chrom stringclasses 12
values | pos int64 36.1k 249M | ref stringclasses 4
values | alt stringclasses 4
values | label bool 2
classes | subset stringclasses 8
values | match_group int64 0 2.16k | rsid stringlengths 3 15 | pip float64 0 1 | traits stringclasses 279
values | MAF float64 0 0.5 | ld_score float64 1.01 3.79k | consequence stringclasses 13
values | consequence_cre stringclasses 29
values | exon_closest_pc_gene_id stringlengths 15 15 | distance_exon_pc int64 0 1.68M | exon_closest_nc_gene_id stringlengths 15 15 | distance_exon_nc int64 0 507k | distance_exon int64 0 507k | exon_closest_gene_id stringlengths 15 15 | consequence_final stringclasses 28
values | tss_closest_pc_gene_id stringlengths 15 15 | distance_tss_pc int64 0 1.69M | tss_closest_nc_gene_id stringlengths 15 15 | distance_tss_nc int64 0 531k | distance_tss int64 0 531k | tss_closest_gene_id stringlengths 15 15 | consequence_group stringclasses 8
values | distance_tss_pc_bin stringclasses 4
values | distance_exon_pc_bin stringclasses 7
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
11 | 27,379,170 | C | T | false | non_coding_transcript_exon_variant | 354 | rs2472625 | 0.000095 | 0.371 | 127.61 | non_coding_transcript_exon_variant | non_coding_transcript_exon_variant | ENSG00000205213 | 401 | ENSG00000205213 | 0 | 0 | ENSG00000205213 | non_coding_transcript_exon_variant | ENSG00000109881 | 15,935 | ENSG00000205213 | 12 | 12 | ENSG00000205213 | non_coding_transcript_exon_variant | NA | NA | |
11 | 27,381,649 | C | T | false | distal | 357 | rs2472621 | 0.004618 | 0.2929 | 146.99 | intron_variant | dELS_flank | ENSG00000205213 | 538 | ENSG00000205213 | 2,465 | 538 | ENSG00000205213 | dELS_flank | ENSG00000109881 | 18,414 | ENSG00000205213 | 2,465 | 2,465 | ENSG00000205213 | distal | NA | NA | |
11 | 27,472,332 | C | G | false | 5_prime_UTR_variant | 283 | rs11541599 | 0.000321 | 0.2008 | 175.04 | 5_prime_UTR_variant | 5_prime_UTR_variant | ENSG00000205213 | 0 | ENSG00000254862 | 445 | 0 | ENSG00000205213 | 5_prime_UTR_variant | ENSG00000205213 | 17 | ENSG00000254862 | 533 | 17 | ENSG00000205213 | 5_prime_UTR_variant | NA | NA | |
11 | 29,253,308 | G | A | true | distal | 386 | rs9666824 | 0.998435 | EduYears | 0.22521 | 126.07 | intron_variant | intron_variant | ENSG00000182255 | 756,421 | ENSG00000254526 | 7,744 | 7,744 | ENSG00000254526 | intron_variant | ENSG00000182255 | 763,721 | ENSG00000255450 | 22,346 | 22,346 | ENSG00000255450 | distal | NA | NA |
11 | 30,022,683 | A | G | false | distal | 358 | rs552769 | 0.000073 | 0.4153 | 103.46 | intergenic_variant | dELS_flank | ENSG00000182255 | 5,652 | ENSG00000182255 | 6,323 | 5,652 | ENSG00000182255 | dELS_flank | ENSG00000182255 | 5,652 | ENSG00000182255 | 6,323 | 5,652 | ENSG00000182255 | distal | NA | NA | |
11 | 30,037,662 | T | C | false | distal | 395 | rs554948 | 0.000148 | 0.20227 | 106.38 | intergenic_variant | CA | ENSG00000182255 | 20,631 | ENSG00000254532 | 6,390 | 6,390 | ENSG00000254532 | CA | ENSG00000182255 | 20,631 | ENSG00000182255 | 21,302 | 20,631 | ENSG00000182255 | distal | NA | NA | |
11 | 30,312,676 | C | T | false | distal | 402 | rs1856142 | 0.001344 | 0.26407 | 233.12 | intron_variant | CA-TF | ENSG00000152219 | 10,427 | ENSG00000254532 | 4,213 | 4,213 | ENSG00000254532 | CA-TF | ENSG00000152219 | 10,427 | ENSG00000254532 | 10,311 | 10,311 | ENSG00000254532 | distal | NA | NA | |
11 | 30,316,728 | T | A | false | distal | 341 | rs10767835 | 0.000312 | 0.42563 | 254.73 | intron_variant | dELS | ENSG00000152219 | 6,375 | ENSG00000254532 | 161 | 161 | ENSG00000254532 | dELS | ENSG00000152219 | 6,375 | ENSG00000254532 | 6,259 | 6,259 | ENSG00000254532 | distal | NA | NA | |
11 | 30,316,845 | T | C | false | distal | 341 | rs10767836 | 0.000312 | 0.42563 | 254.72 | intron_variant | dELS | ENSG00000152219 | 6,258 | ENSG00000254532 | 44 | 44 | ENSG00000254532 | dELS | ENSG00000152219 | 6,258 | ENSG00000254532 | 6,142 | 6,142 | ENSG00000254532 | distal | NA | NA | |
11 | 30,347,009 | G | A | false | distal | 369 | rs529963254 | 0.000084 | 0.002673 | 17.199 | intergenic_variant | intergenic_variant | ENSG00000152219 | 8,785 | ENSG00000152219 | 14,067 | 8,785 | ENSG00000152219 | intergenic_variant | ENSG00000152219 | 18,972 | ENSG00000152219 | 15,364 | 15,364 | ENSG00000152219 | distal | NA | NA | |
11 | 30,426,451 | C | T | true | tss_proximal | 390 | rs704660 | 0.99511 | Height | 0.4097 | 135.77 | intron_variant | pELS_flank | ENSG00000066382 | 8,817 | ENSG00000255480 | 834 | 834 | ENSG00000255480 | tss_proximal | ENSG00000152219 | 98,414 | ENSG00000255480 | 898 | 898 | ENSG00000255480 | tss_proximal | tss_prox:b2 | tss_prox:b2 |
11 | 30,564,370 | T | A | false | distal | 360 | rs76340187 | 0.000259 | 0.003174 | 18.635 | intron_variant | dELS_flank | ENSG00000066382 | 15,875 | ENSG00000066382 | 15,875 | 15,875 | ENSG00000066382 | dELS_flank | ENSG00000066382 | 21,910 | ENSG00000254489 | 19,741 | 19,741 | ENSG00000254489 | distal | NA | NA | |
11 | 30,564,673 | C | T | false | distal | 360 | rs188693723 | 0.000078 | 0.003377 | 7.1679 | intron_variant | dELS_flank | ENSG00000066382 | 15,572 | ENSG00000066382 | 15,572 | 15,572 | ENSG00000066382 | dELS_flank | ENSG00000066382 | 21,607 | ENSG00000254489 | 19,438 | 19,438 | ENSG00000254489 | distal | NA | NA | |
11 | 30,565,024 | A | G | false | distal | 360 | rs78507236 | 0.000115 | 0.009217 | 29.795 | intron_variant | dELS_flank | ENSG00000066382 | 15,221 | ENSG00000066382 | 15,221 | 15,221 | ENSG00000066382 | dELS_flank | ENSG00000066382 | 21,256 | ENSG00000254489 | 19,087 | 19,087 | ENSG00000254489 | distal | NA | NA | |
11 | 30,727,543 | T | C | true | distal | 328 | rs963837 | 1 | Hb,Ht,P,RBC,UA,Urea,eGFR,eGFRcys,sCr | 0.4529 | 88.12 | intergenic_variant | dELS | ENSG00000170959 | 136,059 | ENSG00000287373 | 46,369 | 46,369 | ENSG00000287373 | dELS | ENSG00000066382 | 140,670 | ENSG00000287373 | 46,369 | 46,369 | ENSG00000287373 | distal | NA | NA |
11 | 30,727,622 | T | C | true | distal | 329 | rs369062552 | 0.93758 | P | 0.040631 | 33.204 | intergenic_variant | dELS | ENSG00000170959 | 135,980 | ENSG00000287373 | 46,290 | 46,290 | ENSG00000287373 | dELS | ENSG00000066382 | 140,749 | ENSG00000287373 | 46,290 | 46,290 | ENSG00000287373 | distal | NA | NA |
11 | 30,730,408 | C | T | false | distal | 328 | rs685270 | 0.005208 | 0.43387 | 115.41 | intergenic_variant | dELS | ENSG00000170959 | 133,194 | ENSG00000287373 | 43,504 | 43,504 | ENSG00000287373 | dELS | ENSG00000066382 | 143,535 | ENSG00000287373 | 43,504 | 43,504 | ENSG00000287373 | distal | NA | NA | |
11 | 30,931,801 | C | A | false | missense_variant | 299 | rs147574605 | 0.000051 | 0.005042 | 10.181 | missense_variant | missense_variant | ENSG00000170959 | 0 | ENSG00000170959 | 0 | 0 | ENSG00000170959 | missense_variant | ENSG00000170959 | 60,884 | ENSG00000170959 | 6,392 | 6,392 | ENSG00000170959 | missense_variant | NA | NA | |
11 | 31,241,565 | A | G | false | missense_variant | 298 | rs2616812 | 0.001326 | 0.3874 | 374.54 | missense_variant | missense_variant | ENSG00000170959 | 0 | ENSG00000170959 | 0 | 0 | ENSG00000170959 | missense_variant | ENSG00000170959 | 86,714 | ENSG00000170959 | 50 | 50 | ENSG00000170959 | missense_variant | NA | NA | |
11 | 31,350,790 | A | C | false | distal | 360 | rs556295886 | 0.000039 | 0.0017 | 18.907 | intron_variant | dELS_flank | ENSG00000170959 | 15,225 | ENSG00000170959 | 15,225 | 15,225 | ENSG00000170959 | dELS_flank | ENSG00000170959 | 18,948 | ENSG00000170959 | 19,019 | 18,948 | ENSG00000170959 | distal | NA | NA | |
11 | 31,351,242 | T | G | false | distal | 360 | rs72888171 | 0.000209 | 0.004976 | 21.095 | intron_variant | dELS_flank | ENSG00000170959 | 15,677 | ENSG00000170959 | 15,677 | 15,677 | ENSG00000170959 | dELS_flank | ENSG00000170959 | 18,496 | ENSG00000170959 | 18,567 | 18,496 | ENSG00000170959 | distal | NA | NA | |
11 | 31,509,553 | A | G | false | 5_prime_UTR_variant | 278 | rs2295748 | 0.000066 | 0.23075 | 416.97 | 5_prime_UTR_variant | 5_prime_UTR_variant | ENSG00000148950 | 0 | ENSG00000148950 | 0 | 0 | ENSG00000148950 | 5_prime_UTR_variant | ENSG00000148950 | 20 | ENSG00000148950 | 9 | 9 | ENSG00000148950 | 5_prime_UTR_variant | NA | NA | |
11 | 32,091,511 | A | G | false | tss_proximal | 355 | rs223045 | 0.00025 | 0.48504 | 61.835 | intron_variant | pELS | ENSG00000049449 | 60 | ENSG00000049449 | 5,022 | 60 | ENSG00000049449 | tss_proximal | ENSG00000049449 | 98 | ENSG00000049449 | 5,022 | 98 | ENSG00000049449 | tss_proximal | tss_prox:b0 | tss_prox:b0 | |
11 | 32,091,763 | G | A | false | 5_prime_UTR_variant | 284 | rs147568240 | 0.000284 | 0.008666 | 11.124 | 5_prime_UTR_variant | 5_prime_UTR_variant | ENSG00000049449 | 0 | ENSG00000049449 | 4,770 | 0 | ENSG00000049449 | 5_prime_UTR_variant | ENSG00000049449 | 152 | ENSG00000049449 | 4,770 | 152 | ENSG00000049449 | 5_prime_UTR_variant | NA | NA | |
11 | 32,411,901 | T | C | false | tss_proximal | 391 | rs5030228 | 0.000042 | 0.059027 | 145.48 | intron_variant | dELS_flank | ENSG00000184937 | 4,588 | ENSG00000184937 | 187 | 187 | ENSG00000184937 | tss_proximal | ENSG00000184937 | 5,695 | ENSG00000184937 | 362 | 362 | ENSG00000184937 | tss_proximal | tss_prox:b2 | tss_prox:b2 | |
11 | 32,411,998 | G | C | false | tss_proximal | 391 | rs16923250 | 0.000041 | 0.059016 | 145.47 | intron_variant | dELS | ENSG00000184937 | 4,491 | ENSG00000184937 | 90 | 90 | ENSG00000184937 | tss_proximal | ENSG00000184937 | 5,598 | ENSG00000184937 | 265 | 265 | ENSG00000184937 | tss_proximal | tss_prox:b2 | tss_prox:b2 | |
11 | 32,435,148 | C | A | false | synonymous_variant | 285 | rs2234582 | 0.003479 | 0.22424 | 151.51 | synonymous_variant | synonymous_variant | ENSG00000184937 | 0 | ENSG00000184937 | 0 | 0 | ENSG00000184937 | synonymous_variant | ENSG00000184937 | 211 | ENSG00000183242 | 369 | 211 | ENSG00000184937 | synonymous_variant | NA | NA | |
11 | 32,563,502 | A | C | false | distal | 324 | rs11031875 | 0.000023 | 0.03071 | 37.855 | intergenic_variant | dELS | ENSG00000149100 | 20,328 | ENSG00000149100 | 20,295 | 20,295 | ENSG00000149100 | dELS | ENSG00000149100 | 20,328 | ENSG00000149100 | 20,295 | 20,295 | ENSG00000149100 | distal | NA | NA | |
11 | 32,567,606 | G | C | false | distal | 337 | rs76252579 | 0.000325 | 0.042081 | 237.95 | intergenic_variant | dELS | ENSG00000149100 | 16,224 | ENSG00000149100 | 16,191 | 16,191 | ENSG00000149100 | dELS | ENSG00000149100 | 16,224 | ENSG00000149100 | 16,191 | 16,191 | ENSG00000149100 | distal | NA | NA | |
11 | 32,905,181 | A | T | false | distal | 319 | rs117500681 | 0.000084 | 0.022398 | 239.65 | intron_variant | dELS | ENSG00000060749 | 11,846 | ENSG00000060749 | 20,790 | 11,846 | ENSG00000060749 | dELS | ENSG00000060749 | 11,920 | ENSG00000060749 | 20,790 | 11,920 | ENSG00000060749 | distal | NA | NA | |
11 | 32,933,084 | G | A | false | missense_variant | 307 | rs750333325 | 0.000045 | 0.000246 | 57.281 | missense_variant | missense_variant | ENSG00000060749 | 0 | ENSG00000060749 | 7 | 0 | ENSG00000060749 | missense_variant | ENSG00000060749 | 1,499 | ENSG00000060749 | 6,374 | 1,499 | ENSG00000060749 | missense_variant | NA | NA | |
11 | 32,986,263 | C | T | false | distal | 395 | rs113416118 | 0.005743 | 0.19653 | 140.36 | intron_variant | CA | ENSG00000060749 | 5,992 | ENSG00000060749 | 2,037 | 2,037 | ENSG00000060749 | CA | ENSG00000121690 | 29,614 | ENSG00000200615 | 18,081 | 18,081 | ENSG00000200615 | distal | NA | NA | |
11 | 33,014,631 | G | A | false | distal | 346 | rs72901275 | 0.000103 | 0.19317 | 142.34 | intergenic_variant | pELS_flank | ENSG00000121690 | 1,246 | ENSG00000121690 | 1,244 | 1,244 | ENSG00000121690 | pELS_flank | ENSG00000121690 | 1,246 | ENSG00000121690 | 1,244 | 1,244 | ENSG00000121690 | distal | NA | NA | |
11 | 33,045,510 | G | A | false | distal | 366 | rs72902938 | 0.000034 | 0.028358 | 99.564 | intron_variant | dELS_flank | ENSG00000176148 | 1,573 | ENSG00000176148 | 1,397 | 1,397 | ENSG00000176148 | dELS_flank | ENSG00000176148 | 5,478 | ENSG00000176148 | 5,723 | 5,478 | ENSG00000176148 | distal | NA | NA | |
11 | 33,055,700 | A | G | false | distal | 327 | rs11032129 | 0.000088 | 0.26602 | 157.09 | intron_variant | dELS | ENSG00000176148 | 974 | ENSG00000176148 | 887 | 887 | ENSG00000176148 | dELS | ENSG00000176148 | 12,986 | ENSG00000176148 | 15,913 | 12,986 | ENSG00000176148 | distal | NA | NA | |
11 | 33,059,829 | A | G | false | distal | 327 | rs7125873 | 0.000086 | 0.26601 | 157.07 | intron_variant | dELS | ENSG00000176148 | 733 | ENSG00000176148 | 733 | 733 | ENSG00000176148 | dELS | ENSG00000176148 | 8,857 | ENSG00000280798 | 16,319 | 8,857 | ENSG00000176148 | distal | NA | NA | |
11 | 33,060,430 | A | G | false | distal | 327 | rs6484638 | 0.000086 | 0.26603 | 157.08 | intron_variant | dELS | ENSG00000176148 | 1,099 | ENSG00000176148 | 1,099 | 1,099 | ENSG00000176148 | dELS | ENSG00000176148 | 8,256 | ENSG00000280798 | 15,718 | 8,256 | ENSG00000176148 | distal | NA | NA | |
11 | 33,060,647 | C | T | false | distal | 327 | rs6484639 | 0.000086 | 0.26603 | 157.08 | intron_variant | dELS | ENSG00000176148 | 882 | ENSG00000176148 | 882 | 882 | ENSG00000176148 | dELS | ENSG00000176148 | 8,039 | ENSG00000280798 | 15,501 | 8,039 | ENSG00000176148 | distal | NA | NA | |
11 | 33,062,519 | A | G | false | distal | 326 | rs1407044 | 0.000086 | 0.26603 | 157.08 | intron_variant | dELS | ENSG00000176148 | 792 | ENSG00000176148 | 792 | 792 | ENSG00000176148 | dELS | ENSG00000176148 | 6,167 | ENSG00000280798 | 13,629 | 6,167 | ENSG00000176148 | distal | NA | NA | |
11 | 33,132,077 | C | A | false | distal | 321 | rs3117541 | 0.00203 | 0.31182 | 353.91 | intron_variant | dELS | ENSG00000176102 | 8,888 | ENSG00000176102 | 2,335 | 2,335 | ENSG00000176102 | dELS | ENSG00000176102 | 29,402 | ENSG00000176102 | 29,343 | 29,343 | ENSG00000176102 | distal | NA | NA | |
11 | 33,132,463 | G | A | false | distal | 321 | rs2475382 | 0.002015 | 0.31182 | 353.89 | intron_variant | dELS | ENSG00000176102 | 8,502 | ENSG00000176102 | 1,949 | 1,949 | ENSG00000176102 | dELS | ENSG00000176102 | 29,016 | ENSG00000176102 | 28,957 | 28,957 | ENSG00000176102 | distal | NA | NA | |
11 | 33,723,683 | C | T | false | tss_proximal | 382 | rs143860147 | 0.000058 | 0.010512 | 12.602 | intron_variant | pELS_flank | ENSG00000085063 | 653 | ENSG00000284969 | 1,215 | 653 | ENSG00000085063 | tss_proximal | ENSG00000085063 | 730 | ENSG00000284969 | 1,215 | 730 | ENSG00000085063 | tss_proximal | tss_prox:b1 | tss_prox:b1 | |
11 | 33,767,755 | G | A | false | distal | 388 | rs7127075 | 0.000166 | 0.056634 | 65.725 | intron_variant | intron_variant | ENSG00000110429 | 1,095 | ENSG00000110429 | 119 | 119 | ENSG00000110429 | intron_variant | ENSG00000110429 | 6,591 | ENSG00000110429 | 4,247 | 4,247 | ENSG00000110429 | distal | NA | NA | |
11 | 33,773,947 | C | T | false | 5_prime_UTR_variant | 282 | rs4755999 | 0.000041 | 0.012809 | 9.4151 | 5_prime_UTR_variant | 5_prime_UTR_variant | ENSG00000110429 | 0 | ENSG00000110429 | 231 | 0 | ENSG00000110429 | 5_prime_UTR_variant | ENSG00000110429 | 399 | ENSG00000110429 | 366 | 366 | ENSG00000110429 | 5_prime_UTR_variant | NA | NA | |
11 | 34,047,215 | C | A | false | distal | 318 | rs10768047 | 0.000196 | 0.18258 | 157.11 | intergenic_variant | dELS | ENSG00000135387 | 4,515 | ENSG00000286626 | 2,570 | 2,570 | ENSG00000286626 | dELS | ENSG00000135387 | 4,515 | ENSG00000135387 | 4,516 | 4,515 | ENSG00000135387 | distal | NA | NA | |
11 | 34,047,287 | G | A | false | distal | 318 | rs73486549 | 0.000172 | 0.18149 | 157.41 | intergenic_variant | dELS | ENSG00000135387 | 4,443 | ENSG00000286626 | 2,498 | 2,498 | ENSG00000286626 | dELS | ENSG00000135387 | 4,443 | ENSG00000135387 | 4,444 | 4,443 | ENSG00000135387 | distal | NA | NA | |
11 | 34,047,380 | A | G | false | distal | 318 | rs73486551 | 0.000173 | 0.18149 | 157.41 | intergenic_variant | dELS | ENSG00000135387 | 4,350 | ENSG00000286626 | 2,405 | 2,405 | ENSG00000286626 | dELS | ENSG00000135387 | 4,350 | ENSG00000135387 | 4,351 | 4,350 | ENSG00000135387 | distal | NA | NA | |
11 | 34,048,429 | T | C | false | distal | 318 | rs7925202 | 0.000172 | 0.18149 | 157.42 | intergenic_variant | dELS | ENSG00000135387 | 3,301 | ENSG00000286626 | 1,356 | 1,356 | ENSG00000286626 | dELS | ENSG00000135387 | 3,301 | ENSG00000135387 | 3,302 | 3,301 | ENSG00000135387 | distal | NA | NA | |
11 | 34,168,876 | G | A | false | distal | 320 | rs1569774 | 0.001373 | 0.418 | 78.45 | intron_variant | dELS | ENSG00000166016 | 883 | ENSG00000166016 | 4,297 | 883 | ENSG00000166016 | dELS | ENSG00000135372 | 60,666 | ENSG00000201867 | 20,297 | 20,297 | ENSG00000201867 | distal | NA | NA | |
11 | 34,356,834 | G | C | false | missense_variant | 309 | rs1925368 | 0.000192 | 0.060395 | 144.32 | missense_variant | missense_variant | ENSG00000166016 | 0 | ENSG00000254708 | 20,830 | 0 | ENSG00000166016 | missense_variant | ENSG00000166016 | 1,175 | ENSG00000254708 | 20,830 | 1,175 | ENSG00000166016 | missense_variant | NA | NA | |
11 | 34,407,259 | G | A | false | distal | 334 | rs12276378 | 0.000059 | 0.046915 | 145.35 | intergenic_variant | dELS | ENSG00000121691 | 31,674 | ENSG00000220204 | 2,309 | 2,309 | ENSG00000220204 | dELS | ENSG00000121691 | 31,674 | ENSG00000220204 | 2,309 | 2,309 | ENSG00000220204 | distal | NA | NA | |
11 | 34,603,652 | G | A | false | distal | 338 | rs72917910 | 0.000196 | 0.032664 | 17.281 | intergenic_variant | dELS | ENSG00000135373 | 17,440 | ENSG00000135373 | 17,440 | 17,440 | ENSG00000135373 | dELS | ENSG00000135373 | 17,440 | ENSG00000135373 | 17,440 | 17,440 | ENSG00000135373 | distal | NA | NA | |
11 | 34,604,207 | G | A | false | distal | 337 | rs113336889 | 0.000039 | 0.039543 | 21.367 | intergenic_variant | dELS | ENSG00000135373 | 16,885 | ENSG00000135373 | 16,885 | 16,885 | ENSG00000135373 | dELS | ENSG00000135373 | 16,885 | ENSG00000135373 | 16,885 | 16,885 | ENSG00000135373 | distal | NA | NA | |
11 | 34,631,476 | T | C | false | tss_proximal | 377 | rs11032793 | 0.001583 | 0.093494 | 20.745 | intron_variant | pELS | ENSG00000135373 | 987 | ENSG00000135373 | 10,247 | 987 | ENSG00000135373 | tss_proximal | ENSG00000135373 | 987 | ENSG00000135373 | 10,382 | 987 | ENSG00000135373 | tss_proximal | tss_prox:b1 | tss_prox:b1 | |
11 | 34,632,224 | T | G | true | tss_proximal | 377 | rs17358295 | 0.995095 | GGT | 0.10473 | 21.779 | intron_variant | pELS | ENSG00000135373 | 239 | ENSG00000135373 | 9,783 | 239 | ENSG00000135373 | tss_proximal | ENSG00000135373 | 239 | ENSG00000135373 | 9,952 | 239 | ENSG00000135373 | tss_proximal | tss_prox:b1 | tss_prox:b1 |
11 | 34,635,514 | C | T | false | distal | 358 | rs7127373 | 0.00059 | 0.42175 | 40.329 | intron_variant | dELS_flank | ENSG00000135373 | 2,861 | ENSG00000135373 | 6,493 | 2,861 | ENSG00000135373 | dELS_flank | ENSG00000135373 | 3,049 | ENSG00000135373 | 6,662 | 3,049 | ENSG00000135373 | distal | NA | NA | |
11 | 34,978,135 | G | C | false | missense_variant | 317 | rs35560997 | 0.001343 | 0.007759 | 19.594 | missense_variant | missense_variant | ENSG00000110435 | 0 | ENSG00000110435 | 0 | 0 | ENSG00000110435 | missense_variant | ENSG00000110435 | 350 | ENSG00000110435 | 199 | 199 | ENSG00000110435 | missense_variant | NA | NA | |
11 | 34,984,221 | A | T | false | tss_proximal | 375 | rs72914758 | 0.000063 | 0.34087 | 296.51 | intron_variant | TF_flank | ENSG00000110435 | 348 | ENSG00000110435 | 348 | 348 | ENSG00000110435 | tss_proximal | ENSG00000110435 | 6,436 | ENSG00000110435 | 411 | 411 | ENSG00000110435 | tss_proximal | tss_prox:b2 | tss_prox:b1 | |
11 | 34,986,531 | T | C | false | distal | 357 | rs2181876 | 0.008833 | 0.28536 | 360.94 | intron_variant | dELS_flank | ENSG00000110435 | 1,802 | ENSG00000110435 | 1,649 | 1,649 | ENSG00000110435 | dELS_flank | ENSG00000110435 | 8,746 | ENSG00000110435 | 1,897 | 1,897 | ENSG00000110435 | distal | NA | NA | |
11 | 34,987,539 | C | T | false | distal | 357 | rs2767044 | 0.008796 | 0.28601 | 362.12 | intron_variant | dELS_flank | ENSG00000110435 | 2,810 | ENSG00000110435 | 2,657 | 2,657 | ENSG00000110435 | dELS_flank | ENSG00000110435 | 9,754 | ENSG00000110435 | 2,905 | 2,905 | ENSG00000110435 | distal | NA | NA | |
11 | 34,987,656 | A | G | false | distal | 357 | rs2732562 | 0.008224 | 0.28598 | 362.14 | intron_variant | dELS_flank | ENSG00000110435 | 2,927 | ENSG00000110435 | 2,774 | 2,774 | ENSG00000110435 | dELS_flank | ENSG00000110435 | 9,871 | ENSG00000110435 | 3,022 | 3,022 | ENSG00000110435 | distal | NA | NA | |
11 | 35,204,608 | A | G | false | missense_variant | 289 | rs9666607 | 0.000387 | 0.32391 | 97.785 | missense_variant | missense_variant | ENSG00000026508 | 0 | ENSG00000026508 | 0 | 0 | ENSG00000026508 | missense_variant | ENSG00000026508 | 2,928 | ENSG00000026508 | 1,106 | 1,106 | ENSG00000026508 | missense_variant | NA | NA | |
11 | 35,215,257 | C | A | false | tss_proximal | 375 | rs1547060 | 0.000541 | 0.3386 | 102.01 | intron_variant | PLS_flank | ENSG00000026508 | 342 | ENSG00000255443 | 271 | 271 | ENSG00000255443 | tss_proximal | ENSG00000026508 | 4,086 | ENSG00000255443 | 271 | 271 | ENSG00000255443 | tss_proximal | tss_prox:b2 | tss_prox:b1 | |
11 | 35,223,096 | C | A | false | 3_prime_UTR_variant | 393 | rs11033031 | 0.000516 | 0.13463 | 120.19 | 3_prime_UTR_variant | 3_prime_UTR_variant | ENSG00000026508 | 0 | ENSG00000026508 | 1,363 | 0 | ENSG00000026508 | 3_prime_UTR_variant | ENSG00000026508 | 3,751 | ENSG00000026508 | 4,166 | 3,751 | ENSG00000026508 | 3_prime_UTR_variant | NA | NA | |
11 | 35,360,360 | T | A | false | tss_proximal | 378 | rs6484785 | 0.002063 | 0.24418 | 135.17 | intron_variant | pELS | ENSG00000110436 | 231 | ENSG00000110436 | 213 | 213 | ENSG00000110436 | tss_proximal | ENSG00000110436 | 231 | ENSG00000110436 | 213 | 213 | ENSG00000110436 | tss_proximal | tss_prox:b1 | tss_prox:b1 | |
11 | 35,463,827 | T | C | false | distal | 356 | rs11033135 | 0.000198 | 0.30948 | 99.097 | intron_variant | dELS_flank | ENSG00000149090 | 4,173 | ENSG00000149090 | 4,173 | 4,173 | ENSG00000149090 | dELS_flank | ENSG00000110436 | 43,763 | ENSG00000149090 | 27,601 | 27,601 | ENSG00000149090 | distal | NA | NA | |
11 | 35,464,497 | A | G | false | distal | 321 | rs11033136 | 0.000216 | 0.3095 | 99.128 | intron_variant | dELS | ENSG00000149090 | 3,503 | ENSG00000149090 | 3,503 | 3,503 | ENSG00000149090 | dELS | ENSG00000110436 | 44,433 | ENSG00000149090 | 28,271 | 28,271 | ENSG00000149090 | distal | NA | NA | |
11 | 35,464,689 | G | A | false | distal | 321 | rs7112485 | 0.00021 | 0.30947 | 99.13 | intron_variant | dELS | ENSG00000149090 | 3,311 | ENSG00000149090 | 3,311 | 3,311 | ENSG00000149090 | dELS | ENSG00000110436 | 44,625 | ENSG00000149090 | 28,463 | 28,463 | ENSG00000149090 | distal | NA | NA | |
11 | 35,499,181 | T | G | false | distal | 395 | rs2676460 | 0.000078 | 0.18863 | 38.193 | intron_variant | CA | ENSG00000149090 | 4,908 | ENSG00000149090 | 4,908 | 4,908 | ENSG00000149090 | CA | ENSG00000149090 | 26,421 | ENSG00000149090 | 26,415 | 26,415 | ENSG00000149090 | distal | NA | NA | |
11 | 35,527,483 | A | G | false | distal | 384 | rs55990649 | 0.00003 | 0.25688 | 48.819 | intron_variant | intron_variant | ENSG00000149090 | 1,451 | ENSG00000149090 | 1,885 | 1,451 | ENSG00000149090 | intron_variant | ENSG00000149090 | 1,451 | ENSG00000149090 | 1,885 | 1,451 | ENSG00000149090 | distal | NA | NA | |
11 | 35,619,880 | G | A | false | missense_variant | 293 | rs12286850 | 0.00003 | 0.000204 | 33.647 | missense_variant | missense_variant | ENSG00000179431 | 0 | ENSG00000179431 | 0 | 0 | ENSG00000179431 | missense_variant | ENSG00000179431 | 1,419 | ENSG00000179431 | 191 | 191 | ENSG00000179431 | missense_variant | NA | NA | |
11 | 35,726,117 | A | G | false | missense_variant | 299 | rs61758104 | 0.000056 | 0.008719 | 15.887 | missense_variant | missense_variant | ENSG00000166326 | 0 | ENSG00000166326 | 0 | 0 | ENSG00000166326 | missense_variant | ENSG00000166326 | 63,341 | ENSG00000166326 | 1,860 | 1,860 | ENSG00000166326 | missense_variant | NA | NA | |
11 | 35,947,826 | C | G | false | distal | 365 | rs190294887 | 0.000039 | 0.001592 | 6.6398 | intron_variant | dELS_flank | ENSG00000179241 | 3,681 | ENSG00000179241 | 3,681 | 3,681 | ENSG00000179241 | dELS_flank | ENSG00000179241 | 3,763 | ENSG00000179241 | 3,726 | 3,726 | ENSG00000179241 | distal | NA | NA | |
11 | 36,197,002 | T | G | false | non_coding_transcript_exon_variant | 348 | rs3812768 | 0.000075 | 0.47335 | 92.223 | non_coding_transcript_exon_variant | non_coding_transcript_exon_variant | ENSG00000179241 | 30,082 | ENSG00000280321 | 0 | 0 | ENSG00000280321 | non_coding_transcript_exon_variant | ENSG00000110442 | 92,421 | ENSG00000280321 | 753 | 753 | ENSG00000280321 | non_coding_transcript_exon_variant | NA | NA | |
11 | 36,197,208 | G | A | false | non_coding_transcript_exon_variant | 348 | rs10836517 | 0.000073 | 0.47347 | 92.24 | non_coding_transcript_exon_variant | non_coding_transcript_exon_variant | ENSG00000179241 | 29,876 | ENSG00000280321 | 0 | 0 | ENSG00000280321 | non_coding_transcript_exon_variant | ENSG00000110442 | 92,215 | ENSG00000280321 | 959 | 959 | ENSG00000280321 | non_coding_transcript_exon_variant | NA | NA | |
11 | 36,374,320 | C | T | false | distal | 347 | rs7115677 | 0.000092 | 0.28707 | 35.854 | intron_variant | pELS_flank | ENSG00000135362 | 1,684 | ENSG00000135362 | 1,717 | 1,684 | ENSG00000135362 | pELS_flank | ENSG00000135362 | 1,684 | ENSG00000135362 | 1,717 | 1,684 | ENSG00000135362 | distal | NA | NA | |
11 | 36,427,990 | C | T | false | distal | 400 | rs873615 | 0.000027 | 0.38829 | 61.322 | intron_variant | pELS | ENSG00000135362 | 3,862 | ENSG00000255060 | 1,867 | 1,867 | ENSG00000255060 | pELS | ENSG00000135362 | 26,924 | ENSG00000255060 | 1,867 | 1,867 | ENSG00000255060 | distal | NA | NA | |
11 | 36,462,617 | C | T | false | missense_variant | 296 | rs11033639 | 0.000071 | 0.085598 | 48.683 | missense_variant | missense_variant | ENSG00000135362 | 0 | ENSG00000135362 | 0 | 0 | ENSG00000135362 | missense_variant | ENSG00000175104 | 47,638 | ENSG00000135362 | 7,327 | 7,327 | ENSG00000135362 | missense_variant | NA | NA | |
11 | 36,593,011 | G | T | false | missense_variant | 292 | rs34629171 | 0.000062 | 0.019889 | 37.104 | missense_variant | missense_variant | ENSG00000175097 | 0 | ENSG00000166349 | 0 | 0 | ENSG00000175097 | missense_variant | ENSG00000166352 | 1,357 | ENSG00000166352 | 1,475 | 1,357 | ENSG00000166352 | missense_variant | NA | NA | |
11 | 42,208,127 | T | C | false | distal | 386 | rs57233031 | 0.000076 | 0.22278 | 297.99 | intron_variant | intron_variant | ENSG00000148948 | 748,353 | ENSG00000255109 | 5,622 | 5,622 | ENSG00000255109 | intron_variant | ENSG00000148948 | 748,353 | ENSG00000255109 | 31,607 | 31,607 | ENSG00000255109 | distal | NA | NA | |
11 | 42,211,299 | T | A | false | distal | 386 | rs2862463 | 0.000055 | 0.23337 | 292.91 | intron_variant | intron_variant | ENSG00000148948 | 751,525 | ENSG00000255109 | 3,491 | 3,491 | ENSG00000255109 | intron_variant | ENSG00000148948 | 751,525 | ENSG00000255109 | 28,435 | 28,435 | ENSG00000255109 | distal | NA | NA | |
11 | 42,214,185 | T | C | false | distal | 386 | rs10837793 | 0.000079 | 0.22284 | 297.64 | intron_variant | intron_variant | ENSG00000148948 | 754,411 | ENSG00000255109 | 605 | 605 | ENSG00000255109 | intron_variant | ENSG00000148948 | 754,411 | ENSG00000255109 | 25,549 | 25,549 | ENSG00000255109 | distal | NA | NA | |
11 | 42,217,847 | T | C | false | distal | 386 | rs10219301 | 0.00008 | 0.21197 | 276.68 | intron_variant | intron_variant | ENSG00000148948 | 758,073 | ENSG00000255109 | 2,860 | 2,860 | ENSG00000255109 | intron_variant | ENSG00000148948 | 758,073 | ENSG00000255109 | 21,887 | 21,887 | ENSG00000255109 | distal | NA | NA | |
11 | 42,220,483 | T | C | false | distal | 386 | rs11036771 | 0.000076 | 0.17938 | 278.81 | intron_variant | intron_variant | ENSG00000148948 | 760,709 | ENSG00000255109 | 5,496 | 5,496 | ENSG00000255109 | intron_variant | ENSG00000148948 | 760,709 | ENSG00000255109 | 19,251 | 19,251 | ENSG00000255109 | distal | NA | NA | |
11 | 42,220,645 | A | G | false | distal | 386 | rs7942596 | 0.000075 | 0.21078 | 276.08 | intron_variant | intron_variant | ENSG00000148948 | 760,871 | ENSG00000255109 | 5,439 | 5,439 | ENSG00000255109 | intron_variant | ENSG00000148948 | 760,871 | ENSG00000255109 | 19,089 | 19,089 | ENSG00000255109 | distal | NA | NA | |
11 | 43,350,525 | T | G | false | distal | 387 | rs12416772 | 0.001887 | 0.090293 | 177.66 | intron_variant | intron_variant | ENSG00000166181 | 5,995 | ENSG00000052841 | 8,428 | 5,995 | ENSG00000166181 | intron_variant | ENSG00000052841 | 8,394 | ENSG00000052841 | 8,428 | 8,394 | ENSG00000052841 | distal | NA | NA | |
11 | 43,372,305 | C | T | false | distal | 332 | rs75926134 | 0.002686 | 0.088496 | 177.16 | intron_variant | dELS | ENSG00000052841 | 6,927 | ENSG00000052841 | 1,919 | 1,919 | ENSG00000052841 | dELS | ENSG00000052841 | 13,372 | ENSG00000052841 | 6,952 | 6,952 | ENSG00000052841 | distal | NA | NA | |
11 | 43,410,756 | T | C | false | distal | 340 | rs61883557 | 0.000092 | 0.2308 | 216.28 | intron_variant | dELS | ENSG00000052841 | 3,178 | ENSG00000052841 | 3,178 | 3,178 | ENSG00000052841 | dELS | ENSG00000052841 | 40,423 | ENSG00000052841 | 6,703 | 6,703 | ENSG00000052841 | distal | NA | NA | |
11 | 43,934,490 | G | A | false | distal | 330 | rs55641841 | 0.000033 | 0.083657 | 20.58 | intron_variant | dELS | ENSG00000187479 | 8,146 | ENSG00000254409 | 1,079 | 1,079 | ENSG00000254409 | dELS | ENSG00000187479 | 8,146 | ENSG00000244953 | 12,715 | 8,146 | ENSG00000187479 | distal | NA | NA | |
11 | 43,942,075 | T | C | false | tss_proximal | 380 | rs112461644 | 0.000129 | 0.15692 | 42.831 | intron_variant | PLS_flank | ENSG00000187479 | 561 | ENSG00000244953 | 1,711 | 561 | ENSG00000187479 | tss_proximal | ENSG00000187479 | 561 | ENSG00000244953 | 5,130 | 561 | ENSG00000187479 | tss_proximal | tss_prox:b1 | tss_prox:b1 | |
11 | 44,119,191 | C | G | false | distal | 332 | rs59730448 | 0.001561 | 0.095247 | 61.725 | intron_variant | dELS | ENSG00000151348 | 4,889 | ENSG00000151348 | 2,351 | 2,351 | ENSG00000151348 | dELS | ENSG00000151348 | 23,361 | ENSG00000151348 | 7,711 | 7,711 | ENSG00000151348 | distal | NA | NA | |
11 | 44,204,633 | C | T | false | tss_proximal | 390 | rs9783299 | 0.000106 | 0.39418 | 139.55 | intron_variant | intron_variant | ENSG00000151348 | 2,159 | ENSG00000151348 | 349 | 349 | ENSG00000151348 | tss_proximal | ENSG00000052850 | 105,505 | ENSG00000151348 | 349 | 349 | ENSG00000151348 | tss_proximal | tss_prox:b2 | tss_prox:b2 | |
11 | 44,602,122 | T | C | false | distal | 357 | rs11607999 | 0.000021 | 0.28828 | 43.59 | intron_variant | dELS_flank | ENSG00000085117 | 1,891 | ENSG00000085117 | 1,891 | 1,891 | ENSG00000085117 | dELS_flank | ENSG00000085117 | 5,265 | ENSG00000085117 | 2,305 | 2,305 | ENSG00000085117 | distal | NA | NA | |
11 | 44,680,408 | G | A | false | distal | 362 | rs79593075 | 0.000028 | 0.023134 | 26.022 | intergenic_variant | dELS_flank | ENSG00000157570 | 46,056 | ENSG00000255079 | 14,454 | 14,454 | ENSG00000255079 | dELS_flank | ENSG00000157570 | 46,056 | ENSG00000255079 | 15,892 | 15,892 | ENSG00000255079 | distal | NA | NA | |
11 | 44,680,921 | G | A | false | distal | 362 | rs80314566 | 0.000086 | 0.025721 | 25.548 | intergenic_variant | dELS_flank | ENSG00000157570 | 45,543 | ENSG00000255079 | 13,941 | 13,941 | ENSG00000255079 | dELS_flank | ENSG00000157570 | 45,543 | ENSG00000255079 | 15,379 | 15,379 | ENSG00000255079 | distal | NA | NA | |
11 | 44,909,084 | A | G | false | tss_proximal | 374 | rs4755296 | 0.000092 | 0.48925 | 47.762 | intron_variant | intron_variant | ENSG00000157570 | 620 | ENSG00000157570 | 438 | 438 | ENSG00000157570 | tss_proximal | ENSG00000157570 | 2,676 | ENSG00000157570 | 438 | 438 | ENSG00000157570 | tss_proximal | tss_prox:b2 | tss_prox:b1 | |
11 | 44,910,252 | T | C | false | tss_proximal | 374 | rs10838386 | 0.000092 | 0.48992 | 47.85 | intron_variant | dELS_flank | ENSG00000157570 | 352 | ENSG00000157570 | 352 | 352 | ENSG00000157570 | tss_proximal | ENSG00000157570 | 3,844 | ENSG00000157570 | 728 | 728 | ENSG00000157570 | tss_proximal | tss_prox:b2 | tss_prox:b1 | |
11 | 45,161,238 | T | C | false | distal | 319 | rs6485595 | 0.000092 | 0.02278 | 52.858 | intron_variant | dELS | ENSG00000019485 | 13,656 | ENSG00000019485 | 21,678 | 13,656 | ENSG00000019485 | dELS | ENSG00000019485 | 13,894 | ENSG00000019485 | 21,678 | 13,894 | ENSG00000019485 | distal | NA | NA | |
11 | 45,163,124 | A | C | false | distal | 319 | rs141314901 | 0.000037 | 0.023725 | 44.951 | intron_variant | dELS | ENSG00000019485 | 15,542 | ENSG00000019485 | 19,792 | 15,542 | ENSG00000019485 | dELS | ENSG00000019485 | 15,780 | ENSG00000019485 | 19,792 | 15,780 | ENSG00000019485 | distal | NA | NA | |
11 | 45,208,510 | G | T | false | distal | 320 | rs7128207 | 0.005924 | 0.43962 | 101.18 | intron_variant | dELS | ENSG00000019485 | 363 | ENSG00000019485 | 3,731 | 363 | ENSG00000019485 | dELS | ENSG00000019485 | 61,166 | ENSG00000019485 | 25,592 | 25,592 | ENSG00000019485 | distal | NA | NA |
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