id stringlengths 12 30 | sequence stringlengths 12 4.38k | secondary_structure stringlengths 12 4.38k | aligned_ids listlengths 1 10 | aligned_sequences listlengths 1 10 | split stringclasses 4
values |
|---|---|---|---|---|---|
CP002956.1_3069894-3070175 | UUAGAGGCUUGUCGUUGUGAAAGUCAGAAUAUUAAAGCCAGUGCGAGAAGUUAUCAUCGAAAUAGACGUGUUCAUCAAAAUAUAAGCAAGCAUGCGGUACCAGGUCAACCUGGGGGUGUUUGUCAGUGUUGAGUCGCAGUUGGUCAUUAUUGAGUAGUCGUGGUCAGCAUGAGUAUGGAAGAGGGAGUGACAUCAAGGAGAGCGAUUGUCAGACGUUCAUUUCUGUACGACAAACAUUUCCGUAGGGCAAAUAAAUAUCCUCCGGCAUAGCCGGAGGUUUUU | .....(((((.((.....)))))))...........(((..((((.(((((.....(((..(((((.(((..(.((..(((((..((((((((.((((.........)))..)..))))))))..))))).....(((((((.((.((.(((((((.(((((.....))))).)))................)))).)))).)))))))..)).)..))).))))).))).....))))))))).)))..(.(((...((((((((...))))))))))).) | [
"CP002956.1/3069894-3070175",
"CP000950.1/2059374-2059651"
] | [
"UUAGAGGCUUGUCGUUGUGAAAGUCAGAAUAUUAAAGCCAGUGCGAGAAGUUAUCAUCGAAAUAGACGUGUUCAUCAAAAUAUAAGCAAGCAUGCGGUACCAGGUCAACCUGGGGGUGUUUGUCAGUGUUGAGUCGCAGUUGGUCAUUAUUGAGUAGUCGUGGUCAGCAUGAGUAUGGAAGAGGGAGUGACAUCAAGGAGAGCGAUUGUCAGACGUUCAUUUCUGUACGACAAACAUUUCCGUAGGGCAAAUAAAUAUCCUCCGGCAUAGCCGGAGGUUUUU--",
"UUAGAGGCUUGUCGUUGUGAAAGUC... | rfam_14_5_mafft |
CP002956.1_631353-631148 | GAAAUAUAAAAAACCCGACUGUUUUCCGGGUUUUUGUCAGGUAGUUGAUCACCUCAGAUGAAGGUGAAACGUGCCGUUGGGGGCGUCAUGACAUGAGCCACUGAAGCACGAGUAGGGGAAGUAGACCCUUCAUUCACUGGCCUAUACACGGGGGUUAUUUACCUCAAAAGCCCCGGAGCUGGGCUGGACUGCUCCGGGGCUUUUUC | ........(((((((((.........)))))))))(((((.....((((((((((....).))))))..(((((..((.(((((.((((...))))))).)).)))))))...((((........)))))))....))))).........(((((.....)))))((((((((((((((.((......)))))))))))))))).. | [
"CP002956.1/631353-631148",
"CP000950.1/3988217-3988012",
"CP000720.1/3933031-3932835"
] | [
"GAAAUAUAAAAAACCCGACUGUUUUCCGGGUUUUUGUCAGGUAGUUGAUCACCUCAGAUGAAGGUGAAACGUGCCGUUGGGGGCGUCAUGACAUGAGCCACUGAAGCACGAGUAGGGGAAGUAGACCCUUCAUUCACUGGCCUAU-ACACGGGGGUUAUUUACCUCAAAAGCCCCGGAGCUGGGCUGGACUGCUCCGGGGCUUUUUC",
"GAAAUAUAAAAAACCCGACUGUUUUCCGGGUUUUUGUCAGGUAGUUGAUCACCUCAGAUAAAGGUGAAACGUGCCGUUGGGGGCGUCAUGACAUGAGCCACU... | rfam_14_5_mafft |
CP002958.1_5369-5292 | GCAAAAGUCAGGACUAGACAUAUUAACCAUCGAUUCAGUCCUUAUCAUACGCCCUCACAGAACACCUCCUGUGAGGGC | .........((((((.((................))))))))........((((((((((........)))))))))) | [
"CP002958.1/5369-5292",
"L19030.2/2113-2188",
"ADAX01000181.1/3191-3268"
] | [
"GCAAAAGUCAGGACUAGACAUAUUAACCAUCGAUUCAGUCCUUAUCAUACGCCCUCACAGAACACCUCCUGUGAGGGC",
"CAAAAAGUCAGGACUAGACAUAUUAACCAUCGAUUCAGUCCUUAUCAUA--GCCUCACAGAACACCUCCUGUGAGGGU",
"GCAAAAGUCAGGACUAGACAUACUAUCCAUCGAUUCAGUCCUUACCUUACGCCCUCACUGAUUUCCUGCCGUGAGGGC"
] | rfam_14_5_mafft |
CP003047.1_2734331-2734193 | CAAGACGAUCCGGUACGGGUAACUUUCUUUUCGCAUAAUUCAGGUCAUUCACCUUGAAUAAUUGAGGGAUGACCUCAUUUAAUCUCCAGUAGCAAUUUUGACCUGUUAUGGGAGGAGUUAUGCGUCUGGAUCGUCUUAC | .(((((((((((..(((.(.(((((...((......))...))........((((((....))))))((((....))))...(((((.(((...............))).))))).))).).))).))))))))))).. | [
"CP003047.1/2734331-2734193",
"CP000783.1/626636-626774",
"FN554766.1/2990195-2990057"
] | [
"CAAGACGAUCCGGUACGGGUAACUUUCUUUUCGCAUAAUUCAGGUCAUUCACCUUGAAUAAUUGAGGGAUGACCUCAUUUAAUCUCCAGUAGCAAUUUUGACCUGUUAUGGGAGGAGUUAUGCGUCUGGAUCGUCUUAC",
"CAAGACGAUCCGGUACGGAUAACUGACGCUCUACAUAAUUAAGGUCAUUAACCUUGAAUAAUUGAGGGAUGACCUCAUUUAAUCUCCAGUAGCAAUUUUGACCUGUUAUGGGAGGAGUUAUGCGUCUGGAUCGUCUUAC",
"CAAGACGAUCCGGUACGCGUGAUUU... | rfam_14_5_mafft |
CP003316.1_1347629-1347568 | AACACCCUGGGCAACACCCCUGUAGGGGGGGCGAAUGAGCCUGGUGGGUUACCCCGGCCAUA | ...(((..((((....(((((.....))))).......)))))))................. | [
"CP003316.1/1347629-1347568",
"AE009441.1/1001407-1001347",
"CP001014.1/643411-643351",
"CP000561.1/585996-585937",
"CP000660.1/700317-700377"
] | [
"AACACCCUGGGCAACACCCCUGUAGGGGGGGCGAAUGAGCCUGGUGGGUUACCCCGGCCAUA",
"UUAGCCCUAGGUAACACCCCUGAG-CGGGGGCGGAUGAGCCUGGCGGGUUACCCCGGCCAAA",
"ACUGCCCUAGGCAACACCCCUGUA-GGGGGGCGUAUGAGCCUGGCGGGUUACCCCGGCCAUA",
"AAUGCCCUAGGCAACACCCCCGA--GUGGGGCGAAUGAGCCUGGCGGGUUACCCCGGCCAAA",
"AACACCCUGGGCAACACCCCUGUA-GGGGGGCGAAUGAGCCUG... | rfam_14_5_mafft |
CP003316.1_1875733-1875794 | UGGGCCGGACAGCCGUGGAUCUGCGGCAGGAAUGAUAGGCCCGCCCGCGGCCGAGCUCUACA | (((((((....(((((......)))))........).))))))................... | [
"CP003316.1/1875733-1875794",
"AE009441.1/724028-724085",
"CP001014.1/224637-224694",
"CP000504.1/1173049-1172992",
"CP000660.1/262539-262478"
] | [
"UGGGCCGGACAGCCGUGGAUCUGCGGCAGGAAUGAUAGGCCCGCCCGCGGCCGAGCUCUACA",
"CGGGCUGGACUGCCGUG--GUCGCGGCU-GAAUGAAAAGCCCGCCCGCGGCCGAG-UCUACA",
"CGGGCUCGACCGCCGCG--UCUGCGGCA-GUAUGACAGGCCCGCCCGCGGCCGAG-UCUACA",
"UGGGCUUGACAGCCGCG--UCUGCGGUU-GUAUGACAAGCCCGCCCGCGGCCGAG-UGUACA",
"UGGGCCGGACAGCCGUGGAUCUGCGGUAGGAAUGAUAGGCCCG... | rfam_14_5_mafft |
CP003583.1_1877315-1877383 | UAAAGCACCCGCUUCCUUUCUGAUUGGGUUUAGUCACUUUAAUCUUACAGGGAUGAAUGCUUUUUGUGU | .((((((..((.(((((....((((((((......)).))))))....)))))))..))))))...... | [
"CP003583.1/1877315-1877383",
"AE016830.1/561100-561032"
] | [
"UAAAGCACCCGCUUCCUUUCUGAUUGGGUUUAGUCACUUUAAUCUUACAGGGAUGAAUGCUUUUUGUGU",
"UAAAGCACUCGCUUCCUUUCUGAUUGGGUUUCGUCACUUUAAUCUUACAGGAAUGAGUGCUUUUUGUGU"
] | rfam_14_5_mafft |
CP003583.1_2651143-2651337 | UUAGCUACUUUAGAUAGGUUUGUAUUCAUCAUGAUGGAUACAAACGUUAAACGACAGUUUGUAUCUAUGAUGGCUAAAGAACUUUGUAUUGCAGCAAAAAGCCACGUAGACAAAAUGCUAAGUGGCUGAGCAGUGAAAAUACAAAGUAAAAGUAUCAAGCAUUCUACUUUUUCAAUUUAUUUUCCGACUUUUCAA | (((((((...((((((.((((((((((((....))))))))))))..(((((....)))))))))))...)))))))...((((((((((....(....((((((.(((........))).)))))).....)....))))))))))(((((((..........)))))))........................ | [
"CP003583.1/2651143-2651337",
"CP003504.1/990085-989901"
] | [
"UUAGCUACUUUAGAUAGGUUUGUAUUCAU-CAUGAUGGAUACAAACGUUAAACGAC-AGUUUGUAUCUAUGAUGGCUAAAGAACUUUGUAUUGCAGCAAAAAGCCACGUAGACAAAAUGCUAAGUGGCUGAGCAGUGAAAAUACAAAGUAAAAGUAUCAAGCAUUCUACUUUUUCAAUUUAUUUUCCGACUUUUCAA-",
"UUAGCUACUUUAGAUAGGUUUGUAUUCAUGAAUUAUGGAUACAAACACCAAACAACUGGUUUGUAUCUAUGAUGGCUAAAGAACUUUGUAUUACG--CAAAAGCCACGUAG... | rfam_14_5_mafft |
CP006259.1_6123361-6123230 | AGAUGAGAGAUACACCCCGCCCACAGGGGACUGUGGGCGAUUUCAGGCCGGGGCCUCCCCAGCUUCGACCUGGUCGUGCCCUCGCGCACACAGCCGGGGCCUGAGGGCUCCGGGAUCUCCUCACCGAUCGGA | ...((((.((.......(((((((((....)))))))))...(((((.((((((.......)))))).)))))..((((......))))....((((((((....))))))))....))))))((....)). | [
"CP006259.1/6123361-6123230",
"AL645882.2/6176413-6176284",
"CP013743.1/3169964-3170093",
"CP003275.1/7698727-7698596",
"HE971709.1/3139398-3139527"
] | [
"AGAUGAGAGAUACACCCCGCCCACAGGGGACUGUGGGC-GA-UUUCAGGCCGGGGCCUCCCCAGCUUCGACCUGGUCGUGCCCUCGCGCACACAGCCGGGGCCUGAGGGCUCCGGGAUCUCCUCACCGAUCGGA",
"AGAUGAGAGAUACA-UCCGCCCACAGGGGACUGUGGGCGGAUCAUCAGGACGAGGCUUCCCCGGCUUCGACCUGGUCGUG-CCUCGCGCACACAACCGGAGCCCACGGGCUCCGG--CUUCCUCACCGAUCGGA",
"AGAUGAGAGAUACACCCCGCCCACAGGGGACUGUG... | rfam_14_5_mafft |
CP007447.1_460729-460565 | GUCAAUUUGAUAGCGGGAACAAAUAAUUAGAUGUCCUUUUUUAGGAGGGCUUAGUUUUUUGUACCCAGUUUAAGAAUACCUUUAUCAUGUGAUUCUAAAGUAUCCAGAGAAUAUCUGUAUGCUUUGUAUACCUAUGGUUAUGCAUAAAAAUCCCAGUGAUAAAAG | ....((((...((((((.(((((.((((((..(((((((....))))))))))))).))))).))).)))...))))...((((((((..((((..(((((((.((((.....)))).)))))))(((((((...)).))))).....))))...)))))))).. | [
"CP007447.1/460729-460565",
"CP003584.1/36043-36207",
"CP001850.2/550177-550341"
] | [
"GUCAAUUUGAUAGCGGGAACAAAUAAUUAGAUGUCCUUUUUUAGGAGGGCUUAGUUUUUUGUACCCAGUUUAAGAAUACCUUUAUCAUGUGAUUCUAAAGUAUCCAGAGAAUAUCUGUAUGCUUUGUAUACCUAUGGUUAUGCAUAAAAAUCCCAGUGAUAAAAG",
"GUCAAUUUGAUAGCAGGAACAAAUAAUUAGAUGUCCUUUUUUAGGAGGGCUUAGUUUUUUGUACCCAGUUUAAGAAUACCUUUAUCAUGUGAUUCUAAAGUAUCCAGAGAAUAUCUGUAUGCUUUGUAUACCUAUGGUUAUGCA... | rfam_14_5_mafft |
CP007448.1_474542-474663 | UUUUCAUCCCUGUCAGAGGUAAAAAUAGCUGUAUAAACGGCACGUUCACUUAAGUGAACAUCACUCUGACAGAAUACCCUGCUGUACCCCUACGAGUGUCUCAAAGAAAGCGGUGUAACCAG | .........(((((((((.........(((((....)))))..((((((....))))))....))))))))).........(((......((((....(......)....)).))....))) | [
"CP007448.1/474542-474663",
"AL590842.1/324999-325118",
"ACCA01000024.1/23369-23249"
] | [
"UUUUCAUCCCUGUCAGAGGUAAAAAUAGCUGUAUAAACGGCACGUUCACUUAAGUGAACAUCACUCUGACAGAAUACCCUGCUGUACCCCUACGAGUGUCUCAAAGAAAGCGGUGUAACCAG",
"UAUUCAUCCCUGUUAGAGAUAAAAAUAGCCGUAUAAACGGCACGUUCAUUUACGUGAACAUAGCUCUGACAGAAU-CCCUGCUGUACCCCUACAUAUGCAUCAAAGAAAGUGUAAUGACAG-",
"UUUUCAUCCCUGUCAGAGGCAAAAAUAGCUGUAUAAACGGCACGUUCAUCUAAGUGAAC... | rfam_14_5_mafft |
CP007653.1_2399565-2399668 | ACGGCGACAACGCUCUUUCGUGAGCGUUAAACAGAUGAGUCCGCGACCAUGGGUUGCCAUAAAAUUGAUCGCUGCUGGCGUAAUGUGCUCAGCCGCCAUGAUCA | ..(((((((((((((......)))))))......(((.(((...))))))..)))))).......(((((((.(((((((.....))).)))).))...))))) | [
"CP007653.1/2399565-2399668",
"CP002377.1/1108136-1108036"
] | [
"ACGGCGACAACGCUCUUUCGUGAGCGUUAAACAGAUGAGUCCGCGACCAUGGGUUGCCAUAAAAUUGAUCGCUGCUGGCGUAAUGUGCUCAGCCGCCAUGAUCA",
"---AUGGCAACGCGCUUUGGUCAUGGUGAGACAAAUCAAACCACGACCAUGAGUCGCCAUAAAGUUAAUCGCUGCCGGCGUAAUAUGCUCGGCCGCCAUGAUCA"
] | rfam_14_5_mafft |
CP007654.1_1010014-1010167 | CAGAGCAUGAGUUGCAUGACUGAUGCUUGGUAUCAAUAUGAUACCUCUGUGUGUUCAGCAGACCCUCGCUGGAUUCAUGGAACCUCUUCUACACGUCGACAAGAUAUGUUUCUUGUAUUUAUGCCAGCCCGUCUUCAGGCUGGCUUUUUUUCAU | ....((((.(((......))).))))..((((((.....)))))).......(((((((........)))))))........................((((((......))))))......(((((((........))))))).......... | [
"CP007654.1/1010014-1010167",
"CP002378.1/1008207-1008360"
] | [
"CAGAGCAUGAGUUGCAUGACUGAUGCUUGGUAUCAAUAUGAUACCUCUGUGUGUUCAGCAGACCCUCGCUGGAUUCAUGGAACCUCUUCUACACGUCGACAAGAUAUGUUUCUUGUAUUUA-UGCCAGCCCGUCUUCAGGCUGGCUUUUUUUCAU",
"CCAAGCGUUAGGU-CAGACCUACCGCCCGAUAUCUUAUUGAUAUCUCUGUGUUUUCAGCAGACCCUCGCUGAAAUCAUGGAACCUCUUCUACACGUCGACAAGAUAUGUUUCUUGUAUUUGUUGCCAGCCCGUCUUCAGGCUGGCUUUUUUUUC... | rfam_14_5_mafft |
CP007726.1_513630-513721 | CCGUUAAGUGGCUUGCAAUAGCGGCUUAACAGUUUCUCCUCUAUUUCUCCUUUGUAGACUUGGCACACAUUUGAAAAAAUGUGUGCAUUUUU | ..(((((((.(..........).))))))).........(((((.........)))))....((((((((((....))))))))))...... | [
"CP007726.1/513630-513721",
"CP007446.1/2013217-2013129",
"AE004969.1/1248941-1249031",
"AE002098.2/1717580-1717670"
] | [
"CCGUUAAGU-GGCUUGCAAUAGCGGCUUAACAGUUUCUCCUCUAUUUCUCCUUUGUAGACUUGGCACACAUUUGAAAAAAUGUGUGCAUUUUU",
"UCGUUAAAUCAGCUCCUAGU--UGGUUUAACAGUUUCUCCUCUAUUUCUCCUUUGUAGACUUGGCGCACACUUAAUCG--UGUGCGCAUUUUU",
"CCGUUAGCU-GGUUCG-AGUAGUCAGUUAAUAGUUUCUCCUCUAUUUCUCCUUUGUAGACUUGGCACACAUUCUAUUGAAUGUGUGCAUUUUU",
"CCGUUAGCU-GGUUCG-A... | rfam_14_5_mafft |
CP010519.1_4753949-4754060 | GCGUGGGUCGGCCCGCUGCACUGGGUCCAGCGGGCUGGGGGAACACCCGCCGUCCCCAUCCCCGCGGGCGGCGGACCGGUCCGGGAGGCGCAGCGGUGCCUCCCGGACUGCG | ((...(((((((((((((.........))))))))))(.....).(.((((((((.(......).))))))))))))(((((((((((((......))))))))))))))). | [
"CP010519.1/4753949-4754060",
"AL645882.2/4515318-4515426",
"CP006259.1/4194142-4194034",
"HE971709.1/5275677-5275785",
"CP002994.1/359325-359433",
"CP007699.2/4768104-4768212"
] | [
"GCGUGGGUCGGCCCGCUGCACUGGGUCCAGCGGGCUGGGGGAACACCCGCCGUCCCCAUCCCCGCGGGCGGCGGACCGGUCCGGGAGGCGCAGCGGUGCCUCCCGGACUGCG",
"GCGUGGGUCGGCCCGCUGUACUGGAUCCAGUGGGCUGGGGGA--CGCCGCCGCCUACAUCCCCGCGGGCGGCGGACCGGUCCGGGGGGCG-AGUCCCGUCCCCCGGACUGCG",
"GCGUGGGUCGGCCCGCUGUACUGGAUCCAGCGGGCUGGGGGA--CACCGCCACCUACAUCCCCGCGGGUGGCGGACCGG... | rfam_14_5_mafft |
CP010849.1_6249277-6249361 | ACGCCGUCCUGAACGGCGUUCACGGCCUUGACCGGGCCCGUGAGGCGGGGGUGGUGCCGUGUCGGCGCAGCACCACCCCCGCAGC | (((((((.....)))))))(((((((((.....))).)))))).(((((((((((((.(((....))).)))))))))))))... | [
"CP010849.1/6249277-6249361",
"HE971709.1/2496500-2496421",
"CP013743.1/2667557-2667473",
"AL645882.2/6706584-6706667"
] | [
"ACGCCGUCCUGAACGGCGUUCACGGCCUUGACCGGGCCCGUGAGGCGGGGGUGGUGCCGUGUCGGCGCAGCACCACCCCCGCAGC",
"ACGCCGUCCCGAGCGGCGUUCGUGGCCUCGAACGGGCCUGCGA---GGGGGUGGUGCCGUGUCGGCGCAGCACCACCCCCUCC--",
"ACGCCGUCCCGAGCGGCGUUCGCGGCCUCGACCGGGCCAGUGCGGCGGGGGUGGUGCCGUGUCGGCGCAGCACCACCCCCGCCUU",
"ACGCCGUCCCGAGCGGCGUACGCGGCCU-GAACGGGCCCGUG... | rfam_14_5_mafft |
CP012487.1_4279237-4279145 | UGGCUGCGAAAAGAGUUUUAAUUUUUUUCAGAGACCGCCGAAAAUUAACGGUCUCAGGCGACAGGCACAAGACGGAGAGAAACUAUGUUUGAA | ((.(((((....(((.(((((((...................)))))..)).)))...)).))).)).....((((.(.......).)))).. | [
"CP012487.1/4279237-4279145",
"CP000036.1/93227-93316",
"U00096.3/105224-105313",
"CP000822.1/3049179-3049089",
"CP009458.1/1888976-1889068",
"CP007215.3/4036364-4036274"
] | [
"UGGCUGCGAAAAGAGUUUUAAUUUUUUUCAGAGACCGCCGAAAAUUAACGGUCUCAGGCGACAGGCACAAGACGGAGAGAAACUAUGUUUGAA",
"UGGCUGCGAAAAGAGUUUUAAUUUUUAU--GAGGCCGACGAUGAUUA-CGGACUCAGGCGACAGGCACAAAUCGGAGAGAAACUAUGUUUGAA",
"UGGCUGCGAAAAGAGUUUUAAUUUUUAU--GAGGCCGACGAUGAUUA-CGGCCUCAGGCGACAGGCACAAAUCGGAGAGAAACUAUGUUUGAA",
"UGGCUGCGAAAAGAGUUU... | rfam_14_5_mafft |
CP013026.1_10478-10554 | CGGCACGCUGUCCCGACGUUAACAUCUCCAUGAGUUCGCCGGGUACCCUCUCCAUCAGCGGCGUGACCGCCUCCUUA | (((((((((((((((.((..(((.((.....))))))).))))..............)))))))).)))........ | [
"CP013026.1/10478-10554",
"CP000037.1/105859-105783",
"AE006471.2/90198-90122"
] | [
"CGGCACGCUGUCCCGACGUUAACAUCUCCAUGAGUUCGCCGGGUACCCUCUCCAUCAGCGGCGUGACCGCCUCCUUA",
"CGGCGCGCUGUCCUGAUGUCAGUUUCUCCAUGAGUUCGCCAGGUACUCUCUCCAUCAGCGGCGUGACCGCCUCCUUA",
"CGGCACGCUGUCCGGAUGUCAGAGUCUCCAUGAGUUCGCCGGGUACCCUCUCCAUCAGUGGCGUGACCGCCUCCUUG"
] | rfam_14_5_mafft |
CP013026.1_6329-6513 | CCGACCGGAUAUUAAAAAAAGCAAAUCUCAUGCAUUAUUCAGCCUUCUGAAUCCCUGGAGUAAUGAAGGCUGCUUUUUUCGUUACACCCUUCCCCGGCUGCGCCGGUGGCAGUGUUCAGCCCUUUUUCGGGCAAACUGCUGCCAGUCUGUCCGGGGCGCAACACCGGCAGCCCGUCGCCAUGCUU | ....((((............(((.......)))...((((((....))))))..)))).((((((((((......))))))))))......(((((((.(.((.(((((((((.....((((......))))..))))))))).))).).)))))).(((.(..((......))..)...))).. | [
"CP013026.1/6329-6513",
"CP000035.1/103155-102972",
"AJJI01000026.1/9634-9817",
"JMJC01000011.1/108533-108716"
] | [
"CCGACCGGAUAUUAAAAAAAGCAAAUCUCAUGCAUU--AUUCAGCCUUCUGAAUCCCUGGAGUAAUGAAGGCUGCUUUUUUCGUUACACCCUUCCCCGGCUGCGCCGGUGGCAGUGUUCAGCCCUUUUUCGGGCAAACUGCUGCCAGUCUGUCCGGGGCGCAACACCGGCAGCCCGUCGCCAUGCUU",
"CCGACCGGAUAUU--AAGAAGCAAAUCUCAUAAACUCCUUUCAGCCUUCUG-ACUCCUGGAGUAAUGAAGGCUGCUUUUUUCGUUACACCCUUCCCCGGCAGCGCCGGUGGCAGUGUUCAGC... | rfam_14_5_mafft |
CP013476.1_843083-842853 | ACAGCCUCAAUGCGUUUAAGAUAAGCUGGCAAUAAAAAAAGCAGAAUCUUAUCCCCGAUGAUAGGCUUUUUUGUUGUGCUUAUUUAUACGAUAUUGAGCAUUCAUUAGUUACGGUGAGAUAUAAGUUAUUUAACUAUACCUUUAUUUAACUAUGUCUUUAAUAUGAAUGUUUCCAAAUUGUAUGUAUGCAGACCAAAAGCCACAUUGUGGAUUUAGGCCUGCAUUUUUUAU | .....((((((((((...((((((((..(((((((((((.((.....(.((((......))))))))))))))))))))))))))..))).)))))))(((((((..((((....((((((((.((((..(((........)))..)))))))))))))))))))))))................((((((.((.(((.((((...)))).))).)).))))))....... | [
"CP013476.1/843083-842853",
"CP013688.1/1351708-1351479",
"AGOL01000005.1/190690-190460"
] | [
"ACAGCCUCAAUGCGUUUAAGAUAAGCUGGCAAUAAAAAAAGCAGAAUCUUAUCCCCGAUGAUAGGCUUUUUUGUUGUGCUUAUUUAUACGAUAUUGAGCAUUCAUUAGUUACGGUGA-GAUAUAAGUUAUUUAACUAUACCUUUAUUUAACUAUGUCUUUAAUAUGAAUGUUUCCAAAUUGUAUGUAUGCAGACCAAAAGCCACAUUGUGGAUUUAGGCCUGCAUUUUUUAU",
"ACAGCAUCAAUGCGUAUUAGAUAAGUUGGCAAUAAAAAAGGCAGAAUC-UAU-UCCAAUGAUAGGCUUUUUUGUUGU... | rfam_14_5_mafft |
CP013655.1_87072-86795 | UGAAGUAGAGAAGGUUUGAAAGAACAAAUUCAAAUGCUAAAGUAAACGGUGGGCAUGUUAUGCUGAAAAGGUUAGAGGGAUAAGCGAAGGUACUAGCUAUUUUGUGAGUUCCUCGGGCACUAUCAAAAACACAUGCCCAAUAAAGAAAGUCAAUAGCGACGUUAGGAGAGCCUAGCGGUCUAUUGACUUUCUUUAUAGUGUUUUACGGAUUAGAAGAGUUAUUUUUCUCAUUUUCUUUCUGUUUCCUUGAACUACUUGAUGGAAAAAAUUAUGAUACG | .(..((.(((...((((....))))...)))..))..)...(((.....(.(((((...))))).)....(((.(((((((.....(.((...........)).)..))))))).))).(((((.........(.......)..........(.((((......((((((.(............).))))))......)))).).........(((((((.........((.........)).......)))).))))))))............))). | [
"CP013655.1/87072-86795",
"NGLG01000001.1/3204259-3204506"
] | [
"UGAAGUAGAGAAGGUUUGAAAGAACAAAUUCAAAUGCUAAAGUAAACGGUGGGCAUGUUAUGCUGAAAAGGUUAGAGGGAUAAGCGAAGGUACUAGCUAUUUUGUGAGUUCCUCGGGCACUAUCAAAAACACAUGCCCAAUAAAGAAAGUCAAUAGCGACGUUAGGAGAGCCUAGCGGUCUAUUGACUUUCUUUAUAGUGUUUUACGGAUUAGAAGAGUUAUUUUUCUCAUUUUCUUUCUGUUUCCUUGAACUACUUGAUGGAAAAAAUUAUGAUACG",
"AGAAGUAGAAAAGGUUUGAAAGAUCUAAUUC... | rfam_14_5_mafft |
CP013830.1_2508472-2508393 | AAAAUAAGUGCUAUCCCAAAUAGCCGACAUCUAUUUUGCUUUCCGAGUAGUGCCUCUUUUGAGGCACUUUUUUUUAUUCU | ((((.(((.............(((.((.(....))).)))..........((((((....))))))))).))))...... | [
"CP013830.1/2508472-2508393",
"CP000947.1/1369035-1369112",
"L42023.1/1651160-1651083",
"CP001733.2/844055-844131"
] | [
"AAAAUAAGUGCUAUCCCAAA-UAGCC-GACAUCUAUUUUGCUUUCCGAGUAGUGCCUCUUUUGAGGCACUUUUUUUUAUUCU-",
"AUAAAAAGUGCUAUAAAAAAGUAGCC-AACA--UAUUUUGCUUUCCGAGUAGUGCCUCUUUUGAGGCACUUUUUUUGUGUU--",
"AAAACAAGUGCUAUCUUAAA-UAGCC-GACAUCUAUUUUGCUUUCCGAGUAGUGCCCCAAU---GGGGCUUUUUUUUAUUCAG",
"AAAACAAGUGCUAUAUAAA--UAGCCAAACA--UAUUUUGCUUUCCGA... | rfam_14_5_mafft |
CP014699.1_1054269-1054158 | AAUGAGAUGUUUGGUCGCUUUUCAUUAUAAGUCAUAUGGGACUUUUUUUGUAUAGCAAAAAAAGCGCCAUAAUUUCCGCAGUGGAGUUACCCACUACAGAUAUUAUAGAGCC | ((((((..((......))..))))))..(((((......)))))...................((.(.(((((.((...(((((......)))))...)).))))).).)). | [
"CP014699.1/1054269-1054158",
"AGPS01000006.1/91244-91354",
"AE007317.1/30029-30139",
"CP000023.1/791383-791493"
] | [
"AAUGAGAUGUUUGGUCGCUUUUCAUUAUAAGUCAUAUGGGACUUUUUUUGUAUAGCAAAAAAAGCGCCAUAAUUUCCGCAGUGGAGUUACCCACUACAGAUAUUAUAGAGCC",
"AAUGAGUUGUUUUGUCGCUUUUCAUUAUAGGUCAUAUGGGACUUUUUUC-UACACAAAAAUAGGCUCCAUAAUAUCCAUAGGGGAUUUACCCACUACAAAUAUUAUAGAGUC",
"AAUGAGUUGUUUUGUCGCUUUUCAUUAUAGGUCAUAUGGGACUUUUUUU-CUACACAAAAUAGGCUCCAUAAUAUCCAU... | rfam_14_5_mafft |
CP018839.1_285461-285385 | GGAGCAGCAACGAUGUUACGCAGCAGGGCAGUCGCCCUAAAACAAAGUUAGCCGAGAGGAGAAACUAUGUCUGCAAA | ...(.(.((....)).)...(.((.((((....))))(((.......))))).)...(.((...))....)..)... | [
"CP018839.1/285461-285385",
"CP011599.1/36880-36951",
"CP000650.1/38256-38185",
"CP018135.1/1913478-1913552"
] | [
"GGAGCAGCAACGAUGUUACGCAGCAGGGCAGUCGCCCUAAAACAAAGUUAGCCG--AGAGGAGAAACUAUGUCUGCAAA",
"GGAGCAGCAACGAUGUUACGCAGCAGGGCAGUCGCCCUAAAACAAAGUUAGGCCGCAUGGACACAACGCAGG-------",
"GGAGCAGCAACGAUGUUACGCAGCAGGGCAGUCGCCCUAAAACAAGGUUAGGCCGCAUGGACACAACGCAGG-------",
"GGAGCAGCAACGAUGUUACGCAGCAGGGCAGUCGCCCUAAAACAAAGUUAGGCAUCAUGG... | rfam_14_5_mafft |
CP028526.1_2609345-2609581 | UAUUGUUAAUAUAUAAUUUAAGUAUAAAUUAAAUAUUGAAUUGAUAUUUAGGUAUUUGAAAAUACCUUACAUAGAGUCAGGAGGCUUUUGCUUUCUGACUUUUUUAUUAUCAAAAUUCAAUAAUUAUAUGGAUUCAAAGUGUUAAUUUUUAUUCUAUAUUCUACUUUCCCCAAAAGUAAGAAUUAUACCCAACUUUGUAUGAUAGGCAUCUUGCCUAUCUUUUUUUUGUAAAAGUAA | .............(((((((....)))))))..(((((((((((((...(((((((....))))))).....(((((((((((((....))))))))))))).....))))))..)))))))...(((((((...(((((....)))))...)))))))((((((((.....)))))).))..........(((((.(((((((((((...))))))))........)))))))).. | [
"CP028526.1/2609345-2609581",
"CP042267.1/1636725-1636489",
"CP045224.1/2480814-2481050",
"CP026615.2/2527902-2528138",
"CP020424.2/544980-545215"
] | [
"UAUUGUUAAUAUAUAAUUUAAGUAUAAAUUAAAUAUUGAAUUGAUAUUUAGGUAUUUGAAAAUACCUUACAUAGAGUCAGGAGGCUUUUGCUUUCUGACUUUUUUAUUAUCAAAAUUCAAUAAUUAUAUGGAUUCAAAGUGUUAAUUUUUAUUCUAUAUUCUACUUUCCCCAAAAGUAAGAAUUAUACCCAACUUUGUAUGAUAGGCAUCUUGCCUAUCUUUUUUUUGUAAAAGUAA",
"UAUUGUUAAUAUAUAAUUUAAGUAUAAAUUAAAUAUUGAAUUGAUAUUUAGGUAUUUGAAAAUACCUUACAU... | rfam_14_5_mafft |
CSXB01000022.1_38641-38587 | UAUAUUUUUUUGUUUAGCAGCUUACUUCGUUGACAGACGAGGUAGGCUCUUUUUG | ...............((.(((((((((((((....)))))))))))))))..... | [
"CSXB01000022.1/38641-38587",
"AE016830.1/294479-294426"
] | [
"UAUAUUUUUUUGUUUAGCAGCUUACUUCGUUGACAGACGAGGUAGGCUCUUUUUG",
"UAUA-UUUUUUGUUUAGUAGCUUACUUCGUUGGCGGACGAGGUAGGCUCUUUUUG"
] | rfam_14_5_mafft |
CSXB01000043.1_25996-25929 | AACUGAACUUUGUUCAGUACCUUUAUUUUCUGGCGCUACUUCUUCUACUUUGGUCGGUUGAGAAGUAG | .(((((((...))))))).................(((((((((..(((......))).))))))))) | [
"CSXB01000043.1/25996-25929",
"AE016833.1/38693-38760",
"AE016830.1/146764-146697"
] | [
"AACUGAACUUUGUUCAGUACCUUUAUUUUCUGGCGCUACUUCUUCUACUUUGGUCGGUUGAGAAGUAG",
"AGCUGAACUCUGUUCAGCUCCAUUUUUUUCAGACGCUACUUCUUCUACUUUGGUCGGUUGAGAAGUAG",
"AGCUGAACUUUGUUCAGCAGCAAUUCCUUUCGGCACUACUUCUUCUGCUGUGGUUGGUUGAGAAGUAG"
] | rfam_14_5_mafft |
CU928163.2_4506827-4507078 | CCUGCGGAACUGCUGGCCCCUUAUACCGGUGAUAUCGCCGCUGAAGGAAUCAGCAAAGCCAUGCGCGGAGGCGCAAAGUUCCUGCAUCACGGCAUUAAGCGCCAGCAACGUUAUGUGGCAGAAGCCAUUACUGAAGAGUGGCGUAUGGCACCCGGUCCGCUUGAAGUGGCCUGGUUUGCGGAAGAGACGGCUGCCGUCGAGCGUGCUGUUGAUGCCCUGACCAAACGGCUGGAAAAACUGGAGGCUAAAUGA | (((.((((((((((((..((((....(((((....)))))...))))..))))).......(((((....))))).)))))).((((((((((((...((((((..........(((((....)))))..........))))))...(((.((((.(((((...))))).))))..)))......(((((...)))))....)))))).))))))((.(.((....))).)).......).)))........ | [
"CU928163.2/4506827-4507078",
"AFGW01000065.1/20277-20026",
"CP000247.1/4225935-4226186",
"CP000822.1/168320-168571",
"CP001127.1/4056791-4057042",
"U00096.2/4018001-4018252"
] | [
"CCUGCGGAACUGCUGGCCCCUUAUACCGGUGAUAUCGCCGCUGAAGGAAUCAGCAAAGCCAUGCGCGGAGGCGCAAAGUUCCUGCAUCACGGCAUUAAGCGCCAGCAACGUUAUGUGGCAGAAGCCAUUACUGAAGAGUGGCGUAUGGCACCCGGUCCGCUUGAAGUGGCCUGGUUUGCGGAAGAGACGGCUGCCGUCGAGCGUGCUGUUGAUGCCCUGACCAAACGGCUGGAAAAACUGGAGGCUAAAUGA",
"CCUGCGGAACUGCUGGCCCCUUAUACCGGUGAUAUCGCCGCUGAAGGAAUCAGAAAA... | rfam_14_5_mafft |
DS990260.1_620738-620616 | AACUUAUGUGACUAGGGAGUCACGAAGUGAGUAUGUUACUGGUACGCAGGCAGAACUCAGAUUACACUGAAAAUUUUUAUUUUCCGUGUAGUUUGAGUUUUUUUUUCUGGAAAGGAGGAUUUA | .((((.((((((......))))))....))))(.(((.((..(...(((..((((((((((((((((.((............)).)))))))))))))))).....)))...)..))))).). | [
"DS990260.1/620738-620616",
"JYHN01000013.1/41078-40956"
] | [
"AACUUAUGUGACUAGGGAGUCACGAAGUGAGUAUGUUACUGGUACGCAGGCAGAACUCAGAUUACACUGAAAAUUUUUAUUUUCCGUGUAGUUUGAGUUUUUUUUUCUGGAAAGGAGGAUUUA",
"AACUUAUGUGACUAGGGAGUCACGAAGUGAGUAUGUUACUGGUAUGCAGGCAGAACUCAGAUUACACUGAAAAUUUUUAUUUUCCGUGUAGUUUGAGUUUUUUUUUCUGGAAAGGAGGAUCUA"
] | rfam_14_5_mafft |
EF187853.1_405-577 | AGGACAGCCGUUGCCCUAGUGGUUUCGGACACACCGCCAACGCUCAGUGCGGUGCUACCGACCCGAGGUCAAGUCCCGGGGGAGGAGAAGAGAGGCUUCCCGCCUAGAGCAUUUGCAAGUCAGGAUUCUCUAAUCCCUCUGGGAGAAGGGUAUUCGGCUUGUCCGCUGUUUUU | .(((((((((.((((((...((..((((...((((((...........))))))...)))).)).........((((((((((((((((...((((.....))))....................))))))..)))).))))))..))))))..)))).)))))......... | [
"EF187853.1/405-577",
"J02077.1/418-590",
"DQ883819.1/405-577"
] | [
"AGGACAGCCGUUGCCCUAGUGGUUUCGGACACACCGCCAACGCUCAGUGCGGUGCUACCGACCCGAGGUCAAGUCCCGGGGGAGGAGAAGAGAGGCUUCCCGCCUAGAGCAUUUGCAAGUCAGGAUUCUCUAAUCCCUCUGGGAGAAGGGUAUUCGGCUUGUCCGCUGUUUUU",
"AGGACAGCCGUUGCCCUAGUGGUUUCGGACACACCGCCAACGCUCAGUGCGGUGCUACCGACCCGAGGUCAAGUCCCGGGGAAGGAGAAGAGAGGCUUCCCGCCUAGAGCAUUUGCAAGUCAGGAUUCUCUAAUCC... | rfam_14_5_mafft |
EU566860.1_10426-10503 | GUAAGUCAGACCAAUUAGUUUUGCCACCGGAUGUCAGGUAAACGGUGCUGUCUGUAACCUGGCCCCAGGUGACUGGGU | ((.((.(((((......)))).....(((.............)))....).))...)).....(((((....))))). | [
"EU566860.1/10426-10503",
"KC788512.1/10513-10588"
] | [
"GUAAGUCAGACCAAUUAGUUUUGCCACCGGAUGUCAGGUAAACGGUGCUGUCUGUAACCUGGCCCCAGGUGACUGGGU",
"GGGAGUCAGACCACUUAGUGCCACCA--GUAUGAUGAUAAGCUGGUGCUGUCUGUCCUCAUCCCCAGGAGGACUGGGU"
] | rfam_14_5_mafft |
EU924798.1_1-137 | GGCCCCAAAUGAUGAGGGUUACUUUGUACGAAUGUCAGUGAAAUUGAAUUAAACAACGAAAAAUGCUUCAUGGCUUAACGGAGAUUUAUGAGGAAAACCGAACUUGAGGCCCACGUCAGUGGCUGAAGCCAAUCAUU | (((.(((..(((((.(((....(((((.......(((((...)))))........))))).....(((((((((((....)))..))))))))....((........))))).))))).))).....)))....... | [
"EU924798.1/1-137",
"AASW01032585.1/151-15"
] | [
"GGCCCCAAAUGAUGAGGGUUACUUUGUACGAAUGUCAGUGAAAUUGAAUUAAACAACGAAAAAUGCUUCAUGGCUUAACGGAGAUUUAUGAGGAAAACCGAACUUGAGGCCCACGUCAGUGGCUGAAGCCAAUCAUU",
"GGCCCCUAAUGAUGAGGGUCACUUUGUACGGAUGUCAGUGAAAUUGAAUUAAACAACGAAAAAUGCUUCAUGGCUUAACGGAGAUUUAUGAGGAAAACCGAACUUGAGGCCCACGUCAGUGGCUGAAGCCAAUCAUU"
] | rfam_14_5_mafft |
FJ606789.2_10629-10727 | UGGGAAAGACCAGAGGUACUCGUUGAUUCACCGCCACCAAACUACACGGCACAGCACGCCGAAAAAGGUAGUUUGGAGGUUGUAAAACAGCAAGUAACU | ................((((.((((.((.((.(((....((((((..(((.......))).......))))).)...))).)).)).)))).))))... | [
"FJ606789.2/10629-10727",
"NC_017086.1/10635-10732"
] | [
"UGGGAAAGACCAGAGGUACUCGUUGAUUCACCGCCACCAAACUACACGGCACAGCACGCCGAAAAAGGUAGUUUGGAGGUUGUAAAACAGCAAGUAACU",
"UGGGAAAGACCAGAGGUACUCGCUGAUUCACCGCCACCAGACUACACGGCACAGCGCGCCGGAAAAGGUAGUUUGGAGGUUGUAAAACAACAAGUAUC-"
] | rfam_14_5_mafft |
FJ664179.1_451-603 | GAUGAUAUACCAAAAUGGUUUAUUUUAUUUUGAUGUAGAAAUUGAAUUUGAUAUAGUGCGUAGAUAACAAAUAAAAGUUCUUUAUCAAAUAAAAAAUUAGUAUAACUAUACCUUAUUUCAAAAUGAAGGAGGUAUAGUACCAUCUCAAUAUUU | ((((......((((((((......)))))))).((((..((((..((((((((.((.((.................)).)).))))))))....))))..))))((((((((((..((((...)))).))))))))))..))))......... | [
"FJ664179.1/451-603",
"ADOB01000022.1/39363-39211",
"AEJQ01000114.1/7195-7044"
] | [
"GAUGAUAUACCAAAAUGGUUUAUUUUAUUUUGAUGUAGAAAUUGAAUUUGAUAUAGUGCGUAGAUAACAAAUAAAAGUUCUUUAUCAAAUAAAAAAUUAGUAUAACUAUACCUUAUUUCAAAAUGAAGGAGGUAUAGUACCAUCUCAAUAUUU",
"GAUGAUAUACCAAAAUGGUUUAUUUUAUUUUGAUGUAGAAAUUGAAUUUGAUAUAGUGCGUAGAUAACAAAUAAAAGUUCUUUAUCAAAUAAAAAAUUAGUACAACUAUACCUUAUUUCAAAAUGAAGGAGGUAUAGUACCAUCUCAAUAUUU",
... | rfam_14_5_mafft |
FJ746361.1_1-144 | UUACUCACUCAUAAUCAAGGGCUGCCGCAUGAAGUGGUAGAAAAGCAUAUUGCAGGCCAUGCGAUAAGCCGUCUCACAAUUUGUGUGGUUAUUACUAUGCUUAUUGCUGUUGCCGUAAAUGUGCGGUGCGGGAGCCGCUGACGA | ..............(((..((((.((((((..............(((((((...(((...(((((((((.....((((...))))((((....)))).)))))))))....)))...))))))).)))))).))))..)))... | [
"FJ746361.1/1-144",
"FR775195.1/117667-117810",
"AFCN01000333.1/4643-4786",
"CP001113.1/643257-643400",
"AFCU01000310.1/357-500"
] | [
"UUACUCACUCAUAAUCAAGGGCUGCCGCAUGAAGUGGUAGAAAAGCAUAUUGCAGGCCAUGCGAUAAGCCGUCUCACAAUUUGUGUGGUUAUUACUAUGCUUAUUGCUGUUGCCGUAAAUGUGCGGUGCGGGAGCCGCUGACGA",
"UUACUCACUCAUAAUCAAGGGCUGCCGCAUGAAGUGGUAGAAAAGCAUAUUGCAGGCCAUGCGAUAAGCUGUCUCACAAUUUGUGUGGUUAUUACUAUGCUUAUUGCUGUUGCCGUAAAUGUGCGGUGCGGGAGCCGCUGACGA",
"UUACUCACUCAUAAU... | rfam_14_5_mafft |
FJ746389.1_1-144 | AUUCUUACUCAAAAAGACAAGGGAGGAAUGCCGCAAGAAACCAAAGAAAAUCAUGGGUUUCAUUAAACUUCAUUAUUGAAGAGGUUUAAUAAAGCUGGUUCUAUAGGUGCGCGCCUGCUCGUCUUUCAUUGUGCCAGCUUUUCU | ((((((.(((..........))))))))).......((((((...((...))...))))))((((((((((.........))))))))))(((((((((.(...(((((.((....)).)))))......).)))))))))... | [
"FJ746389.1/1-144",
"ABEH02000006.1/99527-99670"
] | [
"AUUCUUACUCAAAAAGACAAGGGAGGAAUGCCGCAAGAAACCAAAGAAAAUCAUGGGUUUCAUUAAACUUCAUUAUUGAAGAGGUUUAAUAAAGCUGGUUCUAUAGGUGCGCGCCUGCUCGUCUUUCAUUGUGCCAGCUUUUCU",
"AUUCUUACUCAAAAAGAAAAGGAAGGAAUACCGCAAGAAACCAAAGAAAAUCAUGGAUUCCAUUAAACUUCAUUAUUGAAGAGGUUUAAUAAAGCUGGUUCUAUAGGUGCGCGCCUGCUCGUCUUUCAUUGUGCCAGCUUUUCU"
] | rfam_14_5_mafft |
FM162591.1_1547016-1547194 | UCAAGAAGUGUUAGAUGUUGCUGAUCGCCAAGAUAACGAUAAACGCCGUACACCUAAUGGCAGAGCACAAGAAACAAUUAAUGUCAAUCUGCGCGCAUAAGCAGAACUUGUGACUAAUUGAAGUAUUAAGAAGUAGGGAGCAUGUGAGCAAUGAAAUUACCAAUUUAUUUAGACUACUC | (.((.(.......(..((.(.(..(((.........)))..).)))..).(..((...))..).(((((((......(((.(((........)))..)))......)))))).).........).)).)...((((....(((.......)))...))))................... | [
"FM162591.1/1547016-1547194",
"FN667741.1/2990610-2990432"
] | [
"UCAAGAAGUGUUAGAUGUUGCUGAUCGCCAAGAUAACGAUAAACGCCGUACACCUAAUGGCAGAGCACAAGAAACAAUUAAUGUCAAUCUGCGCGCAUAAGCAGAACUUGUGACUAAUUGAAGUAUUAAGAA----GUAGGGAGCAUGUGAGCAAUGAAAUUACCAAUUUAUUUAGACUACUC",
"UCAAGAAGUCUUAGACGUUGCUGAUCGUCAAGACAGCGAUAAACGCCGUACACCUAACGGCAGGCCUCAAGAGACGAUUAACGUUAACCUGCGUGCGUAAAC----UUUGCGGCAAACAGAAGUAU... | rfam_14_5_mafft |
FM209186.1_4393752-4393643 | AGCCUAGCAAGGGUCCGGGUUCACCGAAAUCUAUCUCAUUUGCUAGUUAUAAAUUUAUGAAAUUUGCAUAAAUUCUUCAGCUUCCUAUUUGGAGGAAGUGAAGAUGAUCG | ...(((((((((...(((.....)))...)))........))))))......(((((((.......)))))))((((((.((((((......))))))))))))...... | [
"FM209186.1/4393752-4393643",
"CP000744.1/4032440-4032331",
"AE004091.2/1559151-1559260"
] | [
"AGCCUAGCAAGGGUCCGGGUUCACCGAAAUCUAUCUCAUUUGCUAGUUAUAAAUUUAUGAAAUUUGCAUAAAUUCUUCAGCUUCCUAUUUGGAGGAAGUGAAGAUGAUCG",
"AGCCUAGCAAGGGACCGGGACGACCGAAAUCUAUCUCAUUUGCUAGUUAUAAAUUUAUGAAAUUUGCAUAAAUUCUUCAGCUUCCUAUUUGGAGGAAGUGAAGAUGAUCG",
"AGCCUAGCAAGGGUCCGGGUUCACCGAAAUCUAUCUCAUUUGCUAGUUAUAAAAUUAUGAAAUUUGCAUAAAUUCUUCAGCUU... | rfam_14_5_mafft |
FN666575.1_130143-130070 | AAAAAAAACCCCGCCAUAAGGGCAGGGGUAGACAGGGAUGUGCCGGUGGCAAGGUAAACAGGGAUAAUGUGUUU | .......((((((((.....))).))))).((((.(..(((.((.((..........)).)).))).).)))). | [
"FN666575.1/130143-130070",
"FP236842.1/124289-124216"
] | [
"AAAAAAAACCCCGCCAUAAGGGCAGGGGUAGACAGGGAUGUGCCGGUGGCAAGGUAAACAGGGAUAAUGUGUUU",
"AAAAAAAACCCCGCCAUCAUGGCGGGGGUAGACAGGGGUAUGUCUAUGGCAAGGAAAACAGGGAUAAUGUGUUA"
] | rfam_14_5_mafft |
FN666575.1_1783564-1783452 | AAGAGUUCUGGUUUUAAAAAUGGCGCACAAUGUGCGCCAUUUUUUUUGCCUGGAACCAACCUCUUCCUGUUAACAGCCACUUACUUUUUAAAACCCAUGUAAACACGCCAGAA | ....((((((((...(((((((((((((...)))))))))))))...))).))))).....(((..(((((.(((......................))).)))).)..))). | [
"FN666575.1/1783564-1783452",
"J01577.1/580-692"
] | [
"AAGAGUUCUGGUUUUAAAAAUGGCGCACAAUGUGCGCCAUUUUUUUUGCCUGGAACCAACCUCUUCCUGUUAACAGCCACUUACUUUUUAAAACCCAUGUAAACACGCCAGAA",
"AAGAGUUCUGGUUUUAAAAAUGGCGCACAAUGUGCGCCAUUUUUUUUGCCUUGAACCAACCUCUUCCUGUUAACAGCCACUUACUUUUUAAAACCCAUGUAAACACGCCAGAA"
] | rfam_14_5_mafft |
FN666575.1_2356768-2356621 | AAAAAGAAAUGACCCGCACGGGGGAGCCGUGUGGGCCUAAGAUGUGACGAGUAUCGUUCAUCCUGCAUGCCUUUACAGACACGAUUCAGAACAGAUGGUUAUGCUAUUUGGAUUUUAUCGUUAGGAGCCUGUGAAUUCUGGCAGGAAA | ............(((((((((.....)))))))))..........(((((...)))))..((((((..(..(((((((.((((((......((((((((...))))))))......))))).....).)))))))..)..)))))).. | [
"FN666575.1/2356768-2356621",
"FP236842.1/1571474-1571621"
] | [
"AAAAAGAAAUGACCCGCACGGGGGAGCCGUGUGGGCCUAAGAUGUGACGAGUAUCGUUCAUCCUGCAUGCCUUUACAGACACGAUUCAGAACAGAUGGUUAUGCUAUUUGGAUUUUAUCGUUAGGAGCCUGUGAAUUCUGGCAGGAAA",
"AAAAAGAAAUGACCCGCACGGGGGAGCCGUGUGGGCCUAAGAUGUGACGAGGAUCGUUCAUCCUGCAUGCCUUUACAGACAUGAUUCAGAACAGAUGAUUAUGCUAUUUGGAUUUAAUUGUUAGGAGCCUGUGCAUCUUGGCAGGAAA"
] | rfam_14_5_mafft |
FN666575.1_2438083-2438169 | CAUUUUUAUUUCAUAAUUACCUUCGUUUCCCGAAAUGAACUGUACGACUUAGUAUUCACGCCAGGCUUAAUGCCUGGCGUUUUUUUU | ....((((((((......((....)).....))))))))..((((......))))..(((((((((.....)))))))))....... | [
"FN666575.1/2438083-2438169",
"FP236842.1/1495952-1495866"
] | [
"CAUUUUUAUUUCAUAAUUACCUUCGUUUCCCGAAAUGAACUGUACGACUUAGUAUUCACGCCAGGCUUAAUGCCUGGCGUUUUUUUU",
"AUUUUUUAUUUCAUAAUUACCUUCACUUGCCGAAAUGAACUGUAUGACUUCAUAUUCCCGCCAGGCUUAAUGCCUGGCGUUUUUUUA"
] | rfam_14_5_mafft |
FN666575.1_2610835-2610754 | CACGCCCCUCUUUGACUGCUCCAUCCCUGUGUAGUUAUUAGUGUUGUCACUGACCGACCGCCUCUUUGCGGUCGGUUUUUUU | ............(((((((...........)))))))((((((....))))))((((((((......))))))))....... | [
"FN666575.1/2610835-2610754",
"FP236842.1/1310637-1310717"
] | [
"CACGCCCCUCUUUGACUGCUCCAUCCCUGUGUAGUUAUUAGUGUUGUCACUGACCGACCGCCUCUUUGCGGUCGGUUUUUUU",
"CACGCCUCCUCUUUACCCCUUCAUCCCUGUGUAGUCAUUCGUGUUGUCACUGACCGACCGCC-CUUUGCGGUCGGUUUUUUU"
] | rfam_14_5_mafft |
FOOE01000042.1_7895-7652 | CUUUCUUACGCAUAAUAGACCACCUCUAUACAUUUUACUGUUCCUGUUGAAUUUGAAACAGGUAUAGAAAAACGUGUUAAAUAGUUUUUCAGUUCCUAUUAAAUUACAUUCUUAAAAGCACUACUCAACUUCAAUAAAAAAACCGUUGUUUGGAAAUGCUAUUCGUGCUGUAAAAAUAUAAAUCUCACUUUCAAAUGGCGGUUUAAUGGAGAUAAACGUCGCCAUGAGAUAUAUUACAUAUAGU | .(.(..(.....(((((..........((((.((((.((((.((((((........)))))).)))).)))).))))(.((......)).).....))))).)..).)..........((.(.((.(((...............))...).)).).))....................................(((.((((.(...........).)))).)))................... | [
"FOOE01000042.1/7895-7652",
"GG666045.1/47521-47758",
"AFUH01000001.1/1892352-1892116",
"AENN01000009.1/2656-2885",
"MRAE01000009.1/40166-39937",
"LVZN01000020.1/25806-26035",
"LTBB01000003.1/122875-122646",
"LOJO01000001.1/352240-352469",
"LFIL01000020.1/44798-44569",
"KQ965586.1/7397-7168"
] | [
"CUUUCUUACGCAUAAUAGACCACCUCUAUACAUUUUACUGUUCCUGUUGAAUUUGAAACAGGUAUAGAAAAACGUGUUAAAUAGUUUUUCAGUUCCUAUUAAAUUACAUUCUUAAAAGCACUACUCAACUUCAAU-AAAAAAACCGUUGUUUGGAAAUGCUAUUCGUGCUGUAAAAAUA-UAAAUCUCACUUUCAAAUGGCGGUUUAAUGGAGAUAAACGUCGCCAUGAGAUAUAUUACAUAUAGU",
"CUUUUUUACGCAUAGUAGACCACCUCUAUACAUUUUACUGUUCCUAUUGAAUUAGAAACAGGU... | rfam_14_5_mafft |
FP236842.1_2713474-2713608 | AGAUUAUCCAAAACUAUCUGGUAUUGGCUACUAUGUAAGCCAUGUUCAGACCGGAUCGUGUCAUGAUCAUGAUACUCAUCAGGAUGGUGCCAACCCGCCCGGCAUGCGCCCGUCACUCUGUACCCUGCACACAAU | .................(.((((((((((........)))))........((.(((.(((((((....)))))))..))).))..(((((...((.....))...))))).........))).)).)........ | [
"FP236842.1/2713474-2713608",
"FN666575.1/1267525-1267392"
] | [
"AGAUUAUCCAAAACUAUCUGGUAUUGGCUACUAUGUAAGCCAUGUUCAGACCGGAUCGUGUCAUGAUCAUGAUACUCAUCAGGAUGGUGCCAACCCGCCCGGCAUGCGCCCGUCACUCUGUACCCUGCACACAAU",
"AGAUUAUCC-AAACUCUCAGGUAUUGGCUACUAUGUAAGCCAUAUUCAUACCGGAUCGUGUCAUGACUAUGAUACUCAUCAGGAUGGUGCCCACCCGCCCGGCAUGCGCCCGUCACUCUGUACCCUGCACACAAU"
] | rfam_14_5_mafft |
FP929037.1_2996677-2996604 | GCUGCUCGAAACUUUGCACACCUCUUCGUGGUGAGCAGCAGGCAACGAUCUUAUGGUCGGCUAAGAAUGCAGAG | (((((((............(((.......))))))))))......(((((....)))))............... | [
"FP929037.1/2996677-2996604",
"BABA01033214.1/645-573",
"BABG01012773.1/549-476",
"ADJS01011862.1/3107-3034",
"ADJS01008875.1/12497-12569"
] | [
"GCUGCUC-GAAACUUUGCACACCUCUUCGUGGUGAGCAGCAGGCAACGAUCUUAUGGUCGGCUAAGAAUGCAGAG",
"GCUGCUC-UGAUAAUCACACACCUCUCCGUGGUGAGCAGCAGGCAACGAUCUUAUGGUCGGCUGAG-AUGUGAUG",
"GCUGCUCGUAAUAAUCACACACCUCUUCGUGGUGAGCAGCAGGCAACGAUCUUAUGAUCGGCGAAG-AUGUGAUG",
"GCUGCUCGUAAUAAUCACACACCUCUUCGUGGUGAGCAGCAGGCAACGAUCUUAUGGUCGGCGAAG-AUGUG... | rfam_14_5_mafft |
FP929039.1_1384329-1384246 | ACAGUACAAACUGAGCAGACCAUUGGCGAAAGCCAAGGAGUCGGGCCAUCAUGGCAGUGGAAUCUUUACAUCCACGGGACAGUA | .........((((.....((..(((((....)))))...))...(((((.))))).(((((.........)))))....)))). | [
"FP929039.1/1384329-1384246",
"ABEY02000006.1/25295-25212"
] | [
"ACAGUACAAACUGAGCAGACCAUUGGCGAAAGCCAAGGAGUCGGGCCAUCAUGGCAGUGGAAUCUUUACAUCCACGGGACAGUA",
"ACAGUACAAACUGAGCAGACCAUUGGCGAAAGCCAAGGAGUCGGGCCAUCAUGGCAGUGGAAUCUUUACAUCCACGGGACAGUA"
] | rfam_14_5_mafft |
FP929045.1_1643856-1643803 | ACGGAUGCCUUGACGGGCCGCACCGAACGAAAAGCGACCCGAUCCCACACCCCG | .(((........[[[[[.[[[.)))........]]].]]]].]........... | [
"FP929045.1/1643856-1643803",
"BAAX01005253.1/418-369",
"AECU01000219.1/26955-26906",
"FP929045.1/1646768-1646717",
"FP929045.1/1646016-1645965",
"FP929045.1/1645558-1645506",
"FP929045.1/1644472-1644421",
"BAAX01004489.1/1359-1310",
"FP929046.1/2710234-2710185",
"AECU01000219.1/26265-26216"
] | [
"ACGGAUGCCUUGACGGGCCGCACCGAACG---AAAAGCGACCCGAUCCCACACCCCG",
"ACGGAUACCUUGACGGGCCGCAC----CG---CAAAGCGACCCGAUCCCACCGCCCC",
"CCGGAUACCUUGACGGGCCGCAC----CG---AAAAGCGACCCGAUCCCACCACCCC",
"CCGGACACCUUGACGGGCCGCAC----CGC-UGAAAGCGACCCGAUCCCAACACCCC",
"CCGGAUACCUUGACGGGCCGCACC--ACG---AAAAGCGACCCGAUCCCACCACCCC",
"... | rfam_14_5_mafft |
FP929045.1_1646504-1646448 | GCGGACACUUUCAAGGGCUGCACCGCUGCCGCAAAAGCAACCCUAUGCCACCGCCCC | ((((........[[[[[.[[[.))))..........]]].]]]].]........... | [
"FP929045.1/1646504-1646448",
"BABF01012214.1/29-85",
"AECU01000219.1/27459-27404"
] | [
"GCGGACACUUU-CAAGGGCUGCACCGCUGCCGCAAAAGCAACCCUAUGCCACCGCCCC",
"GCGGACACUUU-CAAGGGCUGCACCGCUGCCGCAAAAGCAACCCUAUGCCACCGCCCC",
"GCGGACACUUUGCAAGGGCUGCACCGCU--CAACAAAGCAACCCAUGCCCACCACCCC"
] | rfam_14_5_mafft |
FP929045.1_3224685-3224616 | GCCGCUCAGAUAUGCUACCUCUCCGUGGUGAGCAGCAGGCAACGAGAGUUUUCUCUCGGCUAAAGCAUAU | ((.((((.........(((.......))))))).))......(((((......)))))............ | [
"FP929045.1/3224685-3224616",
"ADJS01010097.1/877-810",
"ADJT01007140.1/494-426",
"ADJT01006046.1/233-165",
"FP929046.1/260263-260332",
"BK006894.1/1-68",
"ABED02000029.1/675962-676029",
"ABED02000029.1/413324-413255",
"BAAX01024167.1/572-504"
] | [
"GCCGCUCAGAUAUGCUACCUCUCCGUGGUGAGCAGCAGGCAACGAGAGUUUUCUCUCGGCUAAA-GCAUAU",
"GUUGCUCAAGUGUGCUACCUCUCCGUGGUGAGCAGCAGGCAAC--GGAUUAUAAUCCGGCUAAA-GCAUAU",
"GCUGCUCAAAUGUGCUACCUCUCCGUGGUGAGCAGCAGGCAAC--GGAUAAUUAUCCGGCUAAAGGCACAU",
"GCUGCUCAUAUAUGCUACCUCUCCGUGGUGAGCAGCAGGCAAC--GGAUAAUUAUCCGGCUAAAGGCACAU",
"GCCAUCC... | rfam_14_5_mafft |
FP929046.1_562024-562125 | GAGCAACUUAGGAUUUUAGGCUCCCCGGUGCCACUCGAGCGGCGCUGGGCAAAACCCACAGGAGCUGGCGGUUCCUGUGCGGUCAAAAUCAAACCGCUGGAG | ...........((((((......(((((((((........)))))))))....(((.(((((((.......)))))))..))).))))))............ | [
"FP929046.1/562024-562125",
"BABG01013292.1/257-357",
"BABD01012433.1/319-419",
"BAAY01013224.1/926-826",
"FP929045.1/1765647-1765748",
"BAAX01019688.1/382-483",
"BAAY01002983.1/1264-1163",
"ADJS01009939.1/10976-11077",
"BAAZ01007046.1/1247-1147",
"BABA01010993.1/1076-1176"
] | [
"GAGCAACUUAGGAUUUUAGGCUCCCCG-GUGCCACUCGAGCGGCGCUGGGCAAAACCCACAGGAGCUGGCGGUUCC-UGUGCGGUCAAAAUCAAACCGCUGGAG",
"GAGCAACUUAGGAUUUUAGGCUCCCCG-GUGCGUCUCGAACCGCGCCGGGCCAAACCCACAGGGGCUGGCGG-UCC-UGUGCGGUCAAAAUCUUUCCGCUGGAG",
"GAGAAACUUAGGAUUUUAGGCUCCGCU-GCCGGCUGC-UGGUCGGCAGCGCAAACCCCGCA-AGGCUGGCGGUCUUGCGCGUGGUCAAAAUCUAU... | rfam_14_5_mafft |
FP929062.1_241377-241311 | ACACGUUGCGCCGUGUAUAAAUAGCCAGUUAGGGCGCAAGCGUCCCGGCAUUUUGCCGGGGGUCUGG | ((((..[[[[[.))))........((((.....]]]]]....(((((((.....)))))))..)))) | [
"FP929062.1/241377-241311",
"ADGC01049496.1/241-175"
] | [
"ACACGUUGCGCCGUGUAUAAAUAGCCAGUUAGGGCGCAAGCGUCCCGGCAUUUUGCCGGGGGUCUGG",
"ACACGUUGCAACGUGUAUAAAUAGCCCUUUAGGUUGCAAGCGUCCCGCCCAUGUGGCGGGGGUAGGG"
] | rfam_14_5_mafft |
FQ312003.1_244448-244493 | ACAGCAAUUUUGCGUUACCUGUUAAUCGAGAUUGAAACACAUGAAA | ....((((((((.((((.....))))))))))))............ | [
"FQ312003.1/244448-244493",
"CAAZ01000083.1/29518-29473",
"CU928158.2/202568-202613",
"AAJX02000015.1/55083-55128"
] | [
"ACAGCAAUUUUGCGUUACCUGUUAAUCGAGAUUGAAACACAUGAAA",
"ACAGCAAUUUUGCGUUACCUGUUAAUCGAGAUUGAAACACAUAGAA",
"ACAGCAAUUUUGCGUUAUCUGUUAAUCGAGACUGAAACACAUGAAA",
"ACAGCAAUUUUGCGUUAUCUGUUAAUCGAGACUGAAAUACAUGAAA"
] | rfam_14_5_mafft |
FQZB01000017.1_29570-29813 | CUUUGUUACGCAUAUCUAAUCACCUAAGUACAAUCUACAGUUCCUAAUAAUUGUGUAACAGGUAUAGAAAAACGUAUUAUUAGGUUUUAUAAUUCUGAUUAUGUAUUGUUUGAAAAAAAUAUACUGUUGUACGGUAAAUAAAAAAACCGCUAUUACAGCAGUAUCCUUUUCUUGCGCUCAUUUAAAUAUAGUUAUACGGCGGUUUUGAAUAAUUGAAGCUGUCGUAUUUUUUUCUUGAAAUUCG | .(((..((..(.((..(..........((((..(.(.(.((.(((..((......))..))).)).).).)..))))(((.(....).))).....)..)).))).......)))......(((((((((.(((............))).....)))))))))..............................(((((.((((((..........)))))).)))))................. | [
"FQZB01000017.1/29570-29813",
"CM001240.1/6241145-6240902"
] | [
"CUUUGUUACGCAUAUCUAAUCACCUAAGUACAAUCUACAGUUCCUAAUAAUUGUGUAACAGGUAUAGAAAAACGUAUUAUUAGGUUUUAUAAUUCUGAUUAUGUAUUGUUUGAAAAAAAUAUACUGUUGUACGGUAAAU-AAAAAAACCGCUAUUACAGCAGUAUCCUUUUCUUGCGCUCAUUUAAAUAUAGUUAUACGGCGGUUUUGAAUAAUUGAAGCUGUCGUAUUUUUUUCUUGAAAUUCG----",
"CUUUGUUACGCAUAUUUAAUCACCUAAGUAUAUUCUA-GGUUCCUAAUAAUUGUGUAACA... | rfam_14_5_mafft |
FR667692.1_20575-20683 | UCAUUGUGAUCUGAACAGGCGGUGAACGUAACACGAGGUUCAUGCAGCUGGGCUGCAAUUAUUUGCGGCAGCAGACUAUGUAUUCUAAGGGCAUAUCUGUGGGACAGUU | ..........(((.....((.(((((............)))))...))...(((((........))))).(((((....................)))))....))).. | [
"FR667692.1/20575-20683",
"CP001603.1/69513-69621",
"FR667693.1/43791-43683",
"ACHL01000004.1/2975-2867",
"ACCR02000006.1/49989-49881"
] | [
"UCAUUGUGAUCUGAACAGGCGGUGAACGUAACACGAGGUUCAUGCAGCUGGGCUGCAAUUAUUUGCGGCAGCAGACUAUGU--AUUCUAAGGGCAUAUCUGUGGGACAGUU",
"UCAUUGUGAUCUGAACAGGCGGUGAACGUAACACGAGGUUCAUGCAGCUGGGCUGCAAUUAUUUGCGGCAGCAGACUAUGU--AUUCUAAGGGCAUAUCUGUGGGACAGUU",
"UCAUUGUGAUCUGAACAGGCGGUGGACAU-AUAAAAGGUCCAUGCAGCCGGGCUGCAAUU-UUUGCGGCAGCAGAGUAUGU... | rfam_14_5_mafft |
FR729477.2_1349969-1349924 | AUCAGACGGCAGCAACGAAAUGCCGAAAGAUAGCAAAAGAAUCAGU | (((...(((((.........)))))...)))............... | [
"FR729477.2/1349969-1349924",
"CP000950.1/2587430-2587385",
"ACCB01000063.1/9680-9725",
"AALC02000028.1/302-257"
] | [
"AUCAGACGGCAGCAACGAAAUGCCGAAAGAUAGCAAAAGAAUCAGU",
"AUCAGACGGCAGCAACGAAAUGUCGAAAGAUAGCAAAAGAAUCAGU",
"AUCAGACGGCAGCAACGAAAUGUCGAAAGAUAACAAAAGAAUCAGU",
"AUCAGACGGCAGUAACAAAAUGUCGAAAGAUAGCAAAAGAAUCAGU"
] | rfam_14_5_mafft |
FR729477.2_2237775-2237914 | UAGGACGAUCCGCUGGCGCAUGACGUUGUACUUUAAAUAUAGUGUCGAAAUAACCUUGAAAAUUUGAGGGAUGACCUCAUCUAAUCUCCAGUAGCAAUUUUGACCAAUAUUGGAGGUGUUAUGCGUCUGGAUCGUCUUAC | .(((((((((((..((((((.(((((..((.(......)))..))........((((((....))))))((((....))))..((((((((((..............))))))))))))).))))))))))))))))).. | [
"FR729477.2/2237775-2237914",
"CP000950.1/3676769-3676631",
"CP000720.1/3621081-3620943",
"ACCB01000068.1/4896-5035",
"CP002773.1/904568-904707",
"CP002505.1/778739-778878"
] | [
"UAGGACGAUCCGCUGGCGCAUGAC-GUUGUACUUUAAAUAUAGUGUCGAAAUAACCUUGAAAAUUUGAGGGAUGACCUCAUCUAAUCUCCAGUAGCAAUUUUGACCAAUAUUGGAGGUGUUAUGCGUCUGGAUCGUCUUAC",
"CAGGACGAUCCGCUGACGUAGAAC-GCAUUAUUUU-AAUAUAGUGUCAAAAUAACCUUGAAAAAUUGAGGGAUGACCUCAUUUAAUCUCCAGUAGCAAUUUUGACCAAUAUUGGAGGUGUUAUGCGUCUGGAUCGUCUUAC",
"UAGGGCGAUCCGCUGACGUAG... | rfam_14_5_mafft |
FR729477.2_475129-475277 | CUAUCUGAGUCUAAGGCGAAGUCGCUGGUAGCAGUACUUUGAAGCUAAAGUUUUAAGCCAAAACGACCAUAAAUACAGACUUGAUAAUCAUAUUCACUGAUGACGUCAAAAGGGUUUCCAUGACACAACAGCCACAAGUUAAAUACCGU | ...((((.((.((.(((....(.(((................))).).........)))..........)).)).)))).................(((.((..((((...((....)).)))).)).))).................. | [
"FR729477.2/475129-475277",
"CP000950.1/2907108-2906974",
"AALC02000062.1/20789-20924",
"AALD02000003.1/114534-114669"
] | [
"CUAUCUGAGUCUAAGGCGAAGUCGCUGGUAGCAGUACUUUGAAGCUAAAGUUUUAAGCCAAAACGACCAUAAAUACAGACUUGAUAAUCAUAUUCACUGAUGACGUCAAAAGGGUUUCCAUGACACAACAGCCACAAGUUAAAUACCGU",
"CUAUCUGGGUCUGGGGGAACGUCGCUAAUAGCAGCGAAAUUCA--------------CCCCAAUUACGACAGGCACAGACCCGAUAAUCAUACUCACUGAUGACGUCAAAAGGGUUUCUAUGACACAACAGCCGCAAGCUAAAUACCGU",
"CUAUC... | rfam_14_5_mafft |
FR799008.1_90689-90589 | CGUGUGAUGACAUACAGAGUGUGCGGACACGCCUAUCGCGUAGCUGCCGGCUGUGCGCGCCCGACCAACUACUGUAUUUCAUGGGUGAACAAUCUCUGAUG | (((.(.(((..((((((...((..............(((((((((...)))))))))..........))..))))))..))).)))).............. | [
"FR799008.1/90689-90589",
"LGTL01000019.1/510774-510874",
"FR796465.1/91973-91873"
] | [
"CGUGUGAUGACAUACAGAGUGUGCG-GACACGCCUAUCGCGUAGCUGCCGGCUGUGCGCGCCCGACCAACUACUGUAUUUCAUGGGUGAACAAUCUCUGAUG",
"UGUGUGAUGAUGUACAGAGUCUGCGAAACACGCAGGUCGCGGAGCC-CCGGCUGUGCGCGCCAAUUGAACUGCUGUAUUUCUUGGGUGAACAAUCUCUGAUG",
"CGUGUGAUGAUGUACAGAGUGUGCG-AAGACGCAUGUCGCGUAGCCGCCGGCUGUGCGCGCCUGACGAACUACUGUAUUUCACGGGUGAACAAUCUCUG... | rfam_14_5_mafft |
FR845719.1_2617735-2617827 | CCGCGCUCCUGCUCGUGAUCGUCUUCUCAACCUUCACCGGGCAGGCGGAUGAAAGAAGAACCCCCGCGAUGACGUGAAUCGCGGGGGUUCUUC | (((....(((((((((((..((.......))..)))).))))))))))......((((((((((((((((.......)))))))))))))))) | [
"FR845719.1/2617735-2617827",
"AL645882.2/2860741-2860830",
"CP007699.2/5812507-5812418",
"CP002475.1/4911792-4911702",
"CP006259.1/3228235-3228325",
"FN554889.1/6649486-6649399"
] | [
"CCGCGCUCCUGCUCGUGAUCGUCUUCUCAACCUUCAC-CGGGCAGGCGGAUGAAAGAAGAACCCCCGCGAUGACGUGAAUCGCGGGGGUUCUUC",
"--UCGUCCCGCCUCGUGAUCGUCUUCUCAACCUUCAC-CGGGCGGGCGGAAUGA-GGAAGGCCCCCGCGAGGACGUGACUCGCGGGGGCCUUCU",
"--GCGUCCCGCCUCGUGAUCGUCUUCUCACCCUUCAC-UUGGCGGGCGGAAUGA-GCGAAGCCCCCGCGAGGACGUGACUCGCGGGGGCUUCGU",
"--ACGUCCUGCCUCG... | rfam_14_5_mafft |
FR886343.1_80340-80440 | AAUAAGGCGGUGCUUGAUAAUGAGAUAGAGGAGGAGAGAAGACUUAUGUAUGUUGCCAUGACAAGGGCAAAAGAAAAGCUGUAUCUUGUAUAUCCCAUAAA | ...(.((..(.........(..(.....(((...........))).....)..)..(..((.(..(((.........))).).))..)..)...)).)... | [
"FR886343.1/80340-80440",
"CP001104.1/1249505-1249408",
"FR903015.1/39738-39640"
] | [
"AAUAAGGCGGUGCUUGAUAAUGAGAUAGAGGAGGAGAGAAGACUUAUGUAUGUUGCCAUGACAAGGGCAAAAGAAAAGCUGUAUCUUGUAUAUCCCAUAAA",
"AAUAAGGCAGUUCUUGAUGAGCAGAUAGAAGAGGAAAGAAGACUUUUUUAUGUUGCAAUGACAAGGGCAAAAGAAAAGUUGUAUCUUCUGUCCCCCAA---",
"AAUAAAGCAGUGCUUGAUUAUGAGAUAGAAGAGGAGAGAAGGCUUAUGUAUGUCGCGAUGACAAGGGCAAAAGAAAAGUUGUAUCUGUUAUAUGCUAAA--... | rfam_14_5_mafft |
GL872207.1_22595-22680 | UGGCAGACUGACUGGAGCCGUAGAAAUAACUGUAACUGUCACUGACCAGUUGUCUGAAUAACAGGUCCGGGUCCGGUCUGCCGCCA | .(((((((((.(((((.((............(((((((........)))))))..........)))))))...))))))))).... | [
"GL872207.1/22595-22680",
"AE006471.2/80645-80560"
] | [
"UGGCAGACUGACUGGAGCCGUAGAAAUAACUGUAACUGUCACUGACCAGUUGUCUGAAUAACAGGUCCGGGUCCGGUCUGCCGCCA",
"UGGCUGACUGGCUGGAGCCAUAGAAAUAACUGUAACUGUCACUUACCAGUUCCCUGAAUAACAGGUCAGGGUCCGGCCUGCCCCCA"
] | rfam_14_5_mafft |
GU293728.1_349-438 | AAUGACUAUUAACUAUAUAUAAGAUAUUAAGACAAAAAGAAUCAUAAAUCUAACAAGGGGAUUAUGAUACAUCUAGUUGUAGUUGAUUUU | .......(((((((((..((.((((...............((.((...(((....)))..)).)).....)))).)).)))))))))... | [
"GU293728.1/349-438",
"CP002686.1/19219613-19219701",
"ADBK01000305.1/64465-64543"
] | [
"AAUGACUAUUAACUAUAUAUAAGAUAUUAAGACAAAAAGAAUCAUAAAUCUAACAAGGGGAUUAUGAUACAUCUAGUUG-UAGUUGAUUUU",
"AAUGACUAUUAACUAU-UAUAAGAUAUUAAGACAAAAAGAAUAAUAAAUCUAACAAGGGGAUUAUGAUACAUCUAGUUG-UAGUUGAUAUC",
"AAUGACUAUAUUU----UAUAAGAUA-UAAGACAAAAAGAAUAAUAAAUCUAACAAGGGGAUUAUGAUACAUCUAGUUGAUAGU-------"
] | rfam_14_5_mafft |
HE574573.1_10177-10235 | GCUAGCGCAAGGAAGGAAAGUUGCAGACUACCUUGGGUGUUGACGACACUCCGCCCCCA | ....(((.....((((.(..........).))))((((((.....)))))))))..... | [
"HE574573.1/10177-10235",
"KC464457.1/10243-10301"
] | [
"GCUAGCGCAAGGAAGGAAAGUUGCAGACUACCUUGGGUGUUGACGACACUCCGCCCCCA",
"UUCAGCGCAAGGAAGGAAAGCUGGACGCUACCUUAGGUGGUGACGACACCUCGCCCCCA"
] | rfam_14_5_mafft |
HE574573.1_10405-10461 | CCACCCGCAAGGGGAGGGUUUUCUAACUCUCCGGGUGUUGACGACACCCCGGCCCCA | ....(((.....((((((........))))))((((((.....)))))))))..... | [
"HE574573.1/10405-10461",
"KX652375.1/10551-10607",
"MF582365.1/10405-10461"
] | [
"CCACCCGCAAGGGGAGGGUUUUCUAACUCUCCGGGUGUUGACGACACCCCGGCCCCA",
"CCACCCGCAAGGGGGGAGUUUUCUAACUCCCCGGGUGUUGACGACACCCCGGCCGCA",
"CCACCCGCAAGGGGGGAGAUUUCCAACUCCCCGGGUGUUGACGACACCCCGGCCCCA"
] | rfam_14_5_mafft |
HE971709.1_5629384-5629480 | CCAAGUCCCGUCGCGAUAACCCCCCCCGGCGCCGGGACUCUCCCGAGCCGGGUCUCGGCGCCCUAACCCCCCCUGGGCGCCGGGGUCCGGCUCCUUU | ....((((((.(((..............))).))))))......(((((.((.((((((((((...........)))))))).)).))))))).... | [
"HE971709.1/5629384-5629480",
"AL645882.2/3510186-3510095",
"FN554889.1/5877015-5877107",
"CP013743.1/5887589-5887680"
] | [
"CCAAGUCCCGUCGCGAUAACCCCCCCCGGCGCCGGGACUCUCC-CGAGCCGGGUCUCGGCGCCCUAACCCCCCCUGGGCGCCGGGGUCCGGCUCCUUU",
"CCACGUCCCGACGC----ACUCCCCCCGGCGCCGGGAC--UUCCCGAGCCGGGCUCGGCUGCCCCUACCCCCCUGGGGCGCCGCAGCCCGGCUCCUUC",
"CCAAGUCCCGACGC----UCUCCCCCCAGCGCCGGGACUCUCCGAGAGCCGGGCCUCGGCGCCUCCCCCCCCCCU-GGCGCCGAGGCCCGGCUUCUUU",
"CCA... | rfam_14_5_mafft |
HG322950.1_5644547-5644253 | GAAAUUAUCGUCCUCGGCGGACAACAGGGCGUGAAUGAAGUCUGGGGGAAUGUCCGCGAAGCGAAUGGGCGUCCGGCGCAUCUCACCGAACUCUGCUAUCAAUUUGUUAUCACUGCUGUAAACGCGCAGCGGGAUCUGCAGCUGCACGUUACGCAGGGCGUCUACCGAGGGCAGGUUGGGACUGAGGUAGAGAUAAGCGCCGCUUAAACUGAGCAGCACUCCACAAAAUAUGGCGACGCAAGUCCACCACAGAAACUUCAGCAGGCGCAUUGGAAGGUCUUGGAUUUCCAGGGAA | .........((((((((.(((...(.((((.........)))).).((.(((.(..((..((......))...))..)))).)).(.(....).).......((((((.(....((((((.((.((...)).).).))))))...).)....))).))..))).))))))))...((((((.(..((.........((((((((.((.....((..(.(.(..........)).)..))...(.(......).)..)).))).)))))..........))...).)))))).... | [
"HG322950.1/5644547-5644253",
"AE004091.2/5681167-5680874",
"CP004143.1/5076814-5076520"
] | [
"GAAAUUAUCGUCCUCGGCGGACAACAGGGCGUGAAUGAAGUCUGGGGGAAUGUCCGCGAAGCGAAUGGGCGUCCGGCGCAUCUCACCGAACUCUGCUAUCAAUUUGUUAUCACUGCUGUAAACGCGCAGCGGGAUCUGCAGCUGCACGUUACGCAGGGCGUCUACCGAGGGCAGGUUGGGACUGAGGUAGAGAUAAGCGCCGCUUAAACUGAGCAGCACUCCACAAAAUAUGGCGACGCAAGUCCACCACAGAAACUUCAGCAGGCGCAUUGGAAGGUCUUGGAUUUCCAGGGAA",
"GAAAUUGUCGUCCU... | rfam_14_5_mafft |
HM488116.1_10695-10775 | CAAUGUCAGACCACGCUACGGACGUGGCUACGUCUAGGCGGAGAGUGGCAGGUCUGCGAUAGUGCCCCAGGAGGACUGGGU | ....(((((((.................(((.............)))....)))))..)).....(((((.....))))). | [
"HM488116.1/10695-10775",
"AY765264.1/10603-10676",
"GQ851605.1/10632-10702"
] | [
"CAAUGUCAGACCACGCUACGGACGUGGCUACGUCUAGGCGGAGAGUGGCAGGUCUGCGAUAGUGCCCCAGGAGGACUGGGU",
"AGUUGUCAGACCAC---ACGCAAGUG--UGCUACUCUGCGAAGAGUA--CUGUCUGCGUUAGAGCCCCAGGAGGACUGGGA",
"CACCGUCAGACCAC---ACCGAGGUG--UGCCACUCAGCGGAGAGUG--CGGUCUGCGC---AGCCCCAGGAGGACUGGGU"
] | rfam_14_5_mafft |
HM488160.1_10500-10580 | GAAAGUCAGGCCGGGAAGUUCCCGCCACCGGAAGUUGAGUAGACGGUGCUGCCUGCGACUCAACCCCAAGGAGGACUGGGU | ....(((((((((((.....))))...(((.............)))....)))))..)).....(((.((.....))))). | [
"HM488160.1/10500-10580",
"AY765264.1/10442-10521",
"KT229574.1/10442-10521",
"AY277251.1/10451-10529",
"AY632545.2/10490-10570",
"JX236040.3/10489-10567"
] | [
"GAAAGUCAGGCCGGGA--AGUUCCCGCCACC-GGAAGUUGAGUAGACGGUGCUGCCUGCGACUCAACCCCAAGGAGGACUGGGU",
"AGAAGUCAGGCCAGCU--UUAAGCUGCCACC-GGAUGUCGAGUAGACGGUGCUGCCUGCAGCUCUUCCCC-AGGAGGACUGGGU",
"UGGAGUCAGGCCAGC---AAAAGCUGCCACCGGGAUACUGAGUAGACGGUGCUGCCUGCGUCUCAGUCCC-AGGAGGACUGGGU",
"UGUAGUCAGGCCGGCA--AA-CGCCGCCACC-GGAAGUUGGGUAU... | rfam_14_5_mafft |
JGZP01000022.1_25831-25917 | CGUAUCAUUGUGCCUCGCCUGCGCCGGAAGUCCCUAGGACAUCCCGCGGCCCGCGGGGCGAUAAGUCCGAAAGAGGGAUGAUAUGAC | (((((((((.(((((((((.((.......................)).)...))))))))......((......))))))))))).. | [
"JGZP01000022.1/25831-25917",
"JGYS01000022.1/135113-135034"
] | [
"CGUAUCAUUGUGCCUCGC----CUGCGCCGGAAGUCCCUAGGACAUCCCGCGGCCCGCGGGGCGAUAAGUCCGAAAGAGGGAUGAUAUGAC",
"CGUAUCAUUGUGCCCCGCACUUCCGGGCCCGAAGCGGCCG-----------CGUAUGCGAGGCGAUAAGUCCGAAAGAGGGAUGAUAUGAC"
] | rfam_14_5_mafft |
JMJF01000005.1_93013-92953 | ACUCAACCCAUGAAAGUAGACACCCCACCAUAAGGGGAUGAGCGAAAUCAUGGGUUUUUUG | ....(((((((((.....(.((.(((.......)))..))..)....)))))))))..... | [
"JMJF01000005.1/93013-92953",
"CP000253.1/386294-386353",
"LUGM01000002.1/900415-900473",
"AP023034.1/433520-433579"
] | [
"ACUCAACCCAUGAAAGUAGACACCCCACCAUAAGGGGAUGAGCGAAAUCAUGGGUUUUUUG",
"AACUGAUCCAUGAGAGUAGGAACCCCAUCAUACGGGAAU-UUCGAAAUCAUGGGUUUUUUG",
"AAUCCACCUAUGAGAGUAGGAACCCCACCAUAUGGGGAU-UUCGAAAUCAUAGGUUUUUG-",
"AACUGAUCCAUGAGAGUAGGAACCCCAUCAUACGGGAAU-UUCGAAAUCAUGGGUUUUUUG"
] | rfam_14_5_mafft |
JN409597.1_1-137 | CAAGCAGCAACAAGAAAGUGCUUAGGCUUAAAUGCGUUUACCUAAGCGCUGAUACAAUGCUGCCAGAACAAUUUUAAAGCCAAGAACAGUUUAGUUUAGAGUAGUUUAUAAACUGAUCUACACGUGGCCUAACAUAU | ...((((((.......((((((((((..((((....)))))))))))))).......))))))...............((((.....((.((((((((..........)))))))).)).....))))......... | [
"JN409597.1/1-137",
"AFPP01033382.1/28875-29010",
"AFFF01008313.1/400637-400772"
] | [
"CAAGCAGCAACAAGAAAGUGCUUAGGCUUAAAUGCGUUUACCUAAGCGCUGAUACAAUGCUGCCAGAACAAUUUUAAAGCCAAGAACAGUUUAGUUUAGAGUAGUUUAUAAACUGAUCUACACGUGGCCUAACAUAU",
"AUGGCAGCAACAAGAAAGUGCUUAGG-UUGAUUGAAUUUAUUUAAGCGCUGAUACAAUGCUGCCAGAACAAUUUAAAAGCCAAGAACAGUUCAGUUUAAUGGAGUUUAUAAACUGGUCUACACGUGUCCUUACAUUC",
"UUGGCAGCAACAAGAAAGUGCUUGAG-UU... | rfam_14_5_mafft |
JNCF01000027.1_24159-24414 | GAGAAUGUUGUUAAAGGCAGCAUCAGCGUUAGGGCAUAAAUUAAUGCUAAAGUACUGGAAAACAAUCUUUUAAUAACCAUAGCGAUCUCCUCGGAUCCAAGGCCAUGAAUCAGCCACUUUUUUGUAUUUUUUUAUAAUGCAAUUUAAGUGCCAGCGGCUAAACUUUUAAGACAACCACUCUAACGGAUUAACCGCUUUUCCUUUUUGUCUUAUCUCAAAGUAUAGACCGUUUUGCUUGAUUCCACCGCUGUGACCG | (((((.((.(((((.(((.(.(((.(.(....(((((......))))).(((.(.(.......).)..)))..................).).))).)...))).(((((.((((..((....((((((................)))))).)).)))).)...))))(((.......)))......))))).)))))))..(((((........))))).....(.((...((........)).)).)....... | [
"JNCF01000027.1/24159-24414",
"AE017354.1/539616-539866"
] | [
"GAGAAUGUUGUUAAAGGCAGCAUCAGCGUUAGGGCAUAAAUUAAUGCUAAAGUACUGGAAAACAAUCUUUUAAUAACCAUAGCGAUCUCCUCGGAUCCAAGGCCAUG-AAUCAGCCACUUUUUUGUAUUUUUUUAUAAUGCAAUUUAAGUGCCAGCGGCUAAACUUUUAAGACAACCACUCUAACGGAUUAACCGCUUUUCCUUUUUGUCUUAUCUCAAAGUAUAGACCGUUUUGCUUGAUUCCACCGCUGUGACCG",
"GAAAACGCGGUCAAAGGCAGCAUCAGAGUUAGGGCAUAAACCAAUGCCAAAG... | rfam_14_5_mafft |
JPME01000020.1_396-258 | AAAAUCAGGAAUAACAAAGUAGUUAUUUCUUGAGUUAUGUUACUGAUAAGCAGGCAGAACUCAGAUUCCAUAUUAAUCAGCCCAUUUUUACUGGGUUAAUUGGUAUGUAAUCUGAGUUUUUUUUCUUGAAAGGAGUACA | .((.(.(((((((((......)))))))))..).)).(((..((..(...(((..((((((((((((.((((((.....(((((.......))))).....)))))).)))))))))))).....)))..)..)).))) | [
"JPME01000020.1/396-258",
"MAPZ01000020.1/22816-22936",
"CP002109.1/2214456-2214318",
"JPME01000037.1/1-98"
] | [
"AAAAUCAGGAAUAACAAAGUAGUUAUUUCUUGAGUUAUGUUACUGAUAAGCAGGCAGAACUCAGAUUCCAUAUUAAUCAGCCCA-UUUUUACUGGGUUAAUUGGUAUGUAAUCUGAGUUUUUUUUCUUGAAAGGAGUACA--",
"--AACUAGUGGUAACAAAGCAGUUACUACUUGAG-UAUGUUACUGAUAAGCAGGCAGAACUCAGAUUACGUAGAAAAUGUCC---UUUUUC-------------UACGUAGUCUGAGUUUUUUUUCUAGAAAGGAGUAUU--",
"-AAACCAGAAAUAACAAAG... | rfam_14_5_mafft |
JRKM01000001.1_1213986-1213865 | GCAACCUGAAGCUGGCGGCCGAGUACCCCAGCGUGUUCCGCUCGCUGCUGGGGAUUUCGUGGAUGUGGUUCUUUGGCGCGGUCUUCCUGUCGCAGUUCCCUGCGUUCGCCAAGGAGGUGCUG | .........(((.(..(((.((((((......)))))).)))..).))).((.((.((.(.((((.((..((.(((((.((....))))))).))..))...)))....).).)).)).)). | [
"JRKM01000001.1/1213986-1213865",
"CP000539.1/4119161-4119040",
"CP010951.1/1902359-1902238",
"CP000555.1/3947785-3947906"
] | [
"GCAACCUGAAGCUGGCGGCCGAGUACCCCAGCGUGUUCCGCUCGCUGCUGGGGAUUUCGUGGAUGUGGUUCUUUGGCGCGGUCUUCCUGUCGCAGUUCCCUGCGUUCGCCAAGGAGGUGCUG",
"GCAACCUGAAGCUGGCGCACGGCAACACCGUGGUGUUCCGCUCGCUGCUGGGCAUCUCGUGGAUGUGGUUCUUCGGCGCGGUGUUCCUGUCGCAGUUCCCCAGCUUCGCCAAGGACGUGCUG",
"GCAAUCUCAAGCUCGCGCACGGCAACGCGGUGGUGUUCCGCUCGCUGCUGGGCAUCAGC... | rfam_14_5_mafft |
JWZT01003725.1_9514-9429 | CGGCAUUCUGGCCUGAGCUGUAGAAGUAGCUGUAACUGUCGCCUAUCAUCUGGCUGAACAGCAGGUCCGGAUUCGGUUUGCCGCCA | .((((..((((((.((.((.............((..((........))..))...........)))).))..))))..)))).... | [
"JWZT01003725.1/9514-9429",
"CP000649.1/93894-93809"
] | [
"CGGCAUUCUGGCCUGAGCUGUAGAAGUAGCUGUAACUGUCGCCUAUCAUCUGGCUGAACAGCAGGUCCGGAUUCGGUUUGCCGCCA",
"CGGCGCUCUGUCCCGAGCUGUAGAAGUAAUUGUAGCUGUCGCCAAUCAUCUGGCUGAACAGCAGAUCGGGAUUAGGUUUGCCGCCA"
] | rfam_14_5_mafft |
JXKM01000007.1_155156-155413 | CUUUUUUACGCAUAAUAAACCACCUCUAUACAUUUUACUGUUCCUAUCCAAGUGGAAACAGGUAUAGAAAAACGUGUUAUGUAGUUUGUGAGUUCUUUUAAGAGCGCUAUUAUGCUUAUGAAUGUGAUAAAUCCAAUCUCAAAUAGAAAGGUCGCUGAUUUUAUUUACCCAUACAACUAUAUAAAAUUUAGUUAUGCUGCUAAAAAGUAGAUAAAAUUGGCGACUGAAUGGAGGUCACAGUCGCCAUGAAAAAGAUAC | .(.(..((..(.(((.(..........((((.((((.((((.(((.(..........).))).)))).)))).))))(............)....).))).).....))..).)............(((((..((((((.........))))...))..))))).....................................................(...((((.......))))...).................. | [
"JXKM01000007.1/155156-155413",
"CP019433.1/226380-226123"
] | [
"CUUUUUUACGCAUAAUAAACCACCUCUAUACAUUUUACUGUUCCUAUCCAAGUGGAAACAGGUAUAGAAAAACGUGUUAUGUAGUUUGUGAGUUCUUUUAAGAGCGCUAUUAUGCUUAUGAAUGUGAUAAAUCCAAUCUCAAAUAGAAAGGUCGCUGAUUUUAUUUACCCAUACAACUAUAUAAAAUUUAGUUAUGCUGCUAAAAAGUAGAUAAAAUUGGCGACUGAAUGGAGGUCACAGUCGCCAUGAAAAAGAUAC",
"CUUUUUUACGCAUAAUAAACCACCUCUAUACAUUUUACUGUUCCUAUCCAA... | rfam_14_5_mafft |
JXNU01000003.1_3715356-3715443 | GCCGUACACACUACACGUUCCUUGCUUCCAUGGGCUCGCGGCUGACCCUGACAGGAGGCUGAAUAAUCCGUAAGGAGCAAAUUCGAUG | ................(((((((((((((..(((...........))).....))))))............))))))).......... | [
"JXNU01000003.1/3715356-3715443",
"U00096.3/4425036-4425120",
"FN543502.1/3436271-3436355",
"CP000880.1/3147309-3147225",
"CP000783.1/183478-183563",
"CP001600.2/428412-428497",
"CP002038.1/3924123-3924038",
"CP011254.1/2336794-2336877",
"AL590842.1/3949426-3949340",
"JMPN01000019.1/92947-92862"
] | [
"-GCCGUACACACU-ACACGUUCCUUGCUUCCAUGGGCUCGCGGCUGACCCUGACAGGAGGCUGAAUAAUCCGUAAGGAGCAAAU--UCGAUG",
"-GCCGACCUUUAA--CACGUUCCUUGCCUCCCCGGGA-UUCGGCUGACCCAGACAGGAGGCUGAAUAAUCCGUAAGGAGC-AAU--UCGAUG",
"-GCCGACCUUUAA--CACGUUCCUUGCCUCCCCGGGC-CUCGGCUGACCCAGACAGGAGGCUGAAUAAUCCGUAAGGAGC-AAU--UCGAUG",
"-GCCGACCUUUAA--CACGUU... | rfam_14_5_mafft |
KB946316.1_1298052-1298174 | GAAGAACUGUAGGGACUACAGGGAUAGCCUAGGGCAUAUAAGAUAGAUAUAGCGUUUAGUCGAUCAUUUGUCUUUUUCUAGGAAAUUUCUAGUUAAAUAGAGAUAGUUCACUAAUUAUUAGUU | ......((((((...)))))).(((..(((((((...(((((.......(((...)))........)))))....))))))).........))).....(((....))).............. | [
"KB946316.1/1298052-1298174",
"MIJY01000010.1/22225-22104"
] | [
"GAAGAACUGUAGGGACUACAGGGAUAGCCUAGGGCAUAUAAGAUAGAUAUAGCGUUUAGUCGAUCAUUUGUCUUUUUCUAGGAAAUUUCUAGUUAAAUAGAGAUAGUUCACUAAUUAUUAGUU",
"AAAGAACUGUAGGGACUACAGGGUUAGCCUAGGGUAUAUAAGAUAGAUAUAGCGUUGAUUCGAUCAUUUGUCUUUUUCUAGGAAAUUUCUA-UUAAAUAGAAAUAGUUCACUAAUUAUUAGUU"
] | rfam_14_5_mafft |
KB946329.1_666494-666405 | AACCAAAAACAACCUUUUUAUUUUUCAUUUUACUCUUUUUAGAGUAAUUACUCCUUUUUCCAUCGGCCUAACCAACCGAUGGUUUUUUUA | .............................((((((......))))))............(((((((..(....).)))))))........ | [
"KB946329.1/666494-666405",
"MIJY01000023.1/316870-316956",
"AP012200.1/940440-940528",
"AE016830.1/1876680-1876594"
] | [
"AACCAAAAACAACCUUUUUAUUUUUCAUUUUACUCUUUUUAGAGUAAUUACUCCUUUUUCCAUCGGCCUAACCAACCGAUGGUUUUUUUA",
"UACCAACAACAACCUUUUUAUUUUUCAUUUUACUCU-UAUUGAGU-AAUACUCC-UUUUCCAUCGGUCAAUUAGGCCGGUGGUUUUUUUG",
"UACCAACAACAACCUUUUUAUUUUUCAAUUUACUCUGAAUAGGGUAAAUACUCC-UUUUCCACCGGUAAUUGAUACCGGUGGUUUUUUUG",
"UACCAACAACAACCUUUUUAUUUUUCA... | rfam_14_5_mafft |
KC836877.1_1151-1409 | UUGCUCGGCAACGGCCUGGUCUGUGCCAAGUGUUUGCUGACGCAACCCCCACUGGCUGGGGCUUGGCCAUAGGCCAUCAGCGCAUGCGUGGAACCUUUGUGGCUCCUCUGCCGAUCCAUACUGCGGAACUCCUAGCCGCUUGUUUUGCUCGCAGCCGGUCUGGAGCAAAGCUCAUCGGAACUGACAAUUCUGUCGUCCUCUCGCGGAAAUAUACAUCGUUUCCAUGGCUGCUAGGCUGUACUGCCAACUGGAUCCUUCG | (((((((((((..((.((((....)))).))..))))))).))))...((((..((..(.((((((((...)))))..))).)..)))))).........(((......)))((((((....((((.((.((((((.(((.(((((((((.(((.....)))))))))))).....(((..(((((....))))))))......((((((.......))))))..))).))))))..)).))))....))))))..... | [
"KC836877.1/1151-1409",
"M57663.2/1151-1409"
] | [
"UUGCUCGGCAACGGCCUGGUCUGUGCCAAGUGUUUGCUGACGCAACCCCCACUGGCUGGGGCUUGGCCAUAGGCCAUCAGCGCAUGCGUGGAACCUUUGUGGCUCCUCUGCCGAUCCAUACUGCGGAACUCCUAGCCGCUUGUUUUGCUCGCAGCCGGUCUGGAGCAAAGCUCAUCGGAACUGACAAUUCUGUCGUCCUCUCGCGGAAAUAUACAUCGUUUCCAUGGCUGCUAGGCUGUACUGCCAACUGGAUCCUUCG",
"UUGCCCGGCAACGGCCUGGUCUGUGCCAAGUGUUUGCUGACGCAACCCCC... | rfam_14_5_mafft |
KQ948217.1_277661-277529 | UUGGUGUUGCCACGCUGACGCGCCCCGUGGAAGGGAUCAGCGUGGUGAUGGUGGGCAAUCUCCGCCCUAGCCGGGGCGGCGUGUGCCGUUUGAGCGUUCGGCGUUCGGGAGUAGCCGCUCUCGGGCGCCGUCG | .(...((..(((((((((....((........))..)))))))))..)).((((.((....(((((((....)))))))....))))))....)....((((((((((((((....))))))))))))))... | [
"KQ948217.1/277661-277529",
"AL645882.2/7688336-7688466",
"FN554889.1/2480435-2480305",
"CP007574.1/7167097-7167224"
] | [
"UUGGUGUUGCCACGCUGACGCGCCCCGUG-GAAGGGAUCAGCGUGGUGAUGGUGGGCAAUCUCCGCCCUAGCCGGGGCGGCGUGUGCCGUUUGAGCGUUCGGCGUUCGGGAGUAGCCGCUCUCGGGCGCCGUCG",
"GCAGUGUUGCCACGUUGAUGCGCCCGUCG-GAAGGACUCAGCGUGGUGAUGGCGGGCAGUCGCCGCCCUUGCCGGGGCGG-UCAUGCCGCUU-AGCCUUCGGCGUCCGGGAGUUACCGCUCUCGGGCGCCGUCG",
"GCAGUGUUGCCACGCUGACGCGCCCCUUG-GAAGG... | rfam_14_5_mafft |
KX652377.1_10423-10479 | GCCCACGCAAGGGGAGGCAUCAUAUUGCCUCCGGGUGCUGACGACACCCCGUCCCCA | ....(((.....((((((........))))))(((((.......))))))))..... | [
"KX652377.1/10423-10479",
"HE574573.1/10278-10334",
"HE574574.1/10278-10334"
] | [
"GCCCACGCAAGGGGAGGCAUCAUAUUGCCUCCGGGUGCUGACGACACCCCGUCCCCA",
"GCCCACGCAAGGGGAGGCAUCAUUUCGCCUCCGGGUGCUGACGACACCCCGCCCCAG",
"GUCCACGCAAUGGGAGGCAUCAUUUCGCCUCCGGGUGCUGACUACUCCCCGUCCCCG"
] | rfam_14_5_mafft |
KX977552.1_1-152 | AGAAGUUCAUCUGUGUGAACUUAUUCCAAACAGCUUUUGGAGUAGUGCGUGUGAACGUAAACACAGUUUGAACGUUUUUUGGAUAGAGACAACUAUGUCUAACAAAAAACCAGGAAGACCCGGCUCAGGCCGGGUUGUCAAUAUGCUAAAGC | ....(((((.((((((...((.((((..((.....))..))))))(((((....))))).))))))..)))))((((((((.....((((......))))..))))))))...((.(((((((......))))))).))............. | [
"KX977552.1/1-152",
"MF380429.1/1-152"
] | [
"AGAAGUUCAUCUGUGUGAACUUAUUCCAAACAGCUUUUGGAGUAGUGCGUGUGAACGUAAACACAGUUUGAACGUUUUUUGGAUAGAGACAACUAUGUCUAACAAAAAACCAGGAAGACCCGGCUCAGGCCGGGUUGUCAAUAUGCUAAAGC",
"AGAAGUUCAUCUGUGUGAACUUUGUGAUUGACAGCUCAACACAAGUGCGGACUACCGUAAACACAGUUUGAACGUUUUUUGGAGAGAGACUACUAUGUCUAACAAAAAACCAGGAAAACCCGGGGCAACCCGGGUUGUCAAUAUGCUAAAGC"
] | rfam_14_5_mafft |
L77117.1_1659520-1659450 | GCCCCGGGAAACCGCGGGGGAUGAGCGACAGCCCGGCAAGCUGUGAGUCCCCUUUGCUCCCCCGGGGCACA | ((((((((.......(((((((..((....(((.)))..)).....))))))).......))))))))... | [
"L77117.1/1659520-1659450",
"CP001398.1/1107569-1107637",
"AP006878.1/899083-899151",
"AE009950.1/1865162-1865095"
] | [
"-GCCCCGGGAAACCGCGGGGGAUGAGCGACAGCCCGGCAAGCUGUGAGUCCCCUUUGCUCCCCCGGGGCACA",
"GCCCCCGGGAAACCGCGGGGGAUGAGCG---CUUCGGCGAGCUGUGAUUCCCCUUCGCUCCCCGGGGGCACA",
"GCCCCCGGGAAACCGCGGGGGAUGAGCG---CCUCGGCGAGCCGUGAUUCCCCUUCGCUCCCCGGGGGCACA",
"GCCCCCGGGAAACCGCGGCGGGGGAGCG----AGCGGCGAGCUGUGAGCCCGCUUCGCUCCCCGGGGGUACA"
] | rfam_14_5_mafft |
LJSK01000184.1_20806-20724 | GUGAAUGAUGAUGCGUGUAUUCUGCAAUGCUGACCUGUCUGACGAGAAGCAAUACUACUACUAUGACUAUUGGCAUCUGACAC | .........(((((......((.((...)).))(.(.((....)).).)(((((.............))))))))))...... | [
"LJSK01000184.1/20806-20724",
"FR796419.1/39898-39980",
"FR798998.1/40159-40241"
] | [
"GUGAAUGAUGAUGCGUGUAUUCUGCAAUGCUGACCUGUCUGACGAGAAGCAAUACUACUACUAUGACUAUUGGCAUCUGACAC",
"GUGAAUGAUGAUGCAUGUAUUCUGCAAUGCGGACUCCACUGACGAGGAACAAUACUACUACUAUGACUAUUGGCAUCUGACGC",
"GUAAAUGAUGAUGCGUGUAUUCUGCAAUGCGGACCCCACUGACGAGGAUCAAUACUACUACAAUGACUAUUGGCAUCUGACCA"
] | rfam_14_5_mafft |
LNYW01000033.1_171156-171237 | AGACAGCGCUAUCGCGCUUCCUCAGCCCGAACGGCAUCGAAGUAACGACUGGCUCAAACAACUUUCUUAUCCAUAACUCACG | .((.(((((....)))))))...((((.(.......(...).......).))))............................ | [
"LNYW01000033.1/171156-171237",
"LNYW01000074.1/103952-104033",
"LNYW01000020.1/21047-21128"
] | [
"AGACAGCGCUAUCGCGCUUCCUCAGCCCGAACGGCAUCGAAGUAACGACUGGCUCAAACAACUUUCUUAUCCAUAACUCACG",
"AGACAGCGCUGUCGCGCCUCCUCAGCCCGAACGGCAUCGAAGUAAUGACCGGCUCAAACAACUUUCUUAUCCGAAACUCACG",
"AGACAGCGCUAUCGCGCUUCCUCAGCCCGAACGGCAUCGAAGUAACGACAAGAUCAAACAAGCUUCUUAUCCGAAACUCACG"
] | rfam_14_5_mafft |
LUGM01000002.1_960931-960827 | AAUCAUAUGCUAUAUUAAGAAUGUAGUUAAUACUAACUACUAGUCUUUUAUAUUCAUGAACAUAUUACUCUUUGAGAGCGACACAUCAGUGUCGCUCUUUUUUUU | ..(((..((......(((((..(((((((....))))))).....)))))....)))))................((((((((......))))))))........ | [
"LUGM01000002.1/960931-960827",
"AP008934.1/2423050-2423151",
"LNPF01000016.1/396663-396565"
] | [
"AAUCAUAUGCUAUAUUAAGAAUGUAGUU-AAUACUAACUACUAGUCUUUUAUAUUCAUGAACAUAUUACUCUUUGAGAGCGACACAUCAGUGUCGCUCUUUUUUUU",
"--AGAUAUGAUAUAUUAAAGGUGUAGUUGGAAACCGACUACUAGUCUUUUAUAUUCAUGAACAUAUUACUCUU--AAGGCGACACGGAUGUGUCGUCUUUUUUUAU",
"----AAUUGUUAUAUUAUAGAUGUAGUUGAAAAUCAACUACUAGUCUUUUAUAUUCAUGAACAUAUUACUCUU---AGGCGACACAAAUGU... | rfam_14_5_mafft |
MF139576.1_10524-10619 | UGCAGUCAGGCCUCAAGACAUUGAGCCACCGGAUGGGACUAGACGGUGCUGCCUGCGCGUCCCCCCCUUUGAUCAAGCUAGAUGGUCAGUAGGGGU | ..(......(.((((......)))).)....)..(((........((((.....))))..)))................................. | [
"MF139576.1/10524-10619",
"NC_016997.1/10471-10566"
] | [
"UGCAGUCAGGCCUCAAGACAUUGAGCCACCGGAUGGGACUAGACGGUGCUGCCUGCGCGUCCCCCCCUUUGAUCAAGCUAGAUGGUCAGUAGGGGU",
"UGCAGUCAGGCCUCACGAAUGUGAGCCACCGGAUGGGACUAGACGGUGCUGCCUGCGCGUCCCCCCACGCAAUCAAGCUAGAUGGUUGUCAUGGGC"
] | rfam_14_5_mafft |
MF139576.1_10747-10844 | UAGGAAAGACUGGAGAUACCUUUGGUUCUUCGACAUUAACUCCAAUCGGCACAGAGCGCCGUGGGAAACGGAGUUAAUAUGGAAAAAACAUAAGUAUC | ...............((((.(.((.((.((((....(((((((....(((.......))).........)))))).)..)).)).)).)).).)))). | [
"MF139576.1/10747-10844",
"NC_016997.1/10693-10790"
] | [
"UAGGAAAGACUGGAGAUACCUUUGGUUCUUCGACAUUAACUCCAAUCGGCACAGAGCGCCGUGGGAAACGGAGUUAAUAUGGAAAAAACAUAAGUAUC",
"UAGGAAAGACUGGAGAUACCUUUGGUUCUUCGACACUAACUCCUAAUGGCACAGAGCGCCAUAAGAAACGGAGUUAGUAUGGAAAAAACAUAAGUAUC"
] | rfam_14_5_mafft |
MF582366.1_10276-10333 | GCCCACGCUAGGGGGUAGAGUAGACUCAUCUCCGGGUGUUGACGACACCCCGACCCCA | .....((.....(((.(...........).)))((((((.....))))))))...... | [
"MF582366.1/10276-10333",
"MF582365.1/10276-10333"
] | [
"GCCCACGCUAGGGGGUAGAGUAGACUCAUCUCCGGGUGUUGACGACACCCCGACCCCA",
"GCCCACGCAAGGGGAGAGAAGAUUUUCGCCUCCGGGUGUUGACGACACCCCGACCCCA"
] | rfam_14_5_mafft |
MNRC01000346.1_5084-5321 | CUUUUUUACGCAUAUGUAAUCACCUCACUACAUUUUACUGUUCCUGUUGAUUUUCUAACAGGUAUAGAAAAACGCAUAGUAUGGUUUGUAAGUUCCUAUCUGCGUAAAAGGAACAUUAAAAAAGUGCUGCAUUGCGGUAAAUAAAAAAAACCGCUAUUGUCAGUAGCAUUUUUGCAUGUUAAAAAUUUUCUUUGUUUAGAUGGCGGUUGACAAGCCGCCUUUUUUCCAUCCCCGAAAA | ((((..((..(..(((............(.(.((((.((((.(((((((......))))))).)))).)))).).)..(((.....))).......)))..)..)).)))).............(((((((..((((.............))))...)).)))))................................(((.(.(((((....))))).).)))............... | [
"MNRC01000346.1/5084-5321",
"DS264285.1/97081-96846",
"MNRE01000078.1/16408-16642",
"MNRD01000115.1/2449-2213",
"FP929061.1/407509-407745"
] | [
"CUUUUUUACGCAUAUGUAAUCACCUCACUACAUUUUACUGUUCCUGUUGAUUUUCUAACAGGUAUAGAAAAACGCAUAGUAUGGUUUGUAAGUUCCUAUC-UGCGUAAAAGGAACAUUAAAAAAGUGCUGCAUUGCGGUAAAUAAAAAAAACCGCUAUUGUCAGUAGCAUUUUUGCAUGUUAAAAAUUUUCUUUGUUUAGAUGGCGG-UUGA---CAAGCCGCCUUUUUUCCAUCCCCGAAAA--",
"CUUUUUUACGCAUAUUUAAUCACCUCACUACAUUUUACUGUUCCUGUUGAUUUUCUAACAGGUA... | rfam_14_5_mafft |
MRAE01000032.1_24087-24181 | AAAGCUGAAGAAGAAGUCAAUAUAGAGGAAGAGAGAAGACUUUUUUAUGUAGGUAUUACAAGGGCAAAAGAAAAUUUGUAUUUAACUGUCCCAAA | ...(.(..........(..(.....(((...........))).....)..)(((...(.(..((...........)).).)...))))..).... | [
"MRAE01000032.1/24087-24181",
"MRAE01000012.1/31585-31679",
"AM412317.1/1551056-1551150",
"AM412317.1/1543024-1543118"
] | [
"AAAGCUGAAGAAGAAGUCAAUAUAGAGGAAGAGAGAAGACUUUUUUAUGUAGGUAUUACAAGGGCAAAAGAAAAUUUGUAUUUAACUGUCCCAAA",
"AAAGCUGAAGAAGAAGUCAAUAUAGAGGAAGAGAGAAGACUUUUUUAUGUAGGUAUUACAAGGGCAAAAGAAAAUUUGUAUUUAACUGUCCCAAA",
"AAAGCAGAUGAGGAAGUUAAUAUAGAGGAAGAGAGAAGACUUUUUUAUGUAGGUAUCACAAGGGCAAAAGAAAAUUUAUAUUUAACUGUACCAAA",
"AAAGCAGAUGAA... | rfam_14_5_mafft |
NC_001451.1_1-200 | ACUUAAGAUAGAUAUUAAUAUAUAUCUAUUACACUAGCCUUGCGCUAGAUUUUUAACUUAACAAAACGGACUUAAAUACCUACAGCUGGUCCUCAUAGGUGUUCCAUUGCAGUGCACUUUAGUGCCCUGGAUGGCACCUGGCCACCUGUCAGGUUUUUGUUAUUAAAAUCUUAUUGUUGCUGGUAUCACUGCUUGUUUUG | ......(((((((((......)))))))))..((((((..............((.............))....(((.((((((((.(((((.....(((((((..(((.(((.((((....)))).)))))))))))))))))).)))).))))))).....................))))))................ | [
"NC_001451.1/1-200",
"NC_010800.1/1-200"
] | [
"ACUUAAGAUAGAUAUUAAUAUAUAUCUAUUACACUAGCCUUGCGCUAGAUUUUUAACUUAACAAAACGGACUUAAAUACCUACAGCUGGUCCUCAUAGGUGUUCCAUUGCAGUGCACUUUAGUGCCCUGGAUGGCACCUGGCCACCUGUCAGGUUUUUGUUAUUAAAAUCUUAUUGUUGCUGGUAUCACUGCUUGUUUUG",
"ACUUAAGAUAGAUAUUAAUAUAUAUCUAUCAUACUAGCCUUGUGCUAGAUUUCCAACUUAACAAAACGGACUUAAAUACCUACAGCUGGUCCUCAUAGGUGUUCCAUUG... | rfam_14_5_mafft |
NC_001672.1_10910-10954 | CCCCUGCAUCAUGAUAAGGCCGAACAUGGUGCAUGAAAGGGGAGG | ((((.((((((((...........))))))))......))))... | [
"NC_001672.1/10910-10954",
"NC_027709.1/10639-10683",
"NC_001809.1/10640-10683",
"NC_005062.1/10557-10599"
] | [
"CCCCUGCAUCAUGAUAAGGCCGAACAUGGUGCAUGAAAGGGGAGG",
"CCCCCGCACCAUGACAAGGCCGAACAUGGUGCACCAAAGGGGAGG",
"CCCCCGCCCCAUGACAAGGCCGAACAUGGAGCAUUAAAGGGAGG-",
"CCCCCGCACCAUGG-AAGGCCAAACAUGGUGCAUGAAGGGAAAG-"
] | rfam_14_5_mafft |
NC_001846.1_1-300 | UAUAAGAGUGAUUGGCGUCCGUACGUACCCUCUCAACUCUAAAACUCUUGUAGUUUAAAUCUAAUCUAAACUUUAUAAACGGCACUUCCUGCGUGUCCAUGCCCGCGGGCCUGGUCUUGUCAUAGUGCUGACAUUUGUAGUUCCUUGACUUUCGUUCUCUGCCAGUGACGUGUCCAUUCGGCGCCAGCAGCCCACCCAUAGGUUGCAUAAUGGCAAAGAUGGGCAAAUACGGUCUCGGCUUCAAAUGGGCCCCAGAAUUUCCAUGGAUGCUUCCGAACGCAUCGGAGAAGUUGGGUAACC | .....(((.(.(..(........)..)..).))).......(((((.....))))).........................(((((....((..(.(((.(((....))).))).)..))...)))))...........................................(.(........).).........((...(..........)))..............(..((((.((........))))))..).............................................. | [
"NC_001846.1/1-300",
"AC_000192.1/1-300",
"NC_012936.1/1-267"
] | [
"UAUAAGAGUGAUUGGCGUCCGUACGUACCCUCUCAACUCUAAAACUCUUGUAGUUUA-----AAUCUAAUCUAAACUUUAUAAACGGCACUUCCUGCGUGUCCAUGCCCGCGGGCCUGGUCUUGUCAUAGUGCUGACAUUUGUAGUUCCUUGACUUUCGUUCUCUGCCAGUGACGUGUCCAUUCGGCGCCAGCAGCCCACCCAUAGGUUGCAUAAUGGCAAAGAUGGGCAAAUACGGUCUCGGCUUCAAAUGGGCCCCAGAAUUUCCAUGGAUGCUUCCGAACGCAUCGGAGAAGUUGGGUAACC",
"UAUA... | rfam_14_5_mafft |
NC_003045.1_30698-31026 | AAGAUGGAUGAGCCCUUUACUGAAGACACCUCAGAAAUAUAAGAGAAUGAACCUUAUGUCGGCACCUGGUGGUAACCCCUCGCAGGAAAGUCGGGAUAAGGCACUCUCUAUCAGAAUGGAUGUCUUGCUGCUAUAAUAGAUAGAGAAGGUUAUAGCAGACUAUAGAUUAAUUAGUUGAAAGUUUUGUGUGGUAAUGUAUAGUGUUGGAGAAAGUGAAAGACUUGCGGAAGUAAUUGCCGACAAGUGCCCAAGGGGAAGAGCCAGCAUGUUAAGUUACCAUCCAGUAAUUAGUAAAUGAAUGAAGUUAAUUAUGGCCAAUU... | .........................................(((((.((..((((((.((((..((((..((......))..))))....)))).)))))))).)))))..........((.((((.((((((((((...........))))))))))......((((((((..(((..((..(((..............(((((((............((((((((.........))).))))).(((...))).....)))))))..............)))...))..)))........))))))))....((....... | [
"NC_003045.1/30698-31026",
"NC_006213.1/30411-30713",
"NC_026011.1/30919-31234"
] | [
"AAGAUGGAUGAGCCCUUUACUGAAGACACCUCAGAAAUAUAAGAGAAUGAACCUUAUGUCGGCACCUGGUGG-UAACCCCUCGCAGGAAAGUCGGGAUAAGGCACUCUCUAUCAGAAUGGAUGUCUUGCUGCUAUAAUAGAUAGAGAAGGUUAUAGCAGACUAUAGAUUAAUUAGUUGAAAGUUUUGUGUGGUAAUGUAUAGUGUUGGAGAAAGUGAAAGACUUGCGGAAGUAAUUGCCGACAAGUGCCCAAGGGGAAGAGCCAGCAUGUUAAGUUACCAUCCAGUAAUUAGUAAAUGAAUGAAGUUAAUUAUGG... | rfam_14_5_mafft |
NC_003687.1_10734-10839 | UCCCCCAGGAAACUGGGGGGGCGGUUCUUGUUCUCCCUGAGCCACCACCAUCCAGGCACAGAUAGCCUGACAAGGAGAUGGUGUGUGACUCGGAAAAACACCCGCU | .(((((((....)))))))(((((....((((....(((((.(((((((((((((((.......))))).......))))))).))).)))))...)))).))))) | [
"NC_003687.1/10734-10839",
"NC_001809.1/10766-10871",
"NC_027709.1/10765-10870",
"NC_001672.1/11036-11141",
"NC_003690.1/10838-10943",
"NC_005062.1/10682-10787",
"AF311056.1/10715-10800"
] | [
"UCCCCCAGGAAACUGGGGGGGCGGUUCUUGUUCUCCCUGAGCCACCACCAUCCAGGCACAGAUAGCCUGACAAGGAGAUGGUGUGUGACUCGGAAAAACACCCGCU",
"UCCCCCUCGACAGAGGGGGGGCGGUUCUUGUUCUCCCUGAGCCACCAUCACCCAGACACAGAUAGUCUGACAAGGAGGUGAUGUGUGACUCGGAAAAACACCCGCU",
"UCCCCCUCGACAGAGGGGGGGCGGUUCUUGUUCUCCCUGAGCCACCAUCACCCAGACACAGAUAGUCUGACAAGGAGGUGAUGCGUGACUC... | rfam_14_5_mafft |
NC_004355.1_10531-10570 | CAAAGCCUCCCAGAGAGGGCCGAACUGGGAGGUUAUGAAG | ((...((((((((...........))))))))...))... | [
"NC_004355.1/10531-10570",
"HM055369.1/10547-10586"
] | [
"CAAAGCCUCCCAGAGAGGGCCGAACUGGGAGGUUAUGAAG",
"CAAAACCUCCCAGAGAAGGCCGAACUGGGAGGCCAUGAAG"
] | rfam_14_5_mafft |
NC_005064.1_11282-11367 | CCUCCGUAAUGUGAAAAAGUAUGGGGAAAAGAACCCAGCUAAAUCUCCCACCGAUAGGGAGUUUGGACUAUCUUUUCUAUACCAUA | ...................((((.(((.((((......(((((.(((((.......))))))))))....)))).)))....)))) | [
"NC_005064.1/11282-11367",
"NC_001564.2/10593-10677",
"NC_012932.1/10972-11057"
] | [
"CCUCCGUAAUGUGAAAAAGUAUGGGGAAAAGAACCCAGCUAAAUCUCCCACCGAUAGGGAGUUUGGACUAUCUUUUCUAUACCAUA",
"CUCCGUUAAUGUGAAAAAGUAUGGGG-AAAGAACUCAUCUUAACCUCCCACCGUUAGGGAGUUUUGAUUAUCUUUUCUAUACCAUA",
"CCUCCGAAAUGUGAAAAAUUAUGGGGAAAAGUACCCAUCUAAGCCUCCCACCGUUAGGGAGUUUGGAAUACCUUUUCUAUACCAUA"
] | rfam_14_5_mafft |
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