chrom
stringclasses
12 values
pos
int64
36.1k
249M
ref
stringclasses
4 values
alt
stringclasses
4 values
label
bool
2 classes
subset
stringclasses
8 values
match_group
int64
0
2.16k
rsid
stringlengths
3
15
pip
float64
0
1
traits
stringclasses
279 values
MAF
float64
0
0.5
ld_score
float64
1.01
3.79k
consequence
stringclasses
13 values
consequence_cre
stringclasses
29 values
exon_closest_pc_gene_id
stringlengths
15
15
distance_exon_pc
int64
0
1.68M
exon_closest_nc_gene_id
stringlengths
15
15
distance_exon_nc
int64
0
507k
distance_exon
int64
0
507k
exon_closest_gene_id
stringlengths
15
15
consequence_final
stringclasses
28 values
tss_closest_pc_gene_id
stringlengths
15
15
distance_tss_pc
int64
0
1.69M
tss_closest_nc_gene_id
stringlengths
15
15
distance_tss_nc
int64
0
531k
distance_tss
int64
0
531k
tss_closest_gene_id
stringlengths
15
15
consequence_group
stringclasses
8 values
distance_tss_pc_bin
stringclasses
4 values
distance_exon_pc_bin
stringclasses
7 values
11
60,763,873
T
G
false
missense_variant
314
rs1032939
0.000292
0.47985
19.643
missense_variant
missense_variant
ENSG00000166961
0
ENSG00000166961
0
0
ENSG00000166961
missense_variant
ENSG00000166961
6,869
ENSG00000166961
6,868
6,868
ENSG00000166961
missense_variant
NA
NA
11
60,841,181
T
C
false
tss_proximal
381
rs558584
0.00011
0.40148
83.583
intron_variant
pELS_flank
ENSG00000110104
931
ENSG00000256813
624
624
ENSG00000256813
tss_proximal
ENSG00000110104
931
ENSG00000110104
963
931
ENSG00000110104
tss_proximal
tss_prox:b1
tss_prox:b1
11
60,849,955
C
G
false
missense_variant
315
rs145131633
0.000081
0.003978
15.388
missense_variant
missense_variant
ENSG00000110104
0
ENSG00000110104
0
0
ENSG00000110104
missense_variant
ENSG00000110104
2,481
ENSG00000256813
1,125
1,125
ENSG00000256813
missense_variant
NA
NA
11
60,870,988
C
T
false
synonymous_variant
285
rs10897122
0.000601
0.2372
105.57
synonymous_variant
synonymous_variant
ENSG00000149506
0
ENSG00000149506
0
0
ENSG00000149506
synonymous_variant
ENSG00000149506
3,445
ENSG00000149506
146
146
ENSG00000149506
synonymous_variant
NA
NA
11
60,928,927
G
A
false
missense_variant
306
rs61751216
0.000117
0.039214
41.822
missense_variant
missense_variant
ENSG00000006118
0
ENSG00000006118
0
0
ENSG00000006118
missense_variant
ENSG00000006118
2,827
ENSG00000006118
1,858
1,858
ENSG00000006118
missense_variant
NA
NA
11
60,954,227
T
G
false
distal
345
rs10792299
0.000181
0.23797
75.746
intergenic_variant
pELS_flank
ENSG00000110446
1,573
ENSG00000110446
2,479
1,573
ENSG00000110446
pELS_flank
ENSG00000110446
1,573
ENSG00000110446
2,479
1,573
ENSG00000110446
distal
NA
NA
11
61,012,351
G
A
false
distal
318
rs12275418
0.000089
0.18507
70.099
intron_variant
dELS
ENSG00000013725
1,071
ENSG00000013725
1,071
1,071
ENSG00000013725
dELS
ENSG00000013725
3,816
ENSG00000013725
3,069
3,069
ENSG00000013725
distal
NA
NA
11
61,022,171
A
C
true
distal
359
rs55753183
0.99402
Lym
0.34231
72.158
intergenic_variant
dELS_flank
ENSG00000013725
1,793
ENSG00000013725
1,796
1,793
ENSG00000013725
dELS_flank
ENSG00000013725
13,636
ENSG00000013725
5,267
5,267
ENSG00000013725
distal
NA
NA
11
61,123,028
G
C
false
missense_variant
304
rs117045863
0.000664
0.003364
63.995
missense_variant
missense_variant
ENSG00000110448
0
ENSG00000167987
9,728
0
ENSG00000110448
missense_variant
ENSG00000110448
20,518
ENSG00000279549
22,435
20,518
ENSG00000110448
missense_variant
NA
NA
11
61,125,133
C
T
false
missense_variant
304
rs34209302
0.000509
0.010841
68.444
missense_variant
missense_variant
ENSG00000110448
0
ENSG00000167987
7,623
0
ENSG00000110448
missense_variant
ENSG00000110448
22,623
ENSG00000279549
20,330
20,330
ENSG00000279549
missense_variant
NA
NA
11
61,132,343
A
T
false
missense_variant
296
rs2232142
0.001118
0.092601
38.506
missense_variant
missense_variant
ENSG00000167987
0
ENSG00000167987
413
0
ENSG00000167987
missense_variant
ENSG00000167987
28,792
ENSG00000279549
13,120
13,120
ENSG00000279549
missense_variant
NA
NA
11
61,203,569
A
G
false
missense_variant
317
rs78669446
0.000146
0.008317
13.834
missense_variant
missense_variant
ENSG00000229859
0
ENSG00000229859
0
0
ENSG00000229859
missense_variant
ENSG00000229859
53
ENSG00000229859
53
53
ENSG00000229859
missense_variant
NA
NA
11
61,332,481
A
G
false
5_prime_UTR_variant
282
rs28720250
0.000251
0.011329
5.8136
5_prime_UTR_variant
5_prime_UTR_variant
ENSG00000167986
152
ENSG00000167986
0
0
ENSG00000167986
5_prime_UTR_variant
ENSG00000167986
353
ENSG00000167986
279
279
ENSG00000167986
5_prime_UTR_variant
NA
NA
11
61,699,829
G
A
false
distal
324
rs116897102
0.000495
0.032871
24.389
intron_variant
dELS
ENSG00000134780
19,324
ENSG00000134780
19,324
19,324
ENSG00000134780
dELS
ENSG00000134780
19,437
ENSG00000134780
19,361
19,361
ENSG00000134780
distal
NA
NA
11
61,890,366
G
A
false
non_coding_transcript_exon_variant
349
rs174463
0.001696
0.25619
84.96
non_coding_transcript_exon_variant
non_coding_transcript_exon_variant
ENSG00000221968
802
ENSG00000221968
0
0
ENSG00000221968
non_coding_transcript_exon_variant
ENSG00000221968
1,014
ENSG00000221968
1,087
1,014
ENSG00000221968
non_coding_transcript_exon_variant
NA
NA
11
61,904,793
T
C
false
synonymous_variant
285
rs174474
0.000173
0.22688
54.758
synonymous_variant
synonymous_variant
ENSG00000167994
0
ENSG00000167994
90
0
ENSG00000167994
synonymous_variant
ENSG00000167994
5,454
ENSG00000167994
90
90
ENSG00000167994
synonymous_variant
NA
NA
11
61,908,242
T
C
false
missense_variant
310
rs34281659
0.00142
0.055656
41.166
missense_variant
missense_variant
ENSG00000167994
0
ENSG00000167994
3,539
0
ENSG00000167994
missense_variant
ENSG00000167994
8,903
ENSG00000167994
3,539
3,539
ENSG00000167994
missense_variant
NA
NA
11
61,939,005
A
G
false
distal
368
rs185027945
0.000495
0.003084
8.3453
intergenic_variant
intergenic_variant
ENSG00000167995
11,057
ENSG00000200898
1,004
1,004
ENSG00000200898
intergenic_variant
ENSG00000167995
11,057
ENSG00000200898
1,110
1,110
ENSG00000200898
distal
NA
NA
11
61,950,091
T
A
false
5_prime_UTR_variant
282
rs117165769
0.000044
0.012512
18.29
5_prime_UTR_variant
5_prime_UTR_variant
ENSG00000167995
0
ENSG00000167995
261
0
ENSG00000167995
5_prime_UTR_variant
ENSG00000167995
27
ENSG00000167995
261
27
ENSG00000167995
5_prime_UTR_variant
NA
NA
11
61,956,964
T
C
false
missense_variant
307
rs199529046
0.000539
0.00014
2.0476
missense_variant
missense_variant
ENSG00000167995
0
ENSG00000167995
0
0
ENSG00000167995
missense_variant
ENSG00000167995
1,806
ENSG00000167995
6,603
1,806
ENSG00000167995
missense_variant
NA
NA
11
61,956,981
C
A
false
missense_variant
307
rs74653691
0.000047
0.000184
45.036
missense_variant
missense_variant
ENSG00000167995
0
ENSG00000167995
0
0
ENSG00000167995
missense_variant
ENSG00000167995
1,823
ENSG00000167995
6,620
1,823
ENSG00000167995
missense_variant
NA
NA
11
62,120,535
C
T
false
distal
339
rs4963463
0.000641
0.27915
166
intron_variant
dELS
ENSG00000149503
3,462
ENSG00000285656
3,121
3,121
ENSG00000285656
dELS
ENSG00000149503
3,462
ENSG00000285656
3,231
3,231
ENSG00000285656
distal
NA
NA
11
62,146,788
G
A
false
missense_variant
310
rs116873148
0.000207
0.086826
126.15
missense_variant
missense_variant
ENSG00000149503
0
ENSG00000149503
5,042
0
ENSG00000149503
missense_variant
ENSG00000149503
22,776
ENSG00000149503
5,693
5,693
ENSG00000149503
missense_variant
NA
NA
11
62,153,776
G
A
false
non_coding_transcript_exon_variant
354
rs10897219
0.000196
0.36761
220.16
non_coding_transcript_exon_variant
non_coding_transcript_exon_variant
ENSG00000149503
606
ENSG00000289194
0
0
ENSG00000289194
non_coding_transcript_exon_variant
ENSG00000149503
29,764
ENSG00000289194
45
45
ENSG00000289194
non_coding_transcript_exon_variant
NA
NA
11
62,426,962
A
G
true
tss_proximal
391
rs74679312
0.999605
Lym
0.057785
42.835
upstream_gene_variant
PLS
ENSG00000149021
3,766
ENSG00000255446
237
237
ENSG00000255446
tss_proximal
ENSG00000149021
7,928
ENSG00000255446
237
237
ENSG00000255446
tss_proximal
tss_prox:b2
tss_prox:b2
11
62,433,767
T
C
true
3_prime_UTR_variant
392
rs117111740
1
eBMD
0.027094
32.912
3_prime_UTR_variant
3_prime_UTR_variant
ENSG00000124942
0
ENSG00000124942
0
0
ENSG00000124942
3_prime_UTR_variant
ENSG00000149021
14,733
ENSG00000255446
7,042
7,042
ENSG00000255446
3_prime_UTR_variant
NA
NA
11
62,523,247
A
G
false
missense_variant
316
rs11231128
0.000178
0.027731
89.927
missense_variant
missense_variant
ENSG00000124942
0
ENSG00000124942
5,889
0
ENSG00000124942
missense_variant
ENSG00000124942
12,859
ENSG00000124942
5,889
5,889
ENSG00000124942
missense_variant
NA
NA
11
62,530,596
A
G
false
missense_variant
316
rs115627503
0.000113
0.015018
16.382
missense_variant
missense_variant
ENSG00000124942
0
ENSG00000250659
6,715
0
ENSG00000124942
missense_variant
ENSG00000124942
5,510
ENSG00000250659
6,715
5,510
ENSG00000124942
missense_variant
NA
NA
11
62,544,864
G
T
false
tss_proximal
382
rs75313269
0.000338
0.009735
62.207
intron_variant
pELS
ENSG00000124942
701
ENSG00000257058
1,134
701
ENSG00000124942
tss_proximal
ENSG00000124942
798
ENSG00000257058
1,134
798
ENSG00000124942
tss_proximal
tss_prox:b1
tss_prox:b1
11
62,602,429
G
A
false
missense_variant
313
rs571627255
0.000088
0.000071
2.1999
missense_variant
missense_variant
ENSG00000149499
0
ENSG00000149499
0
0
ENSG00000149499
missense_variant
ENSG00000149480
563
ENSG00000149480
941
563
ENSG00000149480
missense_variant
NA
NA
11
62,663,187
T
A
false
missense_variant
289
rs597259
0.002925
0.31594
136.84
missense_variant
missense_variant
ENSG00000278615
0
ENSG00000278615
27
0
ENSG00000278615
missense_variant
ENSG00000255432
1,990
ENSG00000278615
1,993
1,990
ENSG00000255432
missense_variant
NA
NA
11
62,672,097
G
A
false
missense_variant
289
rs13941
0.002573
0.31651
136.45
missense_variant
missense_variant
ENSG00000162194
0
ENSG00000162194
331
0
ENSG00000162194
missense_variant
ENSG00000162194
157
ENSG00000162194
331
157
ENSG00000162194
missense_variant
NA
NA
11
62,692,378
G
A
false
missense_variant
300
rs370926100
0.000113
0.000227
5.8553
missense_variant
missense_variant
ENSG00000168000
0
ENSG00000168000
0
0
ENSG00000168000
missense_variant
ENSG00000168000
370
ENSG00000168000
418
370
ENSG00000168000
missense_variant
NA
NA
11
62,699,576
C
T
false
distal
389
rs139118832
0.00033
0.007274
18.445
intron_variant
intron_variant
ENSG00000168000
2,891
ENSG00000168000
2,347
2,347
ENSG00000168000
intron_variant
ENSG00000168000
6,641
ENSG00000168000
3,554
3,554
ENSG00000168000
distal
NA
NA
11
62,706,076
C
T
false
5_prime_UTR_variant
278
rs56135662
0.000988
0.23465
144.26
5_prime_UTR_variant
5_prime_UTR_variant
ENSG00000168000
0
ENSG00000168000
0
0
ENSG00000168000
5_prime_UTR_variant
ENSG00000168000
141
ENSG00000168000
143
141
ENSG00000168000
5_prime_UTR_variant
NA
NA
11
62,726,220
G
C
false
distal
401
rs189824590
0.000063
0.010635
65.158
intron_variant
pELS
ENSG00000214753
398
ENSG00000234857
398
398
ENSG00000214753
pELS
ENSG00000214753
1,236
ENSG00000234857
1,163
1,163
ENSG00000234857
distal
NA
NA
11
62,752,093
G
C
false
missense_variant
291
rs544641
0.000176
0.015161
83.607
missense_variant
missense_variant
ENSG00000185670
0
ENSG00000185670
0
0
ENSG00000185670
missense_variant
ENSG00000185670
2,065
ENSG00000185670
5
5
ENSG00000185670
missense_variant
NA
NA
11
62,827,217
G
A
false
missense_variant
302
rs144967757
0.001307
0.003906
11.687
missense_variant
missense_variant
ENSG00000162236
0
ENSG00000162236
0
0
ENSG00000162236
missense_variant
ENSG00000162236
413
ENSG00000162236
163
163
ENSG00000162236
missense_variant
NA
NA
11
62,984,817
C
T
false
5_prime_UTR_variant
279
rs4149170
0.000095
0.076847
35.822
5_prime_UTR_variant
5_prime_UTR_variant
ENSG00000197901
0
ENSG00000197901
0
0
ENSG00000197901
5_prime_UTR_variant
ENSG00000197901
126
ENSG00000197901
6
6
ENSG00000197901
5_prime_UTR_variant
NA
NA
11
63,017,070
T
C
false
distal
347
rs7478785
0.000061
0.29165
47.487
intergenic_variant
pELS_flank
ENSG00000149452
1,228
ENSG00000149452
1,230
1,228
ENSG00000149452
pELS_flank
ENSG00000149452
1,228
ENSG00000149452
1,230
1,228
ENSG00000149452
distal
NA
NA
11
63,294,191
G
C
false
distal
389
rs140168473
0.000169
0.008183
201.96
intron_variant
intron_variant
ENSG00000184999
2,547
ENSG00000184999
2,547
2,547
ENSG00000184999
intron_variant
ENSG00000184999
3,882
ENSG00000184999
3,891
3,882
ENSG00000184999
distal
NA
NA
11
63,378,634
C
T
false
distal
383
rs548713
0
0.000013
22.54
intron_variant
intron_variant
ENSG00000149742
2,865
ENSG00000149742
2,865
2,865
ENSG00000149742
intron_variant
ENSG00000149742
8,848
ENSG00000149742
8,844
8,844
ENSG00000149742
distal
NA
NA
11
63,378,828
A
G
false
distal
383
rs57518967
0
0.000331
236.27
intron_variant
intron_variant
ENSG00000149742
3,059
ENSG00000149742
3,059
3,059
ENSG00000149742
intron_variant
ENSG00000149742
9,042
ENSG00000149742
9,038
9,038
ENSG00000149742
distal
NA
NA
11
63,463,550
T
C
false
missense_variant
295
rs142358923
0.000625
0.000396
3.1595
missense_variant
missense_variant
ENSG00000168004
0
ENSG00000168004
0
0
ENSG00000168004
missense_variant
ENSG00000168004
26,981
ENSG00000275598
5,825
5,825
ENSG00000275598
missense_variant
NA
NA
11
63,463,570
G
A
false
missense_variant
295
rs35375575
0.000078
0.000041
137.42
missense_variant
missense_variant
ENSG00000168004
0
ENSG00000168004
0
0
ENSG00000168004
missense_variant
ENSG00000168004
26,961
ENSG00000275598
5,805
5,805
ENSG00000275598
missense_variant
NA
NA
11
63,493,962
T
C
false
distal
346
rs11231507
0.000064
0.18946
49.243
intergenic_variant
pELS_flank
ENSG00000168004
2,767
ENSG00000287412
1,521
1,521
ENSG00000287412
pELS_flank
ENSG00000168004
2,767
ENSG00000287412
1,521
1,521
ENSG00000287412
distal
NA
NA
11
63,545,623
G
T
false
distal
342
rs72930190
0.000126
0.077805
46.189
intron_variant
dELS
ENSG00000133321
235
ENSG00000133321
525
235
ENSG00000133321
dELS
ENSG00000133321
7,226
ENSG00000133321
8,777
7,226
ENSG00000133321
distal
NA
NA
11
63,839,430
G
T
false
5_prime_UTR_variant
284
rs565373536
0.000272
0.004643
44.439
5_prime_UTR_variant
5_prime_UTR_variant
ENSG00000072518
0
ENSG00000256280
4,486
0
ENSG00000072518
5_prime_UTR_variant
ENSG00000072518
0
ENSG00000256280
4,486
0
ENSG00000072518
5_prime_UTR_variant
NA
NA
11
63,882,570
G
C
false
tss_proximal
391
rs61886133
0.000483
0.057998
104.99
intron_variant
pELS_flank
ENSG00000072518
2,341
ENSG00000202089
16
16
ENSG00000202089
tss_proximal
ENSG00000072518
5,976
ENSG00000202089
114
114
ENSG00000202089
tss_proximal
tss_prox:b2
tss_prox:b2
11
63,932,585
G
A
false
distal
358
rs4980509
0.000751
0.41417
217.08
intergenic_variant
dELS_flank
ENSG00000110583
6,416
ENSG00000110583
6,373
6,373
ENSG00000110583
dELS_flank
ENSG00000110583
6,416
ENSG00000110583
6,373
6,373
ENSG00000110583
distal
NA
NA
11
63,939,731
G
A
false
tss_proximal
381
rs4980499
0.000668
0.40152
217.05
intron_variant
pELS
ENSG00000110583
196
ENSG00000110583
628
196
ENSG00000110583
tss_proximal
ENSG00000110583
482
ENSG00000110583
728
482
ENSG00000110583
tss_proximal
tss_prox:b1
tss_prox:b1
11
64,093,845
A
G
false
distal
367
rs7941785
0.003278
0.37812
88.859
intron_variant
dELS_flank
ENSG00000126500
9,342
ENSG00000256481
6,669
6,669
ENSG00000256481
dELS_flank
ENSG00000126500
9,342
ENSG00000256481
12,154
9,342
ENSG00000126500
distal
NA
NA
11
64,106,201
G
A
true
distal
330
rs12418845
0.993125
GGT
0.076684
107.39
intron_variant
dELS
ENSG00000126500
2,019
ENSG00000256824
2,547
2,019
ENSG00000126500
dELS
ENSG00000126500
3,012
ENSG00000256341
13,008
3,012
ENSG00000126500
distal
NA
NA
11
64,141,756
T
C
false
distal
367
rs7102177
0.000688
0.36703
171.13
intron_variant
dELS_flank
ENSG00000133315
9,482
ENSG00000133315
6,990
6,990
ENSG00000133315
dELS_flank
ENSG00000133315
24,356
ENSG00000133315
14,821
14,821
ENSG00000133315
distal
NA
NA
11
64,143,508
A
G
false
distal
367
rs12418535
0.000668
0.3671
171.14
intron_variant
dELS_flank
ENSG00000133315
7,730
ENSG00000133315
5,238
5,238
ENSG00000133315
dELS_flank
ENSG00000133315
22,604
ENSG00000133315
16,573
16,573
ENSG00000133315
distal
NA
NA
11
64,169,717
C
T
false
distal
365
rs186905505
0.000128
0.002348
14.179
intergenic_variant
dELS_flank
ENSG00000133315
3,603
ENSG00000133315
3,610
3,603
ENSG00000133315
dELS_flank
ENSG00000133315
3,603
ENSG00000133315
3,610
3,603
ENSG00000133315
distal
NA
NA
11
64,169,751
C
G
false
distal
365
rs73500126
0
0.000683
77.35
intergenic_variant
dELS_flank
ENSG00000133315
3,637
ENSG00000133315
3,644
3,637
ENSG00000133315
dELS_flank
ENSG00000133315
3,637
ENSG00000133315
3,644
3,637
ENSG00000133315
distal
NA
NA
11
64,205,432
C
T
false
tss_proximal
382
rs188086329
0.002418
0.01051
20.644
upstream_gene_variant
pELS
ENSG00000149781
493
ENSG00000149781
1,194
493
ENSG00000149781
tss_proximal
ENSG00000149781
493
ENSG00000149781
1,194
493
ENSG00000149781
tss_proximal
tss_prox:b1
tss_prox:b1
11
64,207,494
G
A
false
missense_variant
317
rs149000560
0.006099
0.008807
46.594
missense_variant
missense_variant
ENSG00000149781
0
ENSG00000149781
0
0
ENSG00000149781
missense_variant
ENSG00000149781
277
ENSG00000149781
236
236
ENSG00000149781
missense_variant
NA
NA
11
64,207,523
C
G
true
missense_variant
302
rs142815441
0.98802
Lym,WBC
0.004178
17.305
missense_variant
missense_variant
ENSG00000149781
0
ENSG00000149781
0
0
ENSG00000149781
missense_variant
ENSG00000149781
248
ENSG00000149781
207
207
ENSG00000149781
missense_variant
NA
NA
11
64,210,770
G
A
false
missense_variant
305
rs138704967
0.000182
0.000546
9.9761
missense_variant
missense_variant
ENSG00000149781
0
ENSG00000149781
0
0
ENSG00000149781
missense_variant
ENSG00000149781
2,793
ENSG00000149781
21
21
ENSG00000149781
missense_variant
NA
NA
11
64,220,444
G
A
false
missense_variant
313
rs76744324
0.00013
0.000025
31.98
missense_variant
missense_variant
ENSG00000149781
0
ENSG00000149781
0
0
ENSG00000149781
missense_variant
ENSG00000149781
7
ENSG00000149781
933
7
ENSG00000149781
missense_variant
NA
NA
11
64,264,326
G
C
true
tss_proximal
375
rs589030
0.911905
RBC
0.33982
81.986
intron_variant
dELS_flank
ENSG00000149782
213
ENSG00000149782
213
213
ENSG00000149782
tss_proximal
ENSG00000173264
5,735
ENSG00000149782
945
945
ENSG00000149782
tss_proximal
tss_prox:b2
tss_prox:b1
11
64,288,090
C
T
false
missense_variant
291
rs116483940
0.002597
0.014888
22.357
missense_variant
missense_variant
ENSG00000173264
0
ENSG00000173264
0
0
ENSG00000173264
missense_variant
ENSG00000173264
272
ENSG00000173264
6
6
ENSG00000173264
missense_variant
NA
NA
11
64,303,800
G
C
false
missense_variant
291
rs117629442
0.000262
0.014749
20.394
missense_variant
missense_variant
ENSG00000219435
0
ENSG00000219435
0
0
ENSG00000219435
missense_variant
ENSG00000173153
1,696
ENSG00000219435
144
144
ENSG00000219435
missense_variant
NA
NA
11
64,359,758
G
T
false
non_coding_transcript_exon_variant
349
rs3765041
0.001068
0.26192
105.68
non_coding_transcript_exon_variant
non_coding_transcript_exon_variant
ENSG00000162302
308
ENSG00000162302
0
0
ENSG00000162302
non_coding_transcript_exon_variant
ENSG00000162302
473
ENSG00000162302
575
473
ENSG00000162302
non_coding_transcript_exon_variant
NA
NA
11
64,600,117
A
G
true
distal
395
rs2022051
0.992395
UA
0.20184
134.19
intron_variant
CA
ENSG00000197891
226
ENSG00000110076
6,056
226
ENSG00000197891
CA
ENSG00000197891
8,853
ENSG00000110076
23,878
8,853
ENSG00000197891
distal
NA
NA
11
64,600,179
G
A
false
distal
395
rs2022050
0.003125
0.1626
116.9
intron_variant
CA
ENSG00000197891
187
ENSG00000110076
5,994
187
ENSG00000197891
CA
ENSG00000197891
8,915
ENSG00000110076
23,816
8,915
ENSG00000197891
distal
NA
NA
11
64,600,264
A
G
false
distal
395
rs7929627
0.002096
0.18877
141.03
intron_variant
CA
ENSG00000197891
102
ENSG00000110076
5,909
102
ENSG00000197891
CA
ENSG00000197891
9,000
ENSG00000110076
23,731
9,000
ENSG00000197891
distal
NA
NA
11
64,600,382
G
A
true
missense_variant
303
rs147647315
0.99989
UA
0.000344
1.9716
missense_variant
missense_variant
ENSG00000197891
0
ENSG00000110076
5,791
0
ENSG00000197891
missense_variant
ENSG00000197891
9,118
ENSG00000110076
23,613
9,118
ENSG00000197891
missense_variant
NA
NA
11
64,600,430
C
T
true
missense_variant
304
rs201423508
1
UA
0.000155
7.002
missense_variant
missense_variant
ENSG00000197891
0
ENSG00000110076
5,743
0
ENSG00000197891
missense_variant
ENSG00000197891
9,166
ENSG00000110076
23,565
9,166
ENSG00000197891
missense_variant
NA
NA
11
64,601,501
G
A
false
missense_variant
303
rs199535450
0.000356
0.000464
2.0495
missense_variant
missense_variant
ENSG00000197891
0
ENSG00000110076
4,672
0
ENSG00000197891
missense_variant
ENSG00000197891
10,237
ENSG00000110076
22,494
10,237
ENSG00000197891
missense_variant
NA
NA
11
64,627,780
G
C
false
distal
357
rs10792443
0.004558
0.2833
154.03
intron_variant
dELS_flank
ENSG00000110076
1,227
ENSG00000110076
2,624
1,227
ENSG00000110076
dELS_flank
ENSG00000110076
15,022
ENSG00000110076
3,783
3,783
ENSG00000110076
distal
NA
NA
11
64,660,840
G
A
false
missense_variant
300
rs536698209
0.000448
0.000187
6.3035
missense_variant
missense_variant
ENSG00000110076
0
ENSG00000110076
0
0
ENSG00000110076
missense_variant
ENSG00000110076
537
ENSG00000110076
409
409
ENSG00000110076
missense_variant
NA
NA
11
64,683,512
C
T
false
distal
389
rs138972603
0.004382
0.007846
25.484
intron_variant
intron_variant
ENSG00000110076
2,133
ENSG00000110076
2,133
2,133
ENSG00000110076
intron_variant
ENSG00000110076
6,924
ENSG00000289058
4,169
4,169
ENSG00000289058
distal
NA
NA
11
64,699,070
T
G
true
distal
387
rs61884414
0.97965
eGFRcys
0.094666
89.942
intron_variant
intron_variant
ENSG00000110076
1,277
ENSG00000110076
8,643
1,277
ENSG00000110076
intron_variant
ENSG00000110076
8,632
ENSG00000110076
8,643
8,632
ENSG00000110076
distal
NA
NA
11
64,777,743
C
A
false
5_prime_UTR_variant
282
rs148736612
0.000746
0.013165
19.462
5_prime_UTR_variant
5_prime_UTR_variant
ENSG00000168066
0
ENSG00000168066
243
0
ENSG00000168066
5_prime_UTR_variant
ENSG00000168066
16
ENSG00000168066
293
16
ENSG00000168066
5_prime_UTR_variant
NA
NA
11
64,922,598
G
A
false
distal
388
rs147029783
0.005633
0.050893
171.96
intron_variant
intron_variant
ENSG00000068971
2,090
ENSG00000068971
386
386
ENSG00000068971
intron_variant
ENSG00000068971
2,090
ENSG00000068971
5,044
2,090
ENSG00000068971
distal
NA
NA
11
64,930,478
C
T
false
splicing
406
rs111934356
0.002326
0.049276
172.59
splice_region_variant
splice_region_variant
ENSG00000068971
2
ENSG00000068971
143
2
ENSG00000068971
splice_region_variant
ENSG00000149735
5,044
ENSG00000068971
2,743
2,743
ENSG00000068971
splicing
NA
splicing:b0
11
64,989,577
G
A
false
missense_variant
313
rs183849198
0.000575
0.000389
12.149
missense_variant
missense_variant
ENSG00000168062
0
ENSG00000168062
0
0
ENSG00000168062
missense_variant
ENSG00000168062
695
ENSG00000168062
936
695
ENSG00000168062
missense_variant
NA
NA
11
64,990,032
G
C
false
non_coding_transcript_exon_variant
350
rs574381
0.000426
0.26889
109.72
non_coding_transcript_exon_variant
non_coding_transcript_exon_variant
ENSG00000168062
41
ENSG00000168062
0
0
ENSG00000168062
non_coding_transcript_exon_variant
ENSG00000168062
240
ENSG00000168062
481
240
ENSG00000168062
non_coding_transcript_exon_variant
NA
NA
11
65,042,084
A
G
false
tss_proximal
376
rs2458297
0.000789
0.02085
62.139
intron_variant
pELS_flank
ENSG00000168061
155
ENSG00000168061
940
155
ENSG00000168061
tss_proximal
ENSG00000168061
838
ENSG00000168061
1,142
838
ENSG00000168061
tss_proximal
tss_prox:b1
tss_prox:b1
11
65,058,445
A
T
false
missense_variant
302
rs151287144
0.000859
0.003967
31.27
missense_variant
missense_variant
ENSG00000168060
0
ENSG00000168060
0
0
ENSG00000168060
missense_variant
ENSG00000168060
75
ENSG00000168060
96
75
ENSG00000168060
missense_variant
NA
NA
11
65,059,615
C
T
false
distal
347
rs3759041
0.004039
0.28878
115.13
intergenic_variant
pELS_flank
ENSG00000168060
1,061
ENSG00000168060
1,072
1,061
ENSG00000168060
pELS_flank
ENSG00000168060
1,061
ENSG00000168060
1,072
1,061
ENSG00000168060
distal
NA
NA
11
65,086,523
C
G
false
missense_variant
293
rs376156128
0.000338
0.000044
3.9447
missense_variant
missense_variant
ENSG00000162300
0
ENSG00000187066
0
0
ENSG00000162300
missense_variant
ENSG00000162300
1,369
ENSG00000162300
183
183
ENSG00000162300
missense_variant
NA
NA
11
65,087,340
G
A
false
missense_variant
292
rs35251366
0.000983
0.020685
61.392
missense_variant
missense_variant
ENSG00000162300
0
ENSG00000187066
0
0
ENSG00000162300
missense_variant
ENSG00000187066
1,684
ENSG00000162300
1,000
1,000
ENSG00000162300
missense_variant
NA
NA
11
65,109,763
G
T
false
missense_variant
300
rs146670601
0.000133
0.000356
8.7894
missense_variant
missense_variant
ENSG00000149823
0
ENSG00000149823
0
0
ENSG00000149823
missense_variant
ENSG00000149823
418
ENSG00000149823
444
418
ENSG00000149823
missense_variant
NA
NA
11
65,113,271
C
T
false
missense_variant
290
rs11539360
0.000528
0.034889
84.32
missense_variant
missense_variant
ENSG00000149809
0
ENSG00000149809
0
0
ENSG00000149809
missense_variant
ENSG00000149809
224
ENSG00000149809
56
56
ENSG00000149809
missense_variant
NA
NA
11
65,117,314
G
C
false
missense_variant
302
rs527818591
0.000257
0.00387
14.288
missense_variant
missense_variant
ENSG00000174276
0
ENSG00000255173
57
0
ENSG00000174276
missense_variant
ENSG00000174276
358
ENSG00000255173
156
156
ENSG00000255173
missense_variant
NA
NA
11
65,144,519
A
G
false
distal
368
rs115162511
0
0.00015
89.943
intergenic_variant
intergenic_variant
ENSG00000162298
9,986
ENSG00000254455
1,171
1,171
ENSG00000254455
intergenic_variant
ENSG00000162298
9,986
ENSG00000254455
1,452
1,452
ENSG00000254455
distal
NA
NA
11
65,183,932
A
T
false
tss_proximal
379
rs17881821
0.000448
0.002097
13.672
intron_variant
pELS
ENSG00000014216
339
ENSG00000014216
263
263
ENSG00000014216
tss_proximal
ENSG00000014216
595
ENSG00000014216
1,931
595
ENSG00000014216
tss_proximal
tss_prox:b1
tss_prox:b1
11
65,184,068
T
C
false
tss_proximal
379
rs558100102
0.000138
0.002155
13.564
intron_variant
pELS
ENSG00000014216
475
ENSG00000014216
399
399
ENSG00000014216
tss_proximal
ENSG00000014216
731
ENSG00000014216
1,863
731
ENSG00000014216
tss_proximal
tss_prox:b1
tss_prox:b1
11
65,185,977
G
A
true
missense_variant
305
rs199993600
1
UA
0.000177
3.5728
missense_variant
missense_variant
ENSG00000014216
0
ENSG00000014216
0
0
ENSG00000014216
missense_variant
ENSG00000014216
2,640
ENSG00000014216
44
44
ENSG00000014216
missense_variant
NA
NA
11
65,204,815
G
C
false
missense_variant
297
rs10895991
0.001634
0.078849
46.555
missense_variant
missense_variant
ENSG00000014216
0
ENSG00000014216
0
0
ENSG00000014216
missense_variant
ENSG00000014216
21,478
ENSG00000014216
1,441
1,441
ENSG00000014216
missense_variant
NA
NA
11
65,376,421
G
A
true
missense_variant
306
rs34400381
1
eGFR,sCr
0.034533
35.965
missense_variant
missense_variant
ENSG00000162241
0
ENSG00000162241
0
0
ENSG00000162241
missense_variant
ENSG00000162241
5,529
ENSG00000162241
1,603
1,603
ENSG00000162241
missense_variant
NA
NA
11
65,423,856
C
T
false
non_coding_transcript_exon_variant
352
rs188536477
0.001201
0.010854
24.906
non_coding_transcript_exon_variant
non_coding_transcript_exon_variant
ENSG00000126391
10,330
ENSG00000245532
0
0
ENSG00000245532
non_coding_transcript_exon_variant
ENSG00000126391
36,927
ENSG00000277599
103
103
ENSG00000277599
non_coding_transcript_exon_variant
NA
NA
11
65,552,280
G
A
false
missense_variant
294
rs11545200
0.000369
0.07091
126.51
missense_variant
missense_variant
ENSG00000168056
0
ENSG00000168056
0
0
ENSG00000168056
missense_variant
ENSG00000168056
5,678
ENSG00000168056
403
403
ENSG00000168056
missense_variant
NA
NA
11
65,580,876
G
A
false
tss_proximal
404
rs72939141
0.002189
0.024847
54.2
intron_variant
dELS
ENSG00000173442
51
ENSG00000173442
647
51
ENSG00000173442
tss_proximal
ENSG00000173442
1,022
ENSG00000173442
647
647
ENSG00000173442
tss_proximal
tss_prox:b2
tss_prox:b0
11
65,582,378
A
T
false
missense_variant
313
rs1194099
0.000149
0.00052
77.291
missense_variant
missense_variant
ENSG00000173442
0
ENSG00000173442
0
0
ENSG00000173442
missense_variant
ENSG00000173442
478
ENSG00000173442
853
478
ENSG00000173442
missense_variant
NA
NA
11
65,583,893
G
A
true
non_coding_transcript_exon_variant
350
rs10160596
1
MCH,MCV,TP
0.26647
147.48
non_coding_transcript_exon_variant
non_coding_transcript_exon_variant
ENSG00000173442
127
ENSG00000173442
0
0
ENSG00000173442
non_coding_transcript_exon_variant
ENSG00000173442
1,993
ENSG00000173442
401
401
ENSG00000173442
non_coding_transcript_exon_variant
NA
NA