chrom
stringclasses
12 values
pos
int64
36.1k
249M
ref
stringclasses
4 values
alt
stringclasses
4 values
label
bool
2 classes
subset
stringclasses
8 values
match_group
int64
0
2.16k
rsid
stringlengths
3
15
pip
float64
0
1
traits
stringclasses
279 values
MAF
float64
0
0.5
ld_score
float64
1.01
3.79k
consequence
stringclasses
13 values
consequence_cre
stringclasses
29 values
exon_closest_pc_gene_id
stringlengths
15
15
distance_exon_pc
int64
0
1.68M
exon_closest_nc_gene_id
stringlengths
15
15
distance_exon_nc
int64
0
507k
distance_exon
int64
0
507k
exon_closest_gene_id
stringlengths
15
15
consequence_final
stringclasses
28 values
tss_closest_pc_gene_id
stringlengths
15
15
distance_tss_pc
int64
0
1.69M
tss_closest_nc_gene_id
stringlengths
15
15
distance_tss_nc
int64
0
531k
distance_tss
int64
0
531k
tss_closest_gene_id
stringlengths
15
15
consequence_group
stringclasses
8 values
distance_tss_pc_bin
stringclasses
4 values
distance_exon_pc_bin
stringclasses
7 values
17
36,938,356
C
G
false
missense_variant
814
rs34167802
0.001545
0.002226
6.6169
missense_variant
missense_variant
ENSG00000273706
0
ENSG00000273706
0
0
ENSG00000273706
missense_variant
ENSG00000273706
880
ENSG00000273706
103
103
ENSG00000273706
missense_variant
NA
NA
17
37,345,342
G
A
false
5_prime_UTR_variant
891
rs77402427
0.000041
0.11129
96.551
5_prime_UTR_variant
5_prime_UTR_variant
ENSG00000278540
0
ENSG00000278540
5,491
0
ENSG00000278540
5_prime_UTR_variant
ENSG00000278540
13,753
ENSG00000278540
13,778
13,753
ENSG00000278540
5_prime_UTR_variant
NA
NA
17
37,351,277
T
C
false
distal
859
rs11869216
0.000513
0.20806
215.79
intron_variant
dELS_flank
ENSG00000278540
5,894
ENSG00000278540
7,721
5,894
ENSG00000278540
dELS_flank
ENSG00000278540
7,818
ENSG00000278540
7,843
7,818
ENSG00000278540
distal
NA
NA
17
37,470,450
A
C
false
missense_variant
820
rs142392695
0.000061
0.000021
8.2316
missense_variant
missense_variant
ENSG00000276234
0
ENSG00000276234
0
0
ENSG00000276234
missense_variant
ENSG00000276023
19,440
ENSG00000276234
6,968
6,968
ENSG00000276234
missense_variant
NA
NA
17
37,506,157
C
T
false
distal
846
rs150699618
0.000629
0.11978
94.136
intron_variant
dELS_flank
ENSG00000276023
3,721
ENSG00000275066
9,287
3,721
ENSG00000276023
dELS_flank
ENSG00000276023
3,721
ENSG00000275066
11,184
3,721
ENSG00000276023
distal
NA
NA
17
37,510,532
C
T
false
5_prime_UTR_variant
885
rs536001314
0.00013
0.001918
13.987
5_prime_UTR_variant
5_prime_UTR_variant
ENSG00000276023
0
ENSG00000275066
4,912
0
ENSG00000276023
5_prime_UTR_variant
ENSG00000276023
652
ENSG00000275066
6,809
652
ENSG00000276023
5_prime_UTR_variant
NA
NA
17
37,510,546
C
T
false
5_prime_UTR_variant
885
rs556724389
0.002623
0.001538
2.9267
5_prime_UTR_variant
5_prime_UTR_variant
ENSG00000276023
0
ENSG00000275066
4,898
0
ENSG00000276023
5_prime_UTR_variant
ENSG00000276023
666
ENSG00000275066
6,795
666
ENSG00000276023
5_prime_UTR_variant
NA
NA
17
37,510,570
G
A
false
5_prime_UTR_variant
885
rs191798576
0.000197
0.002449
12.552
5_prime_UTR_variant
5_prime_UTR_variant
ENSG00000276023
0
ENSG00000275066
4,874
0
ENSG00000276023
5_prime_UTR_variant
ENSG00000276023
690
ENSG00000275066
6,771
690
ENSG00000276023
5_prime_UTR_variant
NA
NA
17
37,577,539
T
C
false
missense_variant
837
rs12602536
0.000078
0.17944
82.76
missense_variant
missense_variant
ENSG00000275066
0
ENSG00000275066
0
0
ENSG00000275066
missense_variant
ENSG00000275066
7,873
ENSG00000275066
1,058
1,058
ENSG00000275066
missense_variant
NA
NA
17
37,611,979
C
A
false
3_prime_UTR_variant
918
rs12946700
0.002597
0.1626
90.503
3_prime_UTR_variant
3_prime_UTR_variant
ENSG00000278053
0
ENSG00000278053
130
0
ENSG00000278053
3_prime_UTR_variant
ENSG00000275066
2,506
ENSG00000277688
2,239
2,239
ENSG00000277688
3_prime_UTR_variant
NA
NA
17
37,687,414
G
A
true
splicing
923
rs3110641
0.994365
Urea
0.21634
17.347
intron_variant
dELS
ENSG00000275410
21
ENSG00000277501
3,161
21
ENSG00000275410
exon_proximal
ENSG00000278053
43,967
ENSG00000274244
38,280
38,280
ENSG00000274244
splicing
NA
splicing:b1
17
37,713,312
C
A
true
distal
874
rs17138478
1
ALT,AST,Alb,CRP,Cholelithiasis
0.12895
15.28
intron_variant
dELS
ENSG00000275410
2,648
ENSG00000275410
15,298
2,648
ENSG00000275410
dELS
ENSG00000275410
31,705
ENSG00000275410
20,504
20,504
ENSG00000275410
distal
NA
NA
17
37,869,513
A
C
true
distal
924
rs8081051
0.95772
GGT
0.40541
57.942
intron_variant
intron_variant
ENSG00000273513
54,901
ENSG00000276715
4,690
4,690
ENSG00000276715
intron_variant
ENSG00000273513
54,901
ENSG00000276715
14,284
14,284
ENSG00000276715
distal
NA
NA
17
38,296,352
C
G
false
tss_proximal
901
rs111576083
0.000472
0.074977
78.238
upstream_gene_variant
pELS
ENSG00000278845
670
ENSG00000277399
29,177
670
ENSG00000278845
tss_proximal
ENSG00000278845
670
ENSG00000277399
32,150
670
ENSG00000278845
tss_proximal
tss_prox:b1
tss_prox:b1
17
38,327,639
G
T
false
missense_variant
833
rs62073368
0.000381
0.023683
25.871
missense_variant
missense_variant
ENSG00000277399
0
ENSG00000277399
730
0
ENSG00000277399
missense_variant
ENSG00000277399
16,316
ENSG00000277399
863
863
ENSG00000277399
missense_variant
NA
NA
17
38,328,681
C
G
false
missense_variant
810
rs149998444
0.000308
0.00798
11.369
missense_variant
missense_variant
ENSG00000277399
0
ENSG00000277399
177
0
ENSG00000277399
missense_variant
ENSG00000277399
15,274
ENSG00000277399
177
177
ENSG00000277399
missense_variant
NA
NA
17
38,345,940
T
C
false
distal
905
rs192121086
0.000056
0.005191
10.864
intergenic_variant
intergenic_variant
ENSG00000277399
1,983
ENSG00000277399
2,092
1,983
ENSG00000277399
intergenic_variant
ENSG00000277399
1,983
ENSG00000277399
2,092
1,983
ENSG00000277399
distal
NA
NA
17
38,420,786
G
C
false
distal
884
rs35656980
0.000105
0.37254
50.893
intron_variant
dELS
ENSG00000275832
7,677
ENSG00000275832
1,386
1,386
ENSG00000275832
dELS
ENSG00000275832
7,677
ENSG00000275832
1,505
1,505
ENSG00000275832
distal
NA
NA
17
38,427,913
T
C
false
tss_proximal
897
rs113767048
0.007017
0.032753
43.436
intron_variant
pELS
ENSG00000275832
550
ENSG00000275832
8,513
550
ENSG00000275832
tss_proximal
ENSG00000275832
550
ENSG00000275832
8,632
550
ENSG00000275832
tss_proximal
tss_prox:b1
tss_prox:b1
17
38,428,092
C
A
false
tss_proximal
897
rs78325721
0.006295
0.028832
45.976
intron_variant
PLS_flank
ENSG00000275832
371
ENSG00000275832
8,692
371
ENSG00000275832
tss_proximal
ENSG00000275832
371
ENSG00000275832
8,811
371
ENSG00000275832
tss_proximal
tss_prox:b1
tss_prox:b1
17
38,452,555
A
G
false
tss_proximal
929
rs34624250
0.002759
0.10423
78.271
intron_variant
PLS_flank
ENSG00000275832
4,844
ENSG00000276170
110
110
ENSG00000276170
tss_proximal
ENSG00000275832
4,844
ENSG00000276170
110
110
ENSG00000276170
tss_proximal
tss_prox:b2
tss_prox:b2
17
38,458,241
C
T
false
missense_variant
823
rs151011696
0.000889
0.01062
34.606
missense_variant
missense_variant
ENSG00000275832
0
ENSG00000275832
0
0
ENSG00000275832
missense_variant
ENSG00000275832
840
ENSG00000275832
4,550
840
ENSG00000275832
missense_variant
NA
NA
17
38,481,747
T
C
false
tss_proximal
926
rs11079010
0.002122
0.12368
32.482
intron_variant
dELS
ENSG00000275832
274
ENSG00000275832
274
274
ENSG00000275832
tss_proximal
ENSG00000275832
8,714
ENSG00000275832
775
775
ENSG00000275832
tss_proximal
tss_prox:b2
tss_prox:b1
17
38,513,651
T
A
false
distal
919
rs7405566
0.000132
0.17844
42.787
intergenic_variant
CA_flank
ENSG00000275832
1,265
ENSG00000275832
3,532
1,265
ENSG00000275832
CA_flank
ENSG00000275832
15,857
ENSG00000275832
13,317
13,317
ENSG00000275832
distal
NA
NA
17
38,513,693
A
G
false
distal
919
rs7406725
0.000146
0.17775
42.616
intergenic_variant
CA_flank
ENSG00000275832
1,307
ENSG00000275832
3,574
1,307
ENSG00000275832
CA_flank
ENSG00000275832
15,899
ENSG00000275832
13,359
13,359
ENSG00000275832
distal
NA
NA
17
38,609,605
G
C
false
distal
875
rs7214959
0.000119
0.42036
60.333
intergenic_variant
dELS
ENSG00000277363
3,652
ENSG00000274996
6,903
3,652
ENSG00000277363
dELS
ENSG00000277363
3,652
ENSG00000274996
8,555
3,652
ENSG00000277363
distal
NA
NA
17
38,716,669
G
T
false
missense_variant
832
rs145966494
0.008644
0.008672
23.952
missense_variant
missense_variant
ENSG00000275023
0
ENSG00000275665
0
0
ENSG00000275023
missense_variant
ENSG00000275023
754
ENSG00000275023
840
754
ENSG00000275023
missense_variant
NA
NA
17
38,717,167
G
A
false
tss_proximal
899
rs138785746
0.000877
0.008011
16.84
intron_variant
dELS_flank
ENSG00000275023
185
ENSG00000275023
342
185
ENSG00000275023
tss_proximal
ENSG00000275023
256
ENSG00000275023
342
256
ENSG00000275023
tss_proximal
tss_prox:b1
tss_prox:b1
17
38,719,574
T
C
false
missense_variant
831
rs62620198
0.000077
0.011578
19.849
missense_variant
missense_variant
ENSG00000275023
0
ENSG00000275023
0
0
ENSG00000275023
missense_variant
ENSG00000275023
2,149
ENSG00000273627
116
116
ENSG00000273627
missense_variant
NA
NA
17
38,731,353
G
A
false
missense_variant
814
rs563305407
0.000094
0.002662
17.068
missense_variant
missense_variant
ENSG00000277972
0
ENSG00000277972
0
0
ENSG00000277972
missense_variant
ENSG00000277972
1,011
ENSG00000277972
245
245
ENSG00000277972
missense_variant
NA
NA
17
38,751,870
C
T
false
tss_proximal
903
rs228273
0.00252
0.35953
52.934
upstream_gene_variant
pELS
ENSG00000277791
870
ENSG00000277182
96
96
ENSG00000277182
tss_proximal
ENSG00000277791
870
ENSG00000277791
893
870
ENSG00000277791
tss_proximal
tss_prox:b1
tss_prox:b1
17
38,802,749
G
A
false
missense_variant
838
rs139189793
0.000438
0.012012
23.451
missense_variant
missense_variant
ENSG00000273559
0
ENSG00000273559
0
0
ENSG00000273559
missense_variant
ENSG00000276293
2,622
ENSG00000276293
3,226
2,622
ENSG00000276293
missense_variant
NA
NA
17
38,868,066
T
C
false
distal
839
rs979607
0.000913
0.21739
71.678
intergenic_variant
pELS
ENSG00000002834
1,792
ENSG00000002834
1,964
1,792
ENSG00000002834
pELS
ENSG00000002834
1,792
ENSG00000002834
1,964
1,792
ENSG00000002834
distal
NA
NA
17
38,870,542
G
C
false
tss_proximal
903
rs12939116
0.001365
0.35722
62.83
intron_variant
pELS
ENSG00000002834
283
ENSG00000002834
283
283
ENSG00000002834
tss_proximal
ENSG00000002834
398
ENSG00000002834
480
398
ENSG00000002834
tss_proximal
tss_prox:b1
tss_prox:b1
17
38,890,949
C
T
false
tss_proximal
925
rs567689078
0.000557
0.001367
8.9361
intron_variant
dELS_flank
ENSG00000002834
444
ENSG00000002834
444
444
ENSG00000002834
tss_proximal
ENSG00000002834
17,058
ENSG00000002834
714
714
ENSG00000002834
tss_proximal
tss_prox:b2
tss_prox:b1
17
38,994,738
C
T
false
distal
862
rs12939446
0.001356
0.47481
139.71
intergenic_variant
dELS_flank
ENSG00000204952
27,334
ENSG00000265428
1,584
1,584
ENSG00000265428
dELS_flank
ENSG00000204952
27,334
ENSG00000265428
1,885
1,885
ENSG00000265428
distal
NA
NA
17
38,994,835
G
A
false
distal
862
rs12947087
0.001355
0.47482
139.72
intergenic_variant
dELS_flank
ENSG00000204952
27,431
ENSG00000265428
1,487
1,487
ENSG00000265428
dELS_flank
ENSG00000204952
27,431
ENSG00000265428
1,788
1,788
ENSG00000265428
distal
NA
NA
17
38,998,764
T
C
false
distal
862
rs12949369
0.000871
0.4767
139.7
intergenic_variant
dELS_flank
ENSG00000204952
31,360
ENSG00000265428
2,139
2,139
ENSG00000265428
dELS_flank
ENSG00000204952
31,360
ENSG00000265428
2,139
2,139
ENSG00000265428
distal
NA
NA
17
39,052,647
C
T
false
distal
933
rs574053926
0.000072
0.001281
12.518
intron_variant
TF_flank
ENSG00000161381
10,665
ENSG00000214553
217
217
ENSG00000214553
TF_flank
ENSG00000161381
54,839
ENSG00000263818
4,371
4,371
ENSG00000263818
distal
NA
NA
17
39,053,275
A
G
false
distal
933
rs539145580
0.000468
0.001255
4.216
downstream_gene_variant
TF_flank
ENSG00000161381
10,037
ENSG00000214553
59
59
ENSG00000214553
TF_flank
ENSG00000161381
54,211
ENSG00000263818
3,743
3,743
ENSG00000263818
distal
NA
NA
17
39,092,543
T
C
false
distal
884
rs4328474
0.000337
0.38285
82.878
intron_variant
dELS
ENSG00000161381
4,840
ENSG00000286443
600
600
ENSG00000286443
dELS
ENSG00000161381
14,943
ENSG00000286443
5,566
5,566
ENSG00000286443
distal
NA
NA
17
39,144,124
C
A
false
distal
861
rs16505
0.0004
0.13594
79.163
intron_variant
dELS_flank
ENSG00000161381
4,291
ENSG00000161381
572
572
ENSG00000161381
dELS_flank
ENSG00000161381
7,512
ENSG00000161381
7,394
7,394
ENSG00000161381
distal
NA
NA
17
39,144,188
C
G
false
distal
861
rs645167
0.00019
0.14688
78.549
intron_variant
dELS_flank
ENSG00000161381
4,355
ENSG00000161381
508
508
ENSG00000161381
dELS_flank
ENSG00000161381
7,448
ENSG00000161381
7,330
7,330
ENSG00000161381
distal
NA
NA
17
39,154,219
G
C
false
tss_proximal
868
rs76638029
0.000263
0.025772
22.261
intron_variant
pELS_flank
ENSG00000161381
47
ENSG00000161381
986
47
ENSG00000161381
tss_proximal
ENSG00000161381
174
ENSG00000161381
986
174
ENSG00000161381
tss_proximal
tss_prox:b1
tss_prox:b0
17
39,203,699
T
C
false
distal
877
rs76704154
0.000574
0.33694
45.439
intron_variant
dELS
ENSG00000108298
377
ENSG00000108298
377
377
ENSG00000108298
dELS
ENSG00000108298
3,191
ENSG00000108298
2,683
2,683
ENSG00000108298
distal
NA
NA
17
39,636,360
G
A
false
3_prime_UTR_variant
913
rs9532
0.000543
0.013077
133.51
3_prime_UTR_variant
3_prime_UTR_variant
ENSG00000131771
0
ENSG00000131771
0
0
ENSG00000131771
3_prime_UTR_variant
ENSG00000131748
780
ENSG00000131748
729
729
ENSG00000131748
3_prime_UTR_variant
NA
NA
17
39,658,771
C
T
false
missense_variant
836
rs142935105
0.000589
0.003402
15.038
missense_variant
missense_variant
ENSG00000131748
0
ENSG00000131748
0
0
ENSG00000131748
missense_variant
ENSG00000131748
5,645
ENSG00000131748
217
217
ENSG00000131748
missense_variant
NA
NA
17
39,659,051
G
C
true
missense_variant
827
rs11556624
1
ApoA,HDLC
0.024679
54.487
missense_variant
missense_variant
ENSG00000131748
0
ENSG00000131748
0
0
ENSG00000131748
missense_variant
ENSG00000131748
5,925
ENSG00000131748
12
12
ENSG00000131748
missense_variant
NA
NA
17
39,723,335
A
G
true
missense_variant
828
rs1136201
0.99996
Hb,sCr
0.2479
90.83
missense_variant
missense_variant
ENSG00000141736
0
ENSG00000141736
0
0
ENSG00000141736
missense_variant
ENSG00000141736
5,905
ENSG00000265178
3,159
3,159
ENSG00000265178
missense_variant
NA
NA
17
39,740,603
C
T
false
tss_proximal
902
rs72832924
0.001564
0.18679
97.343
intron_variant
pELS
ENSG00000141738
421
ENSG00000141738
421
421
ENSG00000141738
tss_proximal
ENSG00000141738
635
ENSG00000141738
470
470
ENSG00000141738
tss_proximal
tss_prox:b1
tss_prox:b1
17
39,870,332
C
T
false
distal
844
rs117064469
0.000169
0.007767
82.287
intron_variant
pELS_flank
ENSG00000186075
361
ENSG00000161405
6,143
361
ENSG00000186075
pELS_flank
ENSG00000186075
2,115
ENSG00000161405
6,143
2,115
ENSG00000186075
distal
NA
NA
17
39,906,137
C
T
false
missense_variant
810
rs35266519
0.000539
0.008075
20.728
missense_variant
missense_variant
ENSG00000073605
0
ENSG00000073605
0
0
ENSG00000073605
missense_variant
ENSG00000073605
11,178
ENSG00000073605
198
198
ENSG00000073605
missense_variant
NA
NA
17
39,980,523
C
G
false
tss_proximal
899
rs141644442
0.000115
0.007883
8.9507
upstream_gene_variant
PLS
ENSG00000108344
283
ENSG00000108344
312
283
ENSG00000108344
tss_proximal
ENSG00000108344
283
ENSG00000108344
312
283
ENSG00000108344
tss_proximal
tss_prox:b1
tss_prox:b1
17
40,016,567
T
C
true
missense_variant
829
rs142286142
0.99992
Neutro,WBC
0.001704
14.263
missense_variant
missense_variant
ENSG00000108342
0
ENSG00000108342
0
0
ENSG00000108342
missense_variant
ENSG00000108342
1,079
ENSG00000108342
1,119
1,079
ENSG00000108342
missense_variant
NA
NA
17
40,022,073
A
T
false
tss_proximal
932
rs193125906
0.000071
0.002144
15.191
intron_variant
dELS_flank
ENSG00000008838
18
ENSG00000008838
18
18
ENSG00000008838
tss_proximal
ENSG00000008838
1,086
ENSG00000008838
368
368
ENSG00000008838
tss_proximal
tss_prox:b2
tss_prox:b0
17
40,022,426
G
A
false
missense_variant
814
rs149459087
0.000157
0.00344
12.546
missense_variant
missense_variant
ENSG00000008838
0
ENSG00000008838
0
0
ENSG00000008838
missense_variant
ENSG00000008838
733
ENSG00000008838
15
15
ENSG00000008838
missense_variant
NA
NA
17
40,161,140
C
T
false
tss_proximal
925
rs190828283
0.000413
0.001543
4.8295
intron_variant
pELS_flank
ENSG00000108349
612
ENSG00000108349
612
612
ENSG00000108349
tss_proximal
ENSG00000108352
15,869
ENSG00000108349
656
656
ENSG00000108349
tss_proximal
tss_prox:b2
tss_prox:b1
17
40,219,394
G
T
false
5_prime_UTR_variant
890
rs535395784
0.002807
0.020158
18.556
5_prime_UTR_variant
5_prime_UTR_variant
ENSG00000171475
0
ENSG00000171475
0
0
ENSG00000171475
5_prime_UTR_variant
ENSG00000171475
36
ENSG00000171475
67
36
ENSG00000171475
5_prime_UTR_variant
NA
NA
17
40,264,592
A
G
false
missense_variant
820
rs573490967
0.000118
0.006261
12.302
missense_variant
missense_variant
ENSG00000171475
0
ENSG00000171475
0
0
ENSG00000171475
missense_variant
ENSG00000094804
23,286
ENSG00000171475
8,203
8,203
ENSG00000171475
missense_variant
NA
NA
17
40,390,249
T
C
false
tss_proximal
867
rs139056940
0.004806
0.025701
314.43
intron_variant
pELS
ENSG00000131747
84
ENSG00000131747
84
84
ENSG00000131747
tss_proximal
ENSG00000131747
646
ENSG00000222881
1,088
646
ENSG00000131747
tss_proximal
tss_prox:b1
tss_prox:b0
17
40,391,616
C
T
false
missense_variant
827
rs34300454
0.003352
0.026012
309.59
missense_variant
missense_variant
ENSG00000131747
0
ENSG00000131747
0
0
ENSG00000131747
missense_variant
ENSG00000131747
2,013
ENSG00000222881
277
277
ENSG00000222881
missense_variant
NA
NA
17
40,447,297
A
G
true
distal
875
rs4890114
0.98834
IGF1
0.42806
66.435
intron_variant
dELS
ENSG00000141753
3,212
ENSG00000240125
7,379
3,212
ENSG00000141753
dELS
ENSG00000141753
3,846
ENSG00000240125
7,379
3,846
ENSG00000141753
distal
NA
NA
17
40,479,624
C
T
false
tss_proximal
869
rs72819648
0.000687
0.074572
105.13
intron_variant
dELS
ENSG00000131746
49
ENSG00000131746
49
49
ENSG00000131746
tss_proximal
ENSG00000131746
975
ENSG00000131746
387
387
ENSG00000131746
tss_proximal
tss_prox:b1
tss_prox:b0
17
40,560,108
G
A
true
tss_proximal
901
rs2290065
0.95855
Lym
0.064853
22.019
intron_variant
pELS
ENSG00000126353
570
ENSG00000266088
33,105
570
ENSG00000126353
tss_proximal
ENSG00000126353
904
ENSG00000266088
34,546
904
ENSG00000126353
tss_proximal
tss_prox:b1
tss_prox:b1
17
40,564,574
C
T
false
tss_proximal
901
rs74811341
0.000448
0.047954
21.229
intron_variant
pELS_flank
ENSG00000126353
825
ENSG00000279775
32,538
825
ENSG00000126353
tss_proximal
ENSG00000126353
884
ENSG00000279775
34,010
884
ENSG00000126353
tss_proximal
tss_prox:b1
tss_prox:b1
17
40,564,720
G
A
false
tss_proximal
901
rs78279284
0.000111
0.02862
19.133
intron_variant
pELS_flank
ENSG00000126353
679
ENSG00000279775
32,392
679
ENSG00000126353
tss_proximal
ENSG00000126353
738
ENSG00000279775
33,864
738
ENSG00000126353
tss_proximal
tss_prox:b1
tss_prox:b1
17
40,606,732
T
C
false
distal
876
rs148335357
0.000194
0.02322
52.995
intergenic_variant
dELS
ENSG00000073584
18,229
ENSG00000279775
8,146
8,146
ENSG00000279775
dELS
ENSG00000073584
39,103
ENSG00000279775
8,146
8,146
ENSG00000279775
distal
NA
NA
17
40,608,272
T
A
true
distal
876
rs112401631
1
DVT,Eosino,Lym
0.022898
23.412
intergenic_variant
dELS
ENSG00000073584
16,689
ENSG00000279775
9,686
9,686
ENSG00000279775
dELS
ENSG00000073584
37,563
ENSG00000279775
9,686
9,686
ENSG00000279775
distal
NA
NA
17
40,608,304
G
C
false
distal
876
rs79183289
0.000065
0.01103
129.7
intergenic_variant
dELS
ENSG00000073584
16,657
ENSG00000279775
9,718
9,718
ENSG00000279775
dELS
ENSG00000073584
37,531
ENSG00000279775
9,718
9,718
ENSG00000279775
distal
NA
NA
17
40,665,627
G
A
false
tss_proximal
899
rs187167368
0.001113
0.00818
26.831
upstream_gene_variant
TF
ENSG00000213424
449
ENSG00000213424
445
445
ENSG00000213424
tss_proximal
ENSG00000213424
449
ENSG00000213424
445
445
ENSG00000213424
tss_proximal
tss_prox:b1
tss_prox:b1
17
40,677,563
G
A
false
distal
928
rs72821867
0.004132
0.13344
33.122
intergenic_variant
CA-CTCF_flank
ENSG00000213424
12,385
ENSG00000224244
9,474
9,474
ENSG00000224244
CA-CTCF_flank
ENSG00000213424
12,385
ENSG00000224244
11,796
11,796
ENSG00000224244
distal
NA
NA
17
40,706,267
T
G
false
distal
846
rs71371444
0.000204
0.11695
88.154
intergenic_variant
dELS_flank
ENSG00000167916
2,514
ENSG00000229028
10,966
2,514
ENSG00000167916
dELS_flank
ENSG00000167916
2,514
ENSG00000229028
12,872
2,514
ENSG00000167916
distal
NA
NA
17
40,706,350
A
G
false
distal
846
rs35456013
0.000177
0.11738
88.34
intergenic_variant
dELS_flank
ENSG00000167916
2,597
ENSG00000229028
10,883
2,597
ENSG00000167916
dELS_flank
ENSG00000167916
2,597
ENSG00000229028
12,789
2,597
ENSG00000167916
distal
NA
NA
17
40,731,275
G
T
false
distal
876
rs62065866
0.000136
0.021458
26.262
intergenic_variant
dELS
ENSG00000204897
16,745
ENSG00000229028
9,342
9,342
ENSG00000229028
dELS
ENSG00000204897
24,055
ENSG00000229028
9,342
9,342
ENSG00000229028
distal
NA
NA
17
40,772,128
C
T
false
5_prime_UTR_variant
885
rs201482924
0.000021
0.000539
5.2052
5_prime_UTR_variant
5_prime_UTR_variant
ENSG00000186393
0
ENSG00000171446
4,679
0
ENSG00000186393
5_prime_UTR_variant
ENSG00000186393
72
ENSG00000171446
5,891
72
ENSG00000186393
5_prime_UTR_variant
NA
NA
17
40,772,178
A
C
false
5_prime_UTR_variant
885
rs189976028
0.000081
0.00317
32.216
5_prime_UTR_variant
5_prime_UTR_variant
ENSG00000186393
0
ENSG00000171446
4,629
0
ENSG00000186393
5_prime_UTR_variant
ENSG00000186393
22
ENSG00000171446
5,841
22
ENSG00000186393
5_prime_UTR_variant
NA
NA
17
40,779,624
C
T
false
missense_variant
837
rs17558532
0.000102
0.17957
69.246
missense_variant
missense_variant
ENSG00000171446
0
ENSG00000171446
1,603
0
ENSG00000171446
missense_variant
ENSG00000171446
2,925
ENSG00000171446
1,603
1,603
ENSG00000171446
missense_variant
NA
NA
17
40,782,339
C
G
false
missense_variant
826
rs2469826
0.000669
0.26392
81.558
missense_variant
missense_variant
ENSG00000171446
0
ENSG00000171446
4,318
0
ENSG00000171446
missense_variant
ENSG00000171446
210
ENSG00000171446
4,318
210
ENSG00000171446
missense_variant
NA
NA
17
40,849,702
C
T
false
distal
841
rs2469816
0.000309
0.39133
176.87
intergenic_variant
pELS
ENSG00000187242
11,600
ENSG00000265359
1,097
1,097
ENSG00000265359
pELS
ENSG00000187242
17,497
ENSG00000265359
1,097
1,097
ENSG00000265359
distal
NA
NA
17
40,867,144
G
A
false
missense_variant
825
rs11650915
0.000258
0.33833
147.08
missense_variant
missense_variant
ENSG00000187242
0
ENSG00000187242
619
0
ENSG00000187242
missense_variant
ENSG00000187242
55
ENSG00000187242
619
55
ENSG00000187242
missense_variant
NA
NA
17
40,899,174
A
G
false
distal
907
rs62065931
0.000136
0.006678
20.145
intergenic_variant
intergenic_variant
ENSG00000171431
13,931
ENSG00000171431
14,263
13,931
ENSG00000171431
intergenic_variant
ENSG00000171431
13,931
ENSG00000171431
14,263
13,931
ENSG00000171431
distal
NA
NA
17
40,935,828
C
T
false
tss_proximal
903
rs2872964
0.000183
0.35893
144.52
intron_variant
pELS
ENSG00000108244
379
ENSG00000108244
379
379
ENSG00000108244
tss_proximal
ENSG00000108244
561
ENSG00000108244
1,006
561
ENSG00000108244
tss_proximal
tss_prox:b1
tss_prox:b1
17
40,936,616
G
A
false
5_prime_UTR_variant
892
rs2269858
0.000078
0.2405
122.62
5_prime_UTR_variant
5_prime_UTR_variant
ENSG00000108244
0
ENSG00000108244
0
0
ENSG00000108244
5_prime_UTR_variant
ENSG00000108244
225
ENSG00000108244
218
218
ENSG00000108244
5_prime_UTR_variant
NA
NA
17
40,978,276
G
A
false
missense_variant
813
rs16968862
0.000167
0.1158
159.01
missense_variant
missense_variant
ENSG00000204889
0
ENSG00000204889
0
0
ENSG00000204889
missense_variant
ENSG00000204889
6,049
ENSG00000204889
8,724
6,049
ENSG00000204889
missense_variant
NA
NA
17
40,978,837
G
A
false
missense_variant
813
rs11649834
0.000192
0.13685
218.48
missense_variant
missense_variant
ENSG00000204889
0
ENSG00000204889
0
0
ENSG00000204889
missense_variant
ENSG00000204889
5,488
ENSG00000204889
8,163
5,488
ENSG00000204889
missense_variant
NA
NA
17
41,018,423
C
A
false
tss_proximal
929
rs12602858
0.000243
0.10294
162
intron_variant
CA_flank
ENSG00000221852
7,602
ENSG00000212901
842
842
ENSG00000212901
tss_proximal
ENSG00000221852
8,784
ENSG00000212901
900
900
ENSG00000212901
tss_proximal
tss_prox:b2
tss_prox:b2
17
41,019,007
A
T
false
tss_proximal
929
rs7214011
0.000239
0.103
161.98
intron_variant
CA_flank
ENSG00000221852
7,018
ENSG00000212901
258
258
ENSG00000212901
tss_proximal
ENSG00000221852
8,200
ENSG00000212901
316
316
ENSG00000212901
tss_proximal
tss_prox:b2
tss_prox:b2
17
41,019,465
G
A
false
tss_proximal
929
rs113336484
0.000246
0.10291
162
upstream_gene_variant
CA_flank
ENSG00000221852
6,560
ENSG00000212901
140
140
ENSG00000212901
tss_proximal
ENSG00000221852
7,742
ENSG00000212901
140
140
ENSG00000212901
tss_proximal
tss_prox:b2
tss_prox:b2
17
41,019,822
G
A
false
tss_proximal
929
rs8074224
0.000247
0.10291
162
upstream_gene_variant
CA
ENSG00000221852
6,203
ENSG00000212901
497
497
ENSG00000212901
tss_proximal
ENSG00000221852
7,385
ENSG00000212901
497
497
ENSG00000212901
tss_proximal
tss_prox:b2
tss_prox:b2
17
41,019,960
T
A
false
tss_proximal
929
rs8080036
0.000293
0.10067
161.17
upstream_gene_variant
dELS_flank
ENSG00000221852
6,065
ENSG00000212901
635
635
ENSG00000212901
tss_proximal
ENSG00000221852
7,247
ENSG00000212901
635
635
ENSG00000212901
tss_proximal
tss_prox:b2
tss_prox:b2
17
41,059,767
G
A
false
missense_variant
815
rs12937861
0.000537
0.12213
210.21
missense_variant
missense_variant
ENSG00000212724
0
ENSG00000237230
12,178
0
ENSG00000212724
missense_variant
ENSG00000212724
346
ENSG00000237230
12,178
346
ENSG00000212724
missense_variant
NA
NA
17
41,082,998
T
A
false
distal
844
rs140263835
0.000053
0.012874
42.06
intergenic_variant
pELS_flank
ENSG00000240871
1,151
ENSG00000287602
7,339
1,151
ENSG00000240871
pELS_flank
ENSG00000240871
1,151
ENSG00000287602
7,339
1,151
ENSG00000240871
distal
NA
NA
17
41,108,586
C
G
false
distal
857
rs143755596
0.000311
0.006034
20.736
intergenic_variant
dELS_flank
ENSG00000212722
2,097
ENSG00000287602
15,339
2,097
ENSG00000212722
dELS_flank
ENSG00000212722
3,196
ENSG00000287602
18,247
3,196
ENSG00000212722
distal
NA
NA
17
41,370,206
C
T
false
tss_proximal
901
rs113346725
0.000109
0.03817
110.67
upstream_gene_variant
pELS
ENSG00000131738
392
ENSG00000234859
32,209
392
ENSG00000131738
tss_proximal
ENSG00000131738
392
ENSG00000234859
32,209
392
ENSG00000131738
tss_proximal
tss_prox:b1
tss_prox:b1
17
41,370,375
C
T
false
tss_proximal
901
rs78063979
0.000109
0.03817
110.67
upstream_gene_variant
pELS_flank
ENSG00000131738
561
ENSG00000234859
32,040
561
ENSG00000131738
tss_proximal
ENSG00000131738
561
ENSG00000234859
32,040
561
ENSG00000131738
tss_proximal
tss_prox:b1
tss_prox:b1
17
41,395,511
G
A
false
missense_variant
830
rs112544857
0.000046
0.023994
90.425
missense_variant
missense_variant
ENSG00000094796
0
ENSG00000234859
6,904
0
ENSG00000094796
missense_variant
ENSG00000094796
2,096
ENSG00000234859
6,904
2,096
ENSG00000094796
missense_variant
NA
NA
17
41,396,004
C
T
false
distal
844
rs80269162
0.000044
0.013383
46.344
intron_variant
pELS_flank
ENSG00000094796
380
ENSG00000234859
6,411
380
ENSG00000094796
pELS_flank
ENSG00000094796
1,603
ENSG00000234859
6,411
1,603
ENSG00000094796
distal
NA
NA
17
41,424,564
G
C
false
5_prime_UTR_variant
891
rs72485487
0.002614
0.17144
406.34
5_prime_UTR_variant
5_prime_UTR_variant
ENSG00000108417
0
ENSG00000234859
0
0
ENSG00000108417
5_prime_UTR_variant
ENSG00000108417
20
ENSG00000225438
12,788
20
ENSG00000108417
5_prime_UTR_variant
NA
NA
17
41,429,744
C
T
false
distal
919
rs76012296
0.00289
0.17155
406.07
intergenic_variant
CA_flank
ENSG00000108417
5,158
ENSG00000234859
4,694
4,694
ENSG00000234859
CA_flank
ENSG00000108417
5,158
ENSG00000225438
17,968
5,158
ENSG00000108417
distal
NA
NA
17
41,437,516
A
G
false
missense_variant
815
rs897416
0.000074
0.09788
94.472
missense_variant
missense_variant
ENSG00000171360
0
ENSG00000236473
10,666
0
ENSG00000171360
missense_variant
ENSG00000171360
3,466
ENSG00000236473
16,538
3,466
ENSG00000171360
missense_variant
NA
NA