Datasets:

marin-dna
/

evals_complex_traits

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Split (2)

train · 11.6k rows

chrom stringclasses 12 values	pos int64 36.1k 249M	ref stringclasses 4 values	alt stringclasses 4 values	label bool 2 classes	subset stringclasses 8 values	match_group int64 0 2.16k	rsid stringlengths 3 15	pip float64 0 1	traits stringclasses 279 values	MAF float64 0 0.5	ld_score float64 1.01 3.79k	consequence stringclasses 13 values	consequence_cre stringclasses 29 values	exon_closest_pc_gene_id stringlengths 15 15	distance_exon_pc int64 0 1.68M	exon_closest_nc_gene_id stringlengths 15 15	distance_exon_nc int64 0 507k	distance_exon int64 0 507k	exon_closest_gene_id stringlengths 15 15	consequence_final stringclasses 28 values	tss_closest_pc_gene_id stringlengths 15 15	distance_tss_pc int64 0 1.69M	tss_closest_nc_gene_id stringlengths 15 15	distance_tss_nc int64 0 531k	distance_tss int64 0 531k	tss_closest_gene_id stringlengths 15 15	consequence_group stringclasses 8 values	distance_tss_pc_bin stringclasses 4 values	distance_exon_pc_bin stringclasses 7 values
17	45,996,373	G	A	false	splicing	922	rs62063850	0.000542		0.22586	3,788.5	intron_variant	dELS_flank	ENSG00000186868	25	ENSG00000186868	25	25	ENSG00000186868	exon_proximal	ENSG00000256762	2,876	ENSG00000186868	10,713	2,876	ENSG00000256762	splicing	NA	splicing:b1
17	46,171,482	G	A	false	missense_variant	837	17:44248848:G:A	0.003325		0.18114	378.04	missense_variant	missense_variant	ENSG00000120071	0	ENSG00000120071	0	0	ENSG00000120071	missense_variant	ENSG00000120071	65	ENSG00000120071	258	65	ENSG00000120071	missense_variant	NA	NA
17	46,171,730	A	C	false	synonymous_variant	895	rs17662889	0.000743		0.19102	3,333.4	synonymous_variant	synonymous_variant	ENSG00000120071	0	ENSG00000120071	0	0	ENSG00000120071	synonymous_variant	ENSG00000120071	313	ENSG00000120071	506	313	ENSG00000120071	synonymous_variant	NA	NA
17	46,285,770	G	C	false	3_prime_UTR_variant	915	rs62073169	0.002018		0.34616	637.36	3_prime_UTR_variant	3_prime_UTR_variant	ENSG00000228696	0	ENSG00000289729	146	0	ENSG00000228696	3_prime_UTR_variant	ENSG00000176681	6,962	ENSG00000289729	1,195	1,195	ENSG00000289729	3_prime_UTR_variant	NA	NA
17	46,829,583	T	C	true	distal	850	rs8069437	0.96268	MAP,RBC	0.23254	292.85	intron_variant	dELS_flank	ENSG00000158955	3,617	ENSG00000108379	1,011	1,011	ENSG00000108379	dELS_flank	ENSG00000158955	3,617	ENSG00000108379	3,449	3,449	ENSG00000108379	distal	NA	NA
17	46,935,905	T	C	true	3_prime_UTR_variant	914	rs17608766	0.99507	PP,SBP	0.14725	206.58	3_prime_UTR_variant	3_prime_UTR_variant	ENSG00000108433	0	ENSG00000108433	370	0	ENSG00000108433	3_prime_UTR_variant	ENSG00000108433	3,722	ENSG00000108433	2,699	2,699	ENSG00000108433	3_prime_UTR_variant	NA	NA
17	46,978,935	G	T	false	missense_variant	834	rs79497126	0.002434		0.10704	134.5	missense_variant	missense_variant	ENSG00000179673	0	ENSG00000263142	163	0	ENSG00000179673	missense_variant	ENSG00000179673	317	ENSG00000263142	453	317	ENSG00000179673	missense_variant	NA	NA
17	47,189,066	C	G	false	tss_proximal	869	rs11079761	0.001594		0.073779	108.78	intron_variant	PLS	ENSG00000004897	79	ENSG00000004897	79	79	ENSG00000004897	tss_proximal	ENSG00000004897	109	ENSG00000004897	129	109	ENSG00000004897	tss_proximal	tss_prox:b1	tss_prox:b0
17	47,291,140	C	T	false	missense_variant	819	rs375746929	0.000187		0.000193	1.6182	missense_variant	missense_variant	ENSG00000259207	0	ENSG00000259207	0	0	ENSG00000259207	missense_variant	ENSG00000178852	32,149	ENSG00000259207	86	86	ENSG00000259207	missense_variant	NA	NA
17	47,291,156	T	G	false	missense_variant	819	rs116362814	0.000097		0.000035	113.57	missense_variant	missense_variant	ENSG00000259207	0	ENSG00000259207	0	0	ENSG00000259207	missense_variant	ENSG00000178852	32,133	ENSG00000259207	102	102	ENSG00000259207	missense_variant	NA	NA
17	47,506,318	A	T	false	distal	907	rs142855540	0.000161		0.015858	146.45	intergenic_variant	intergenic_variant	ENSG00000141279	16,623	ENSG00000228782	13,824	13,824	ENSG00000228782	intergenic_variant	ENSG00000141279	16,623	ENSG00000228782	13,824	13,824	ENSG00000228782	distal	NA	NA
17	47,538,966	T	C	false	distal	875	rs4497739	0.001899		0.429	423.94	intron_variant	dELS	ENSG00000141279	6,942	ENSG00000141279	6,942	6,942	ENSG00000141279	dELS	ENSG00000141279	7,696	ENSG00000141279	7,577	7,577	ENSG00000141279	distal	NA	NA
17	47,717,340	A	G	true	distal	851	rs1808192	0.9467	TP	0.33134	272.28	intergenic_variant	dELS_flank	ENSG00000198933	5,287	ENSG00000073861	16,084	5,287	ENSG00000198933	dELS_flank	ENSG00000073861	15,895	ENSG00000073861	16,084	15,895	ENSG00000073861	distal	NA	NA
17	47,733,988	C	G	true	tss_proximal	869	rs41444548	0.999965	AG,NAP,TP	0.075944	135.85	intron_variant	pELS	ENSG00000073861	42	ENSG00000073861	42	42	ENSG00000073861	tss_proximal	ENSG00000073861	751	ENSG00000073861	562	562	ENSG00000073861	tss_proximal	tss_prox:b1	tss_prox:b0
17	47,834,936	C	T	false	3_prime_UTR_variant	918	rs11079797	0.001694		0.15875	149.71	3_prime_UTR_variant	3_prime_UTR_variant	ENSG00000141294	402	ENSG00000141294	0	0	ENSG00000141294	3_prime_UTR_variant	ENSG00000141294	3,265	ENSG00000141294	2,764	2,764	ENSG00000141294	3_prime_UTR_variant	NA	NA
17	47,837,037	G	A	false	missense_variant	838	rs145648581	0.00019		0.010861	21.574	missense_variant	missense_variant	ENSG00000141294	0	ENSG00000141294	0	0	ENSG00000141294	missense_variant	ENSG00000141295	2,557	ENSG00000141295	2,909	2,557	ENSG00000141295	missense_variant	NA	NA
17	47,840,230	A	G	false	missense_variant	814	rs111736975	0.000104		0.003013	32.429	missense_variant	missense_variant	ENSG00000141295	0	ENSG00000141295	0	0	ENSG00000141295	missense_variant	ENSG00000141295	634	ENSG00000141295	282	282	ENSG00000141295	missense_variant	NA	NA
17	47,857,398	A	G	false	distal	844	rs144522617	0.00545		0.006543	16.262	intergenic_variant	pELS_flank	ENSG00000189120	1,523	ENSG00000264243	5,943	1,523	ENSG00000189120	pELS_flank	ENSG00000189120	1,523	ENSG00000264243	5,943	1,523	ENSG00000189120	distal	NA	NA
17	47,883,499	T	C	false	distal	842	rs11654010	0.006894		0.34459	285.42	intergenic_variant	pELS	ENSG00000167182	12,650	ENSG00000266821	1,100	1,100	ENSG00000266821	pELS	ENSG00000167182	12,650	ENSG00000266821	1,100	1,100	ENSG00000266821	distal	NA	NA
17	47,971,226	A	G	false	missense_variant	811	rs2905846	0.001004		0.2634	293.5	missense_variant	missense_variant	ENSG00000108465	0	ENSG00000108465	0	0	ENSG00000108465	missense_variant	ENSG00000108465	74	ENSG00000108465	14	14	ENSG00000108465	missense_variant	NA	NA
17	48,039,777	A	G	false	distal	905	rs150324254	0.00008		0.009799	61.439	intergenic_variant	intergenic_variant	ENSG00000005243	1,746	ENSG00000005243	2,003	1,746	ENSG00000005243	intergenic_variant	ENSG00000005243	1,746	ENSG00000005243	2,003	1,746	ENSG00000005243	distal	NA	NA
17	48,061,847	T	G	false	distal	843	rs8182234	0.00085		0.1839	240.14	downstream_gene_variant	pELS_flank	ENSG00000082641	301	ENSG00000266341	1,177	301	ENSG00000082641	pELS_flank	ENSG00000082641	2,969	ENSG00000266341	1,177	1,177	ENSG00000266341	distal	NA	NA
17	48,062,117	C	T	false	distal	839	rs72825504	0.005619		0.21244	282.12	downstream_gene_variant	pELS	ENSG00000082641	571	ENSG00000266341	1,447	571	ENSG00000082641	pELS	ENSG00000082641	3,239	ENSG00000266341	1,447	1,447	ENSG00000266341	distal	NA	NA
17	48,211,287	A	T	true	distal	928	rs56161855	0.96574	BW	0.1322	240.34	intron_variant	CA-CTCF_flank	ENSG00000141293	21,786	ENSG00000263787	6,757	6,757	ENSG00000263787	CA-CTCF_flank	ENSG00000141293	26,107	ENSG00000207306	14,500	14,500	ENSG00000207306	distal	NA	NA
17	48,413,527	T	A	true	distal	852	rs192894638	0.947735	FEV1FVC	0.28417	267.29	intron_variant	dELS_flank	ENSG00000141293	16,547	ENSG00000141293	16,547	16,547	ENSG00000141293	dELS_flank	ENSG00000141293	16,686	ENSG00000141293	16,747	16,686	ENSG00000141293	distal	NA	NA
17	48,428,334	A	G	false	distal	839	rs7211712	0.002191		0.21538	401.55	intron_variant	pELS	ENSG00000141293	1,740	ENSG00000141293	1,740	1,740	ENSG00000141293	pELS	ENSG00000141293	1,879	ENSG00000141293	1,940	1,879	ENSG00000141293	distal	NA	NA
17	48,450,876	T	G	false	distal	858	rs35387091	0.003001		0.21758	397.21	intergenic_variant	dELS_flank	ENSG00000141293	20,656	ENSG00000264451	9,493	9,493	ENSG00000264451	dELS_flank	ENSG00000141293	20,656	ENSG00000264451	9,493	9,493	ENSG00000264451	distal	NA	NA
17	48,451,013	T	C	false	distal	858	rs35767434	0.002942		0.21758	397.21	intergenic_variant	dELS_flank	ENSG00000141293	20,793	ENSG00000264451	9,356	9,356	ENSG00000264451	dELS_flank	ENSG00000141293	20,793	ENSG00000264451	9,356	9,356	ENSG00000264451	distal	NA	NA
17	48,451,167	A	G	false	distal	858	rs34771639	0.002947		0.21758	397.21	intergenic_variant	dELS_flank	ENSG00000141293	20,947	ENSG00000264451	9,202	9,202	ENSG00000264451	dELS_flank	ENSG00000141293	20,947	ENSG00000264451	9,202	9,202	ENSG00000264451	distal	NA	NA
17	48,463,165	G	A	false	distal	881	rs182892683	0.000078		0.0012	14.338	intron_variant	dELS	ENSG00000141293	32,945	ENSG00000264451	2,281	2,281	ENSG00000264451	dELS	ENSG00000141293	32,945	ENSG00000264451	2,794	2,794	ENSG00000264451	distal	NA	NA
17	48,524,678	A	G	false	distal	857	rs541515282	0.000911		0.004284	22.861	intergenic_variant	dELS_flank	ENSG00000120094	3,847	ENSG00000173917	16,215	3,847	ENSG00000120094	dELS_flank	ENSG00000120094	6,231	ENSG00000173917	18,467	6,231	ENSG00000120094	distal	NA	NA
17	48,524,759	A	T	false	distal	857	rs56322138	0.000222		0.009198	26.314	intergenic_variant	dELS_flank	ENSG00000120094	3,766	ENSG00000173917	16,134	3,766	ENSG00000120094	dELS_flank	ENSG00000120094	6,150	ENSG00000173917	18,386	6,150	ENSG00000120094	distal	NA	NA
17	48,524,916	G	A	false	distal	857	rs35304128	0.000007		0.000039	3.3747	intergenic_variant	dELS_flank	ENSG00000120094	3,609	ENSG00000173917	15,977	3,609	ENSG00000120094	dELS_flank	ENSG00000120094	5,993	ENSG00000173917	18,229	5,993	ENSG00000120094	distal	NA	NA
17	48,543,363	T	A	false	missense_variant	831	rs183316427	0.000126		0.013347	23.412	missense_variant	missense_variant	ENSG00000173917	0	ENSG00000173917	0	0	ENSG00000173917	missense_variant	ENSG00000173917	1,745	ENSG00000230148	187	187	ENSG00000230148	missense_variant	NA	NA
17	48,552,231	G	T	false	missense_variant	826	rs2229304	0.002715		0.29847	267.13	missense_variant	missense_variant	ENSG00000120093	0	ENSG00000230148	980	0	ENSG00000120093	missense_variant	ENSG00000120093	1,690	ENSG00000233101	2,600	1,690	ENSG00000120093	missense_variant	NA	NA
17	48,592,068	C	T	true	3_prime_UTR_variant	915	rs9299	0.97357	BMI	0.34219	218.01	3_prime_UTR_variant	3_prime_UTR_variant	ENSG00000120075	0	ENSG00000233101	223	0	ENSG00000120075	3_prime_UTR_variant	ENSG00000120075	1,710	ENSG00000233101	223	223	ENSG00000233101	3_prime_UTR_variant	NA	NA
17	48,637,669	C	G	false	distal	840	rs877507	0.000166		0.021035	38.756	intron_variant	pELS	ENSG00000170689	11,310	ENSG00000272763	675	675	ENSG00000272763	pELS	ENSG00000170689	11,310	ENSG00000272763	1,440	1,440	ENSG00000272763	distal	NA	NA
17	48,934,535	C	T	false	missense_variant	824	rs57901004	0.008565		0.47026	297.74	missense_variant	missense_variant	ENSG00000159210	1,188	ENSG00000159210	0	0	ENSG00000159210	missense_variant	ENSG00000159210	10,274	ENSG00000159210	943	943	ENSG00000159210	missense_variant	NA	NA
17	48,963,251	G	A	false	distal	854	rs1973407	0.001697		0.27319	258.92	intron_variant	dELS_flank	ENSG00000159224	1,058	ENSG00000238804	6,497	1,058	ENSG00000159224	dELS_flank	ENSG00000159224	5,344	ENSG00000238804	6,497	5,344	ENSG00000159224	distal	NA	NA
17	49,229,006	C	T	false	tss_proximal	868	rs34692121	0.000711		0.024342	43.031	intron_variant	pELS_flank	ENSG00000173868	67	ENSG00000177369	1,846	67	ENSG00000173868	tss_proximal	ENSG00000173868	135	ENSG00000177369	1,846	135	ENSG00000173868	tss_proximal	tss_prox:b1	tss_prox:b0
17	49,370,013	T	C	true	tss_proximal	929	rs17637241	0.99994	SHBG,Testosterone_M	0.10456	73.977	upstream_gene_variant	pELS	ENSG00000198740	7,539	ENSG00000248714	14	14	ENSG00000248714	tss_proximal	ENSG00000198740	7,539	ENSG00000262039	726	726	ENSG00000262039	tss_proximal	tss_prox:b2	tss_prox:b2
17	49,486,488	C	T	false	distal	879	rs376409326	0.000011		0.000971	2.5476	intergenic_variant	dELS	ENSG00000064300	8,804	ENSG00000279036	7,734	7,734	ENSG00000279036	dELS	ENSG00000064300	8,804	ENSG00000279036	11,311	8,804	ENSG00000064300	distal	NA	NA
17	49,486,980	C	A	true	distal	879	rs528027135	0.99997	MCH	0.001466	10.675	intergenic_variant	dELS	ENSG00000064300	8,312	ENSG00000279036	7,242	7,242	ENSG00000279036	dELS	ENSG00000064300	8,312	ENSG00000279036	10,819	8,312	ENSG00000064300	distal	NA	NA
17	49,487,048	C	T	false	distal	879	rs577494486	0.000014		0.000758	5.0741	intergenic_variant	dELS	ENSG00000064300	8,244	ENSG00000279036	7,174	7,174	ENSG00000279036	dELS	ENSG00000064300	8,244	ENSG00000279036	10,751	8,244	ENSG00000064300	distal	NA	NA
17	49,487,071	G	A	false	distal	879	rs111601393	0.000011		0.000209	9.812	intergenic_variant	dELS	ENSG00000064300	8,221	ENSG00000279036	7,151	7,151	ENSG00000279036	dELS	ENSG00000064300	8,221	ENSG00000279036	10,728	8,221	ENSG00000064300	distal	NA	NA
17	49,487,100	C	G	false	distal	879	rs553568756	0.00008		0.001694	5.5256	intergenic_variant	dELS	ENSG00000064300	8,192	ENSG00000279036	7,122	7,122	ENSG00000279036	dELS	ENSG00000064300	8,192	ENSG00000279036	10,699	8,192	ENSG00000064300	distal	NA	NA
17	49,487,473	T	C	false	distal	879	rs538686752	0.000013		0.000683	4.2076	intergenic_variant	dELS	ENSG00000064300	7,819	ENSG00000279036	6,749	6,749	ENSG00000279036	dELS	ENSG00000064300	7,819	ENSG00000279036	10,326	7,819	ENSG00000064300	distal	NA	NA
17	49,507,367	A	C	false	distal	884	rs613495	0.003383		0.37561	42.324	intron_variant	dELS	ENSG00000064300	708	ENSG00000249906	866	708	ENSG00000064300	dELS	ENSG00000064300	9,975	ENSG00000277478	3,449	3,449	ENSG00000277478	distal	NA	NA
17	49,864,016	T	G	false	distal	880	rs78633990	0.000012		0.000052	27.292	intergenic_variant	dELS	ENSG00000176358	15,946	ENSG00000204584	15,178	15,178	ENSG00000204584	dELS	ENSG00000176358	15,946	ENSG00000176358	15,998	15,946	ENSG00000176358	distal	NA	NA
17	49,864,045	T	C	false	distal	880	rs538018238	0.000496		0.002787	7.6283	intergenic_variant	dELS	ENSG00000176358	15,975	ENSG00000204584	15,207	15,207	ENSG00000204584	dELS	ENSG00000176358	15,975	ENSG00000176358	16,027	15,975	ENSG00000176358	distal	NA	NA
17	49,864,062	A	T	false	distal	880	rs115690860	0.000008		0.000046	33.651	intergenic_variant	dELS	ENSG00000176358	15,992	ENSG00000204584	15,224	15,224	ENSG00000204584	dELS	ENSG00000176358	15,992	ENSG00000176358	16,044	15,992	ENSG00000176358	distal	NA	NA
17	49,864,068	C	T	false	distal	880	rs76083295	0.000008		0.000023	22.856	intergenic_variant	dELS	ENSG00000176358	15,998	ENSG00000204584	15,230	15,230	ENSG00000204584	dELS	ENSG00000176358	15,998	ENSG00000176358	16,050	15,998	ENSG00000176358	distal	NA	NA
17	49,864,094	C	T	true	distal	880	rs568948954	0.99999	ALP	0.001113	4.4419	intergenic_variant	dELS	ENSG00000176358	16,024	ENSG00000204584	15,256	15,256	ENSG00000204584	dELS	ENSG00000176358	16,024	ENSG00000176358	16,076	16,024	ENSG00000176358	distal	NA	NA
17	49,936,711	T	C	true	distal	881	rs544307728	0.998855	MCV	0.001593	4.3891	intergenic_variant	dELS	ENSG00000108813	32,478	ENSG00000249176	2,410	2,410	ENSG00000249176	dELS	ENSG00000108813	32,478	ENSG00000249176	2,410	2,410	ENSG00000249176	distal	NA	NA
17	50,076,560	T	C	false	tss_proximal	930	rs2301627	0.001942		0.11215	73.172	intron_variant	dELS_flank	ENSG00000005884	23	ENSG00000005884	23	23	ENSG00000005884	tss_proximal	ENSG00000005884	64	ENSG00000005884	839	64	ENSG00000005884	tss_proximal	tss_prox:b0	tss_prox:b0
17	50,110,182	G	C	false	3_prime_UTR_variant	914	rs61328000	0.000362		0.15034	38.77	3_prime_UTR_variant	3_prime_UTR_variant	ENSG00000005882	0	ENSG00000005882	0	0	ENSG00000005882	3_prime_UTR_variant	ENSG00000005882	5,857	ENSG00000005882	2,173	2,173	ENSG00000005882	3_prime_UTR_variant	NA	NA
17	50,149,928	G	A	false	synonymous_variant	894	rs111354487	0.006927		0.039955	10.44	synonymous_variant	synonymous_variant	ENSG00000108819	0	ENSG00000236472	3,751	0	ENSG00000108819	synonymous_variant	ENSG00000108819	748	ENSG00000108819	4,775	748	ENSG00000108819	synonymous_variant	NA	NA
17	50,166,375	G	A	false	tss_proximal	903	rs2412299	0.002734		0.36139	39.012	intron_variant	pELS	ENSG00000108823	297	ENSG00000108823	238	238	ENSG00000108823	tss_proximal	ENSG00000108823	333	ENSG00000108823	333	333	ENSG00000108823	tss_proximal	tss_prox:b1	tss_prox:b1
17	50,186,542	A	G	false	tss_proximal	931	rs2277632	0.001035		0.14008	28.315	intron_variant	dELS_flank	ENSG00000108821	34	ENSG00000108821	34	34	ENSG00000108821	tss_proximal	ENSG00000108821	13,648	ENSG00000108821	579	579	ENSG00000108821	tss_proximal	tss_prox:b2	tss_prox:b0
17	50,199,194	G	A	false	tss_proximal	867	rs73987449	0.000084		0.0251	14.159	intron_variant	dELS_flank	ENSG00000108821	31	ENSG00000108821	83	31	ENSG00000108821	tss_proximal	ENSG00000108821	996	ENSG00000108821	491	491	ENSG00000108821	tss_proximal	tss_prox:b1	tss_prox:b0
17	50,200,388	C	A	false	tss_proximal	902	rs1800012	0.002508		0.18584	22.702	intron_variant	pELS	ENSG00000108821	196	ENSG00000108821	440	196	ENSG00000108821	tss_proximal	ENSG00000108821	196	ENSG00000249406	511	196	ENSG00000108821	tss_proximal	tss_prox:b1	tss_prox:b1
17	50,201,570	C	T	false	5_prime_UTR_variant	889	rs2734278	0.000194		0.004646	11.755	5_prime_UTR_variant	5_prime_UTR_variant	ENSG00000108821	0	ENSG00000108821	0	0	ENSG00000108821	5_prime_UTR_variant	ENSG00000108821	60	ENSG00000108821	61	60	ENSG00000108821	5_prime_UTR_variant	NA	NA
17	50,211,035	G	A	false	distal	884	rs2246839	0.000186		0.38106	34.29	intron_variant	dELS	ENSG00000108821	9,403	ENSG00000249406	232	232	ENSG00000249406	dELS	ENSG00000108821	9,403	ENSG00000249406	2,062	2,062	ENSG00000249406	distal	NA	NA
17	50,225,230	G	T	false	distal	921	rs2696306	0.000501		0.08965	34.388	intergenic_variant	CA_flank	ENSG00000108821	23,598	ENSG00000249406	9,307	9,307	ENSG00000249406	CA_flank	ENSG00000108821	23,598	ENSG00000263176	9,872	9,872	ENSG00000263176	distal	NA	NA
17	50,238,795	A	G	false	distal	881	rs74726250	0.000012		0.000614	31.999	intergenic_variant	dELS	ENSG00000167105	32,610	ENSG00000249838	2,665	2,665	ENSG00000249838	dELS	ENSG00000167105	32,610	ENSG00000249838	2,949	2,949	ENSG00000249838	distal	NA	NA
17	50,289,343	A	G	false	distal	842	rs2412302	0.000308		0.32879	30.707	intergenic_variant	pELS	ENSG00000167105	7,857	ENSG00000251179	1,487	1,487	ENSG00000251179	pELS	ENSG00000167105	14,876	ENSG00000251179	1,487	1,487	ENSG00000251179	distal	NA	NA
17	50,345,097	G	A	false	distal	839	rs76924269	0.000129		0.21162	108.88	intergenic_variant	pELS	ENSG00000015532	1,028	ENSG00000015532	1,038	1,028	ENSG00000015532	pELS	ENSG00000015532	1,028	ENSG00000015532	1,038	1,028	ENSG00000015532	distal	NA	NA
17	50,353,853	G	A	false	missense_variant	812	rs145954495	0.000202		0.006546	9.5342	missense_variant	missense_variant	ENSG00000015532	0	ENSG00000015532	0	0	ENSG00000015532	missense_variant	ENSG00000015532	3,312	ENSG00000015532	2,330	2,330	ENSG00000015532	missense_variant	NA	NA
17	50,354,963	G	C	false	missense_variant	828	rs12451299	0.005029		0.24348	127.56	missense_variant	missense_variant	ENSG00000015532	0	ENSG00000015532	0	0	ENSG00000015532	missense_variant	ENSG00000015532	2,202	ENSG00000015532	1,220	1,220	ENSG00000015532	missense_variant	NA	NA
17	50,360,499	G	A	false	3_prime_UTR_variant	911	rs140413577	0.000078		0.007087	9.9248	3_prime_UTR_variant	3_prime_UTR_variant	ENSG00000015532	0	ENSG00000015532	0	0	ENSG00000015532	3_prime_UTR_variant	ENSG00000015532	3,332	ENSG00000015532	1,520	1,520	ENSG00000015532	3_prime_UTR_variant	NA	NA
17	50,375,395	T	C	false	missense_variant	832	rs17714854	0.000474		0.01007	120.69	missense_variant	missense_variant	ENSG00000154920	0	ENSG00000154920	0	0	ENSG00000154920	missense_variant	ENSG00000154920	209	ENSG00000154920	713	209	ENSG00000154920	missense_variant	NA	NA
17	50,375,415	A	C	false	missense_variant	834	rs3760413	0.003224		0.11116	62.876	missense_variant	missense_variant	ENSG00000154920	0	ENSG00000154920	0	0	ENSG00000154920	missense_variant	ENSG00000154920	229	ENSG00000154920	693	229	ENSG00000154920	missense_variant	NA	NA
17	50,469,432	A	G	false	tss_proximal	904	rs3809765	0.000385		0.46739	106.01	intron_variant	pELS	ENSG00000136457	525	ENSG00000167107	473	473	ENSG00000167107	tss_proximal	ENSG00000136457	525	ENSG00000167107	473	473	ENSG00000167107	tss_proximal	tss_prox:b1	tss_prox:b1
17	50,518,627	G	C	false	missense_variant	837	rs8064455	0.000889		0.17461	44.578	missense_variant	missense_variant	ENSG00000136449	0	ENSG00000136449	0	0	ENSG00000136449	missense_variant	ENSG00000136449	5,092	ENSG00000136449	782	782	ENSG00000136449	missense_variant	NA	NA
17	50,523,574	C	T	false	tss_proximal	866	rs147653149	0.000207		0.002986	9.3314	intron_variant	dELS	ENSG00000136449	22	ENSG00000136449	22	22	ENSG00000136449	tss_proximal	ENSG00000136449	145	ENSG00000136449	2,398	145	ENSG00000136449	tss_proximal	tss_prox:b1	tss_prox:b0
17	50,526,142	C	T	false	missense_variant	824	rs9890721	0.000114		0.47098	73.198	missense_variant	missense_variant	ENSG00000136449	0	ENSG00000250286	0	0	ENSG00000136449	missense_variant	ENSG00000136449	2,421	ENSG00000136449	168	168	ENSG00000136449	missense_variant	NA	NA
17	50,549,221	G	C	false	tss_proximal	932	rs200365010	0.000076		0.001967	7.3688	intron_variant	pELS_flank	ENSG00000006282	34	ENSG00000006282	34	34	ENSG00000006282	tss_proximal	ENSG00000006282	1,171	ENSG00000006282	337	337	ENSG00000006282	tss_proximal	tss_prox:b2	tss_prox:b0
17	50,550,799	A	G	false	missense_variant	831	rs62621401	0.00238		0.014175	23.271	missense_variant	missense_variant	ENSG00000006282	0	ENSG00000006282	0	0	ENSG00000006282	missense_variant	ENSG00000006282	2,749	ENSG00000006282	64	64	ENSG00000006282	missense_variant	NA	NA
17	50,552,097	A	G	false	missense_variant	811	rs8065903	0.000204		0.26169	90.707	missense_variant	missense_variant	ENSG00000006282	0	ENSG00000006282	0	0	ENSG00000006282	missense_variant	ENSG00000006282	4,047	ENSG00000006282	1,362	1,362	ENSG00000006282	missense_variant	NA	NA
17	50,561,087	C	A	false	5_prime_UTR_variant	886	rs547688355	0.000076		0.005438	21.117	5_prime_UTR_variant	5_prime_UTR_variant	ENSG00000006283	0	ENSG00000006283	372	0	ENSG00000006283	5_prime_UTR_variant	ENSG00000006283	0	ENSG00000006283	372	0	ENSG00000006283	5_prime_UTR_variant	NA	NA
17	50,612,439	G	A	false	distal	883	rs3785914	0.000503		0.36494	41.54	intron_variant	dELS	ENSG00000006283	2,503	ENSG00000006283	2,503	2,503	ENSG00000006283	dELS	ENSG00000006283	12,713	ENSG00000251239	19,500	12,713	ENSG00000006283	distal	NA	NA
17	50,761,614	T	C	false	distal	849	rs60845236	0.000008		0.000596	51.103	intron_variant	dELS_flank	ENSG00000167117	107	ENSG00000167117	107	107	ENSG00000167117	dELS_flank	ENSG00000167117	5,298	ENSG00000167117	5,902	5,298	ENSG00000167117	distal	NA	NA
17	50,799,662	C	G	false	distal	881	rs9900049	0.000013		0.00035	27.13	intergenic_variant	dELS	ENSG00000167117	32,104	ENSG00000248702	2,010	2,010	ENSG00000248702	dELS	ENSG00000167117	32,104	ENSG00000248702	2,010	2,010	ENSG00000248702	distal	NA	NA
17	50,799,903	A	G	false	distal	881	rs9901362	0.000015		0.00033	38.384	intergenic_variant	dELS	ENSG00000167117	32,345	ENSG00000248702	2,251	2,251	ENSG00000248702	dELS	ENSG00000167117	32,345	ENSG00000248702	2,251	2,251	ENSG00000248702	distal	NA	NA
17	50,799,931	G	T	false	distal	881	rs76538132	0.000009		0.000149	19.981	intergenic_variant	dELS	ENSG00000167117	32,373	ENSG00000248702	2,279	2,279	ENSG00000248702	dELS	ENSG00000167117	32,373	ENSG00000248702	2,279	2,279	ENSG00000248702	distal	NA	NA
17	50,800,350	G	A	false	distal	881	rs79637612	0.000013		0.000329	31.331	intergenic_variant	dELS	ENSG00000167117	32,792	ENSG00000248702	2,698	2,698	ENSG00000248702	dELS	ENSG00000167117	32,792	ENSG00000248702	2,698	2,698	ENSG00000248702	distal	NA	NA
17	50,800,413	C	T	false	distal	881	rs766313444	0.000008		0.000679	11.776	intergenic_variant	dELS	ENSG00000167117	32,855	ENSG00000248702	2,761	2,761	ENSG00000248702	dELS	ENSG00000167117	32,855	ENSG00000248702	2,761	2,761	ENSG00000248702	distal	NA	NA
17	50,836,117	C	T	false	synonymous_variant	894	rs77632597	0.000408		0.063469	54.928	synonymous_variant	synonymous_variant	ENSG00000173714	0	ENSG00000261976	3,939	0	ENSG00000173714	synonymous_variant	ENSG00000173714	530	ENSG00000261976	5,508	530	ENSG00000173714	synonymous_variant	NA	NA
17	51,155,392	C	G	false	distal	843	rs35347299	0.001525		0.18113	126.02	intron_variant	pELS_flank	ENSG00000239672	258	ENSG00000239672	258	258	ENSG00000239672	pELS_flank	ENSG00000239672	1,347	ENSG00000239672	1,054	1,054	ENSG00000239672	distal	NA	NA
17	51,164,112	C	A	false	distal	905	rs147772898	0.000132		0.005497	22.219	intergenic_variant	intergenic_variant	ENSG00000243678	1,322	ENSG00000239672	2,076	1,322	ENSG00000243678	intergenic_variant	ENSG00000243678	1,322	ENSG00000243678	2,324	1,322	ENSG00000243678	distal	NA	NA
17	51,164,113	T	A	false	distal	905	rs139519494	0.000138		0.005493	22.234	intergenic_variant	intergenic_variant	ENSG00000243678	1,321	ENSG00000239672	2,077	1,321	ENSG00000243678	intergenic_variant	ENSG00000243678	1,321	ENSG00000243678	2,323	1,321	ENSG00000243678	distal	NA	NA
17	51,167,386	G	C	false	tss_proximal	903	rs4605213	0.001144		0.35753	132.15	intron_variant	pELS_flank	ENSG00000243678	429	ENSG00000243678	66	66	ENSG00000243678	tss_proximal	ENSG00000243678	821	ENSG00000243678	632	632	ENSG00000243678	tss_proximal	tss_prox:b1	tss_prox:b1
17	51,192,773	C	A	false	missense_variant	822	rs117564084	0.000784		0.002607	5.1193	missense_variant	missense_variant	ENSG00000011258	0	ENSG00000011258	0	0	ENSG00000011258	missense_variant	ENSG00000011258	16,630	ENSG00000011258	242	242	ENSG00000011258	missense_variant	NA	NA
17	52,180,568	A	G	false	distal	908	rs9908649	0.007027		0.3319	213.41	intergenic_variant	intergenic_variant	ENSG00000154975	20,550	ENSG00000154975	22,504	20,550	ENSG00000154975	intergenic_variant	ENSG00000154975	20,550	ENSG00000154975	22,504	20,550	ENSG00000154975	distal	NA	NA
17	52,184,596	A	T	false	distal	908	rs34327448	0.001877		0.32928	211.02	intergenic_variant	intergenic_variant	ENSG00000154975	24,578	ENSG00000154975	26,532	24,578	ENSG00000154975	intergenic_variant	ENSG00000154975	24,578	ENSG00000154975	26,532	24,578	ENSG00000154975	distal	NA	NA
17	54,906,947	T	C	false	distal	849	rs148222736	0.000034		0.001537	8.3067	intron_variant	dELS_flank	ENSG00000141198	160	ENSG00000141198	160	160	ENSG00000141198	dELS_flank	ENSG00000141198	5,812	ENSG00000141198	6,083	5,812	ENSG00000141198	distal	NA	NA
17	54,907,010	G	T	false	distal	849	rs561670964	0.000029		0.001197	6.5125	intron_variant	dELS_flank	ENSG00000141198	223	ENSG00000141198	223	223	ENSG00000141198	dELS_flank	ENSG00000141198	5,875	ENSG00000141198	6,146	5,875	ENSG00000141198	distal	NA	NA
17	54,942,339	C	A	false	missense_variant	838	rs117455270	0.000078		0.010567	20.353	missense_variant	missense_variant	ENSG00000141198	3,318	ENSG00000141198	0	0	ENSG00000141198	missense_variant	ENSG00000141198	3,414	ENSG00000141198	3,557	3,414	ENSG00000141198	missense_variant	NA	NA
17	54,968,711	C	G	false	tss_proximal	930	rs17209882	0.000207		0.11628	106.5	upstream_gene_variant	PLS	ENSG00000166260	7	ENSG00000166263	15	7	ENSG00000166260	tss_proximal	ENSG00000166260	7	ENSG00000166263	15	7	ENSG00000166260	tss_proximal	tss_prox:b0	tss_prox:b0
17	55,267,665	T	C	false	5_prime_UTR_variant	889	rs559122453	0.000034		0.004744	13.419	5_prime_UTR_variant	5_prime_UTR_variant	ENSG00000108924	0	ENSG00000108924	0	0	ENSG00000108924	5_prime_UTR_variant	ENSG00000108924	73	ENSG00000108924	49	49	ENSG00000108924	5_prime_UTR_variant	NA	NA

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