13.777778
def OAuthClient( domain, consumer_key, consumer_secret, token, token_secret, user_agent=None, request_encoder=default_request_encoder, response_decoder=default_response_decoder ): """Creates a Freshbooks client for a freshbooks domain, using OAuth. Token management is assumed to ...	[ "def", "OAuthClient", "(", "domain", ",", "consumer_key", ",", "consumer_secret", ",", "token", ",", "token_secret", ",", "user_agent", "=", "None", ",", "request_encoder", "=", "default_request_encoder", ",", "response_decoder", "=", "default_response_decoder", ")", ...	32.484848	21.333333
def from_traceback(cls, tb): """ Construct a Bytecode from the given traceback """ while tb.tb_next: tb = tb.tb_next return cls(tb.tb_frame.f_code, current_offset=tb.tb_lasti)	[ "def", "from_traceback", "(", "cls", ",", "tb", ")", ":", "while", "tb", ".", "tb_next", ":", "tb", "=", "tb", ".", "tb_next", "return", "cls", "(", "tb", ".", "tb_frame", ".", "f_code", ",", "current_offset", "=", "tb", ".", "tb_lasti", ")" ]	41.4	13.2
def compare_results(save, best_hsp, tmp_results, tmp_gene_split): ''' Function for comparing hits and saving only the best hit ''' # Get data for comparison hit_id = best_hsp['hit_id'] new_start_query = best_hsp['query_start'] new_end_query = best_hsp['query_end'] new_start_sbjct = int(best_hsp['sbjct...	[ "def", "compare_results", "(", "save", ",", "best_hsp", ",", "tmp_results", ",", "tmp_gene_split", ")", ":", "# Get data for comparison", "hit_id", "=", "best_hsp", "[", "'hit_id'", "]", "new_start_query", "=", "best_hsp", "[", "'query_start'", "]", "new_end_query",...	46.704348	22.113043
def _handle_for(self, node, scope, ctxt, stream): """Handle For nodes :node: TODO :scope: TODO :ctxt: TODO :stream: TODO :returns: TODO """ self._dlog("handling for") if node.init is not None: # perform the init self._hand...	[ "def", "_handle_for", "(", "self", ",", "node", ",", "scope", ",", "ctxt", ",", "stream", ")", ":", "self", ".", "_dlog", "(", "\"handling for\"", ")", "if", "node", ".", "init", "is", "not", "None", ":", "# perform the init", "self", ".", "_handle_node"...	32.032258	17.709677
def default_commit_veto(request, response): """ When used as a commit veto, the logic in this function will cause the transaction to be aborted if: - An ``X-Tm`` response header with the value ``abort`` (or any value other than ``commit``) exists. - The response status code starts with ``4``...	[ "def", "default_commit_veto", "(", "request", ",", "response", ")", ":", "xtm", "=", "response", ".", "headers", ".", "get", "(", "'x-tm'", ")", "if", "xtm", "is", "not", "None", ":", "return", "xtm", "!=", "'commit'", "return", "response", ".", "status"...	32.8125	16.9375
def asString(self): """ Returns this query with an AsString function added to it. :return <Query> """ q = self.copy() q.addFunction(Query.Function.AsString) return q	[ "def", "asString", "(", "self", ")", ":", "q", "=", "self", ".", "copy", "(", ")", "q", ".", "addFunction", "(", "Query", ".", "Function", ".", "AsString", ")", "return", "q" ]	25.111111	15.333333
def check(self, key, value): """Check whether key,value pair is allowed. The key is allowed if there is a corresponding key in the defaults class attribute dict. The value is not allowed if it is a dict in the defaults dict and not a dict in value. Parameters ---------- ...	[ "def", "check", "(", "self", ",", "key", ",", "value", ")", ":", "# This test necessary to avoid unpickling errors in Python 3", "if", "hasattr", "(", "self", ",", "'dflt'", ")", ":", "# Get corresponding node to self, as determined by pth", "# attribute, of the defaults dict...	43.777778	19.407407
def check_reaction(reactants, products): """Check the stoichiometry and format of chemical reaction used for folder structure. list of reactants -> list of products """ reactant_list = [reactant.split('@')[0].strip( 'star').strip('gas') for reactant in reactants] product_list = [product....	[ "def", "check_reaction", "(", "reactants", ",", "products", ")", ":", "reactant_list", "=", "[", "reactant", ".", "split", "(", "'@'", ")", "[", "0", "]", ".", "strip", "(", "'star'", ")", ".", "strip", "(", "'gas'", ")", "for", "reactant", "in", "re...	33.7	16.433333
def edit(self, **kwargs): """ Modify this calendar event. :calls: `PUT /api/v1/calendar_events/:id \ <https://canvas.instructure.com/doc/api/calendar_events.html#method.calendar_events_api.update>`_ :rtype: :class:`canvasapi.calendar_event.CalendarEvent` """ res...	[ "def", "edit", "(", "self", ",", "", "", "kwargs", ")", ":", "response", "=", "self", ".", "_requester", ".", "request", "(", "'PUT'", ",", "'calendar_events/{}'", ".", "format", "(", "self", ".", "id", ")", ",", "_kwargs", "=", "combine_kwargs", "("...	33.315789	21.105263
def flavor_access_remove(flavor_id, project_id, profile=None, *kwargs): ''' Remove a project from the flavor access list CLI Example: .. code-block:: bash salt '' nova.flavor_access_remove flavor_id=fID project_id=pID ''' conn = _auth(profile, **kwargs) return conn.flavor_access...	[ "def", "flavor_access_remove", "(", "flavor_id", ",", "project_id", ",", "profile", "=", "None", ",", "", "", "kwargs", ")", ":", "conn", "=", "_auth", "(", "profile", ",", "", "", "kwargs", ")", "return", "conn", ".", "flavor_access_remove", "(", "f...	28.25	26.75
def diff(self, source_path='', target_path='', which=-1): """Build the diff between original docstring and proposed docstring. :type which: int -> -1 means all the dosctrings of the file -> >=0 means the index of the docstring to proceed (Default value = -1) :param source_pa...	[ "def", "diff", "(", "self", ",", "source_path", "=", "''", ",", "target_path", "=", "''", ",", "which", "=", "-", "1", ")", ":", "list_from", ",", "list_to", "=", "self", ".", "compute_before_after", "(", ")", "if", "source_path", ".", "startswith", "(...	43.307692	16.346154
def _compile_aggregation_expression(self, expr: Expression, scope: Dict[str, TensorFluent], batch_size: Optional[int] = None, noise: Optional[List[tf.Tensor]] =...	[ "def", "_compile_aggregation_expression", "(", "self", ",", "expr", ":", "Expression", ",", "scope", ":", "Dict", "[", "str", ",", "TensorFluent", "]", ",", "batch_size", ":", "Optional", "[", "int", "]", "=", "None", ",", "noise", ":", "Optional", "[", ...	35.5	23.642857
def smallest_flagged(heap, row): """Search the heap for the smallest element that is still flagged. Parameters ---------- heap: array of shape (3, n_samples, n_neighbors) The heaps to search row: int Which of the heaps to search Returns ------- index: int T...	[ "def", "smallest_flagged", "(", "heap", ",", "row", ")", ":", "ind", "=", "heap", "[", "0", ",", "row", "]", "dist", "=", "heap", "[", "1", ",", "row", "]", "flag", "=", "heap", "[", "2", ",", "row", "]", "min_dist", "=", "np", ".", "inf", "r...	22.388889	19.222222
def _simulate_stack(code: list) -> int: """ Simulates the actions of the stack, to check safety. This returns the maximum needed stack. """ max_stack = 0 curr_stack = 0 def _check_stack(ins): if curr_stack < 0: raise CompileError("Stack turned negative on instruction: ...	[ "def", "_simulate_stack", "(", "code", ":", "list", ")", "->", "int", ":", "max_stack", "=", "0", "curr_stack", "=", "0", "def", "_check_stack", "(", "ins", ")", ":", "if", "curr_stack", "<", "0", ":", "raise", "CompileError", "(", "\"Stack turned negative...	33.605263	19.078947
def add_consumer(self, consumer): """Add another consumer from a :class:`Consumer` instance.""" consumer.backend = self.backend self.consumers.append(consumer)	[ "def", "add_consumer", "(", "self", ",", "consumer", ")", ":", "consumer", ".", "backend", "=", "self", ".", "backend", "self", ".", "consumers", ".", "append", "(", "consumer", ")" ]	45	2.25
def factory(cfg, login, pswd, request_type): """ Instantiate ImportRequest :param cfg: request configuration, should consist of request description (url and parameters) and response for parsing result :param login: :param pswd: :param request_type: TYPE_GET_SINGLE_OBJECT ...	[ "def", "factory", "(", "cfg", ",", "login", ",", "pswd", ",", "request_type", ")", ":", "if", "request_type", "==", "ImportRequest", ".", "TYPE_GET_LIST", ":", "return", "ListImportRequest", "(", "cfg", ",", "login", ",", "pswd", ")", "elif", "request_type",...	48.8	22.533333
def from_dict(config_cls, dictionary, validate=False): """ Loads an instance of ``config_cls`` from a dictionary. :param type config_cls: The class to build an instance of :param dict dictionary: The dictionary to load from :param bool validate: Preforms validation before building ``config_cls``, ...	[ "def", "from_dict", "(", "config_cls", ",", "dictionary", ",", "validate", "=", "False", ")", ":", "return", "_build", "(", "config_cls", ",", "dictionary", ",", "validate", "=", "validate", ")" ]	39.25	18
def _init_glyph(self, plot, mapping, properties, key): """ Returns a Bokeh glyph object. """ properties = mpl_to_bokeh(properties) plot_method = '_'.join(key.split('_')[:-1]) renderer = getattr(plot, plot_method)(dict(properties, mapping)) return renderer, ren...	[ "def", "_init_glyph", "(", "self", ",", "plot", ",", "mapping", ",", "properties", ",", "key", ")", ":", "properties", "=", "mpl_to_bokeh", "(", "properties", ")", "plot_method", "=", "'_'", ".", "join", "(", "key", ".", "split", "(", "'_'", ")", "[", ...	40.5	8.75
def showinfo(title=None, message=None, **options): """Original doc: Show an info message""" return psidialogs.message(title=title, message=message)	[ "def", "showinfo", "(", "title", "=", "None", ",", "message", "=", "None", ",", "", "", "options", ")", ":", "return", "psidialogs", ".", "message", "(", "title", "=", "title", ",", "message", "=", "message", ")" ]	51	9.666667
async def __handle_ping(self, _ : Ping): """ Handle a Ping message. Pong the backend """ self.__last_ping = time.time() await ZMQUtils.send(self.__backend_socket, Pong())	[ "async", "def", "__handle_ping", "(", "self", ",", "_", ":", "Ping", ")", ":", "self", ".", "__last_ping", "=", "time", ".", "time", "(", ")", "await", "ZMQUtils", ".", "send", "(", "self", ".", "__backend_socket", ",", "Pong", "(", ")", ")" ]	47.75	5
def execute(self, compiled=None, path=None, use_eval=False, allow_show=True): """Execute compiled code.""" self.check_runner() if compiled is not None: if allow_show and self.show: print(compiled) if path is not None: # path means header is included, and ...	[ "def", "execute", "(", "self", ",", "compiled", "=", "None", ",", "path", "=", "None", ",", "use_eval", "=", "False", ",", "allow_show", "=", "True", ")", ":", "self", ".", "check_runner", "(", ")", "if", "compiled", "is", "not", "None", ":", "if", ...	55.3	21.7
def _create_sequences(self): '''Get all of the Sequences - Rosetta, ATOM, SEQRES, FASTA, UniParc.''' # Create the Rosetta sequences and the maps from the Rosetta sequences to the ATOM sequences try: self.pdb.construct_pdb_to_rosetta_residue_map(self.rosetta_scripts_path, rosetta_dat...	[ "def", "_create_sequences", "(", "self", ")", ":", "# Create the Rosetta sequences and the maps from the Rosetta sequences to the ATOM sequences", "try", ":", "self", ".", "pdb", ".", "construct_pdb_to_rosetta_residue_map", "(", "self", ".", "rosetta_scripts_path", ",", "rosett...	55.277778	31.240741
def what(self): """ May return a 'postponed' or 'rescheduled' string depending what the start and finish time of the event has been changed to. """ originalFromDt = dt.datetime.combine(self.except_date, timeFrom(self.overrides.time_fro...	[ "def", "what", "(", "self", ")", ":", "originalFromDt", "=", "dt", ".", "datetime", ".", "combine", "(", "self", ".", "except_date", ",", "timeFrom", "(", "self", ".", "overrides", ".", "time_from", ")", ")", "changedFromDt", "=", "dt", ".", "datetime", ...	52.05	23.05
def configure_logging(args): """Logging to console""" log_format = logging.Formatter('%(levelname)s:%(name)s:line %(lineno)s:%(message)s') log_level = logging.INFO if args.verbose else logging.WARN log_level = logging.DEBUG if args.debug else log_level console = logging.StreamHandler() console.s...	[ "def", "configure_logging", "(", "args", ")", ":", "log_format", "=", "logging", ".", "Formatter", "(", "'%(levelname)s:%(name)s:line %(lineno)s:%(message)s'", ")", "log_level", "=", "logging", ".", "INFO", "if", "args", ".", "verbose", "else", "logging", ".", "WA...	42.857143	10.571429
def downvote(self): """ Downvote the currently selected item. """ data = self.get_selected_item() if 'likes' not in data: self.term.flash() elif getattr(data['object'], 'archived'): self.term.show_notification("Voting disabled for archived post", s...	[ "def", "downvote", "(", "self", ")", ":", "data", "=", "self", ".", "get_selected_item", "(", ")", "if", "'likes'", "not", "in", "data", ":", "self", ".", "term", ".", "flash", "(", ")", "elif", "getattr", "(", "data", "[", "'object'", "]", ",", "'...	38.631579	9.684211
def set_public_domain(self, public_domain=None): """Sets the public domain flag. :param public_domain: the public domain status :type public_domain: ``boolean`` :raise: ``NoAccess`` -- ``Metadata.isReadOnly()`` is ``true`` *compliance: mandatory -- This method must be implement...	[ "def", "set_public_domain", "(", "self", ",", "public_domain", "=", "None", ")", ":", "if", "public_domain", "is", "None", ":", "raise", "NullArgument", "(", ")", "metadata", "=", "Metadata", "(", "", "", "settings", ".", "METADATA", "[", "'public_domain'"...	36.578947	17.526316
def iter_chunks(chunksize, iterables): """Iterates over zipped iterables in chunks.""" iterables = iter(zip(iterables)) while 1: chunk = tuple(islice(iterables, chunksize)) if not chunk: return yield chunk	[ "def", "iter_chunks", "(", "chunksize", ",", "", "iterables", ")", ":", "iterables", "=", "iter", "(", "zip", "(", "", "iterables", ")", ")", "while", "1", ":", "chunk", "=", "tuple", "(", "islice", "(", "iterables", ",", "chunksize", ")", ")", "if...	22.545455	20.454545
def formfield(self, **kwargs): """ Provide the custom form widget for the admin, since there isn't a form field mapped to ``GenericRelation`` model fields. """ from yacms.generic.forms import KeywordsWidget kwargs["widget"] = KeywordsWidget return super(KeywordsFi...	[ "def", "formfield", "(", "self", ",", "", "", "kwargs", ")", ":", "from", "yacms", ".", "generic", ".", "forms", "import", "KeywordsWidget", "kwargs", "[", "\"widget\"", "]", "=", "KeywordsWidget", "return", "super", "(", "KeywordsField", ",", "self", ")...	42.875	12.625
def create(**data): """ Create a customer. :param data: data required to create the customer :return: The customer resource :rtype resources.Customer """ http_client = HttpClient() response, _ = http_client.post(routes.url(routes.CUSTOMER_RESOURCE), data...	[ "def", "create", "(", "", "", "data", ")", ":", "http_client", "=", "HttpClient", "(", ")", "response", ",", "_", "=", "http_client", ".", "post", "(", "routes", ".", "url", "(", "routes", ".", "CUSTOMER_RESOURCE", ")", ",", "data", ")", "return", ...	29.666667	16.166667
def setShowLanguage(self, state): """ Sets the display mode for this widget to the inputed mode. :param state \| <bool> """ if state == self._showLanguage: return self._showLanguage = state self.setDirty()	[ "def", "setShowLanguage", "(", "self", ",", "state", ")", ":", "if", "state", "==", "self", ".", "_showLanguage", ":", "return", "self", ".", "_showLanguage", "=", "state", "self", ".", "setDirty", "(", ")" ]	26.818182	13
def remove(self, path): """ Remove the file at the given path. This only works on files; for removing folders (directories), use L{rmdir}. @param path: path (absolute or relative) of the file to remove @type path: str @raise IOError: if the path refers to a folder (dir...	[ "def", "remove", "(", "self", ",", "path", ")", ":", "path", "=", "self", ".", "_adjust_cwd", "(", "path", ")", "self", ".", "_log", "(", "DEBUG", ",", "'remove(%r)'", "%", "path", ")", "self", ".", "_request", "(", "CMD_REMOVE", ",", "path", ")" ]	34.692308	17.307692
def __validation_callback(self, event): # type: (str) -> Any """ Specific handling for the ``@ValidateComponent`` and ``@InvalidateComponent`` callback, as it requires checking arguments count and order :param event: The kind of life-cycle callback (in/validation) ...	[ "def", "__validation_callback", "(", "self", ",", "event", ")", ":", "# type: (str) -> Any", "comp_callback", "=", "self", ".", "context", ".", "get_callback", "(", "event", ")", "if", "not", "comp_callback", ":", "# No registered callback", "return", "True", "# G...	34.179487	19.769231
def make_innermost_setter(setter): """Wraps a setter so it applies to the inner-most results in `kernel_results`. The wrapped setter unwraps `kernel_results` and applies `setter` to the first results without an `inner_results` attribute. Args: setter: A callable that takes the kernel results as well as so...	[ "def", "make_innermost_setter", "(", "setter", ")", ":", "@", "functools", ".", "wraps", "(", "setter", ")", "def", "_new_setter", "(", "kernel_results", ",", "", "args", ",", "", "*", "kwargs", ")", ":", "\"\"\"Wrapped setter.\"\"\"", "results_stack", "=", ...	32.3	20.433333
def release_job(self, job_id, pri=65536, delay=0): """Put a job back on the queue to be processed (indicating that you've aborted it) You can only release a job which you have reserved using :func:`reserve_job()` or :func:`reserve_iter()`. :param job_id: Job ID to return :param pri: Ne...	[ "def", "release_job", "(", "self", ",", "job_id", ",", "pri", "=", "65536", ",", "delay", "=", "0", ")", ":", "if", "hasattr", "(", "job_id", ",", "'job_id'", ")", ":", "job_id", "=", "job_id", ".", "job_id", "with", "self", ".", "_sock_ctx", "(", ...	47.4375	21.625
def build_ordered_cliques(cliques, next_cliques): """Order the new cliques based on the order of their ancestors in the previous iteration.""" def sort_key(clique): return -len(clique[1]) if not cliques: return list(sorted( list(next_cliques.values())[0].items(), ...	[ "def", "build_ordered_cliques", "(", "cliques", ",", "next_cliques", ")", ":", "def", "sort_key", "(", "clique", ")", ":", "return", "-", "len", "(", "clique", "[", "1", "]", ")", "if", "not", "cliques", ":", "return", "list", "(", "sorted", "(", "list...	30.52	18.08
def load(path, size=None): """ Args: size (int): total number of records. If not provided, the returned dataflow will have no `__len__()`. It's needed because this metadata is not stored in the TFRecord file. """ gen = tf.python_io.tf_record_iterator(path) ...	[ "def", "load", "(", "path", ",", "size", "=", "None", ")", ":", "gen", "=", "tf", ".", "python_io", ".", "tf_record_iterator", "(", "path", ")", "ds", "=", "DataFromGenerator", "(", "gen", ")", "ds", "=", "MapData", "(", "ds", ",", "loads", ")", "i...	38.416667	18.25
def object_url(self, object_t, object_id=None, relation=None, **kwargs): """ Helper method to build the url to query to access the object passed as parameter :raises TypeError: if the object type is invalid """ if object_t not in self.objects_types: raise Typ...	[ "def", "object_url", "(", "self", ",", "object_t", ",", "object_id", "=", "None", ",", "relation", "=", "None", ",", "", "", "kwargs", ")", ":", "if", "object_t", "not", "in", "self", ".", "objects_types", ":", "raise", "TypeError", "(", "\"{} is not a...	41.769231	18
def get_board_mapping_parent_items(self, team_context, child_backlog_context_category_ref_name, workitem_ids): """GetBoardMappingParentItems. [Preview API] Returns the list of parent field filter model for the given list of workitem ids :param :class:`<TeamContext> <azure.devops.v5_0.work.models...	[ "def", "get_board_mapping_parent_items", "(", "self", ",", "team_context", ",", "child_backlog_context_category_ref_name", ",", "workitem_ids", ")", ":", "project", "=", "None", "team", "=", "None", "if", "team_context", "is", "not", "None", ":", "if", "team_context...	53.918919	25.405405
def computeMultipleExpectations(self, A_in, u_n, compute_uncertainty=True, compute_covariance=False, uncertainty_method=None, warning_cutoff=1.0e-10, return_theta=False): """Compute the expectations of multiple observables of phase space functions. Compute the expect...	[ "def", "computeMultipleExpectations", "(", "self", ",", "A_in", ",", "u_n", ",", "compute_uncertainty", "=", "True", ",", "compute_covariance", "=", "False", ",", "uncertainty_method", "=", "None", ",", "warning_cutoff", "=", "1.0e-10", ",", "return_theta", "=", ...	47.82	28.22
def _parse_build(encoded_data, pointer=0, spec=None, spec_params=None, strict=False): """ Parses a byte string generically, or using a spec with optional params :param encoded_data: A byte string that contains BER-encoded data :param pointer: The index in the byte string to parse from ...	[ "def", "_parse_build", "(", "encoded_data", ",", "pointer", "=", "0", ",", "spec", "=", "None", ",", "spec_params", "=", "None", ",", "strict", "=", "False", ")", ":", "encoded_len", "=", "len", "(", "encoded_data", ")", "info", ",", "new_pointer", "=", ...	40.027778	26.305556
def call_hook(self, name, kwargs): """ Call all hooks registered with this name. Returns a list of the returns values of the hooks (in the order the hooks were added)""" return [y for y in [x(kwargs) for x, _ in self._hooks.get(name, [])] if y is not None]	[ "def", "call_hook", "(", "self", ",", "name", ",", "", "", "kwargs", ")", ":", "return", "[", "y", "for", "y", "in", "[", "x", "(", "", "", "kwargs", ")", "for", "x", ",", "_", "in", "self", ".", "_hooks", ".", "get", "(", "name", ",", ...	91.333333	20
def _set_prompt(self): """Set prompt so it displays the current working directory.""" self.cwd = os.getcwd() self.prompt = Fore.CYAN + '{!r} $ '.format(self.cwd) + Fore.RESET	[ "def", "_set_prompt", "(", "self", ")", ":", "self", ".", "cwd", "=", "os", ".", "getcwd", "(", ")", "self", ".", "prompt", "=", "Fore", ".", "CYAN", "+", "'{!r} $ '", ".", "format", "(", "self", ".", "cwd", ")", "+", "Fore", ".", "RESET" ]	48.75	15.25
def expand_alias(self, line): """ Expand an alias in the command line Returns the provided command line, possibly with the first word (command) translated according to alias expansion rules. [ipython]\|16> _ip.expand_aliases("np myfile.txt") <16> 'q:/opt/np/notepad++.ex...	[ "def", "expand_alias", "(", "self", ",", "line", ")", ":", "pre", ",", "_", ",", "fn", ",", "rest", "=", "split_user_input", "(", "line", ")", "res", "=", "pre", "+", "self", ".", "expand_aliases", "(", "fn", ",", "rest", ")", "return", "res" ]	34.615385	19.846154
def output_datacenter(gandi, datacenter, output_keys, justify=14): """ Helper to output datacenter information.""" output_generic(gandi, datacenter, output_keys, justify) if 'dc_name' in output_keys: output_line(gandi, 'datacenter', datacenter['name'], justify) if 'status' in output_keys: ...	[ "def", "output_datacenter", "(", "gandi", ",", "datacenter", ",", "output_keys", ",", "justify", "=", "14", ")", ":", "output_generic", "(", "gandi", ",", "datacenter", ",", "output_keys", ",", "justify", ")", "if", "'dc_name'", "in", "output_keys", ":", "ou...	36.166667	20.291667
def setup_logging(name): """Setup logging according to environment variables.""" logger = logging.getLogger(__name__) if 'NVIM_PYTHON_LOG_FILE' in os.environ: prefix = os.environ['NVIM_PYTHON_LOG_FILE'].strip() major_version = sys.version_info[0] logfile = '{}_py{}_{}'.format(prefix,...	[ "def", "setup_logging", "(", "name", ")", ":", "logger", "=", "logging", ".", "getLogger", "(", "__name__", ")", "if", "'NVIM_PYTHON_LOG_FILE'", "in", "os", ".", "environ", ":", "prefix", "=", "os", ".", "environ", "[", "'NVIM_PYTHON_LOG_FILE'", "]", ".", ...	45.4	11.35
def bundles(): """Display bundles.""" per_page = int(request.args.get('per_page', 30)) page = int(request.args.get('page', 1)) query = store.bundles() query_page = query.paginate(page, per_page=per_page) data = [] for bundle_obj in query_page.items: bundle_data = bundle_obj.to_dict(...	[ "def", "bundles", "(", ")", ":", "per_page", "=", "int", "(", "request", ".", "args", ".", "get", "(", "'per_page'", ",", "30", ")", ")", "page", "=", "int", "(", "request", ".", "args", ".", "get", "(", "'page'", ",", "1", ")", ")", "query", "...	33.142857	17.428571
def enable_cache(self): """ Enable client-side caching for the current request """ self.set_header('Cache-Control', 'max-age=%d, public' % self.CACHE_TIME) now = datetime.datetime.now() expires = now + datetime.timedelta(seconds=self.CACHE_TIME) self.set_header('Expires', expire...	[ "def", "enable_cache", "(", "self", ")", ":", "self", ".", "set_header", "(", "'Cache-Control'", ",", "'max-age=%d, public'", "%", "self", ".", "CACHE_TIME", ")", "now", "=", "datetime", ".", "datetime", ".", "now", "(", ")", "expires", "=", "now", "+", ...	46.222222	25.555556
def get_quality_options(self, channel): """Get the available quality options for streams of the given channel Possible values in the list: * source * high * medium * low * mobile * audio :param channel: the channel or channel name ...	[ "def", "get_quality_options", "(", "self", ",", "channel", ")", ":", "optionmap", "=", "{", "'chunked'", ":", "'source'", ",", "'high'", ":", "'high'", ",", "'medium'", ":", "'medium'", ",", "'low'", ":", "'low'", ",", "'mobile'", ":", "'mobile'", ",", "...	31.666667	13.2
def _discover_params(cls): """ Returns a dict where filter keyword is key, and class is value. To handle param alias (maxRecords or max_records), both versions are added. """ try: return cls.filters except AttributeError: filters...	[ "def", "_discover_params", "(", "cls", ")", ":", "try", ":", "return", "cls", ".", "filters", "except", "AttributeError", ":", "filters", "=", "{", "}", "for", "param_class_name", "in", "dir", "(", "cls", ")", ":", "param_class", "=", "getattr", "(", "cl...	36.666667	17.222222
def __split_procedure(self, split_node): """! @brief Starts node splitting procedure in the CF-tree from the specify node. @param[in] split_node (cfnode): CF-tree node that should be splitted. """ if (split_node is self.__root): self.__root =...	[ "def", "__split_procedure", "(", "self", ",", "split_node", ")", ":", "if", "(", "split_node", "is", "self", ".", "__root", ")", ":", "self", ".", "__root", "=", "non_leaf_node", "(", "split_node", ".", "feature", ",", "None", ",", "[", "split_node", "]"...	35.896552	15.310345
def create(self, name, nopassword=None, secret=None, encryption=None): """Creates a new user on the local system. Creating users requires either a secret (password) or the nopassword keyword to be specified. Args: name (str): The name of the user to craete nopa...	[ "def", "create", "(", "self", ",", "name", ",", "nopassword", "=", "None", ",", "secret", "=", "None", ",", "encryption", "=", "None", ")", ":", "if", "secret", "is", "not", "None", ":", "return", "self", ".", "create_with_secret", "(", "name", ",", ...	37.193548	25.032258
def add_task(self, cor, name=None, finalizer=None, stop_timeout=1.0, parent=None): """Schedule a task to run on the background event loop. This method will start the given coroutine as a task and keep track of it so that it can be properly shutdown which the event loop is stopped. ...	[ "def", "add_task", "(", "self", ",", "cor", ",", "name", "=", "None", ",", "finalizer", "=", "None", ",", "stop_timeout", "=", "1.0", ",", "parent", "=", "None", ")", ":", "if", "self", ".", "stopping", ":", "raise", "LoopStoppingError", "(", "\"Cannot...	47.3125	30.65625
def DeletePendingNotification(self, timestamp): """Deletes the pending notification with the given timestamp. Args: timestamp: The timestamp of the notification. Assumed to be unique. Raises: UniqueKeyError: Raised if multiple notifications have the timestamp. """ shown_notifications =...	[ "def", "DeletePendingNotification", "(", "self", ",", "timestamp", ")", ":", "shown_notifications", "=", "self", ".", "Get", "(", "self", ".", "Schema", ".", "SHOWN_NOTIFICATIONS", ")", "if", "not", "shown_notifications", ":", "shown_notifications", "=", "self", ...	34.612903	22.290323
def signRequest(self, req: Request, identifier: Identifier=None) -> Request: """ Signs request. Modifies reqId and signature. May modify identifier. :param req: request :param requestIdStore: request id generator :param identifier: signer ...	[ "def", "signRequest", "(", "self", ",", "req", ":", "Request", ",", "identifier", ":", "Identifier", "=", "None", ")", "->", "Request", ":", "idr", "=", "self", ".", "requiredIdr", "(", "idr", "=", "identifier", "or", "req", ".", "_identifier", ")", "#...	39.48	18.44
def cublasCgemv(handle, trans, m, n, alpha, A, lda, x, incx, beta, y, incy): """ Matrix-vector product for complex general matrix. """ status = _libcublas.cublasCgemv_v2(handle, _CUBLAS_OP[trans], m, n, ctypes.byref(cuda.cuF...	[ "def", "cublasCgemv", "(", "handle", ",", "trans", ",", "m", ",", "n", ",", "alpha", ",", "A", ",", "lda", ",", "x", ",", "incx", ",", "beta", ",", "y", ",", "incy", ")", ":", "status", "=", "_libcublas", ".", "cublasCgemv_v2", "(", "handle", ","...	48.8	25.333333
def _fadn_par(vec, geom): """First non-zero Atomic Displacement that is Non-Parallel with Vec Utility function to identify the first atomic displacement in a geometry that is both (a) not the zero vector and (b) non-(anti-)parallel with a reference vector. Parameters ---------- vec ...	[ "def", "_fadn_par", "(", "vec", ",", "geom", ")", ":", "# Imports", "import", "numpy", "as", "np", "from", "scipy", "import", "linalg", "as", "spla", "from", ".", ".", "const", "import", "PRM", "from", ".", ".", "error", "import", "InertiaError", "from",...	29.507463	21.358209
def dict_fun(data, function): """ Apply a function to all values in a dictionary, return a dictionary with results. Parameters ---------- data : dict a dictionary whose values are adequate input to the second argument of this function. function : function a function...	[ "def", "dict_fun", "(", "data", ",", "function", ")", ":", "return", "dict", "(", "(", "k", ",", "function", "(", "v", ")", ")", "for", "k", ",", "v", "in", "list", "(", "data", ".", "items", "(", ")", ")", ")" ]	27.210526	21
def bin_to_edge_slice(s, n): """ Convert a bin slice into a bin edge slice. """ s = canonify_slice(s, n) start = s.start stop = s.stop if start > stop: _stop = start + 1 start = stop + 1 stop = _stop start = max(start - 1, 0) step = abs(s.step) if stop <= ...	[ "def", "bin_to_edge_slice", "(", "s", ",", "n", ")", ":", "s", "=", "canonify_slice", "(", "s", ",", "n", ")", "start", "=", "s", ".", "start", "stop", "=", "s", ".", "stop", "if", "start", ">", "stop", ":", "_stop", "=", "start", "+", "1", "st...	28.315789	12.526316
def filter_source(self, source): # pylint: disable=R0911,R0912 """ Apply filters to ``source`` and return ``True`` if uncertainty should be applied to it. """ for key, value in self.filters.items(): if key == 'applyToTectonicRegionType': if val...	[ "def", "filter_source", "(", "self", ",", "source", ")", ":", "# pylint: disable=R0911,R0912", "for", "key", ",", "value", "in", "self", ".", "filters", ".", "items", "(", ")", ":", "if", "key", "==", "'applyToTectonicRegionType'", ":", "if", "value", "!=", ...	44.567568	13.27027
def screenshot(filename="screenshot.png"): """ Save a screenshot of the current rendering window. """ if not settings.plotter_instance.window: colors.printc('~bomb screenshot(): Rendering window is not present, skip.', c=1) return w2if = vtk.vtkWindowToImageFilter() w2if.ShouldRe...	[ "def", "screenshot", "(", "filename", "=", "\"screenshot.png\"", ")", ":", "if", "not", "settings", ".", "plotter_instance", ".", "window", ":", "colors", ".", "printc", "(", "'~bomb screenshot(): Rendering window is not present, skip.'", ",", "c", "=", "1", ")", ...	37.0625	12.6875
def complete_contexts(self): ''' Returns a list of context interfaces that yield a complete context. ''' interfaces = [] [interfaces.extend(i.complete_contexts()) for i in six.itervalues(self.templates)] return interfaces	[ "def", "complete_contexts", "(", "self", ")", ":", "interfaces", "=", "[", "]", "[", "interfaces", ".", "extend", "(", "i", ".", "complete_contexts", "(", ")", ")", "for", "i", "in", "six", ".", "itervalues", "(", "self", ".", "templates", ")", "]", ...	33.875	19.375
def human_xor_00(X, y, model_generator, method_name): """ XOR (false/false) This tests how well a feature attribution method agrees with human intuition for an eXclusive OR operation combined with linear effects. This metric deals specifically with the question of credit allocation for the following fu...	[ "def", "human_xor_00", "(", "X", ",", "y", ",", "model_generator", ",", "method_name", ")", ":", "return", "_human_xor", "(", "X", ",", "model_generator", ",", "method_name", ",", "False", ",", "False", ")" ]	37.733333	21.6
def tensor_to_6component(tensor, frame='USE'): ''' Returns a tensor to six component vector [Mrr, Mtt, Mpp, Mrt, Mrp, Mtp] ''' if 'NED' in frame: tensor = ned_to_use(tensor) return [tensor[0, 0], tensor[1, 1], tensor[2, 2], tensor[0, 1], tensor[0, 2], tensor[1, 2]]	[ "def", "tensor_to_6component", "(", "tensor", ",", "frame", "=", "'USE'", ")", ":", "if", "'NED'", "in", "frame", ":", "tensor", "=", "ned_to_use", "(", "tensor", ")", "return", "[", "tensor", "[", "0", ",", "0", "]", ",", "tensor", "[", "1", ",", ...	33.111111	22
def filter(self): """Get the query of this Query. The device query :return: The query of this Query. :rtype: dict """ if isinstance(self._filter, str): return self._decode_query(self._filter) return self._filter	[ "def", "filter", "(", "self", ")", ":", "if", "isinstance", "(", "self", ".", "_filter", ",", "str", ")", ":", "return", "self", ".", "_decode_query", "(", "self", ".", "_filter", ")", "return", "self", ".", "_filter" ]	24.636364	15
def _check_version(self, major, minor): """ Check if the detected bugzilla version is >= passed major/minor pair. """ if major < self.bz_ver_major: return True if (major == self.bz_ver_major and minor <= self.bz_ver_minor): return True return False	[ "def", "_check_version", "(", "self", ",", "major", ",", "minor", ")", ":", "if", "major", "<", "self", ".", "bz_ver_major", ":", "return", "True", "if", "(", "major", "==", "self", ".", "bz_ver_major", "and", "minor", "<=", "self", ".", "bz_ver_minor", ...	34.666667	14

def normalized_energy_at_conditions(self, pH, V): """ Energy at an electrochemical condition, compatible with numpy arrays for pH/V input Args: pH (float): pH at condition V (float): applied potential at condition Returns: energy normalized b...

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33.384615

18.923077

def to_md_file(string, filename, out_path="."): """Import a module path and create an api doc from it Args: string (str): string with line breaks to write to file. filename (str): filename without the .md out_path (str): The output directory """ md_file = "%s.md" % filename ...

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35.416667

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def to_xdr_object(self): """Creates an XDR Operation object that represents this :class:`ManageData`. """ data_name = bytearray(self.data_name, encoding='utf-8') if self.data_value is not None: if isinstance(self.data_value, bytes): data_value = [byt...

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37.5

16.944444

def register_uri_backend(uri_scheme, create_method, module, c14n_uri_method, escape, cast, is_connected): """ This method is intended to be used by backends only. It lets them register their services, identified by the URI scheme, at import time. The associated method create_method must take one pa...

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57.444444

30.422222

def parse_ACCT(chunk, encryption_key): """ Parses an account chunk, decrypts and creates an Account object. May return nil when the chunk does not represent an account. All secure notes are ACCTs but not all of them strore account information. """ # TODO: Make a test case that covers secure ...

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38.645161

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def write_autoconf(self, filename, header="/* Generated by Kconfiglib (https://github.com/ulfalizer/Kconfiglib) */\n"): r""" Writes out symbol values as a C header file, matching the format used by include/generated/autoconf.h in the kernel. The ordering of the #d...

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46.066667

22.933333

def get_remote_evb_mode(self, tlv_data): """Returns the EVB mode in the TLV. """ ret, parsed_val = self._check_common_tlv_format( tlv_data, "mode:", "EVB Configuration TLV") if not ret: return None mode_val = parsed_val[1].split()[0].strip() return mode_va...

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39.25

12.125

def _imm_trans_setattr(self, name, value): ''' An immutable's transient setattr allows params to be set, and runs checks as they are. ''' params = _imm_param_data(self) dd = object.__getattribute__(self, '__dict__') if name in params: (_, tx_fn, arg_lists, check_fns, deps) = params[name]...

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45.305556

22.916667

def add_selector(name): """ Builds and registers a :class:`Selector` object with the given name and configuration. Args: name (str): The name of the selector. Yields: SelectorFactory: The factory that will build the :class:`Selector`. """ factory = SelectorFactory(name) yi...

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26.071429

22.928571

def exists(self): """ :return: True if the submodule exists, False otherwise. Please note that a submodule may exist (in the .gitmodules file) even though its module doesn't exist on disk""" # keep attributes for later, and restore them if we have no valid data # ...

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37.433333

18.2

def detect_r_peaks(ecg_signal, sample_rate, time_units=False, volts=False, resolution=None, device="biosignalsplux", plot_result=False): """ ----- Brief ----- Python implementation of R peak detection algorithm (proposed by Raja Selvaraj). ----------- Description ----...

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37.975

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def ms_zoom(self, viewer, event, data_x, data_y, msg=True): """Zoom the image by dragging the cursor left or right. """ if not self.canzoom: return True msg = self.settings.get('msg_zoom', msg) x, y = self.get_win_xy(viewer) if event.state == 'move': ...

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30

16.285714

def _queue_management_worker(executor_reference, processes, pending_work_items, work_ids_queue, call_queue, result_queue): """Manages the communication between this proces...

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45.769231

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def enrich(self, studyAreas, dataCollections=None, analysisVariables=None, addDerivativeVariables="all", studyAreasOptions=None, useData=None, intersectingGeographies=None, returnGeometry=False, ...

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55.064516

22.467742

def convert_schema(self, nuc_tuple, inner_sat_tuples, outer_sat_tuples): """subtrees are represented as (tree, linear tree position) tuples. returns relation as root node. """ nuc_tree, nuc_pos = nuc_tuple sat_tuples = inner_sat_tuples + outer_sat_tuples last_sat_tuple_p...

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42.142857

20.52381

def _run(): """Entry point for package and cli uses""" args = parse_args() # parse custom parameters custom_meta = None if args.custom_meta: print "Adding custom parameters:" custom_meta = {} try: for item in args.custom_meta.split(','): key, val...

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39.454545

19.863636

def convert_tree_to_newick(tree, otu_group, label_key, leaf_labels, needs_quotes_pattern=NEWICK_NEEDING_QUOTING, subtree_id=None, bracket_ingroup=False): ...

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43.7

13.975

def closest(self, coords=[], **kwargs): """Snaps coordinate(s) to closest coordinate in Dataset Args: coords: List of coordinates expressed as tuples **kwargs: Coordinates defined as keyword pairs Returns: List of tuples of the snapped coordinates R...

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38.586207

21.689655

def do_chunked_gzip(infh, outfh, filename): """ A memory-friendly way of compressing the data. """ import gzip gzfh = gzip.GzipFile('rawlogs', mode='wb', fileobj=outfh) if infh.closed: infh = open(infh.name, 'r') else: infh.seek(0) readsize = 0 sys.stdout.w...

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25.705882

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def convert_column(data, schemae): """Convert known types from primitive to rich.""" ctype = schemae.converted_type if ctype == parquet_thrift.ConvertedType.DECIMAL: scale_factor = Decimal("10e-{}".format(schemae.scale)) if schemae.type == parquet_thrift.Type.INT32 or schemae.type == parquet...

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55.96875

19.8125

def greplines(lines, regexpr_list, reflags=0): """ grepfile - greps a specific file TODO: move to util_str, rework to be core of grepfile """ found_lines = [] found_lxs = [] # Ensure a list islist = isinstance(regexpr_list, (list, tuple)) islist2 = isinstance(reflags, (list, tuple))...

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34.925

13.225

def biclique_size(self, xmin, xmax, ymin, ymax): """Returns the size parameters ``(m,n)`` of the complete bipartite graph :math:`K_{m,n}` comprised of ``m`` unbroken chains of horizontally-aligned qubits and ``n`` unbroken chains of vertically-aligned qubits (known as line bundles) ...

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45.269231

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def _bcrypt_interpret_ec_key_blob(key_type, blob_struct, blob): """ Take a CNG BCRYPT_ECCKEY_BLOB and converts it into an ASN.1 structure :param key_type: A unicode string of "private" or "public" :param blob_struct: An instance of BCRYPT_ECCKEY_BLOB :param blob: A byte st...

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31.594203

20.057971

def show_dependencies(self, stream=sys.stdout): """Writes to the given stream the ASCII representation of the dependency tree.""" def child_iter(node): return [d.node for d in node.deps] def text_str(node): return colored(str(node), color=node.status.color_opts["color"])...

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42.2

18.3

def get_vpc_dict(): """Returns dictionary of named VPCs {name: vpc} Assert fails if there's more than one VPC with same name.""" client = get_ec2_client() response = client.describe_vpcs() assert is_good_response(response) result = OrderedDict() ec2 = get_ec2_resource() for vpc_response in response['...

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28.652174

20.086957

def increment_error(self, error: Exception): '''Increment the error counter preferring base exceptions.''' _logger.debug('Increment error %s', error) for error_class in ERROR_PRIORITIES: if isinstance(error, error_class): self.errors[error_class] += 1 ...

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35.7

15.9

def _delete(self, namespace, stream, start_id, end_time, configuration): """ Delete events for `stream` between `start_id` and `end_time`. `stream` : The stream to delete events for. `start_id` : Delete events with id > `start_id`. `end_time` : Delete events ending <= `end_time`. `configuration`...

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50.071429

16.214286

def required_attributes(self): """tuple: The schema's required attributed. """ # Deprecate warnings.warn( 'Property "package.required_attributes" is deprecated.', UserWarning) required = () # Get required try: if self.profile....

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25.166667

19.611111

def string_to_transition(s): """s is a string of the form a,b or a,b->c,d""" from .machines import Transition s = lexer(s) lhs = parse_multiple(s, parse_store) if s.pos < len(s) and s.cur == "->": s.pos += 1 rhs = parse_multiple(s, parse_store) else: rhs = () parse_en...

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28.75

12.833333

def after_run(self, remote_file_data): """ Save uuid of file to our LocalFile :param remote_file_data: dict: DukeDS file data """ if self.file_upload_post_processor: self.file_upload_post_processor.run(self.settings.data_service, remote_file_data) remote_file_...

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46.8

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def visit_Assign(self, node): """ In case of assignment assign value depend on r-value type dependencies. It is valid for subscript, `a[i] = foo()` means `a` type depend on `foo` return type. """ value_deps = self.visit(node.value) for target in node.targets: ...

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def download(url, directory, filename=None): """ Download a file and return its filename on the local file system. If the file is already there, it will not be downloaded again. The filename is derived from the url if not provided. Return the filepath. """ if not filename: _, filename = ...

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def compute(self, runner_results, setup=False, poll=False, ignore_errors=False): ''' walk through all results and increment stats ''' for (host, value) in runner_results.get('contacted', {}).iteritems(): if not ignore_errors and (('failed' in value and bool(value['failed'])) or ...

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def send_body(self, data): """Send the response body. ``data`` should be a bytes-like object or a string. """ if type(data) is str: data = data.encode() self.connection.writer.write(data) yield from self.connection.writer.drain()

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def bootstrap_params(rv_cont, data, n_iter=5, **kwargs): """Bootstrap the fit params of a distribution. Parameters ========== rv_cont: scipy.stats.rv_continuous instance The distribution which to fit. data: array-like, 1d The data on which to fit. n_iter: int [default=10] ...

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def OAuthClient( domain, consumer_key, consumer_secret, token, token_secret, user_agent=None, request_encoder=default_request_encoder, response_decoder=default_response_decoder ): """Creates a Freshbooks client for a freshbooks domain, using OAuth. Token management is assumed to ...

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def from_traceback(cls, tb): """ Construct a Bytecode from the given traceback """ while tb.tb_next: tb = tb.tb_next return cls(tb.tb_frame.f_code, current_offset=tb.tb_lasti)

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def compare_results(save, best_hsp, tmp_results, tmp_gene_split): ''' Function for comparing hits and saving only the best hit ''' # Get data for comparison hit_id = best_hsp['hit_id'] new_start_query = best_hsp['query_start'] new_end_query = best_hsp['query_end'] new_start_sbjct = int(best_hsp['sbjct...

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def _handle_for(self, node, scope, ctxt, stream): """Handle For nodes :node: TODO :scope: TODO :ctxt: TODO :stream: TODO :returns: TODO """ self._dlog("handling for") if node.init is not None: # perform the init self._hand...

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def default_commit_veto(request, response): """ When used as a commit veto, the logic in this function will cause the transaction to be aborted if: - An ``X-Tm`` response header with the value ``abort`` (or any value other than ``commit``) exists. - The response status code starts with ``4``...

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def asString(self): """ Returns this query with an AsString function added to it. :return <Query> """ q = self.copy() q.addFunction(Query.Function.AsString) return q

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def check(self, key, value): """Check whether key,value pair is allowed. The key is allowed if there is a corresponding key in the defaults class attribute dict. The value is not allowed if it is a dict in the defaults dict and not a dict in value. Parameters ---------- ...

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43.777778

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def check_reaction(reactants, products): """Check the stoichiometry and format of chemical reaction used for folder structure. list of reactants -> list of products """ reactant_list = [reactant.split('@')[0].strip( 'star').strip('gas') for reactant in reactants] product_list = [product....

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def edit(self, **kwargs): """ Modify this calendar event. :calls: `PUT /api/v1/calendar_events/:id \ <https://canvas.instructure.com/doc/api/calendar_events.html#method.calendar_events_api.update>`_ :rtype: :class:`canvasapi.calendar_event.CalendarEvent` """ res...

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33.315789

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def flavor_access_remove(flavor_id, project_id, profile=None, **kwargs): ''' Remove a project from the flavor access list CLI Example: .. code-block:: bash salt '*' nova.flavor_access_remove flavor_id=fID project_id=pID ''' conn = _auth(profile, **kwargs) return conn.flavor_access...

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28.25

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def diff(self, source_path='', target_path='', which=-1): """Build the diff between original docstring and proposed docstring. :type which: int -> -1 means all the dosctrings of the file -> >=0 means the index of the docstring to proceed (Default value = -1) :param source_pa...

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43.307692

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def _compile_aggregation_expression(self, expr: Expression, scope: Dict[str, TensorFluent], batch_size: Optional[int] = None, noise: Optional[List[tf.Tensor]] =...

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35.5

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def smallest_flagged(heap, row): """Search the heap for the smallest element that is still flagged. Parameters ---------- heap: array of shape (3, n_samples, n_neighbors) The heaps to search row: int Which of the heaps to search Returns ------- index: int T...

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22.388889

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def _simulate_stack(code: list) -> int: """ Simulates the actions of the stack, to check safety. This returns the maximum needed stack. """ max_stack = 0 curr_stack = 0 def _check_stack(ins): if curr_stack < 0: raise CompileError("Stack turned negative on instruction: ...

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def add_consumer(self, consumer): """Add another consumer from a :class:`Consumer` instance.""" consumer.backend = self.backend self.consumers.append(consumer)

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45

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def factory(cfg, login, pswd, request_type): """ Instantiate ImportRequest :param cfg: request configuration, should consist of request description (url and parameters) and response for parsing result :param login: :param pswd: :param request_type: TYPE_GET_SINGLE_OBJECT ...

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48.8

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def from_dict(config_cls, dictionary, validate=False): """ Loads an instance of ``config_cls`` from a dictionary. :param type config_cls: The class to build an instance of :param dict dictionary: The dictionary to load from :param bool validate: Preforms validation before building ``config_cls``, ...

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39.25

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def _init_glyph(self, plot, mapping, properties, key): """ Returns a Bokeh glyph object. """ properties = mpl_to_bokeh(properties) plot_method = '_'.join(key.split('_')[:-1]) renderer = getattr(plot, plot_method)(**dict(properties, **mapping)) return renderer, ren...

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40.5

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def showinfo(title=None, message=None, **options): """Original doc: Show an info message""" return psidialogs.message(title=title, message=message)

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51

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async def __handle_ping(self, _ : Ping): """ Handle a Ping message. Pong the backend """ self.__last_ping = time.time() await ZMQUtils.send(self.__backend_socket, Pong())

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47.75

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def execute(self, compiled=None, path=None, use_eval=False, allow_show=True): """Execute compiled code.""" self.check_runner() if compiled is not None: if allow_show and self.show: print(compiled) if path is not None: # path means header is included, and ...

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55.3

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def _create_sequences(self): '''Get all of the Sequences - Rosetta, ATOM, SEQRES, FASTA, UniParc.''' # Create the Rosetta sequences and the maps from the Rosetta sequences to the ATOM sequences try: self.pdb.construct_pdb_to_rosetta_residue_map(self.rosetta_scripts_path, rosetta_dat...

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55.277778

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def what(self): """ May return a 'postponed' or 'rescheduled' string depending what the start and finish time of the event has been changed to. """ originalFromDt = dt.datetime.combine(self.except_date, timeFrom(self.overrides.time_fro...

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52.05

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def configure_logging(args): """Logging to console""" log_format = logging.Formatter('%(levelname)s:%(name)s:line %(lineno)s:%(message)s') log_level = logging.INFO if args.verbose else logging.WARN log_level = logging.DEBUG if args.debug else log_level console = logging.StreamHandler() console.s...

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42.857143

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def downvote(self): """ Downvote the currently selected item. """ data = self.get_selected_item() if 'likes' not in data: self.term.flash() elif getattr(data['object'], 'archived'): self.term.show_notification("Voting disabled for archived post", s...

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38.631579

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def set_public_domain(self, public_domain=None): """Sets the public domain flag. :param public_domain: the public domain status :type public_domain: ``boolean`` :raise: ``NoAccess`` -- ``Metadata.isReadOnly()`` is ``true`` *compliance: mandatory -- This method must be implement...

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36.578947

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def iter_chunks(chunksize, *iterables): """Iterates over zipped iterables in chunks.""" iterables = iter(zip(*iterables)) while 1: chunk = tuple(islice(iterables, chunksize)) if not chunk: return yield chunk

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def formfield(self, **kwargs): """ Provide the custom form widget for the admin, since there isn't a form field mapped to ``GenericRelation`` model fields. """ from yacms.generic.forms import KeywordsWidget kwargs["widget"] = KeywordsWidget return super(KeywordsFi...

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42.875

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def create(**data): """ Create a customer. :param data: data required to create the customer :return: The customer resource :rtype resources.Customer """ http_client = HttpClient() response, _ = http_client.post(routes.url(routes.CUSTOMER_RESOURCE), data...

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29.666667

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def setShowLanguage(self, state): """ Sets the display mode for this widget to the inputed mode. :param state | <bool> """ if state == self._showLanguage: return self._showLanguage = state self.setDirty()

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def remove(self, path): """ Remove the file at the given path. This only works on files; for removing folders (directories), use L{rmdir}. @param path: path (absolute or relative) of the file to remove @type path: str @raise IOError: if the path refers to a folder (dir...

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34.692308

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def __validation_callback(self, event): # type: (str) -> Any """ Specific handling for the ``@ValidateComponent`` and ``@InvalidateComponent`` callback, as it requires checking arguments count and order :param event: The kind of life-cycle callback (in/validation) ...

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34.179487

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def make_innermost_setter(setter): """Wraps a setter so it applies to the inner-most results in `kernel_results`. The wrapped setter unwraps `kernel_results` and applies `setter` to the first results without an `inner_results` attribute. Args: setter: A callable that takes the kernel results as well as so...

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32.3

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def release_job(self, job_id, pri=65536, delay=0): """Put a job back on the queue to be processed (indicating that you've aborted it) You can only release a job which you have reserved using :func:`reserve_job()` or :func:`reserve_iter()`. :param job_id: Job ID to return :param pri: Ne...

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47.4375

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def build_ordered_cliques(cliques, next_cliques): """Order the new cliques based on the order of their ancestors in the previous iteration.""" def sort_key(clique): return -len(clique[1]) if not cliques: return list(sorted( list(next_cliques.values())[0].items(), ...

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30.52

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def load(path, size=None): """ Args: size (int): total number of records. If not provided, the returned dataflow will have no `__len__()`. It's needed because this metadata is not stored in the TFRecord file. """ gen = tf.python_io.tf_record_iterator(path) ...

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38.416667

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def object_url(self, object_t, object_id=None, relation=None, **kwargs): """ Helper method to build the url to query to access the object passed as parameter :raises TypeError: if the object type is invalid """ if object_t not in self.objects_types: raise Typ...

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41.769231

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def get_board_mapping_parent_items(self, team_context, child_backlog_context_category_ref_name, workitem_ids): """GetBoardMappingParentItems. [Preview API] Returns the list of parent field filter model for the given list of workitem ids :param :class:`<TeamContext> <azure.devops.v5_0.work.models...

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53.918919

25.405405

def computeMultipleExpectations(self, A_in, u_n, compute_uncertainty=True, compute_covariance=False, uncertainty_method=None, warning_cutoff=1.0e-10, return_theta=False): """Compute the expectations of multiple observables of phase space functions. Compute the expect...

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def _parse_build(encoded_data, pointer=0, spec=None, spec_params=None, strict=False): """ Parses a byte string generically, or using a spec with optional params :param encoded_data: A byte string that contains BER-encoded data :param pointer: The index in the byte string to parse from ...

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def call_hook(self, name, **kwargs): """ Call all hooks registered with this name. Returns a list of the returns values of the hooks (in the order the hooks were added)""" return [y for y in [x(**kwargs) for x, _ in self._hooks.get(name, [])] if y is not None]

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def _set_prompt(self): """Set prompt so it displays the current working directory.""" self.cwd = os.getcwd() self.prompt = Fore.CYAN + '{!r} $ '.format(self.cwd) + Fore.RESET

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def expand_alias(self, line): """ Expand an alias in the command line Returns the provided command line, possibly with the first word (command) translated according to alias expansion rules. [ipython]|16> _ip.expand_aliases("np myfile.txt") <16> 'q:/opt/np/notepad++.ex...

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def output_datacenter(gandi, datacenter, output_keys, justify=14): """ Helper to output datacenter information.""" output_generic(gandi, datacenter, output_keys, justify) if 'dc_name' in output_keys: output_line(gandi, 'datacenter', datacenter['name'], justify) if 'status' in output_keys: ...

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def setup_logging(name): """Setup logging according to environment variables.""" logger = logging.getLogger(__name__) if 'NVIM_PYTHON_LOG_FILE' in os.environ: prefix = os.environ['NVIM_PYTHON_LOG_FILE'].strip() major_version = sys.version_info[0] logfile = '{}_py{}_{}'.format(prefix,...

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def bundles(): """Display bundles.""" per_page = int(request.args.get('per_page', 30)) page = int(request.args.get('page', 1)) query = store.bundles() query_page = query.paginate(page, per_page=per_page) data = [] for bundle_obj in query_page.items: bundle_data = bundle_obj.to_dict(...

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def enable_cache(self): """ Enable client-side caching for the current request """ self.set_header('Cache-Control', 'max-age=%d, public' % self.CACHE_TIME) now = datetime.datetime.now() expires = now + datetime.timedelta(seconds=self.CACHE_TIME) self.set_header('Expires', expire...

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def get_quality_options(self, channel): """Get the available quality options for streams of the given channel Possible values in the list: * source * high * medium * low * mobile * audio :param channel: the channel or channel name ...

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def _discover_params(cls): """ Returns a dict where filter keyword is key, and class is value. To handle param alias (maxRecords or max_records), both versions are added. """ try: return cls.filters except AttributeError: filters...

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def __split_procedure(self, split_node): """! @brief Starts node splitting procedure in the CF-tree from the specify node. @param[in] split_node (cfnode): CF-tree node that should be splitted. """ if (split_node is self.__root): self.__root =...

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def create(self, name, nopassword=None, secret=None, encryption=None): """Creates a new user on the local system. Creating users requires either a secret (password) or the nopassword keyword to be specified. Args: name (str): The name of the user to craete nopa...

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def add_task(self, cor, name=None, finalizer=None, stop_timeout=1.0, parent=None): """Schedule a task to run on the background event loop. This method will start the given coroutine as a task and keep track of it so that it can be properly shutdown which the event loop is stopped. ...

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def DeletePendingNotification(self, timestamp): """Deletes the pending notification with the given timestamp. Args: timestamp: The timestamp of the notification. Assumed to be unique. Raises: UniqueKeyError: Raised if multiple notifications have the timestamp. """ shown_notifications =...

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def signRequest(self, req: Request, identifier: Identifier=None) -> Request: """ Signs request. Modifies reqId and signature. May modify identifier. :param req: request :param requestIdStore: request id generator :param identifier: signer ...

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def cublasCgemv(handle, trans, m, n, alpha, A, lda, x, incx, beta, y, incy): """ Matrix-vector product for complex general matrix. """ status = _libcublas.cublasCgemv_v2(handle, _CUBLAS_OP[trans], m, n, ctypes.byref(cuda.cuF...

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def _fadn_par(vec, geom): """First non-zero Atomic Displacement that is Non-Parallel with Vec Utility function to identify the first atomic displacement in a geometry that is both (a) not the zero vector and (b) non-(anti-)parallel with a reference vector. Parameters ---------- vec ...

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def dict_fun(data, function): """ Apply a function to all values in a dictionary, return a dictionary with results. Parameters ---------- data : dict a dictionary whose values are adequate input to the second argument of this function. function : function a function...

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def bin_to_edge_slice(s, n): """ Convert a bin slice into a bin edge slice. """ s = canonify_slice(s, n) start = s.start stop = s.stop if start > stop: _stop = start + 1 start = stop + 1 stop = _stop start = max(start - 1, 0) step = abs(s.step) if stop <= ...

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def filter_source(self, source): # pylint: disable=R0911,R0912 """ Apply filters to ``source`` and return ``True`` if uncertainty should be applied to it. """ for key, value in self.filters.items(): if key == 'applyToTectonicRegionType': if val...

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def screenshot(filename="screenshot.png"): """ Save a screenshot of the current rendering window. """ if not settings.plotter_instance.window: colors.printc('~bomb screenshot(): Rendering window is not present, skip.', c=1) return w2if = vtk.vtkWindowToImageFilter() w2if.ShouldRe...

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def complete_contexts(self): ''' Returns a list of context interfaces that yield a complete context. ''' interfaces = [] [interfaces.extend(i.complete_contexts()) for i in six.itervalues(self.templates)] return interfaces

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def human_xor_00(X, y, model_generator, method_name): """ XOR (false/false) This tests how well a feature attribution method agrees with human intuition for an eXclusive OR operation combined with linear effects. This metric deals specifically with the question of credit allocation for the following fu...

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def tensor_to_6component(tensor, frame='USE'): ''' Returns a tensor to six component vector [Mrr, Mtt, Mpp, Mrt, Mrp, Mtp] ''' if 'NED' in frame: tensor = ned_to_use(tensor) return [tensor[0, 0], tensor[1, 1], tensor[2, 2], tensor[0, 1], tensor[0, 2], tensor[1, 2]]

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def filter(self): """Get the query of this Query. The device query :return: The query of this Query. :rtype: dict """ if isinstance(self._filter, str): return self._decode_query(self._filter) return self._filter

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def _check_version(self, major, minor): """ Check if the detected bugzilla version is >= passed major/minor pair. """ if major < self.bz_ver_major: return True if (major == self.bz_ver_major and minor <= self.bz_ver_minor): return True return False

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