chrom stringclasses 12
values | pos int64 36.1k 249M | ref stringclasses 4
values | alt stringclasses 4
values | label bool 2
classes | subset stringclasses 8
values | match_group int64 0 2.16k | rsid stringlengths 3 15 | pip float64 0 1 | traits stringclasses 279
values | MAF float64 0 0.5 | ld_score float64 1.01 3.79k | consequence stringclasses 13
values | consequence_cre stringclasses 29
values | exon_closest_pc_gene_id stringlengths 15 15 | distance_exon_pc int64 0 1.68M | exon_closest_nc_gene_id stringlengths 15 15 | distance_exon_nc int64 0 507k | distance_exon int64 0 507k | exon_closest_gene_id stringlengths 15 15 | consequence_final stringclasses 28
values | tss_closest_pc_gene_id stringlengths 15 15 | distance_tss_pc int64 0 1.69M | tss_closest_nc_gene_id stringlengths 15 15 | distance_tss_nc int64 0 531k | distance_tss int64 0 531k | tss_closest_gene_id stringlengths 15 15 | consequence_group stringclasses 8
values | distance_tss_pc_bin stringclasses 4
values | distance_exon_pc_bin stringclasses 7
values |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
17 | 66,453,129 | C | T | false | distal | 871 | rs74329859 | 0.000048 | 0.001984 | 51.046 | intron_variant | dELS | ENSG00000154229 | 43,071 | ENSG00000289587 | 511 | 511 | ENSG00000289587 | dELS | ENSG00000154229 | 150,515 | ENSG00000289587 | 10,095 | 10,095 | ENSG00000289587 | distal | NA | NA | |
17 | 66,454,744 | C | G | false | distal | 871 | rs548603262 | 0.000077 | 0.002249 | 6.4443 | intron_variant | dELS | ENSG00000154229 | 41,456 | ENSG00000289587 | 2,126 | 2,126 | ENSG00000289587 | dELS | ENSG00000154229 | 152,130 | ENSG00000289587 | 8,480 | 8,480 | ENSG00000289587 | distal | NA | NA | |
17 | 66,454,770 | G | A | false | distal | 871 | rs78538448 | 0.000106 | 0.001907 | 51.807 | intron_variant | dELS | ENSG00000154229 | 41,430 | ENSG00000289587 | 2,152 | 2,152 | ENSG00000289587 | dELS | ENSG00000154229 | 152,156 | ENSG00000289587 | 8,454 | 8,454 | ENSG00000289587 | distal | NA | NA | |
17 | 66,823,938 | A | G | false | distal | 906 | rs7216222 | 0.000041 | 0.44913 | 37.598 | intergenic_variant | intergenic_variant | ENSG00000075429 | 11,178 | ENSG00000207943 | 36,769 | 11,178 | ENSG00000075429 | intergenic_variant | ENSG00000075429 | 11,178 | ENSG00000207943 | 36,865 | 11,178 | ENSG00000075429 | distal | NA | NA | |
17 | 66,905,474 | G | A | false | distal | 876 | rs111393274 | 0.000024 | 0.025577 | 14.651 | intergenic_variant | dELS | ENSG00000075429 | 10,722 | ENSG00000251764 | 9,901 | 9,901 | ENSG00000251764 | dELS | ENSG00000075429 | 28,200 | ENSG00000251764 | 9,982 | 9,982 | ENSG00000251764 | distal | NA | NA | |
17 | 66,964,399 | A | G | false | non_coding_transcript_exon_variant | 863 | rs72846227 | 0.009466 | 0.4994 | 49.371 | non_coding_transcript_exon_variant | non_coding_transcript_exon_variant | ENSG00000075461 | 307 | ENSG00000289877 | 0 | 0 | ENSG00000289877 | non_coding_transcript_exon_variant | ENSG00000075461 | 307 | ENSG00000289877 | 120 | 120 | ENSG00000289877 | non_coding_transcript_exon_variant | NA | NA | |
17 | 67,279,835 | T | C | false | distal | 862 | rs1806937 | 0.00216 | 0.46008 | 129.98 | intergenic_variant | dELS_flank | ENSG00000198265 | 33,845 | ENSG00000264093 | 3,483 | 3,483 | ENSG00000264093 | dELS_flank | ENSG00000198265 | 33,845 | ENSG00000264093 | 3,483 | 3,483 | ENSG00000264093 | distal | NA | NA | |
17 | 67,411,721 | A | G | false | distal | 881 | rs572508605 | 0.000224 | 0.001546 | 6.1885 | intron_variant | dELS | ENSG00000154217 | 32,328 | ENSG00000201547 | 2,839 | 2,839 | ENSG00000201547 | dELS | ENSG00000154217 | 32,754 | ENSG00000201547 | 2,839 | 2,839 | ENSG00000201547 | distal | NA | NA | |
17 | 67,578,167 | A | G | false | splicing | 923 | rs2570035 | 0.00921 | 0.18405 | 25.772 | intron_variant | dELS | ENSG00000154217 | 18 | ENSG00000154217 | 18 | 18 | ENSG00000154217 | exon_proximal | ENSG00000154217 | 120,628 | ENSG00000154217 | 24,980 | 24,980 | ENSG00000154217 | splicing | NA | splicing:b1 | |
17 | 68,019,745 | T | C | false | distal | 852 | rs6504572 | 0.004201 | 0.28913 | 350.76 | intergenic_variant | dELS_flank | ENSG00000182481 | 15,890 | ENSG00000182481 | 15,892 | 15,890 | ENSG00000182481 | dELS_flank | ENSG00000182481 | 15,890 | ENSG00000182481 | 15,892 | 15,890 | ENSG00000182481 | distal | NA | NA | |
17 | 68,019,847 | T | C | false | distal | 852 | rs6504573 | 0.004469 | 0.28925 | 350.79 | intergenic_variant | dELS_flank | ENSG00000182481 | 15,788 | ENSG00000182481 | 15,790 | 15,788 | ENSG00000182481 | dELS_flank | ENSG00000182481 | 15,788 | ENSG00000182481 | 15,790 | 15,788 | ENSG00000182481 | distal | NA | NA | |
17 | 68,035,784 | T | C | false | 5_prime_UTR_variant | 888 | rs12752 | 0.001056 | 0.25364 | 380.79 | 5_prime_UTR_variant | 5_prime_UTR_variant | ENSG00000182481 | 0 | ENSG00000182481 | 0 | 0 | ENSG00000182481 | 5_prime_UTR_variant | ENSG00000182481 | 48 | ENSG00000182481 | 53 | 48 | ENSG00000182481 | 5_prime_UTR_variant | NA | NA | |
17 | 68,180,420 | A | G | false | distal | 858 | rs12450426 | 0.00006 | 0.20966 | 138.46 | intergenic_variant | dELS_flank | ENSG00000196704 | 25,060 | ENSG00000278740 | 8,126 | 8,126 | ENSG00000278740 | dELS_flank | ENSG00000196704 | 25,060 | ENSG00000278740 | 8,126 | 8,126 | ENSG00000278740 | distal | NA | NA | |
17 | 68,196,953 | T | C | false | distal | 841 | rs1558137 | 0.000111 | 0.39827 | 191.27 | intergenic_variant | pELS | ENSG00000196704 | 8,527 | ENSG00000267472 | 1,967 | 1,967 | ENSG00000267472 | pELS | ENSG00000196704 | 8,527 | ENSG00000267472 | 1,967 | 1,967 | ENSG00000267472 | distal | NA | NA | |
17 | 68,203,729 | C | T | false | distal | 905 | rs570332175 | 0.00012 | 0.004651 | 17.337 | intergenic_variant | intergenic_variant | ENSG00000196704 | 1,751 | ENSG00000274712 | 1,759 | 1,751 | ENSG00000196704 | intergenic_variant | ENSG00000196704 | 1,751 | ENSG00000274712 | 1,759 | 1,751 | ENSG00000196704 | distal | NA | NA | |
17 | 68,209,126 | T | C | false | distal | 850 | rs34593162 | 0.000108 | 0.23717 | 157.6 | intron_variant | dELS_flank | ENSG00000196704 | 2,887 | ENSG00000274712 | 1,632 | 1,632 | ENSG00000274712 | dELS_flank | ENSG00000196704 | 3,644 | ENSG00000274712 | 3,456 | 3,456 | ENSG00000274712 | distal | NA | NA | |
17 | 68,223,258 | G | A | false | distal | 852 | rs12952627 | 0.000247 | 0.29264 | 141.94 | intron_variant | dELS_flank | ENSG00000196704 | 17,019 | ENSG00000274712 | 15,764 | 15,764 | ENSG00000274712 | dELS_flank | ENSG00000196704 | 17,776 | ENSG00000274712 | 17,588 | 17,588 | ENSG00000274712 | distal | NA | NA | |
17 | 68,223,262 | A | C | false | distal | 852 | rs12941495 | 0.000247 | 0.29264 | 141.93 | intron_variant | dELS_flank | ENSG00000196704 | 17,023 | ENSG00000274712 | 15,768 | 15,768 | ENSG00000274712 | dELS_flank | ENSG00000196704 | 17,780 | ENSG00000274712 | 17,592 | 17,592 | ENSG00000274712 | distal | NA | NA | |
17 | 68,231,307 | A | C | false | distal | 880 | rs751070853 | 0.000076 | 0.003106 | 10.712 | intron_variant | dELS | ENSG00000196704 | 16,622 | ENSG00000265100 | 15,318 | 15,318 | ENSG00000265100 | dELS | ENSG00000196704 | 16,622 | ENSG00000265100 | 16,630 | 16,622 | ENSG00000196704 | distal | NA | NA | |
17 | 68,231,787 | G | A | false | distal | 880 | rs569697422 | 0.000259 | 0.003277 | 10.205 | intron_variant | dELS | ENSG00000196704 | 16,142 | ENSG00000265100 | 14,838 | 14,838 | ENSG00000265100 | dELS | ENSG00000196704 | 16,142 | ENSG00000265100 | 16,150 | 16,142 | ENSG00000196704 | distal | NA | NA | |
17 | 68,282,985 | G | A | false | splicing | 923 | rs8081494 | 0.00256 | 0.15025 | 73.187 | intron_variant | dELS | ENSG00000108932 | 11 | ENSG00000141337 | 8,420 | 11 | ENSG00000108932 | exon_proximal | ENSG00000108932 | 8,130 | ENSG00000141337 | 23,583 | 8,130 | ENSG00000108932 | splicing | NA | splicing:b1 | |
17 | 68,283,150 | C | A | false | splicing | 923 | rs61237346 | 0.001809 | 0.20447 | 80.53 | intron_variant | dELS_flank | ENSG00000108932 | 26 | ENSG00000141337 | 8,585 | 26 | ENSG00000108932 | exon_proximal | ENSG00000108932 | 7,965 | ENSG00000141337 | 23,748 | 7,965 | ENSG00000108932 | splicing | NA | splicing:b1 | |
17 | 68,351,332 | C | T | false | distal | 873 | rs184573551 | 0.000054 | 0.008169 | 9.3082 | intron_variant | dELS | ENSG00000141337 | 242 | ENSG00000141337 | 242 | 242 | ENSG00000141337 | dELS | ENSG00000141337 | 59,813 | ENSG00000141337 | 4,186 | 4,186 | ENSG00000141337 | distal | NA | NA | |
17 | 68,352,419 | C | T | false | distal | 873 | rs537024275 | 0.000068 | 0.002759 | 13.356 | intron_variant | dELS | ENSG00000141337 | 732 | ENSG00000141337 | 732 | 732 | ENSG00000141337 | dELS | ENSG00000141337 | 60,900 | ENSG00000141337 | 5,273 | 5,273 | ENSG00000141337 | distal | NA | NA | |
17 | 68,501,045 | T | C | false | distal | 879 | rs559241685 | 0.000269 | 0.001172 | 10.775 | intron_variant | dELS | ENSG00000108946 | 10,734 | ENSG00000267009 | 7,374 | 7,374 | ENSG00000267009 | dELS | ENSG00000108946 | 10,734 | ENSG00000108946 | 11,369 | 10,734 | ENSG00000108946 | distal | NA | NA | |
17 | 68,502,820 | C | A | false | distal | 860 | rs111984398 | 0.003251 | 0.17578 | 74.746 | intron_variant | dELS_flank | ENSG00000108946 | 8,959 | ENSG00000267009 | 9,149 | 8,959 | ENSG00000108946 | dELS_flank | ENSG00000108946 | 8,959 | ENSG00000108946 | 9,594 | 8,959 | ENSG00000108946 | distal | NA | NA | |
17 | 68,503,542 | A | C | false | distal | 927 | rs4471747 | 0.008811 | 0.31567 | 65.855 | intron_variant | CA-CTCF | ENSG00000108946 | 8,237 | ENSG00000108946 | 8,872 | 8,237 | ENSG00000108946 | CA-CTCF | ENSG00000108946 | 8,237 | ENSG00000108946 | 8,872 | 8,237 | ENSG00000108946 | distal | NA | NA | |
17 | 68,519,522 | T | C | false | distal | 847 | rs7217296 | 0.000688 | 0.34351 | 72.762 | intron_variant | dELS_flank | ENSG00000108946 | 3,233 | ENSG00000267009 | 3,233 | 3,233 | ENSG00000108946 | dELS_flank | ENSG00000108946 | 4,121 | ENSG00000108946 | 3,291 | 3,291 | ENSG00000108946 | distal | NA | NA | |
17 | 68,790,617 | G | A | false | distal | 871 | rs550954131 | 0.000063 | 0.001737 | 7.2731 | intergenic_variant | dELS | ENSG00000141338 | 76,671 | ENSG00000267250 | 2,931 | 2,931 | ENSG00000267250 | dELS | ENSG00000141338 | 154,256 | ENSG00000267250 | 7,204 | 7,204 | ENSG00000267250 | distal | NA | NA | |
17 | 68,794,603 | T | A | false | distal | 871 | rs143189272 | 0.002816 | 0.0032 | 6.3867 | intron_variant | dELS | ENSG00000141338 | 72,685 | ENSG00000267250 | 898 | 898 | ENSG00000267250 | dELS | ENSG00000141338 | 150,270 | ENSG00000267250 | 3,218 | 3,218 | ENSG00000267250 | distal | NA | NA | |
17 | 68,875,525 | A | C | false | distal | 933 | rs144305951 | 0.000267 | 0.008522 | 10.21 | intron_variant | TF_flank | ENSG00000141338 | 88 | ENSG00000141338 | 788 | 88 | ENSG00000141338 | TF_flank | ENSG00000141338 | 69,348 | ENSG00000141338 | 2,120 | 2,120 | ENSG00000141338 | distal | NA | NA | |
17 | 68,875,938 | C | T | false | distal | 933 | rs148743502 | 0.001359 | 0.001248 | 4.3413 | intron_variant | TF_flank | ENSG00000141338 | 204 | ENSG00000141338 | 375 | 204 | ENSG00000141338 | TF_flank | ENSG00000141338 | 68,935 | ENSG00000141338 | 1,707 | 1,707 | ENSG00000141338 | distal | NA | NA | |
17 | 69,079,220 | G | A | false | missense_variant | 820 | rs145490715 | 0.000359 | 0.000327 | 3.9628 | missense_variant | missense_variant | ENSG00000154262 | 0 | ENSG00000154262 | 0 | 0 | ENSG00000154262 | missense_variant | ENSG00000154258 | 18,270 | ENSG00000154262 | 8,397 | 8,397 | ENSG00000154262 | missense_variant | NA | NA | |
17 | 69,085,137 | A | G | true | missense_variant | 833 | rs77542162 | 1 | AG,ALP,Alb,ApoB,Ca,Hb,Ht,IGF1,LDLC,MCH,MCV,Plt,TC,TP,UA | 0.023057 | 50.041 | missense_variant | missense_variant | ENSG00000154262 | 0 | ENSG00000154262 | 0 | 0 | ENSG00000154262 | missense_variant | ENSG00000154258 | 24,187 | ENSG00000154262 | 2,480 | 2,480 | ENSG00000154262 | missense_variant | NA | NA |
17 | 69,086,821 | C | G | true | tss_proximal | 931 | rs740516 | 1 | ApoB,LDLC,TC | 0.15016 | 89.253 | intron_variant | CA-CTCF | ENSG00000154262 | 85 | ENSG00000154262 | 85 | 85 | ENSG00000154262 | tss_proximal | ENSG00000154258 | 25,871 | ENSG00000154262 | 796 | 796 | ENSG00000154262 | tss_proximal | tss_prox:b2 | tss_prox:b0 |
17 | 69,303,469 | T | C | false | tss_proximal | 926 | rs77922900 | 0.000062 | 0.12391 | 96.173 | intron_variant | CA-H3K4me3_flank | ENSG00000154265 | 562 | ENSG00000154265 | 619 | 562 | ENSG00000154265 | tss_proximal | ENSG00000154265 | 5,850 | ENSG00000154265 | 619 | 619 | ENSG00000154265 | tss_proximal | tss_prox:b2 | tss_prox:b1 | |
17 | 69,303,644 | G | T | false | tss_proximal | 926 | rs75140143 | 0.000062 | 0.12383 | 96.194 | intron_variant | intron_variant | ENSG00000154265 | 449 | ENSG00000154265 | 794 | 449 | ENSG00000154265 | tss_proximal | ENSG00000154265 | 5,675 | ENSG00000154265 | 794 | 794 | ENSG00000154265 | tss_proximal | tss_prox:b2 | tss_prox:b1 | |
17 | 69,387,497 | G | A | false | distal | 908 | rs333928 | 0.000423 | 0.34487 | 113.69 | intergenic_variant | intergenic_variant | ENSG00000108984 | 27,199 | ENSG00000108984 | 27,213 | 27,199 | ENSG00000108984 | intergenic_variant | ENSG00000108984 | 27,199 | ENSG00000108984 | 27,213 | 27,199 | ENSG00000108984 | distal | NA | NA | |
17 | 69,598,320 | A | T | false | distal | 872 | rs527737322 | 0.000268 | 0.004061 | 13.76 | intron_variant | dELS | ENSG00000108984 | 44,454 | ENSG00000227517 | 3,379 | 3,379 | ENSG00000227517 | dELS | ENSG00000108984 | 95,890 | ENSG00000227517 | 3,453 | 3,453 | ENSG00000227517 | distal | NA | NA | |
17 | 69,901,143 | G | A | true | distal | 856 | rs75503064 | 0.994225 | HbA1c | 0.078802 | 81.227 | intron_variant | dELS_flank | ENSG00000153822 | 152,285 | ENSG00000227517 | 1,598 | 1,598 | ENSG00000227517 | dELS_flank | ENSG00000153822 | 152,285 | ENSG00000237560 | 60,424 | 60,424 | ENSG00000237560 | distal | NA | NA |
17 | 69,905,927 | C | T | false | distal | 856 | rs75552063 | 0.000211 | 0.066551 | 135.81 | intergenic_variant | dELS_flank | ENSG00000153822 | 147,501 | ENSG00000227517 | 2,926 | 2,926 | ENSG00000227517 | dELS_flank | ENSG00000153822 | 147,501 | ENSG00000237560 | 55,640 | 55,640 | ENSG00000237560 | distal | NA | NA | |
17 | 70,074,900 | T | C | false | tss_proximal | 898 | rs9916313 | 0.000087 | 0.14377 | 174.21 | intron_variant | PLS_flank | ENSG00000153822 | 324 | ENSG00000153822 | 345 | 324 | ENSG00000153822 | tss_proximal | ENSG00000153822 | 324 | ENSG00000153822 | 345 | 324 | ENSG00000153822 | tss_proximal | tss_prox:b1 | tss_prox:b1 | |
17 | 70,307,054 | T | C | false | distal | 856 | rs78804406 | 0.000177 | 0.09774 | 79.824 | intergenic_variant | dELS_flank | ENSG00000123700 | 127,009 | ENSG00000267109 | 5,776 | 5,776 | ENSG00000267109 | dELS_flank | ENSG00000123700 | 137,521 | ENSG00000267109 | 61,861 | 61,861 | ENSG00000267109 | distal | NA | NA | |
17 | 70,317,345 | C | A | false | distal | 856 | rs17715862 | 0.000325 | 0.051004 | 38.703 | intron_variant | dELS_flank | ENSG00000123700 | 137,300 | ENSG00000267109 | 3,956 | 3,956 | ENSG00000267109 | dELS_flank | ENSG00000123700 | 147,812 | ENSG00000267109 | 51,570 | 51,570 | ENSG00000267109 | distal | NA | NA | |
17 | 70,317,983 | A | T | false | distal | 856 | rs35987723 | 0.000212 | 0.055406 | 72.738 | intron_variant | dELS_flank | ENSG00000123700 | 137,938 | ENSG00000267109 | 4,594 | 4,594 | ENSG00000267109 | dELS_flank | ENSG00000123700 | 148,450 | ENSG00000267109 | 50,932 | 50,932 | ENSG00000267109 | distal | NA | NA | |
17 | 71,870,574 | G | A | false | non_coding_transcript_exon_variant | 865 | rs573250010 | 0.00006 | 0.005824 | 37.935 | non_coding_transcript_exon_variant | non_coding_transcript_exon_variant | ENSG00000125398 | 250,445 | ENSG00000283517 | 0 | 0 | ENSG00000283517 | non_coding_transcript_exon_variant | ENSG00000125398 | 250,445 | ENSG00000283517 | 1,175 | 1,175 | ENSG00000283517 | non_coding_transcript_exon_variant | NA | NA | |
17 | 72,161,531 | G | A | false | distal | 921 | rs4793402 | 0.000062 | 0.094854 | 41.507 | intron_variant | CA_flank | ENSG00000125398 | 35,114 | ENSG00000288605 | 11,181 | 11,181 | ENSG00000288605 | CA_flank | ENSG00000125398 | 40,510 | ENSG00000288605 | 12,051 | 12,051 | ENSG00000288605 | distal | NA | NA | |
17 | 72,186,762 | A | G | false | distal | 924 | rs7215281 | 0.000235 | 0.4158 | 25.962 | intron_variant | intron_variant | ENSG00000125398 | 60,345 | ENSG00000234899 | 1,200 | 1,200 | ENSG00000234899 | intron_variant | ENSG00000125398 | 65,741 | ENSG00000288605 | 13,178 | 13,178 | ENSG00000288605 | distal | NA | NA | |
17 | 72,384,326 | G | A | false | non_coding_transcript_exon_variant | 865 | rs113548290 | 0.000083 | 0.018903 | 9.0086 | non_coding_transcript_exon_variant | non_coding_transcript_exon_variant | ENSG00000125398 | 257,909 | ENSG00000227036 | 0 | 0 | ENSG00000227036 | non_coding_transcript_exon_variant | ENSG00000125398 | 263,305 | ENSG00000227036 | 810 | 810 | ENSG00000227036 | non_coding_transcript_exon_variant | NA | NA | |
17 | 72,384,542 | C | T | false | non_coding_transcript_exon_variant | 865 | rs541343381 | 0.000414 | 0.001464 | 3.9625 | non_coding_transcript_exon_variant | non_coding_transcript_exon_variant | ENSG00000125398 | 258,125 | ENSG00000227036 | 0 | 0 | ENSG00000227036 | non_coding_transcript_exon_variant | ENSG00000125398 | 263,521 | ENSG00000227036 | 594 | 594 | ENSG00000227036 | non_coding_transcript_exon_variant | NA | NA | |
17 | 72,407,549 | C | G | true | non_coding_transcript_exon_variant | 865 | rs141389156 | 0.99995 | eGFR,eGFRcys,sCr | 0.004345 | 6.0563 | non_coding_transcript_exon_variant | non_coding_transcript_exon_variant | ENSG00000133195 | 238,399 | ENSG00000227036 | 0 | 0 | ENSG00000227036 | non_coding_transcript_exon_variant | ENSG00000125398 | 286,528 | ENSG00000227036 | 18 | 18 | ENSG00000227036 | non_coding_transcript_exon_variant | NA | NA |
17 | 72,419,475 | G | A | false | non_coding_transcript_exon_variant | 865 | rs149059045 | 0.000118 | 0.002883 | 5.3211 | non_coding_transcript_exon_variant | non_coding_transcript_exon_variant | ENSG00000133195 | 226,473 | ENSG00000227036 | 0 | 0 | ENSG00000227036 | non_coding_transcript_exon_variant | ENSG00000125398 | 298,454 | ENSG00000227036 | 1,748 | 1,748 | ENSG00000227036 | non_coding_transcript_exon_variant | NA | NA | |
17 | 72,420,538 | T | G | false | non_coding_transcript_exon_variant | 865 | rs551987796 | 0.000035 | 0.002895 | 5.6301 | non_coding_transcript_exon_variant | non_coding_transcript_exon_variant | ENSG00000133195 | 225,410 | ENSG00000227036 | 0 | 0 | ENSG00000227036 | non_coding_transcript_exon_variant | ENSG00000125398 | 299,517 | ENSG00000227036 | 685 | 685 | ENSG00000227036 | non_coding_transcript_exon_variant | NA | NA | |
17 | 72,422,907 | G | A | false | non_coding_transcript_exon_variant | 865 | rs185349941 | 0.000033 | 0.002801 | 4.1289 | non_coding_transcript_exon_variant | non_coding_transcript_exon_variant | ENSG00000133195 | 223,041 | ENSG00000227036 | 0 | 0 | ENSG00000227036 | non_coding_transcript_exon_variant | ENSG00000125398 | 301,886 | ENSG00000227036 | 5 | 5 | ENSG00000227036 | non_coding_transcript_exon_variant | NA | NA | |
17 | 72,422,964 | G | C | false | non_coding_transcript_exon_variant | 865 | rs370753539 | 0.000033 | 0.001641 | 4.0429 | non_coding_transcript_exon_variant | non_coding_transcript_exon_variant | ENSG00000133195 | 222,984 | ENSG00000227036 | 0 | 0 | ENSG00000227036 | non_coding_transcript_exon_variant | ENSG00000125398 | 301,943 | ENSG00000227036 | 50 | 50 | ENSG00000227036 | non_coding_transcript_exon_variant | NA | NA | |
17 | 72,427,658 | G | T | false | non_coding_transcript_exon_variant | 865 | rs185910997 | 0.000063 | 0.001515 | 7.8252 | non_coding_transcript_exon_variant | non_coding_transcript_exon_variant | ENSG00000133195 | 218,290 | ENSG00000227036 | 0 | 0 | ENSG00000227036 | non_coding_transcript_exon_variant | ENSG00000125398 | 306,637 | ENSG00000227036 | 588 | 588 | ENSG00000227036 | non_coding_transcript_exon_variant | NA | NA | |
17 | 72,687,412 | T | C | false | distal | 882 | rs12450142 | 0.001778 | 0.17256 | 22.646 | intron_variant | dELS | ENSG00000133195 | 25,326 | ENSG00000200783 | 23,259 | 23,259 | ENSG00000200783 | dELS | ENSG00000133195 | 162,293 | ENSG00000200783 | 23,259 | 23,259 | ENSG00000200783 | distal | NA | NA | |
17 | 73,167,530 | A | G | false | distal | 877 | rs714925 | 0.000089 | 0.33567 | 41.121 | intron_variant | dELS | ENSG00000180616 | 1,697 | ENSG00000180616 | 435 | 435 | ENSG00000180616 | dELS | ENSG00000180616 | 2,519 | ENSG00000180616 | 2,517 | 2,517 | ENSG00000180616 | distal | NA | NA | |
17 | 73,181,000 | T | C | false | distal | 919 | rs8073445 | 0.000081 | 0.1565 | 87.109 | intergenic_variant | CA_flank | ENSG00000180616 | 4,366 | ENSG00000264860 | 6,838 | 4,366 | ENSG00000180616 | CA_flank | ENSG00000166685 | 12,054 | ENSG00000166685 | 12,092 | 12,054 | ENSG00000166685 | distal | NA | NA | |
17 | 73,197,386 | G | C | false | missense_variant | 823 | rs117208167 | 0.000045 | 0.010717 | 9.3357 | missense_variant | missense_variant | ENSG00000166685 | 0 | ENSG00000166685 | 304 | 0 | ENSG00000166685 | missense_variant | ENSG00000166685 | 4,313 | ENSG00000166685 | 4,292 | 4,292 | ENSG00000166685 | missense_variant | NA | NA | |
17 | 73,212,971 | C | T | false | distal | 849 | rs547847348 | 0.000176 | 0.001524 | 5.185 | intron_variant | dELS_flank | ENSG00000133193 | 230 | ENSG00000133193 | 230 | 230 | ENSG00000133193 | dELS_flank | ENSG00000166685 | 6,811 | ENSG00000166685 | 6,229 | 6,229 | ENSG00000166685 | distal | NA | NA | |
17 | 73,291,890 | A | G | false | distal | 883 | rs12950128 | 0.001227 | 0.35597 | 35.683 | intron_variant | dELS | ENSG00000179604 | 5,036 | ENSG00000179604 | 5,277 | 5,036 | ENSG00000179604 | dELS | ENSG00000179604 | 5,389 | ENSG00000179604 | 18,004 | 5,389 | ENSG00000179604 | distal | NA | NA | |
17 | 73,423,896 | T | C | false | splicing | 922 | rs6501636 | 0.000047 | 0.19816 | 33.321 | intron_variant | dELS_flank | ENSG00000069188 | 19 | ENSG00000069188 | 19 | 19 | ENSG00000069188 | exon_proximal | ENSG00000069188 | 9,240 | ENSG00000069188 | 13,872 | 9,240 | ENSG00000069188 | splicing | NA | splicing:b1 | |
17 | 74,045,578 | G | A | false | distal | 856 | rs78818744 | 0.000147 | 0.042249 | 13.329 | intron_variant | dELS_flank | ENSG00000172809 | 158,003 | ENSG00000266357 | 2,068 | 2,068 | ENSG00000266357 | dELS_flank | ENSG00000172809 | 158,003 | ENSG00000266357 | 67,320 | 67,320 | ENSG00000266357 | distal | NA | NA | |
17 | 74,051,638 | T | C | false | distal | 856 | rs6501684 | 0.000025 | 0.11807 | 11.387 | intron_variant | dELS_flank | ENSG00000172809 | 151,943 | ENSG00000266357 | 8,128 | 8,128 | ENSG00000266357 | dELS_flank | ENSG00000172809 | 151,943 | ENSG00000266357 | 61,260 | 61,260 | ENSG00000266357 | distal | NA | NA | |
17 | 74,052,027 | G | C | false | distal | 856 | rs6501686 | 0.00003 | 0.10433 | 10.548 | intron_variant | dELS_flank | ENSG00000172809 | 151,554 | ENSG00000266357 | 8,517 | 8,517 | ENSG00000266357 | dELS_flank | ENSG00000172809 | 151,554 | ENSG00000266357 | 60,871 | 60,871 | ENSG00000266357 | distal | NA | NA | |
17 | 74,059,565 | G | A | false | distal | 856 | rs77796807 | 0.00086 | 0.056414 | 28.856 | intron_variant | dELS_flank | ENSG00000172809 | 144,016 | ENSG00000266357 | 2,545 | 2,545 | ENSG00000266357 | dELS_flank | ENSG00000172809 | 144,016 | ENSG00000266357 | 53,333 | 53,333 | ENSG00000266357 | distal | NA | NA | |
17 | 74,167,263 | G | A | false | distal | 920 | rs757871707 | 0.000247 | 0.001209 | 6.3079 | intergenic_variant | CA_flank | ENSG00000172809 | 36,318 | ENSG00000266357 | 13,050 | 13,050 | ENSG00000266357 | CA_flank | ENSG00000172809 | 36,318 | ENSG00000266357 | 13,050 | 13,050 | ENSG00000266357 | distal | NA | NA | |
17 | 74,178,773 | T | C | false | distal | 908 | rs12937481 | 0.000068 | 0.36362 | 19.854 | intergenic_variant | intergenic_variant | ENSG00000172809 | 24,808 | ENSG00000266357 | 24,560 | 24,560 | ENSG00000266357 | intergenic_variant | ENSG00000172809 | 24,808 | ENSG00000266357 | 24,560 | 24,560 | ENSG00000266357 | distal | NA | NA | |
17 | 74,196,678 | A | G | false | distal | 875 | rs9909291 | 0.000139 | 0.41992 | 40.302 | intergenic_variant | dELS | ENSG00000172809 | 6,903 | ENSG00000172809 | 6,983 | 6,903 | ENSG00000172809 | dELS | ENSG00000172809 | 6,903 | ENSG00000172809 | 6,983 | 6,903 | ENSG00000172809 | distal | NA | NA | |
17 | 74,253,090 | C | A | false | missense_variant | 828 | rs9899862 | 0.000264 | 0.25064 | 79.593 | missense_variant | missense_variant | ENSG00000141540 | 0 | ENSG00000141540 | 0 | 0 | ENSG00000141540 | missense_variant | ENSG00000141540 | 5,131 | ENSG00000141540 | 3,132 | 3,132 | ENSG00000141540 | missense_variant | NA | NA | |
17 | 74,281,550 | G | A | false | 5_prime_UTR_variant | 891 | rs62065702 | 0.000155 | 0.16271 | 82.86 | 5_prime_UTR_variant | 5_prime_UTR_variant | ENSG00000171595 | 0 | ENSG00000171595 | 256 | 0 | ENSG00000171595 | 5_prime_UTR_variant | ENSG00000171595 | 37 | ENSG00000171595 | 7,293 | 37 | ENSG00000171595 | 5_prime_UTR_variant | NA | NA | |
17 | 74,312,180 | G | A | false | missense_variant | 818 | rs1979370 | 0.000109 | 0.08658 | 27.197 | missense_variant | missense_variant | ENSG00000171595 | 0 | ENSG00000171595 | 104 | 0 | ENSG00000171595 | missense_variant | ENSG00000196169 | 14,029 | ENSG00000171595 | 1,663 | 1,663 | ENSG00000171595 | missense_variant | NA | NA | |
17 | 74,341,898 | T | G | false | missense_variant | 821 | rs142434865 | 0.000113 | 0.000682 | 4.4063 | missense_variant | missense_variant | ENSG00000196169 | 0 | ENSG00000196169 | 0 | 0 | ENSG00000196169 | missense_variant | ENSG00000196169 | 15,671 | ENSG00000196169 | 6,691 | 6,691 | ENSG00000196169 | missense_variant | NA | NA | |
17 | 74,428,539 | A | G | false | distal | 846 | rs9908500 | 0.000065 | 0.10383 | 87.792 | intron_variant | dELS_flank | ENSG00000170412 | 2,844 | ENSG00000200021 | 10,834 | 2,844 | ENSG00000170412 | dELS_flank | ENSG00000170412 | 2,844 | ENSG00000200021 | 10,834 | 2,844 | ENSG00000170412 | distal | NA | NA | |
17 | 74,462,964 | C | T | false | distal | 878 | rs2706532 | 0.00095 | 0.43424 | 76.884 | intergenic_variant | dELS | ENSG00000167851 | 3,434 | ENSG00000167851 | 3,711 | 3,434 | ENSG00000167851 | dELS | ENSG00000167851 | 3,434 | ENSG00000167851 | 3,711 | 3,434 | ENSG00000167851 | distal | NA | NA | |
17 | 74,514,468 | A | G | false | distal | 874 | rs111064308 | 0.000176 | 0.12331 | 95.79 | intergenic_variant | dELS | ENSG00000178789 | 6,705 | ENSG00000289070 | 17,937 | 6,705 | ENSG00000178789 | dELS | ENSG00000178789 | 17,005 | ENSG00000289070 | 17,937 | 17,005 | ENSG00000178789 | distal | NA | NA | |
17 | 74,514,533 | T | G | false | distal | 874 | rs79633517 | 0.000168 | 0.1247 | 94.712 | intergenic_variant | dELS | ENSG00000178789 | 6,640 | ENSG00000289070 | 17,872 | 6,640 | ENSG00000178789 | dELS | ENSG00000178789 | 16,940 | ENSG00000289070 | 17,872 | 16,940 | ENSG00000178789 | distal | NA | NA | |
17 | 74,559,068 | T | C | false | distal | 884 | rs1171213 | 0.000039 | 0.37457 | 101.29 | intergenic_variant | dELS | ENSG00000167850 | 12,952 | ENSG00000284690 | 1,632 | 1,632 | ENSG00000284690 | dELS | ENSG00000167850 | 12,952 | ENSG00000236770 | 6,330 | 6,330 | ENSG00000236770 | distal | NA | NA | |
17 | 74,569,021 | G | A | false | distal | 840 | rs533304002 | 0.000119 | 0.015386 | 15.751 | intergenic_variant | pELS | ENSG00000204345 | 10,343 | ENSG00000284690 | 1,677 | 1,677 | ENSG00000284690 | pELS | ENSG00000167850 | 22,905 | ENSG00000284690 | 1,677 | 1,677 | ENSG00000284690 | distal | NA | NA | |
17 | 74,588,625 | C | T | false | missense_variant | 816 | rs783239 | 0.00012 | 0.21105 | 111.33 | missense_variant | missense_variant | ENSG00000204345 | 0 | ENSG00000182352 | 1,876 | 0 | ENSG00000204345 | missense_variant | ENSG00000204345 | 3,657 | ENSG00000182352 | 1,876 | 1,876 | ENSG00000182352 | missense_variant | NA | NA | |
17 | 74,749,174 | C | G | false | missense_variant | 835 | rs35910969 | 0.001244 | 0.032515 | 12.413 | missense_variant | missense_variant | ENSG00000109062 | 0 | ENSG00000266036 | 261 | 0 | ENSG00000109062 | missense_variant | ENSG00000109062 | 521 | ENSG00000266036 | 261 | 261 | ENSG00000266036 | missense_variant | NA | NA | |
17 | 74,763,436 | G | A | false | missense_variant | 814 | rs119486097 | 0.00705 | 0.00255 | 6.7023 | missense_variant | missense_variant | ENSG00000109062 | 0 | ENSG00000109062 | 0 | 0 | ENSG00000109062 | missense_variant | ENSG00000109062 | 1,432 | ENSG00000109062 | 7 | 7 | ENSG00000109062 | missense_variant | NA | NA | |
17 | 74,775,154 | C | T | false | tss_proximal | 904 | rs11655219 | 0.001419 | 0.46633 | 72.077 | intron_variant | PLS_flank | ENSG00000109065 | 467 | ENSG00000109065 | 205 | 205 | ENSG00000109065 | tss_proximal | ENSG00000109065 | 552 | ENSG00000109065 | 1,149 | 552 | ENSG00000109065 | tss_proximal | tss_prox:b1 | tss_prox:b1 | |
17 | 74,779,219 | G | A | false | distal | 870 | rs6501736 | 0.001529 | 0.34294 | 87.645 | intron_variant | dELS | ENSG00000109066 | 1,480 | ENSG00000109066 | 1,843 | 1,480 | ENSG00000109066 | dELS | ENSG00000109066 | 2,698 | ENSG00000109066 | 2,709 | 2,698 | ENSG00000109066 | distal | NA | NA | |
17 | 74,842,510 | C | A | false | missense_variant | 826 | rs3744215 | 0.000212 | 0.27485 | 135.5 | missense_variant | missense_variant | ENSG00000161509 | 0 | ENSG00000161509 | 853 | 0 | ENSG00000161509 | missense_variant | ENSG00000161509 | 17,374 | ENSG00000109066 | 5,410 | 5,410 | ENSG00000109066 | missense_variant | NA | NA | |
17 | 74,866,908 | C | T | false | missense_variant | 816 | rs1688149 | 0.001331 | 0.2055 | 113.18 | missense_variant | missense_variant | ENSG00000161513 | 0 | ENSG00000161513 | 9 | 0 | ENSG00000161513 | missense_variant | ENSG00000161513 | 1,722 | ENSG00000161513 | 1,564 | 1,564 | ENSG00000161513 | missense_variant | NA | NA | |
17 | 74,872,953 | G | A | false | 5_prime_UTR_variant | 888 | rs492095 | 0.001141 | 0.26299 | 77.09 | 5_prime_UTR_variant | 5_prime_UTR_variant | ENSG00000161513 | 0 | ENSG00000161513 | 0 | 0 | ENSG00000161513 | 5_prime_UTR_variant | ENSG00000161513 | 7 | ENSG00000161513 | 10 | 7 | ENSG00000161513 | 5_prime_UTR_variant | NA | NA | |
17 | 74,917,393 | G | C | false | 3_prime_UTR_variant | 912 | rs55744500 | 0.000051 | 0.009296 | 41.957 | 3_prime_UTR_variant | 3_prime_UTR_variant | ENSG00000182040 | 0 | ENSG00000182040 | 522 | 0 | ENSG00000182040 | 3_prime_UTR_variant | ENSG00000183034 | 5,556 | ENSG00000182040 | 5,862 | 5,556 | ENSG00000183034 | 3_prime_UTR_variant | NA | NA | |
17 | 74,942,005 | T | C | false | missense_variant | 815 | rs1542752 | 0.003765 | 0.1493 | 47.284 | missense_variant | missense_variant | ENSG00000182938 | 0 | ENSG00000167861 | 8,737 | 0 | ENSG00000182938 | missense_variant | ENSG00000182938 | 6,106 | ENSG00000167861 | 12,966 | 6,106 | ENSG00000182938 | missense_variant | NA | NA | |
17 | 74,991,069 | G | A | false | distal | 857 | rs113463239 | 0.000035 | 0.00183 | 6.748 | intron_variant | dELS_flank | ENSG00000109089 | 2,946 | ENSG00000263586 | 15,340 | 2,946 | ENSG00000109089 | dELS_flank | ENSG00000109089 | 3,436 | ENSG00000167861 | 17,902 | 3,436 | ENSG00000109089 | distal | NA | NA | |
17 | 74,991,641 | C | T | true | distal | 857 | 17:72987736:C:T | 0.964675 | WBC | 0.001673 | 15.447 | intron_variant | dELS_flank | ENSG00000109089 | 3,518 | ENSG00000263586 | 15,912 | 3,518 | ENSG00000109089 | dELS_flank | ENSG00000109089 | 4,008 | ENSG00000167861 | 18,474 | 4,008 | ENSG00000109089 | distal | NA | NA |
17 | 75,012,709 | G | T | false | missense_variant | 835 | rs3744206 | 0.000301 | 0.031574 | 77.525 | missense_variant | missense_variant | ENSG00000167862 | 0 | ENSG00000167862 | 27 | 0 | ENSG00000167862 | missense_variant | ENSG00000167862 | 38 | ENSG00000167862 | 27 | 27 | ENSG00000167862 | missense_variant | NA | NA | |
17 | 75,046,239 | C | T | false | tss_proximal | 900 | rs71380859 | 0.000271 | 0.044558 | 88.297 | intron_variant | pELS_flank | ENSG00000167863 | 685 | ENSG00000167863 | 685 | 685 | ENSG00000167863 | tss_proximal | ENSG00000167863 | 729 | ENSG00000167863 | 710 | 710 | ENSG00000167863 | tss_proximal | tss_prox:b1 | tss_prox:b1 | |
17 | 75,129,871 | G | A | false | 3_prime_UTR_variant | 916 | rs111988834 | 0.000028 | 0.037474 | 48.478 | 3_prime_UTR_variant | 3_prime_UTR_variant | ENSG00000125449 | 0 | ENSG00000125458 | 356 | 0 | ENSG00000125449 | 3_prime_UTR_variant | ENSG00000125458 | 1,386 | ENSG00000279035 | 1,011 | 1,011 | ENSG00000279035 | 3_prime_UTR_variant | NA | NA | |
17 | 75,131,253 | G | A | false | missense_variant | 835 | rs11541956 | 0.000097 | 0.031054 | 40.666 | missense_variant | missense_variant | ENSG00000125458 | 0 | ENSG00000279035 | 0 | 0 | ENSG00000125458 | missense_variant | ENSG00000125458 | 4 | ENSG00000125458 | 171 | 4 | ENSG00000125458 | missense_variant | NA | NA | |
17 | 75,154,015 | A | T | false | 5_prime_UTR_variant | 886 | rs539205963 | 0.000048 | 0.005082 | 29.613 | 5_prime_UTR_variant | 5_prime_UTR_variant | ENSG00000189159 | 0 | ENSG00000189159 | 326 | 0 | ENSG00000189159 | 5_prime_UTR_variant | ENSG00000189159 | 148 | ENSG00000189159 | 496 | 148 | ENSG00000189159 | 5_prime_UTR_variant | NA | NA | |
17 | 75,231,517 | G | A | true | tss_proximal | 932 | rs199959682 | 1 | BW | 0.002008 | 11.751 | intron_variant | dELS | ENSG00000125450 | 55 | ENSG00000125450 | 55 | 55 | ENSG00000125450 | tss_proximal | ENSG00000125450 | 1,607 | ENSG00000125450 | 378 | 378 | ENSG00000125450 | tss_proximal | tss_prox:b2 | tss_prox:b0 |
17 | 75,232,049 | T | C | false | 3_prime_UTR_variant | 910 | rs2291030 | 0.005961 | 0.16888 | 278.37 | 3_prime_UTR_variant | 3_prime_UTR_variant | ENSG00000125450 | 69 | ENSG00000125450 | 0 | 0 | ENSG00000125450 | 3_prime_UTR_variant | ENSG00000125450 | 1,075 | ENSG00000125450 | 870 | 870 | ENSG00000125450 | 3_prime_UTR_variant | NA | NA | |
17 | 75,232,078 | C | T | false | 3_prime_UTR_variant | 910 | rs2291031 | 0.006746 | 0.169 | 278.33 | 3_prime_UTR_variant | 3_prime_UTR_variant | ENSG00000125450 | 98 | ENSG00000125450 | 0 | 0 | ENSG00000125450 | 3_prime_UTR_variant | ENSG00000125450 | 1,046 | ENSG00000125450 | 841 | 841 | ENSG00000125450 | 3_prime_UTR_variant | NA | NA |
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