id stringlengths 12 30 | sequence stringlengths 12 4.38k | secondary_structure stringlengths 12 4.38k | aligned_ids listlengths 1 10 | aligned_sequences listlengths 1 10 | split stringclasses 4
values |
|---|---|---|---|---|---|
ADJS01001306.1_1758-1671 | ACAGUACAAACUGAACAGGCCGGAUAUCUUAUCUGGGGCCGGGUCACAACGUGACAGUGGAAUGAAUUGUUUUAUCCGCGGGACAGUA | .........((((.....((((((((...)))))..)))...(((((...))))).(((((.............)))))....)))). | [
"ADJS01001306.1/1758-1671",
"FP929055.1/2372574-2372659"
] | [
"ACAGUACAAACUGAACAGGCCG-GAUAUCUUAUC-UGGGGCCGGGUCACA-ACGUGACAGUGGAAUGAAUUGUUUUAUCCGCGGGACAGUA",
"ACAGUACAAACUGAGCAGACCGUGAUAUCAUAUCAUGGAGUCGGGUCGCAGAUGCGACAGUGGAA-----UCUUUCAUCCGCGGGACAGUA"
] | rfam_14_5_mafft |
ADJS01006913.1_2727-2603 | GCAGUACAAACUGAUCAGGCUACAUUCAUUUUCAAAAAGAUGAUGUUAAGAAAAUGGUGUGCAUGCCGGGCCGGUCAAUUACCGGCAGCAGAUGAGACGAUGAUUCAUACAUCUGUGGGACAGUA | .........((((.....((.(((((.............................)))))....))...(((((.......))))).(((((...................)))))....)))). | [
"ADJS01006913.1/2727-2603",
"AAXB02000001.1/302330-302454"
] | [
"GCAGUACAAACUGAUCAGGCUACAUUCAUUUUCAAAAAGAUGAUGUUAAGAAAAUGGUGUGCAUGCCGGGCCGGUCAAUUACCGGCAGCAGAUGAGACGAUGAUUCAUACAUCUGUGGGACAGUA",
"GCAGUACAAACUGAUCAGGCUACAUUCAUUUUCAAAAAGAUGAUGUUAAGAAAAUGGUGUGCAUGCCGGGCCGGUCAAUUACCGGCAGCAGAUGAGACGAUGAUUCAUACAUCUGUGGGACAGUA"
] | rfam_14_5_mafft |
ADJS01012726.1_612-517 | GAGCAACUUAGGAUUUUAGGCUCCACCGCGGCUUGCUGCGGUGCAAACCCCGCAAGCCUGGCGGUCUUGCGCGCGGUCAAAAUCUAUCCGCCGGAG | ..........(((((((......(((((((((..)))))))))...(((.((((((.........))))))...))).)))))))........... | [
"ADJS01012726.1/612-517",
"ACBY02000013.1/114529-114434",
"BAAU01020333.1/1-83",
"ADJT01007369.1/6381-6474",
"ADJS01013861.1/2134-2227"
] | [
"GAGCAACUUAGGAUUUUAGGCUCCACCGCGGCUUGCU-----GCGGUGCAAACCC-CGCAAGCCUGGCGGUCUUGCGCGCGGUCAAAAUCUAUCCGCCGGAG",
"GAGCAACUUAGGAUUUUAGGCUCCGCCGCAGC-UUCC-----GCGGCGCAAACCGGUGUCAGGCUGGCGGUCUGGCAUGCGGUCAAAAUCUAUCCGCCGGAG",
"------------------GGCUCCGCUGUCGGCUGCUGGUCGGCAGCGCAAACCC-CGCAAGGCUGGCGGUCUUGCGUGUGGUCAAAAUCUAUCCGCCG... | rfam_14_5_mafft |
ADJT01005907.1_1108-1187 | UCCGCUCGAAACUUUGCACACCUCUACGCGGUGGGCGGCAGGCAACACAGUGUGUAGAUGCUGUGGCAAAGAAUGCAAGA | .((((((............(((.......))))))))).......(((((..........)))))............... | [
"ADJT01005907.1/1108-1187",
"ADJT01005972.1/8134-8204",
"BAAV01013885.1/1004-1077",
"ABED02000029.1/678005-678077",
"BABG01004747.1/841-765",
"BAAX01015505.1/392-316",
"FP929046.1/1977588-1977663",
"AECU01000025.1/2611-2539",
"FP929046.1/261862-261939"
] | [
"UCCGCUCGAAACUUUGCACACCUCUACGCGGUGGGCGGCAGGCAACACAGUGUGUAGAUGCUGUGGCAAAGAAUGCAAGA",
"GCCGCUCGAAACUUUGCACACCUCUACGUGGUGGGCGGCAGGCAACACAG--------UGAUGUGGCUAAG-AUGCGGAG",
"GCUGCUCGAAACUUUGCACACCUCUUCGUGGUGAGCAGCAGGCAACACAU------GAGAAUGUGGCGAAGAAUGCAAAG",
"GCCGCUCGAAACUUUGCACACCUCUACGCGGUGGGUGGCAGGCAACACAU------G... | rfam_14_5_mafft |
ADJT01006171.1_2802-2854 | CCGGAUAUUUUGGCAGGGCUGCACCGGGCAAAGCAACCCCGCCCCAUCUUCCC | ((((........[..[[[.[[[.)))).....]]].]]]..]........... | [
"ADJT01006171.1/2802-2854",
"ADJT01006171.1/168-220",
"BAAU01002956.1/2266-2318",
"FP929046.1/2710691-2710641"
] | [
"CCGGAUAUUUUGGCAGGGCUGCACCGGGCAAAGCAACCCCGCCCCAUCUUCCC",
"CCGGAUAUUUUGGCAGGGCUGCACCGGGCAAAGCAACCCCGCCCCACUACCCC",
"CCGGAAACUUUAGCAGGGCUGCACCGGGCAAAGCAACCCCGCCCCACUACCCC",
"CCGGACACCUUAGCAGGGCCGCACC--GUAAAGCGACCCCGCCCCACUACCCC"
] | rfam_14_5_mafft |
ADTP01000150.1_17338-17239 | AACCUUUAGUUGGUUAAUGUUACACCAACAACGAAACCAACACGCCAGGCUUAUUCCUGUGGAGUUAAAUAUGAGCGAUAAAAUUAUUCACCUGACUGAC | ........((((.(((...(.((.(((...(.(......................).).))).)).)....))).))))....(((.((....)).))). | [
"ADTP01000150.1/17338-17239",
"CP000950.1/4451980-4451893",
"FR729477.2/3480769-3480856",
"CP002773.1/142447-142535",
"CP002505.1/4659880-4659794",
"CP000826.1/179615-179702",
"CP001657.1/4529000-4528913"
] | [
"AACCUUUAGUUGGUUAAUGUUACACCAACAACGAAACCAACACGCCAGGCUUA-UUCCUGUGGAGUUAAAUAUGAGCGAUAAAAUUAUUCACCUGACUGAC",
"AUCCUACUGUUGGUUAAUGCUACACCAACGA------------GGUAGACACA-AUCCUUUGGAGUAGAACAUGAGCGAUAAAAUUAUUCACCUGAGUGAC",
"AUCCUAUUGUUGGUUAAUGCUACACCAACGA------------GGUAGACACA-AUCCUUUGGAGUAGAACAUGAGCGAUAAAAUUAUUCACCUGAGUGAC... | rfam_14_5_mafft |
ADUU01000026.1_72568-72504 | UUUUUACGCCUCAAACUUUCGUUUUCGGGUCAUUUCGUCCAGACUUAAGUUCACAACACCUCACC | .............(((((..((((..(((.(.....))))))))..))))).............. | [
"ADUU01000026.1/72568-72504",
"U00096.2/3154543-3154606",
"AEJY01000042.1/60378-60441",
"AEJZ01000135.1/15562-15499"
] | [
"UUUUUACGCCUCAAACUUUCGUUUUCGGGUCAUUUCGUCCAGACUUAAGUUCACAACACCUCACC",
"UUUUUACGCCUCAAACUUUCGUUUUCGGG-CAUUUCGUCCAGACUUAAGUUCACAACACCUCACC",
"UUUUUACGCCUCAAACUUUCGUUUUUGGG-CAUUUCGUCCAGACUUAAGUUCACAACACCUCACC",
"UUUUUCCUCCUCAAACUUUCGUUUUUGGG-UAUUUCGUCCAGACUUAAGUUCACACCAACUCACC"
] | rfam_14_5_mafft |
AE002098.2_1975310-1975382 | AAAUGUUUAUAUAUUAUCUAUUCUGCGUAUGACUAGGAGUAAACCUGUGAAUCGAACUGCCUUCUGCUGCCUU | .(((((....))))).........(((((.((..((((((...............))).)))))))).))... | [
"AE002098.2/1975310-1975382",
"AE004969.1/29881-29809"
] | [
"AAAUGUUUAUAUAUUAUCUAUUCUGCGUAUGACUAGGAGUAAACCUGUGAAUCGAACUGCCUUCUGCUGCCUU",
"AAACGUUUAUAUAUUAUCUAUUCUGUGUAUGACUAGGAGUAAACCUGUGAACCGAACUACCUUCUGCUGCCUU"
] | rfam_14_5_mafft |
AE002098.2_2021833-2022018 | CAACGUGCAAAAAAAACCAUUCAUACCAAGGGUAAGUAUGAAUGGUCAAUACAUUGCGGGAAAACGUCUUACUUGCUGCACUGCCGAAAAGGGAGAAACGGCAGCGGUAAUCAGCGGAAAGGAUUGUACCCGAAUUAAUAUUAAGAAACGUUAAUCGCGAAAAUAUAUUAACAAACCUGUUGAAAC | ...((((........(((((((((((.........)))))))))))..........((((...(((((((..(((((((.((((((............)))))).).....))))))..)))).))).)))).((((((.((....)).))))))))))........((((((....))))))... | [
"AE002098.2/2021833-2022018",
"AE004969.1/2138417-2138232"
] | [
"CAACGUGCAAAAAAAACCAUUCAUACCAAGGGUAAGUAUGAAUGGUCAAUACAUUGCGGGAAAACGUCUUACUUGCUGCACUGCCGAAAAGGGAGAAACGGCAGCGGUAAUCAGCGGAAAGGAUUGUACCCGAAUUAAUAUUAAGAAACGUUAAUCGCGAAAAUAUAUUAACAAACCUGU-UGAAAC",
"CAACGCGCAAAAAAAACCAUUCAUACCAAGGGUAAGUAUGAAUGGUCAAUACAUUGCGGGAAAACAUCUUACUUGCUGCACUGCCGAAAAGGGAGAAACGGCAGCGUUAACCAGC-AAAAGC... | rfam_14_5_mafft |
AE004091.2_5775397-5775632 | AACGAAGAUUUCGGGGGCCUCGGUACAGGCAGGCUGGGGAAUCCCCUCUUUUACACCCGGCGGCAGACGCAGCAUCCGCGCGCAACCGCCACACCCGUUUCGGGGACCUCGGUACAGGCAGGCUGAGAACUCCCCUCUUUUAUGCCCGGCGGUAGCGCAGCGAUCCGCGCCUCCGCCCUCCCGUUUGGGGACCUCGGUACAGGCAGGCUGAGAAUUCCCCCUUUUAUUCCCGGCCG | ............((((((((((((........)))))))..)))))............(((((....(((.((....)))))...)))))...........(((((.((((((........))))))...)))))............(((((..((((........))))..))))).........(((((.((((((........))))))...)))))................ | [
"AE004091.2/5775397-5775632",
"CP000744.1/6057924-6058154"
] | [
"AACGAAGAUUUCGGGGGCCUCGGUACAGGCAGGCUGGGGAAUCCCCUCUUUUACACCCGGCGGCAGACGCAGCAUCCGCGCGCAACCGCCACACCCGUUUCGGGGACCUCGGUACAGGCAGGCUGAGAACUCCCCUCUUUUAUGCCCGGCGGUAGCGCAGCGAUCCGCGCCUCCGCCCUCCCGUUUGGGGACCUCGGUACAGGCAGGCUGAGAAUUCCCCCUUUUAUUCCCGGCCG",
"AACGACGAUUUCGGGGGCCUCGGUACAGGCAGGCUGGGGAAUCCCCCCUUUUACACCCGGCGGCAGGCGCAGC... | rfam_14_5_mafft |
AE004437.1_1988005-1987819 | AUUACCGGACUCACAAAACCCAACCACAAGUUCGGUUGGUGCGUCUGUCCGGGUCGGGGCGCGUAAGCCGCCCAACCUCAUCCCGUUCCCUCGCGGAACAGGGAGUGUUAGCGCACGGCUGAGGGAACUACAAAAGCCUCGGGCCAUCGUGCCCGAGGCUGUUUACUCCGUUCUCGCGGGGGGUUCG | ....((((((..((.....((((((........))))))...))..))))))((..((((((....).))))).)).......((.(((((((((((((..(((((((((((.....)))))............((((((((((......))))))))))...)))))))))).)))))))))..)) | [
"AE004437.1/1988005-1987819",
"AGFZ01000059.1/64264-64449"
] | [
"AUUACCGGACUCACAAAACCCAACCACAAGUUCGGUUGGUGCGUCUGUCCGGGUCGGGGCGCGUAAGCCGCCCAACCUCAUCCCGUUCCCUCGCGGAACAGGGAGUGUUAGCGCACGGCUGAGGGAACUACAAAAGCCUCGGGCCAUCGUGCCCGAGGCUGUUUACUCCGUUCUCGCGGGGGGUUCG",
"AUUACCGGACUCACAAAACCCAGCCGCAAGUGCGGUUGGUGCGUCUGUCCGGGUCGGGGCGUGUAAACCGCCCAACCUCAUCCCGCUCGCUUGCCGAGCAGGGAGUACUAGCGUACGGCUGA... | rfam_14_5_mafft |
AE004437.1_34775-34602 | ACGUAUCUCCGAGUCCCGUCACGGAUGGCGGUGAUAGGAGUAACGGCUGGUUGGCACAGCCAUCGACGUUCCUGUUUGACAAUGAAACUGGUGCGUUCGCACCUCAAGAACAGGCUACGUCGUAAACCAUAAUAUCCCAACGCGGUCGGGAAUCCUCGCCCUUCAGGGCGGGGA | ..((..((((..(((((((((....)))))).))).))))..))(((((.......)))))..((((((.(((((((............(((((....)))))....)))))))..))))))............((((.((...)).)))).(((((((((....))))))))) | [
"AE004437.1/34775-34602",
"CP001934.1/14952-15125"
] | [
"ACGUAUCUCCGAGUCCCGUCACGGAUGGCGGUGAUAGGAGUAACGGCUGGUUGGCACAGCCAUCGACGUUCCUGUUUGACAAUGAAACUGGUGCGUUCGCACCUCAAGAACAGGCUACGUCGUAAACCAUAAUAUCCCAACGCGGUCGGGAAUCCUCGCCCUUCAGGGCGGGGA",
"AAGUAUCUCCGAGUCCCGCCACGGAUGGGGGCGAUAGGAGUAACGGCUGGUUGGCACAGCCAUCGACGUUCCUGUUUGACAAGGAAACUGGCGUGUUCGCGCCUCAAGAACAGGUCACGUCGUAAACCACAAUAU... | rfam_14_5_mafft |
AE004439.1_1243932-1244013 | GCAACUUGCAGUUGUUUUUAAUAAAAUUGGUUCCUUAGGUUAUUCACCACCCAUCUUGGGUGGUGUUUUUUUUUUAGCAUGU | ((((((...)))))).............................((((((((.....))))))))................. | [
"AE004439.1/1243932-1244013",
"FJ664182.1/115-195",
"CP001733.1/168302-168381",
"ADOB01000043.1/29897-29818",
"CP001607.1/1899801-1899722",
"L42023.1/509202-509121"
] | [
"GCAACUUGCAGUUGUUUUUAAUAAAAUUGGUUCCUUAGGUUAUUCACCACCCAUCUUGGGUGGUGUU-UUUUUUUUAGCAUGU-",
"GCAACUUGCAGUUG-UUUUAAUAAAAUUGGUUCCUUAGGUUAUUUGCCUCUC--UUCGUGAGAGGCAUUUUUUUUAUGUAUUUU",
"GCAACUUGCAGUUG-UUUUAAUAAAAUUGGUUCCUUAGGUUAUUUGCCUCUC--UUCGUGAGAGGCA-UUUUUUUAUGUAUUUU",
"GCAACUUGCAGUUG-UUUUAAUAAAAUUGGUUCCUUAGGUUAUUU... | rfam_14_5_mafft |
AE004439.1_147426-147558 | ACAUCUGUUAGAGAUAAAGGUGGGAAUGAUAGAGUAGAUCGUUUUCAGUCUGAGUCAUACUCCAAACAGGUAGAGUAGAAAGUAAAUUCGUUAGGGUAUUUAUGGGCUGAAGGUUUAAACUUCAGCCUUUUUU | ..((((((......................................(((.((...)).)))....))))))..............((((....))))....(.(((((((((.......)))))))))...). | [
"AE004439.1/147426-147558",
"FQ312006.1/1350346-1350443",
"FQ312002.1/1295729-1295828",
"CP000746.1/870985-871073",
"CP001607.1/1451194-1451326",
"CP002276.1/1248713-1248598"
] | [
"------------------ACAUCUGUUAGAGAUAAAGGUGGGAAUGAUAGAGUAGAUCGUUUUCAGUCUGAGUCAUA-CUCCAAACAGGUAGAGUAGAAAGUAAAUUCGUUAGGGUAUUUAUGGGCUGAAGGUUUA-AACUUCAGCCUUUUUU",
"------------------ACAUCUGUU---------------------------AAGCGAUUGCAGGUUG---------CUCCAACAGGUAGAGUAGAAAGUAAAUUCGUUAGGGUUCAAAAAGGCUGAAGGUUUA-AACUUCAGCCUUUUUU",
... | rfam_14_5_mafft |
AE004969.1_1040064-1039950 | UGUCGGAAUAUCUGCUAAAAUUCCGCAUUUUCCGCACCGGGUUUCCGCACCGGGACACUCGGGGCGUAUGUUCAAUUUGUCGGAAUGGAGUUUUUAGGGAUAUGGGGUUGAAAAA | ..((...((((((.(((((((((((....................(((.(((((...))))).)))....(((........))).))))))).)))))))))).))......... | [
"AE004969.1/1040064-1039950",
"AE002098.2/934700-934801"
] | [
"UGUCGGAAUAUCUGCUAAAAUUCCGCAUUUUCCGCACCGGGUUUCCGCACCGGGACACUCGGGGCGUAUGUUCAAUUUGUCGGAAUGGAGUUUUUAGGGAUAUGGGGUUGAAAAA",
"UGUCGGAAUAUCUGCUAAAAUUCCGCAUU------------UUUCCGUCCCGGGACACUCGGGGCGUAUGUUCAAUUUGUCGGAAUGGAG-UUUUAGGGAUAUGGGCUUGAAAAA"
] | rfam_14_5_mafft |
AE005674.2_286849-287502 | AAGUUGUGGACGAAAUUAGAAUAAGAAUUGCUGGUAAUACGGCUGCGCCUUGUUUCCAUGUGCUAAAAAAUAAGGGAUAUAAAGUAACAAUGGAAACUCAUGCAUUAUCUGACGAUUGUUUAGAUUGUGUAUAUGAUUGGUAUGCGGAAAAAAAUGGACAAUUUUUUAGUGCAACGAGUCCAGAAGAGUUACUUGGAUUAGUUGCAAUGUGGGAAGUUCGUGGUAAUGACUGGAGAGCUAAUUUGAAUGAGAUAAAUACUUAUCAAAAAGCCAUAGAAGAAUCCCCGUUUUUUGAUAAAAACGGCAAUGAAAUAGAGUCU... | ..((..(((((((((((((((((((((..((((......))))((((....(((((((((((((..................))).)).))))))))...))))....((((.(((((((((..((.(((((((.....))))))).)).....)))))))))..))))((((((.(((((((.........))))))).)))))).(((((..(((((.((((....))))..)))))..(((((.((((.......)))))))))...))))).........((((((((....))))))))(((((((((..(((..... | [
"AE005674.2/286849-287502",
"AFGZ01000006.1/19734-20386"
] | [
"AAGUUGUGGACGAAAUUAGAAUAAGAAUUGCUGGUAAUACGGCUGCGCCUUGUUUCCAUGUGCUAAAAAAUAAGGGAUAUAAAGUAACAAUGGAAACUCAUGCAUUAUCUGACGAUUGUUUAGAUUGUGUAUAUGAUUGGUAUGCGGAAAAAAAUGGACAAUUUUUUAGUGCAACGAGUCCAGAAGAGUUACUUGGAUUAGUUGCAAUGUGGGAAGUUCGUGGUAAUGACUGGAGAGCUAAUUUGAAUGAGAUAAAUACUUAUCAAAAAGCCAUAGAAGAAUCCCCGUUUUUUGAUAAAAACGGCAAUGAAAUAG... | rfam_14_5_mafft |
AE007869.2_109596-109822 | UUUUGGCGAUCUGGUUGUCUUUUUAUCCCUCCUCUCUGAGACGCUGCGCUGUUCAAAGAAACUUGACUUUGAGACCCUUCCAACCUACGUACUUCGCCAUCGAUAUUUGUUUGACGACCAGAGCUUCGGCGUCUUUCCAGACGCUCACGACGAUCUUUUCCUUCAAAUUCGACCCAAGUCCGCACUGCUUGCAGUGCAAAUACAAUUGCCAACGGAAGGAAAUCGUU | ....(((..((((((((((.........(((......)))..((...))..(((((((........))))))).............(((....(((....)))....)))..)))))))))))))..(((((((....)))))))...((((((...(((((((......(((....))).((((((....)))))).................))))))))))))) | [
"AE007869.2/109596-109822",
"AECL01000004.1/46476-46702"
] | [
"UUUUGGCGAUCUGGUUGUCUUUUUAUCCCUCCUCUCUGAGACGCUGCGCUGUUCAAAGAAACUUGACUUUGAGACCCUUCCAACCUACGUACUUCGCCAUCGAUAUUUGUUUGACGACCAGAGCUUCGGCGUCUUUCCAGACGCUCACGACGAUCUUUUCCUUCAAAUUCGACCCAAGUCCGCACUGCUUGCAGUGCAAAUACAAUUGCCAACGGAAGGAAAUCGUU",
"UUUUGGCGAUCUGGUUGUCUUUUUAUCCCUCCGCUCUCAGACGCUGCGCGGUUCAAAGAAACUUGACUUUGAGACCCUUCCA... | rfam_14_5_mafft |
AE008384.1_2915320-2915131 | GCCUUUGGGCACGCAGGAUUCAGGGGAGGGCUCAAACUUUGCUGAAUCCUGCAGAACAUUCCCACAUUUGAAAACCCCAUAAUCCUUUAAAAGUUUUAUGUGUAAACUCUCAAACAAUCAGGCAUAAGAGAAGAAUACAAAUCUGAAAUAAAUUAACAGAAAAAUAGUUUGAGAGCUUACACAGAAGCUA | ..(((((((...(((((((((((.((((........)))).)))))))))))........)))................(((..(((...)))..)))((((((..(((((((((..((........))..(((.......)))......................)))))))))..))))))))))... | [
"AE008384.1/2915320-2915131",
"AE010299.1/1814751-1814939"
] | [
"GCCUUUGGGCACGCAGGAUUCAGGGGAGGGCUCAAACUUUGCUGAAUCCUGCAGAACAUUCCCACAUUUGAAAACCCCAUAAUCCUUUAAAAGUUUUAUGUGUAAACUCUCAAACAAUCAGGCAUAAGAGAAGAAUACAAAUCUGAAAUAAAUUAACAGAAAAAUAGUUUGAGAGCUUACACAGAAGCUA",
"GCCUUCGAGCAUGCAGGAUUCAGGGCAGGUUUCAAACUCUACCGAAUCCUGUAGAACAUUCUUACUUUCCAGAAAUUCAUAAUCCUUUAAAAGUUUUAUGUGUAAACUCUCAAACAAUC... | rfam_14_5_mafft |
AE008384.1_4065452-4065319 | CGGUUGCUUACGAGUAAAUCAAAGCCUCAUUUCACACACACACGAGAAUCGAAACGAUUACUCUAGAAGGAUAGGUUUCAUCCCUUCUUCCUGUCCGUUCCUGACGUUGACUCGUGAGCAACUAACUUCCUUCA | .(((((((((((......(((......................((((((((...))))).)))..((((((((((..............))))))).))).)))........)))))))))))........... | [
"AE008384.1/4065452-4065319",
"AE010299.1/3710207-3710077"
] | [
"CGGUUGCUUACGAGUAAAUCAAAGCCUCAUUUCACACACACACGAGAAUCGAAACGAUUACUCUAGAAGGAUAGGUUUCAUCCCUUCUUCCUGUCCGUUCCUGACGUUGACUCGUGAGCAACUAACUUCCUUCA",
"CGGUUGCUUGCGAGAUUAUCAAAGCCUCAUUUCACACACACACGAGAAUCGAAACGAUUACUCUAGAAGGAUAGGUUUCAUCCCUUCUUCCUGUCCGUUCCUAACG-UGGCUCGUGAGCAACUACCCUCUCA--"
] | rfam_14_5_mafft |
AE008918.1_466022-466261 | GAUUUAGACACUCUACGAAAUCGUUGGGCCCUACUGGACAAGCCUUUGGCCAGAAUCCACUUUCAGGGGGUGGAGGGUAGCAUAGGGUAUCACCCAAUUGCCACUCCUUUGAUCCCGCGACACUACUAGAAGCCUAAAGUUCGCGGUUGGCCCUACUAAUCGGCAUCGCACCCCGCCGGACCUCCCCCCAUCAACGGCUGUCACAGUCUGGGGCGGGAGUCCGUGGGCGUCUGGAUGUCC | ((((((((...))))...))))((.(((((...((((.(((....))).))))..((((((((...))))))))((((.(((..((((...))))...))).))))........((((((.(((..(((....))).)))))))))..))))).)).....((((((..(((((((.((((.((((((((.....(((((...)))))))))).))).))))))))).))...)))))). | [
"AE008918.1/466022-466261",
"CP000709.1/834089-833850",
"AE014292.2/832345-832106",
"CP000873.1/831649-831410",
"ACBI01000054.1/20586-20347"
] | [
"GAUUUAGACACUCUACGAAAUCGUUGGGCCCUACUGGACAAGCCUUUGGCCAGAAUCCACUUUCAGGGGGUGGAGGGUAGCAUAGGGUAUCACCCAAUUGCCACUCCUUUGAUCCCGCGACACUACUAGAAGCCUAAAGUUCGCGGUUGGCCCUACUAAUCGGCAUCGCACCCCGCCGGACCUCCCCCCAUCAACGGCUGUCACAGUCUGGGGCGGGAGUCCGUGGGCGUCUGGAUGUCC",
"GAUUUAGACACUCUACGAAAUCGUUGAGCCCUACUGGACAAGCCUUUGGCCAGAAUCCACUUUCAGGGG... | rfam_14_5_mafft |
AE009441.1_1238265-1238321 | GAGUGCCGCCGGAGAGCCGCGCGCCGCGGCCCCAUGAGCGGCGGUUCCCCGGCCAUA | ....((((((.....((((((...)))))).........))))))............ | [
"AE009441.1/1238265-1238321",
"CP003316.1/101700-101755"
] | [
"GAGUGCCGCCGGAGAGCCGCGCGCCGCGGCCCCAUGAGCGGCGGUUCCCCGGCCAUA",
"GAGUGCCGCCCGAGAGCCGC-UUCUGCGGCCCAGUGAUCGGCGGUUCCCCGGCUAUU"
] | rfam_14_5_mafft |
AE009441.1_648915-648982 | GCCCCUGGCGUGGGGCGUCGAGGCGCCGCCACGGCCGCUGUGAAAACGCCCCCUCCAAGGGGCGCACA | ((((((.....(((((((.....(((((...)))).)........))))))).....))))))..... | [
"AE009441.1/648915-648982",
"CP001014.1/177705-177772",
"CP000504.1/1136982-1136915",
"CP000660.1/236305-236238",
"CP000561.1/649113-649180"
] | [
"GCCCCUGGCGUGGGGCGUCGAGGCGCCGCCACGGCCGCUGUGAAAACGCCCCCUCCAAGGGGCGCACA",
"GCCCCUGGCGUGGGGCGUCGAGGCGCCGCGUGGGCGGCUGUGAAAAUGCCCCCUCCAAGGGGCGGACA",
"GCCCCUGGCGUGGGGUGUCGAGGCGCCGUGUUGGCGGCUAUGAAAACGCCCCCUCCGAGGGGCAGAUA",
"GCCCCUGGCGUGGGGUGUCGAGUCGCCGUGUGGGCGGCUGUGAAAACGCCCCCUCCGCGGGGCGUACA",
"GCCCCUGGCGUGGGGUGUC... | rfam_14_5_mafft |
AE009441.1_679548-679612 | GGCAGGAUCAGCCCCAGAGCCGGCCGGACGGCCGCCUGUGAUAGGGGCCCCGGUCAAAACCUCUG | ..........((((((....(((((....))))).......).)))))................. | [
"AE009441.1/679548-679612",
"CP000660.1/200535-200475"
] | [
"GGCAGGAUCAGCCCCAGAGCCGGCCGGACGGCCGCCUGUGAUAGGGGCCCCGGUCAAAACCUCUG",
"GGCAGGAUCGGCCCCAGAGACGGCCGAGGCGCCGCCUGUGAGGGGGGCUCCGGUU----CCUCUA"
] | rfam_14_5_mafft |
AE009441.1_880183-880239 | CGCUCGCGGCGGGGCCGCCUUAAGUGUCCGCCGCUCAUUUGCCCCCAAUUCGGGGGU | .....(((((((.((.((.....)))))))))))......((((((.....)))))) | [
"AE009441.1/880183-880239",
"LOBY01000142.1/6175-6119"
] | [
"CGCUCGCGGCGGGGCCGCCUUAAGUGUCCGCCGCUCAUUUGCCCCCAAUUCGGGGGU",
"GGAUCGCGGCGGGGCCGCCUCAAGUGUCCGCCGCUCAUCUGCCCCCGCUCCGGGGGA"
] | rfam_14_5_mafft |
AE009950.1_1226103-1226159 | CCCCUCCCCUCUCACACCCCCGUGAGAAGUGAGCGGGGGGCGGUCGGGGAGGGGACA | (((((((((.......(((((((.........)))))))......)))))))))... | [
"AE009950.1/1226103-1226159",
"AP006878.1/1545183-1545239",
"CP001398.1/551052-551108"
] | [
"CCCCUCCCCUCUCACACCCCCGUGAGAAGUGAGCGGGGGGCGGUCGGGGAGGGGACA",
"GCCCUCCCCUCUCACACCCCCGGGAGCGGUGACCGGGGGGCGGUCGGGGAGGGCACA",
"GCCCUCCCCUCUCACACCCCCGUGAAGGGUGAGCGGGGGGCGGUCGGGGAGGGCACA"
] | rfam_14_5_mafft |
AE010299.1_1661362-1661247 | GUCUAAGCGAACAGACAAAAAACAAAAAACGCCUCCUAAAUCGAUGAAUAAACUUGAAACGCUGCAUAUUCCUCACCUGUGAGUGCAGGCAGGCGGGGAAUAUCAGGUUCAAGGGC | ........(......).....(...(..............)...).......((((((...(((.(((((((.(.(((((........))))).).)))))))))).))))))... | [
"AE010299.1/1661362-1661247",
"AE008384.1/800086-799972"
] | [
"GUCUAAGCGAACAGACA-AAAAACAAAAAACGCCUCCUAAAU-CGAUGAAUAAACUUGAAACGCUGCAUAUUCCUCACCUGUGAGUGCAGGCAGGCGGGGAAUAUCAGGUUCAAGGGC",
"GUCU-AGCGAACAGACGUAAAAAUGGGAAACGCCUCCUAAAUAUAUUGUACAAACUUGCAAUGCUGGA-AUUCCCCACCUGUG-GUGCAGGCAGGUGUGGAGUUUCAGGUGCAAGGGA"
] | rfam_14_5_mafft |
AE010300.2_3674576-3674690 | AAACAAAACUUUAUGGAUAAAUCUGGGAGUAAAAUGUAUCUACUCGAAGAACAACAAACACAAUCGAAAGGAGACUACAUCUUGAUUUGCGCCGGAUGCAGAUCAAAAGUCGCAC | .......(((((..(((....))).)))))...((((((((..((((................))))....))).))))).((((((((((.....))))))))))......... | [
"AE010300.2/3674576-3674690",
"AKWO02000047.1/149928-149814",
"AHOR02000061.1/32160-32055"
] | [
"AAACAAAACUUUAUGGAUAAAUCUGGGAGUAAAAUGUAUCUACUCGAAGAACAACAAACACAAUCGAAAGGAGACUACAUCUUGAUUUGCGCCGGAUGCAGAUCAAAAGUCGCAC",
"AAAUAGAUCAGUAUGGACAUAUCUGGGAGCAAAAUGUAUUUACUCGAAGAAAAACAAACACAACUGAAAGGGGAUCAAACCUUGACUUGCGCAGGAUGCAGAUCAAAAGUCACGC",
"AAAUAGAUCAGUAUGGACAUAUCUGGGAGCAAAAUGUAUUUACUCGAAGAAAAACAAACACAACUGAAAGGAG... | rfam_14_5_mafft |
AE013599.4_1652685-1652824 | AAACGUGUUCGGAUACCGCUGUAGAGAUAAGAGACUGUAGCUCUAUGGCCACCAAGAGCACGGAUAACAAAAACAAUGUAUUCUUCGAUGAGCCUGCCUGAAUGAGUUUCAAAGCAGGCACAGAUACGGAAUAUACAAUA | ...(((((((.......(((((((((...((...))....)))))))))......)))))))..............((((((((....((.((((((.((((.....))))..)))))).)).....))))))))..... | [
"AE013599.4/1652685-1652824",
"AASW01040202.1/172-33"
] | [
"AAACGUGUUCGGAUACCGCUGUAGAGAUAAGAGACUGUAGCUCUAUGGCCACCAAGAGCACGGAUAACAAAAACAAUGUAUUCUUCGAUGAGCCUGCCUGAAUGAGUUUCAAAGCAGGCACAGAUACGGAAUAUACAAUA",
"AAACGUGUUCGGAUACCGCUGUAGAGAUAAGAGACUGUAGCUCUAUGGCCACCAAGUGCACGGAUAACAAAAACAAUGUGUUCUUCGAUGAGCCUGCCUGAAUGAGUUUCAAAGCAGGCACAGAUACGGAAUAUACAAUA"
] | rfam_14_5_mafft |
AE013599.4_8048808-8048631 | UUUACGUGGUUAGAAACGUUUCCAAGUGAUCAGCCUCUCUGGAAAUGCUUCAUGCCGCGUUAGAAAAACGACGAGCUCCCAGGUUACUGCCAAAUUUGCGAUAAAACGGGAGCUGCAAUGAAUAUGUUCGUGGCGAUUGUUAAGAAUUAAUCGUGACUGCUGAUAGUUGCAUACAUAU | ...(((((((..(((.((((((((.(.((......)).))))))))).)))..)))))))..............((((((...(((.(((.......))).)))...))))))((((((..((..((..((.(((((((........))))))).)).))..)).))))))....... | [
"AE013599.4/8048808-8048631",
"AAST01021112.1/582-405",
"AAEU02000431.1/24048-23872"
] | [
"UUUACGUGGUUAGAAACGUUUCCAAGUGAUCAGCCUCUCUGGAAAUGCUUCAUGCCGCGUUAGAAAAACGACGAGCUCCCAGGUUACUGCCAAAUUUGCGAUAAAACGGGAGCUGCAAUGAAUAUGUUCGUGGCGAUUGUUAAGAAUUAAUCGUGACUGCUGAUAGUUGCAUACAUAU",
"UUUACGUGGUUAGAAACGUUUCCAAGUGAACAGCCUCUCUGGAAAUGCUUCAUGCCGCGUUAGAAAAACGACGAGCUCCCAGGUUACUGCCAAAUUUGCGAUAAAACGGGAGCUGCAAUGAAUAUGUUCGU... | rfam_14_5_mafft |
AE014291.4_1781160-1781067 | AUCAACCGACUGAUAAAAAGACGGCCCAUCGUCUCGACGCUAAUGUCGCAGGGAAUGAGAGCCGGACCGAACAACCGAAAGGACAACAAAUGUU | ((((......)))).......((((((((..(((((((......)))).)))..))).).))))..........((....))............ | [
"AE014291.4/1781160-1781067",
"ADFB01000086.1/540-447"
] | [
"AUCAACCGACUGAUAAAAAGACGGCCCAUCGUCUCGACGCUAAUGUCGCAGGGAAUGAGAGCCGGACCGAACAACCGAAAGGACAACAAAUGUU",
"AUCAACCGACUGAUAAAAAGACGGCCCAUCGUCUCGACGCCAAUGUCGCAGGGAAUGAGAGCCGGACCGAACAACCGAAAGGACAACAAAUGUU"
] | rfam_14_5_mafft |
AE014292.2_1083352-1083395 | ACCACAUAAGCGCCGGCCAAAGGCGCAUCAGGGGAACAUGAACA | .((......(((((.......)))))......)).......... | [
"AE014292.2/1083352-1083395",
"CP002079.1/1137150-1137193"
] | [
"ACCACAUAAGCGCCGGCCAAAGGCGCAUCAGGGGAACAUGAACA",
"ACCACAUAAGCGCCGGCCAAAGGCGCAUCAGGGGAACAUGAAUG"
] | rfam_14_5_mafft |
AE014296.4_20999620-20999479 | UUCGGAUAUAUGCCUUAACUUUUGUGAAAAUUCUGAGAAUUGUUUCCAAUUCACAAUAUGGCAAUAUCCUAGAAUAAUGAACAGGAACUCUGUGCAAUGGCAUUGGAGCUUGUGGCAUUGCAUCGUUCUUCCUGCGACAUUC | ...((((((.((((.((....(((((((.....((.(((....))))).))))))))).))))))))))......((((..((((((..(.((((((((.(((........))).)))))))).)...))))))...)))). | [
"AE014296.4/20999620-20999479",
"AASW01028085.1/1372-1513",
"AAKO01002299.1/23854-23713"
] | [
"UUCGGAUAUAUGCCUUAACUUUUGUGAAAAUUCUGAGAAUUGUUUCCAAUUCACAAUAUGGCAAUAUCCUAGAAUAAUGAACAGGAACUCUGUGCAAUGGCAUUGGAGCUUGUGGCAUUGCAUCGUUCUUCCUGCGACAUUC",
"UUCGGAUGAAUGCCCUAACUUUUGUGAAAAUGCUUAGAAUUGUUUCCAAUUCACAAUAUGGCAAUAUCCUAGAAUAAUGAACAGGAACUCUGUGCAAUGGCAUUGAAGCUUGUGGCAUUGCAUCGUUCUUCCUGCGACAUUC",
"UUCGGAUGAAUGCCCUAAC... | rfam_14_5_mafft |
AE014297.2_5539329-5539487 | CAAGCGUUGGGAAAGCGUCGACACUGUAAACAGUGAGUGUAGACACUGACCUCAUAACGCUAGAUUAACUUAAAACUGAGACGUUAACGUUUUAGUUGAGCAAACAGGGCCGCAAAGAUUUAAGUCUUUCUUUGAUCGGUAGUAAGCCGCUCACACAAA | (.(((((((((..((.(((.(((((..........))))).))).))..)))...)))))).)...........(((((((((....)))))))))(((((.......((((((((((..........))))))..))))........)))))...... | [
"AE014297.2/5539329-5539487",
"AAGH01021807.1/1648-1806",
"AAEU02000008.1/511385-511543"
] | [
"CAAGCGUUGGGAAAGCGUCGACACUGUAAACAGUGAGUGUAGACACUGACCUCAUAACGCUAGAUUAACUUAAAACUGAGACGUUAACGUUUUAGUUGAGCAAACAGGGCCGCAAAGAUUUAAGUCUUUCUUUGAUCGGUAGUAAGCCGCUCACACAAA",
"UAAGCGUUGGGAAAGCGUCGACACUGUAAACAGUGAGUGUAGACACUGACCUCAUAACGCUAGAUUAACUUAAAACUGAGACGUUAACGUUUUAGUUGAGCAAACAGGGCCGCAAAGAUUUAAGUCUAUCUUUGAUCGGUAGUAAGCCGC... | rfam_14_5_mafft |
AE016825.1_1347496-1347407 | UCUUUGAGAUGCAGCAAUUGCUUCUUGAUAGUUUCUCCUCUAUUUCUCCUUUGUAGACUUGGCGCGGGCCGCAAGGCACCGCGCAUUUUU | ...((((((.(.........).))))))..........(((((.........)))))....(((((((((....))).))))))...... | [
"AE016825.1/1347496-1347407",
"AP012224.1/1116719-1116633"
] | [
"UCUUUGAGAUGCAGCAAUUGCUUCUUGAUAGUUUCUCCUCUAUUUCUCCUUUGUAGACUUGGCGCGGGCCGCAAGGCACCGCGCAUUUUU",
"UUGUUGAGACGCAGCAAUUGCUUCUUGAUAGUUUCUCCUCUAUUUCUCCUUUGUAGACUUGGCGCGG---ACAAAUGUCCGCGCAUUUUU"
] | rfam_14_5_mafft |
AE016830.1_1345556-1346183 | UGCCAAUUAUCCCGAAUUGGUUUUUUCAUACUUACUCCUACCAAGAGUAAAUAACAACCUUCAUUUCCACCACAGACGACGGUCGUGGUGGUUUUUUUUGUUUAGGUGCUAGUUUUUUUGCUAUCAAUUGACUAGGAGAAGUGAACGUUCUUUAAGAAUUUGUCAUUUCAAAUUUACGGAACCGCAAGAAACGAUUUGCUUCUUCCUCUAACUGAGUAAUUUCUUCUUCUGUUAACUCUUCCGUAGUAAUGUGAAUAUGUAACUCUUUUUGUGUGCUUUUCAUAGGUGCCUGAUGAUUAAUCUCUGUUUGUUGGGUGCGG... | .(((((((......))))))).(((((....((((((.......))))))...(((((((((.((((((((((.(((....))))))))))(((((((((.((((.((.((((......)))).)).)))).))))))))).(((()))).....(((((((......)))))))((((((.((((((....(((((((((((((.(((((..(((.(((((.....((((((..((........(((.((((((...(((((.......)).)))..))))))..)))..(((.....))).(((((((.(((((...)... | [
"AE016830.1/1345556-1346183",
"CP002491.1/1791527-1792152",
"AECB01000048.1/138833-139458",
"CP002621.1/1209639-1210263"
] | [
"UGCCAAUUAUCCCGAAUUGGUUUUUUCAUACUUACUCCUACCAAGAGUAAAUAACAACCUUCAUUUCCACCACAGACGACGGUCGUGGUGGUUUUUUUUGUUUAGGUGCUAGUUUUUUUGCUAUCAAUUGACUAGGAGAAGUGAACGUUCUUUAAGAAUUUGUCAUUUCAAAUUUACGGAACCGCAAGAAACGAUUUGCUUCUUCCUCUAACUGAGUAAUUUCUUCUUCUGUUAACUCUUCCGUAGUAAUGUGAAUAUGUAACUCUUUUUGUGUGCUUUUCAUAGGUGCCUGAUGAUUAAUCUCUGUUUGUUGGG... | rfam_14_5_mafft |
AE016830.1_3201675-3201535 | GAAAUCAUUCUUAUCAGAGUAUACAAAUACGAUGAUAAACAGUUGAAGCGAAUCUUGAUUUGCUUUUCCUAAACCUGAUUCUUUUAGAAUCAGGUUUUUGUUUAUCUAAAAGGCGGCAUUCGUUCAAAAACGGCUGUCGCC | ..........((((((..((((....))))..))))))..((..(((((((((....)))))))))..))((((((((((((...))))))))))))..............(((((((.(((((....))))).))))))) | [
"AE016830.1/3201675-3201535",
"CP002621.1/2723037-2722897"
] | [
"GAAAUCAUUCUUAUCAGAGUAUACAAAUACGAUGAUAAACAGUUGAAGCGAAUCUUGAUUUGCUUUUCCUAAACCUGAUUCUUUUAGAAUCAGGUUUUUGUUUAUCUAAAAGGCGGCAUUCGUUCAAAAACGGCUGUCGCC",
"GAAAUCAUUCUUAUCAGAGUAUACAAAUACGAUGAUAAACAGUUGAAGCGAAUCUUGAUUUGCUUUUCCUAAACCUGAUUCUUUUAGAAUCAGGUUUUUGUUUGUCUAAAAGGCGGCAUUCGUUCAAAAACGGCUGUCGCC"
] | rfam_14_5_mafft |
AE016830.1_569151-569329 | UUUAGGGGUAUCCCAAUAUCACUCUCUAGGGGUGACUCAGAGCAGGGGAAGGAGUUACCCCUAAAAAGUAUGUUAGAAUGAUUUUAUCGCAUCAUAUCCUUUUUUAUGUAAUUAGUUGAUAAAAUCUAUCUGUACUUAUAUUUAACGACUGAAAUCGGUCACUUACUGAAAAAACAUCU | ((((((((((.(((....((.((((((.(((....))))))).))))...)).).))))))))))((((((...(((..(((((((((((..((((........))))......).))))))))))..))))))))).........(((((....)))))................... | [
"AE016830.1/569151-569329",
"JF261298.1/1-176"
] | [
"UUUAGGGGUAUCCCAAUAUCACUCUCUAGGGGUGACUCAGAGCAGGGGAAGGAGUUACCCCUAAAAAGUAUGUUAGAAUGAUUUUAUCGCAUCAUAUCCUUUUUUAUGUAAUUAGUUGAUAAAAUCUAUCUGUACUUAUAUUUAACGACUGAAAUCGGUCACUUACUGAAAAAACAUCU",
"---AGGGGUAUCCCAAUAUCACUCUCUAGGGGUGACUCAGAGCAGGGGAAGGAGUUACCCCUAAAAAGUAUGUUAGAAUGAUUUUAUCGCAUCAUAUCCUUUUUUAUGUAAUUAGUUGAUAAAAUCUAUC... | rfam_14_5_mafft |
AE016830.1_681566-681449 | AAAGAGAGAUAUGCAGGAACAUACCUCUCUAGUAGCCACUACUAGUUAUAAGAACUAGCGGCUUACUGAGUUAUUGGUUUUAUUUCAAACGCUUAACCGUUCAGCUCCUCAAAGCUUA | ..((((((.((((......)))).))))))(((((((....((((((.....)))))).))).))))((((((.(((((...............))))).).)))))........... | [
"AE016830.1/681566-681449",
"CSXB01000067.1/316-206"
] | [
"AAAGAGAGAUAUGCAGGAACAUACCUCUCUAGU--AGCCACUACUAGUUAUAAGAACUAGCGGCUUACUGAGUUAUUGGUUUUAUUUCAAACGCUUAACCGUUCAGCUCCUCAAAGCUUA",
"AAAGAGAGGUAUGCGGGUACAUACCUCUCCUUUUAUACCAACACCAGUUAUAAGAACUGGUGGCUUACUGAGUUA--------AGUUUUGAAUCUUAACCGUUCGGC-CUACGAAGCUUG"
] | rfam_14_5_mafft |
AE016830.1_784383-784014 | GUUACGGUUAAUAAGUAAAGUAAAUAAAGGUUUCUCAAAAACAGCGUAAUGACCUGGGAGAGAACAACGAUAACAAUGAACCAUUCCCAUGAGUGUUGCCUGGCAAUAUUUGUGGGGAUUUUUUGAUUAUUGUUAGCAUUUUUCUAGACAAGAACAACUGAAAAAAGAGUUUCUUUUUUCCAUUAUGUUUUGUUUCUGAGUUUAACCAAAUCACUCAUUAUUUCAAGGAGGAAUUAGGUUAUGUCAGUACAAUUAGAAGUUAAAGAAAGAGCUAUCCGUCCACGUUCACUAAGAAAUCAGCUACGUCACGAAGGGAAAGU... | ..(((..(((((..((((.((((((((.((((((((.....(((.((....)))))...)))))..((((((((((.((...(((((((((((((((((...))))))))))))))))))).))).)))))))((((.(((((((((((((((......(((((((((...))))))))).......))))))))((((...(((((.(((..(((...........)))..))).)))))..))))................)))))))))))..(((..((((...((........))..)))).))).(((......... | [
"AE016830.1/784383-784014",
"ACAQ01000023.1/41291-40922"
] | [
"GUUACGGUUAAUAAGUAAAGUAAAUAAAGGUUUCUCAAAAACAGCGUAAUGACCUGGGAGAGAACAACGAUAACAAUGAACCAUUCCCAUGAGUGUUGCCUGGCAAUAUUUGUGGGGAUUUUUUGAUUAUUGUUAGCAUUUUUCUAGACAAGAACAACUGAAAAAAGAGUUUCUUUUUUCCAUUAUGUUUUGUUUCUGAGUUUAACCAAAUCACUCAUUAUUUCAAGGAGGAAUUAGGUUAUGUCAGUACAAUUAGAAGUUAAAGAAAGAGCUAUCCGUCCACGUUCACUAAGAAAUCAGCUACGUCACGAAGGG... | rfam_14_5_mafft |
AE016830.1_829525-829052 | GUGUAAGGAGGACAUGCAAAUCAAUUGGUUGAAGAUUUUCUCAGUAGAUAAAAAUCGGUAAACUCAAAGUUGUUAGAAUUGCAAGAUUCACCUGUAAACAAUACGUGUAGAGUAAUUGUUAGUGAUAACUCGUAUCGGAAAAUAGGGAAAGGUUAUAGAAGGAUGGAGUUUCUAUAAAGCAUUUACCCUAUCUGUUAUCACCUAACGCAAGUUAUCCACCAUCCAAGCGUCGAAACUGUAUGAAAACAAGGUUUUAGUUUCACCACAUCACGUUCACCUUUUGCUUUACAUGUAUCGCGAAAUGUAAACACUUAUUCAAC... | (((((.((((((((......(((((((((((((((((((.((....))..))))))....(((........))).(((((....)))))...........(((((((((((((((..(...((((((((((......))..(((((((((..(((((((((.......)))))))))....))).))))))..))))))))...((((..................)))).(((((((................)))))))................)..)))))))))))))))...................))))))... | [
"AE016830.1/829525-829052",
"ACAR01000040.1/29974-29501",
"AEBJ01000007.1/29974-29501",
"AECE01000011.1/164315-164788"
] | [
"GUGUAAGGAGGACAUGCAAAUCAAUUGGUUGAAGAUUUUCUCAGUAGAUAAAAAUCGGUAAACUCAAAGUUGUUAGAAUUGCAAGAUUCACCUGUAAACAAUACGUGUAGAGUAAUUGUUAGUGAUAACUCGUAUCGGAAAAUAGGGAAAGGUUAUAGAAGGAUGGAGUUUCUAUAAAGCAUUUACCCUAUCUGUUAUCACCUAACGCAAGUUAUCCACCAUCCAAGCGUCGAAACUGUAUGAAAACAAGGUUUUAGUUUCACCACAUCACGUUCACCUUUUGCUUUACAUGUAUCGCGAAAUGUAAACACUUAU... | rfam_14_5_mafft |
AE017143.1_354088-354260 | AAUUUGUCGAAUAAAUAGGCUUCCAAAAAAUCAAAAAAGUGCGUAUUAUAUGCGCCUGAAUAUCAGCAUAUGCUGACAAUUAGAUGAUAUAAACAAGUACGGUUUUUUUAGCCGUACUUUUUAUUUGGAUGAUCCAUAAAAAAACUGCUUCAAUUUUAAUCACUUAUGUAAGA | .(.(((((.((...............(..(........(((((((...)))))))........((((....)))).....)...)....((((.((((((((((.....)))))))))))))).)).))))))....(..((((.((...)).))))..)............. | [
"AE017143.1/354088-354260",
"CP000569.1/208880-209050"
] | [
"AAUUUGUCGAAUAAAUAGGCUUCCAAAAAAUCAAAAAAGUGCGUAUUAUAUGCGCCUGAAUAUCAGCAUAUGCUGACAAUUAGAUGAUAUAAACAAGUACGGUUUUUUUAGCCGUACUUUUUAUUUGGAUGAU--CCAUAAAAAAACUGCUUCAAUUUUAAUCACUUAUGUAAGA",
"AAAUUGUCCAAUAAAUAGGCUUCCCAAUUAUGUAAAAAGUGCGUAUCAUACGCACCUCAAAAUCAGCUGAAGCUGACA--UAGAUUG-AUUAAAGAGUACGG-UUUUUUAGCCGUACUUUUUAUUUGGAUAGUU... | rfam_14_5_mafft |
AE017196.1_1039620-1039870 | AGAGUUUAGAGGGUUAUAGAGAAACCGGUCAGAUUAGGUUUUUAAUCUAAUCUGACCGAUAGCUUUAAUAGUGAGGUAAGCUUUAAUAUAGCACUCCUAAUUCAUAACGCUACACUCGUGCAUAAUUUAUUUUUAAUUUGUGCACGAGCGUUAGUAAAUUAUUUACUUUUUGAAAUAAAAUUUGGCAUCACUUUAAUAUUGAGACUUAGUAAACCUCAGUAGGUCUGCCAGUUGGGCCCAUAAGAAUUAUU | ..(((((..((((((.(((((....(((((((((((((((...)))))))))))))))....)))))......(((...(((.......)))...)))..........(((((.(((((((((((.(((....))).))))))))))).).))))...((((((........))))))...((((((..(((....(((((((...........)))))))))).))))))...))))).)..)))))... | [
"AE017196.1/1039620-1039870",
"AM999887.1/1099389-1099639",
"ACFP01000208.1/1606-1856"
] | [
"AGAGUUUAGAGGGUUAUAGAGAAACCGGUCAGAUUAGGUUUUUAAUCUAAUCUGACCGAUAGCUUUAAUAGUGAGGUAAGCUUUAAUAUAGCACUCCUAAUUCAUAACGCUACACUCGUGCAUAAUUUAUUUUUAAUUUGUGCACGAGCGUUAGUAAAUUAUUUACUUUUUGAAAUAAAAUUUGGCAUCACUUUAAUAUUGAGACUUAGUAAACCUCAGUAGGUCUGCCAGUUGGGCCCAUAAGAAUUAUU",
"AGGGUUUAGAAGGUUAUAGAGAAACCGGUCAGAUUAGGUUUUUAAUCUAAUCUGACCG... | rfam_14_5_mafft |
AE017333.1_1108968-1109111 | AUUGAGCGGCAGCUUCGACAUUGAUCAGACCUUUUCCAUAGUAGAAGGAGCUUCCCAAAUAAGUCGCCGUACUGGAGAGACGGUUGCGGACUUGUGAAGCUGAAAGGUUCGGAUGUUUUGACAAGAUCAAAGCUGCUGCUCCCG | ...((((((((((((.((..(((.(((((((((((.............((((((....((((((((((((.((....)))))))....))))))))))))))))))))).........))))))..)).))))))))))))... | [
"AE017333.1/1108968-1109111",
"X91262.1/1472-1329"
] | [
"AUUGAGCGGCAGCUUCGACAUUGAUCAGACCUUUUCCAUAGUAGAAGGAGCUUCCCAAAUAAGUCGCCGUACUGGAGAGACGGUUGCGGACUUGUGAAGCUGAAAGGUUCGGAUGUUUUGACAAGAUCAAAGCUGCUGCUCCCG",
"AUUGAGCGGCAGCUUCGACAUUGAUCAGACCUUUCCCAUAGUAGAAGGAGCUUCCCAAAUAAGUCGCCGUGCUGGAGAGACGGUUGCGGACUUGUGAAGCUGAAAGGUUCGGAUGUUUUGACAAGAUCAAAGCUGCUGCUCCCG"
] | rfam_14_5_mafft |
AE017354.1_341341-341434 | AAGCCUACAAAGGGUAGGAAACCUGAAGCUCUACAUAAAUCUCCACAGUGUCUUUCAGUUGCGGCUCAGAAACCGGGAAGUCGUUGCCUGUACU | ...(((((.....)))))..........................((((.((.......((.(((........))).)).......))))))... | [
"AE017354.1/341341-341434",
"LNYN01000019.1/141097-141190"
] | [
"AAGCCUACAAAGGGUAGGAAACCUGAAGCUCUACAUAAAUCUCCACAGUGUCUUUCAGUUGCGGCUCAGAAACCGGGAAGUCGUUGCCUGUACU",
"AAGCCUACUUUGGGUAGGAAACCUUAAGCUCUCCAUAUACCUCCAUCGUGUAUAUCAGUCGCGGCUCAGAACUCGGGUGGUCGUUGCCUGUACU"
] | rfam_14_5_mafft |
AECF01000037.1_53384-53796 | UGGGGUCAACUUUGGUACGGAAGCAGAUCGAAAAAUAGCUACUUUGUUAUUUGUCGUUGCUCUAAAAAGUCAACGGCAACUAAGCAUGCUUCAAGAAUUAGCUUUUUUCUGUUCAGAUCUCGAAAACAUUCAGCGGCUCAGUGAUUGUCGAACAAUAGAUGAAGCGCAAAAAAUUCUGGCUCAAGCCUAAAGUUACGUCUGAAAAAAUCAAUUCAAUUUGAAAUGUUCAAUAAUUAUUGAAAUAAUUUUAUAUUAAAAAAUAAAAUAUUUUAAUUUAAGAGAUCAAACAAAAAAGAUAAGAAGAUUCCUUGACAAAAAAU... | ...((((..((((......))))..))))...........((((((((((.....((((((.((((..((((..(((..(((........(((((((((..(((((((.((((..(((((.(((.............(((((((((((.(((((.((((((.(((............(((....)))....))).))))))......((((......))))..))))).)))))))))))....(((((((........))))))).......))).)..)))).)))).))))...)))..)))).))))).......)... | [
"AECF01000037.1/53384-53796",
"AE016830.1/381297-381708",
"ACHK01000048.1/90389-90800"
] | [
"UGGGGUCAACUUUGGUACGGAAGCAGAUCGAAAAAUAGCUACUUUGUUAUUUGUCGUUGCUCUAAAAAGUCAACGGCAACUAAGCAUGCUUCAAGAAUUAGCUUUUUUCUGUUCAGAUCUCGAAAACAUUCAGCGGCUCAGUGAUUGUCGAACAAUAGAUGAAGCGCAAAAAAUUCUGGCUCAAGCCUAAAGUUACGUCUGAAAAAAUCAAUUCAAUUUGAAAUGUUCAAUAAUUAUUGAAAUAAUUUUAUAUUAAAAAAUAAAAUAUUUUAAUUUAAGAGAUCAAACAAAAAAGAUAAGAAGAUUCCUUGACAA... | rfam_14_5_mafft |
AEDB01000020.1_61018-61119 | ACAGUACAAACUGAUCAGGCGAUAAACCCCAAAUUUUAAGGUUUAUGCAGCUGGGCCAUAAACGGCAGCAGAUGAAAAAUAUAACACAUCUGUGGGACAGUG | .........((((.....((.(((((...............)))))...))...(((.(..).))).(((((................)))))....)))). | [
"AEDB01000020.1/61018-61119",
"CP001056.1/1566915-1567006",
"CP001078.1/1526627-1526718",
"ACSC01000002.1/2287722-2287631"
] | [
"ACAGUACAAACUGAUCAGG-CGAUAAACCCCAAAUUUUAAGGUUUAUGCAGCUGGGCCAUAA--ACGGCAGCAGAUGAAAAAUAUAACACAUCUGUGGGACAGUG",
"ACAGUACAAACUGAUCAGGCCGAUAAAU----GAUUUUA---UUUAUGGAGCCGGGCCAUAAUAGUGGCAACAG------GAUAUUUAAUACCUGUGGGACAGUA",
"ACAGUACAAACUGAUCAGGCCGAUAAAU----GAUUUUA---UUUAUGGAGCCGGGCCGUAAUUUUGGCAACAG------GAUAUUUAAUACC... | rfam_14_5_mafft |
AEJN01000022.1_11402-11286 | CAAGUACUAAAUUUUUUACUUGAAUUAUUGACAUAAAAUAACUGCUUAUAAACCAAGAAGAAUUUUUUGCGUGGUAAAAAUCGCAUUAUUAAAAAUUUGUGUAAAGGGACAAAUUUU | ...(((..((((((((..((((..((((...((.........))...))))..))))))))))))..)))(((((....))))).......(((((((((........))))))))) | [
"AEJN01000022.1/11402-11286",
"FJ664181.1/95-210",
"AEJM01000010.1/53143-53258",
"CP001607.1/699770-699886"
] | [
"CAAGUACUAAAUUUUUUACUUGAAUUAUUGACAUAAAAUAACUGCUUAUAAACCAA-GAAGAAUUUUUUGCGUGGUAAAAAUCGCAUUAUUAAAAAUUUGUGUAAAGGGACAAAUUUU",
"CAAGUACUAAAUUUUUUACUUGAAUUAUUGACAUAAAAUAACUGCUUAUAAACCAA-GAAGAAUUUUUUGCGUGGUAAAAAUCGCAUUAUU-AAAAUUUGUGUAAAGGGACAAAUUUU",
"CAAGUACUAAAUUUUUUACUUGAAUUAUUGACAUAAAAUAACUGCUUAUAAACCAA-GAAGAAUUUU... | rfam_14_5_mafft |
AENG01000001.1_255918-255795 | CAUAAAUAUCUUGUAUAUUUAUAAUAUUGGCAGUGUAGUUCUUGCUGGCUCUGGGUGACGAGAGAUCUCGAAAUCAAGAGAUUGAACCAAAAAAACAACUCUUUUUAUAAGAGUUGUUUUUUUA | .((((((((.....))))))))...............((((..........((((...........)))).............)))).(((((..((((((((.....)))))))))))))... | [
"AENG01000001.1/255918-255795",
"FR668087.1/130837-130959",
"AENG01000001.1/137972-138094",
"S67629.1/2-125",
"CP000123.1/122501-122623"
] | [
"CAUAAAUAUCUUGUAUAUUUAUAAUAUUGGCAGUGUAGUUCUUGCUGGCUCUGGGUGA--CGAGAGAUCUCGAAAUCAAGAGAUUGAACCAAAAAAACAACUCUUUUUAUAAGAGUUGUUUUUUUA",
"UAUAAAUAUCUUGUAUAUUUAUAAGAUUGGCAGUGUGGUUCUUGCUGGACCUGGGUGA--UAAUAGAUCCCGAAAGACGGAGAUUGAACC-AAAAAACAACUCUUAUAAAAAGAGUUGUUUUUUUU",
"UAUAAAUAUCUUGUAUAUUUAUAAGAUUGGCAGUGUGGUUCUUGCUGGCUC... | rfam_14_5_mafft |
AEUX02000007.1_442608-442694 | AAGUCUGUUUCAGAAAACAGAAACCCAGGUCAAGUAAGUGUUCUCACUUACAAUAACACAGUUAAUGAUGGGGCAACUCAAAGUUAA | ...(((((((....)))))))............((((((......))))))..........(((((..((((....))))..))))) | [
"AEUX02000007.1/442608-442694",
"CP000829.1/1733433-1733349",
"CABY01000009.1/6168-6084",
"AEGO01000002.1/2028885-2028801"
] | [
"AAGUCUGUUUCAGAAAACAGAAACCCAGGUCAAGUAAGUGUUCUCACUUACAAUAACACAGUUAAUGAUGGGGCAACUCAAAGUUAA",
"AAGUCUGUUUGAGAAAACAGAAGCUCAGGUCAAGUAAGUG--CACACUUACAAUAACACAGUUGAUAAUGGGGAAACUCAGAGUCAA",
"AAGUCUGUUUGA-UAAACAGAAGCUCAGGUCAAGUAAGUG-UUCCACUUACAAUAACGCAGUUGAUGAUGAGGAGACUCAGAGUCAA",
"AAGUCUGUUUGAGAAAACAGAAGCUCAGGUCAAGUA... | rfam_14_5_mafft |
AEXQ01000083.1_43353-43249 | ACAGUACAAACUGAACAGGCAGCGACUAAGUCGUGUGGCCGGGUUGCUUAGCAACAGCAGAUUUAAUUAUUCAUAUUGAUGAUAAUUAACAUCUGUGGGACAGUA | .........((((.....((.(((((...)))))...))...(((((...))))).(((((..............................)))))....)))). | [
"AEXQ01000083.1/43353-43249",
"ADMN01000037.1/5181-5285"
] | [
"ACAGUACAAACUGAACAGGCAGCGACUAAGUCGUGUGGCCGGGUUGCUUAGCAACAGCAGAUUUAAUUAUUCAUAUUGAUGAUAAUUAACAUCUGUGGGACAGUA",
"ACAGUACAAACUGAACAGGCAGCGACUAAGUCGUGUGGCCGGGUUGCUUAGCAACAGCAGAUUUAAUUAUUCAUAUUGAUGAUAAUUAACAUCUGUGGGACAGUA"
] | rfam_14_5_mafft |
AEYC01000066.1_4818-4311 | UUGUAGGUGUGGUUCCAGGUGGUCGUUUCGCGGCCGAGGAUGUGCGCGCCGAAGUACUCGCCGUCGGCGAGCACGCCGAGGACGGUGUCGUCGCCGUACUCGCCGGUGCCGAUCUUGUUGAUCUUGCCGUGUGCGAUGAGCACGACCUGGUCCGCCGGUUGCCCGGCGGUGGCGAUGACCUGGCCCGGCUCGAGCCCACCCUGCCCGAAGCGGUCGGCCAGGGCGGCCAGCACCGUAUCGUCGUCGAAUCCGCGCAGCAGCGGCAGUUCCCGCAGUUCUUGCGGGAUGACCCGGAUGUCGGCGCCGGUGUUGGUGAAGGU... | .....(((((((.((..((.(((((((((.....(.((.((....(((((((.((.((.(((((((((......(.((((.(((((......))))).)))))....))))......(((.((...(..((.(((..(.(...(.....(...(((((.(.(...((....))...).....).))))).)...).).)..))).)..)..)...)).))).))))).)).))..(...((((((...(.((.(.(((.(.(......).)...)))).)).).))))))...)...)))))))..)).)).).)).)))... | [
"AEYC01000066.1/4818-4311",
"AM420293.1/4361402-4360896"
] | [
"UUGUAGGUGUGGUUCCAGGUGGUCGUUUCGCGGCCGAGGAUGUGCGCGCCGAAGUACUCGCCGUCGGCGAGCACGCCGAGGACGGUGUCGUCGCCGUACUCGCCGGUGCCGAUCUUGUUGAUCUUGCCGUGUGCGAUGAGCACGACCUGGUCCGCCGGUUGCCCGGCGGUGGCGAUGACCUGGCCCGGCUCGAGCCCACCCUGCCCGAAGCGGUCGGCCAGGGCGGCCAGCACCGUAUCGUCGUCGAAUCCGCGCAGCAGCGGCAGUUCCCGCAGUUCUUGCGGGAUGACCCGGAUGUCGGCGCCGGUGUUGGUG... | rfam_14_5_mafft |
AF022937.1_1-579 | GAUAAAAGAACCUAUAAUCCCUUCGCACACCGCGUCACACCGCGCUAUAUGCUGCUCAUUAGGAAUUACGGCUCCUUUUUUGUGGAUACAAUCUCUUGUAUACGAUAUACUUAUUGUUAAUUUCAUUGACCUUUACGCAAUCCUGCGUAAAUGCUGGUAUAGGGUGUACUUCGGAUUUCCGAGCCUAUAUUGGUUUUGAAAGGACCUUUAAGUCCCUACUAUACUACAUUGUACUAGCGUAGGCCACGUAGGCCCGUAAGAUAUUAUAACUAUUUUAUUAUAUUUUAUUCACCCCCCACAUUAAUCCCAGUUAAAGCUUU... | ...(((((...((.((((.(((..(((((..((((......))))....)).))).....))).)))).))...))))).(((((((((((....))))))((((((....))))))...............(((((((....)))))))((((((((((((((((((..((((....))))(((......))).......((((......))))....))))))...)))))))))))).((((.....)))).(((((((((.((((.....)))).))))))))).......)))))........((.(((((((((... | [
"AF022937.1/1-579",
"EU282007.1/1-579"
] | [
"GAUAAAAGAACCUAUAAUCCCUUCGCACACCGCGUCACACCGCGCUAUAUGCUGCUCAUUAGGAAUUACGGCUCCUUUUUUGUGGAUACAAUCUCUUGUAUACGAUAUACUUAUUGUUAAUUUCAUUGACCUUUACGCAAUCCUGCGUAAAUGCUGGUAUAGGGUGUACUUCGGAUUUCCGAGCCUAUAUUGGUUUUGAAAGGACCUUUAAGUCCCUACUAUACUACAUUGUACUAGCGUAGGCCACGUAGGCCCGUAAGAUAUUAUAACUAUUUUAUUAUAUUUUAUUCACCCCCCACAUUAAUCCCAGUUAAA... | rfam_14_5_mafft |
AF161266.1_10653-10720 | CCGUGUCAGAUCGCGAAAGCGCCACUUCGCCGAGGAGUGCAAUCUGUGAGGCCCCAGGAGGACUGGGU | .....(((((((((....)))...(((.......)))....))))).)....(((((.....))))). | [
"AF161266.1/10653-10720",
"HM596272.1/10629-10696",
"AY898809.1/10595-10661"
] | [
"CCGUGUCAGAUCGCGAAAGCGCCACUUCGCCGAGGAGUGCAAUCUGUGAGGCCCCAGGAGGACUGGGU",
"CCGUGUCAGGCCACGUAAGUGCCACUUCGCUGAGGAGUGCAGCCUGUACAGCCCCGGGAGGACCGGGU",
"CCGUGUCAGGUCACAU-UGUGCCACCUUGCCAGAAGGUGCAACCUGCGAGGCCCCAGGUGGACUGGGU"
] | rfam_14_5_mafft |
AF311056.1_10590-10635 | CAAAAGGCCUCCUGGAAGGCUCACCAGGAGUUAGGCCAUUCUAGAG | .(.(..(.(((((............))))).).......).).... | [
"AF311056.1/10590-10635",
"NC_003687.1/10609-10652"
] | [
"CAAAAGGCCUCCUGGAAGGCUCACCAGGAGUUAGGCCAUUCUAGAG",
"CAAAAGGCCUCCUGGAAGGCUCACCAGGAGUUAGGCCGUUUAGG--"
] | rfam_14_5_mafft |
AF346759.1_10299-10378 | GUUAGGUUUGGGCAAGGUGCAGGUUAGCUGCAGGGGCUUGAAAAACCCCCCCCCCCAUUCAAGACUUUUAGUGCAUUAGU | ...(((((.........(((((.....)))))(((...........))).............))))).(.....)..... | [
"AF346759.1/10299-10378",
"AF346759.1/10227-10286"
] | [
"GUUAGGUUUGGGCAAGGUGCAGGUUAGCUGCAGGGGCUUGAAAAACCCCCCCCCCCAUUCAAGACUUUUAGUGCAUUAGU",
"-----------GCAAGGUACGGAUUAGCCGUAGGGGCUUGAGAACCCCCCCUCCCCACUCA----UUUUAUUUCC-----"
] | rfam_14_5_mafft |
AFGZ01000047.1_125824-125645 | AACGAUACUAUUUUCUUAGAUGGUAAAUGUCUCGCCUGUGCUAUAUUUUGUUUUUCGGUUAGUUAAAUAUCGUACGUUCAUAUUUGAACGUUCUGCCGGAAUGCAUUAUCAAUAGAGGUAAAGUCGCAACCCCAAAUCGUAAAGGAAACCGUAGCACGUCUUAAGCAAGAACGUGCUGCG | .((((((((((((....)))))))....(.((.((((.((....((..(((.(((((((..............(((((((....)))))))...))))))).)))..))...)).))))..)).)..........))))).........(((((((((((((....))).)))))))))) | [
"AFGZ01000047.1/125824-125645",
"CP000034.1/996957-996778",
"CP000036.1/984279-984100"
] | [
"AACGAUACUAUUUUCUUAGAUGGUAAAUGUCUCGCCUGUGCUAUAUUUUGUUUUUCGGUUAGUUAAAUAUCGUACGUUCAUAUUUGAACGUUCUGCCGGAAUGCAUUAUCAAUAGAGGUAAAGUCGCAACCCCAAAUCGUAAAGGAAACCGUAGCACGUCUUAAGCAAGAACGUGCUGCG",
"AACGAUACUAUUUUCUUAGAUGGUAAAUAUCUCGCCUGUGCUAUAUUUUGUUUUUCGGUUAGUUAAAUAUCGUACGUUCAUAUUUGAACGUUCUGCCGGAAUGCAUUAUCAAUAGAGGUAAAGUCGCAA... | rfam_14_5_mafft |
AFNB01008472.1_2415-2312 | GAAUCGUUAAAAUUUGACGAAAGGGUACGUAAAAGAACUUCCUUUUUGAUGAUUUAUCUAUAUAUUAGACGUAAUUGAUUGUUUCUGAUUUAAGUAUCGUGGCA | (((((((((.........(((((((...((......)).)))))))))))))))).((((.....))))..........((((..((((......)))).)))) | [
"AFNB01008472.1/2415-2312",
"CP002685.1/9809815-9809713"
] | [
"GAAUCGUUAAAAUUUGACGAAAGGGUACGUAAAAGAACUUCCUUUUUGAUGAUUUAUCUAUAUAUUAGACGUAAUUGAUUGUUUCUGAUUUAAGUAUCGUGGCA",
"GAAUCGUU-AAAUUUGACGAAAGGGUACGUAAAAGAACUUCCUUUUUGAUGAUUUAUCUAUAUAUUAGACGUAAUUGAUUGUUUCUGAUUUAAGUAUCGUGGCA"
] | rfam_14_5_mafft |
AFWW01000001.1_265103-265404 | AAUUGUUGUCAUAUCGUGCUGGAAUGUGGUAACUCUGUAUGUAUUCGUUCGACAGUAGAUUAAUGAACACUCUAUUUAUGAAAGCUUUCUCCCUAGUGAUUAGCCUAGUCGUGAUUAGCGUGGUGGUGAUUAUUAUCCCACCGUGCGGGGCAGCACUUGGACGAAGAAUGGCUUAGAAAUCAGGCCCGAAUUCAAGAAAACCCCCGCACCGAAAGGUCGGGGGUUUUUUUUUCGGGCGUAAUGUAUAACGUAAGGGAGCAGAAAAUGGUUAGUGGUACAGAAUGCUGUUAUUCCCGCAAGAU | ....((((((((..(......)...))))))))...(((.(..(((((((.......))...)))))...).)))..........(((.(.(.((...((((((((((.(((.....))).(((((.(((....))))))))((.((((......)))).))(((....((.((........)).))...))).((((((((((((.(((....))))))))))))))).)).)))).))))...))..).).)))(((((.(..((........)).....).)))))............. | [
"AFWW01000001.1/265103-265404",
"BX950851.1/4733293-4732994",
"CP001790.1/4659105-4658806",
"CP001657.1/4554960-4554661"
] | [
"AAUUGUUGUCAUAUCGUGCUGGAAUGUGGUAACUCUGUAUGUAUUCGUUCGACAGUAGAUUAAUGAACACUCUAUUUAUGAAAGCUUUCUCCCUAGUGAUUAGCCUAGUCGUGAUUAGCGUGGUGGUGAUUAUUAUCCCACCGUGCGGGGCAGCACUUGGACGAAGAAUGGCUUAGAAAUCAGGCCCGAAUUCAAGAAAACCCCCGCACCGAAAGGUCGGGGGUUUUUUUUUCGGGCGUAAUGUAUAACGUAAGGGAGCAGAAAAUGGUUAGUGGUACAGAAUGCUGUUAUUCCCGCAAGAU",
"AAUUGUU... | rfam_14_5_mafft |
AGDE01000056.1_679-921 | CGCCCCGGUGCCGCAGGCGGUCUCCCUCAAGGACCACGAGGAGGAAAGAACCCCACCAAACCCCACCCCUCCCGCCCAGGCCGCCGCCUCACUCACGCGAGUGAACAUCGCCAACUCAGCUGGAUUCGGGAGCCCUUGCCUGCCCUACGCUCAGCGCAACCAACCGCAGACAUGCGACGGCCCUCGCCGGGACUGGCAUCCCAGUGCGAGGGCCUGACCACCGAGGAAGGCUCCAACUUCCUG | ......((((.....((((.....................................................))))............((((((....))))))..............(((((...........................))))).......................(((((.(((.((((......))))...))).)))))....))))..(((((.......))))).. | [
"AGDE01000056.1/679-921",
"BA000030.3/3913208-3912967"
] | [
"CGCCCCGGUGCCGCAGGCGGUCUCCCUCAAGGACCACGAGGAGGAAAGAA-CCCCACCAAACCCCACCCCUCCCGCCCAGGCCGCCGCCUCACUCACGCGAGUGAACAUCGCCAACUCAGCUGGAUUCGGGAGCCCUUGCCUGCCCUACGCUCAGCGCAACCAACCGCAGACAUGCGACGGCCCUCGCCGGGACUGGCAUCCCAGUGCGAGGGCCUGACCACCGAGGAAGGCUCCAACUUCCUG",
"UGCUCCGGUGCCAGGGGCGCUCUUCCCAAAGAACUACAAGGGUGAAAGAACCCCCACCAAGCCCC... | rfam_14_5_mafft |
AGSN01000066.1_17797-17888 | GCGGAUGGAUUAGGUUUCUCGCAAAAGGCAAGGUUUCAACCAUGUACAAGGCCGUCGGAUCGCGCGGGUCCCGGGUCAGCCGCGUGCUCUGG | .(.(((((.((....(.(..(....(((.....)))....)..).)..)).))))).)....((.((..(.(((.....))).)..)).)). | [
"AGSN01000066.1/17797-17888",
"BA000012.4/3919175-3919086"
] | [
"GCGGAUGGAUUAGGUUUCUCGCAAAAGGCAAGGUUUCAACCAUGUACAAGGCCGUCGGAUCGCGCGGGUCCCGGGUCAGCCGCGUGCUCUGG",
"GCGGAUGGUCUAGA-GUCCAGGAAAAGGCAGGG-UUCAACCAUGUAUAAGGCCGUCGGAUCACGGGGAUCCCGGGUCAGCCGCGUUCUCUGG"
] | rfam_14_5_mafft |
AGTL01000317.1_47527-47485 | AAAUUUGUACAAAUUCAAUAAAUUGCAGGAAAUACGUAGGUCU | ...(((.(.(((..........))).).)))............ | [
"AGTL01000317.1/47527-47485",
"U00096.2/740211-740253",
"AEMF01000001.1/944896-944854",
"AFGZ01000011.1/108373-108331"
] | [
"AAAUUUGUACAAAUUCAAUAAAUUGCAGGAAAUACGUAGGUCU",
"AAAUUUGUGCAAAUUCAAUAAAUUGCAGGAAAUACGUAGGCCU",
"AAAAUUGUGCAAAUUCAAUAUAUUGCAGGAGAUUAGUAGGCCU",
"AAAUUUUUGCAAAUUCAAUAAAUUGCAGGAAAUACGUAGGCCU"
] | rfam_14_5_mafft |
AHNZ02000335.1_6200-6404 | AGAGAACUUCUAUAAAAUUGAUUUUUAAUUUUUGUUGAUAGUCGCCAAACAACGACUUGAUGCAAAAAUCUAAUUGGAUAAUUAUCCUUUUUAAAUUUUGUAAAGGCUCUCAAUAAAUAAACACAGCAAAUACACAAAAUGAAAACUUCAAAUAAAACAAUUAGAGUGAGUGUUUAUGAAGAAAAUAUUUUGUAUUUCGAUUUUU | ...(...((.(...(((.(.(.(.......(((.(.....(...(........)...).....).)))....).).(..(....)..)......).)))...).))...).......................((((((((....(((((....(((((.((.....)).))))).)))))....))))))))............ | [
"AHNZ02000335.1/6200-6404",
"AE010300.2/3748278-3748475"
] | [
"AGAGAACUUCUAUAAAAUUGAUUUUUAAUUUUUGUUGAUAGUCGCCAAACAACGACUUGAUGCAAAAAUCUAAUUGGAUAAUUAUCCUUUUUAAAUUUUGUAAAGGCUCUCAAUAAAUAAACACAGCAAAUACACAAAAUGAAAACUUCAAAUAAAACAAUUAGAGUGAGUGUUUAUGAAGAAAAUAUUUUGUAUUUCGAUUUUU",
"AGAGAACUUCUAUAAAA-------UUAAUUUUUGUUGAUAGUCGCCAAACAACGACUUGAUGCAAAAAUCUAAUUGGAUAAUUAUCCUUUUUAAAUUUUGUAGA... | rfam_14_5_mafft |
AJ235269.1_287678-287363 | UUAGUUUUACAGCAGCCCUAGAAUUAAUUUGUGUUAAAGCCUGAACUGAUCCUUUACCAAAAGAUUUAGUACCAAGUAUUAUUGCUCUUUUAUGAUCUUGCAAAGCUCCAGCAACUAUUUCUGAAGCAGAUGCAGAAUUACCGUUUAUUAAAACAAUCAUAGGUACUUUUGGGGCUUUUAACGAAAACUCAUUCGCUUUAGUUUCGCUAUUACUUGAUGUAGUUCUACCUUUUGUUGUAACAAUGACACCAGAAUCAAUAAAAUAAUCACUAACAGCAAUAGCUUGAUCAAGUAUACCACCAGCAUUAUUACGUAA | ...((..((..((((((((((((...(((((((...........(((((..((((....))))..)))))....((((....))))......((((.(((((..(((.(((.........))).)))...))))).))))..((((....))))...)))))))..)))))))))).....((((......))))...((((...)))).((((((((.((((......((((((((......((....))....)))))))).....))))..(((....)))..))))))))........))..))..)).... | [
"AJ235269.1/287678-287363",
"CP003334.1/398228-397913"
] | [
"UUAGUUUUACAGCAGCCCUAGAAUUAAUUUGUGUUAAAGCCUGAACUGAUCCUUUACCAAAAGAUUUAGUACCAAGUAUUAUUGCUCUUUUAUGAUCUUGCAAAGCUCCAGCAACUAUUUCUGAAGCAGAUGCAGAAUUACCGUUUAUUAAAACAAUCAUAGGUACUUUUGGGGCUUUUAACGAAAACUCAUUCGCUUUAGUUUCGCUAUUACUUGAUGUAGUUCUACCUUUUGUUGUAACAAUGACACCAGAAUCAAUAAAAUAAUCACUAACAGCAAUAGCUUGAUCAAGUAUACCACCAGCAUUAUUACGUA... | rfam_14_5_mafft |
AKWN02000085.1_9204-8993 | UUAGAAAGUUCAGAAACAAUUCCAAAGUUAUUUGAAAGAACUCAAACAAAUGCCAAGUGAAAGAGGAUAGAAUUAAAAUUACAAAUAAAGAUCCGUACGAAGUUUUUAGAGUAGGGUAGUCAAACUUUCAAAAGGACGUAAGUAUAAAAUGAAGUUCGAAUCUUUUAGAGACUAAGGACUUAAAAAACUUAGAACCGUAUCUUCUUUAGGAA | .....((((((.........(((....(((((((...................)))))))....))).................................((((((((((...((((..((.((((((.......((....)).......)))))).))))))))))))))))..))))))......((((((...........)))))).. | [
"AKWN02000085.1/9204-8993",
"AE010300.2/1805671-1805460"
] | [
"UUAGAAAGUUCAGAAACAAUUCCAAAGUUAUUUGAAAGAACUCAAACAAAUGCCAAGUGAAAGAGGAUAGAAUUAAAAUUACAAAUAAAGAUCCGUACGAAGUUUUUAGAGUAGGGUAGUCAAACUUUCAAAAGGACGUAAGUAUAAAAUGAAGUUCGAAUCUUUUAGAGACUAAGGACUUAAAAAACUUAGAACCGUAUCUUCUUUAGGAA",
"UUAGAAAGUCCAGAAACAAUUCCAAAGUUAUUUAAAAAAACUCAAACAAAUGCCAAGUGAAAGAGGAUAGAAUUAAAAUUACAAAGAAAGAUCCGUA... | rfam_14_5_mafft |
AL009126.3_2219746-2219849 | GAACUAAAGGAGAAGUUCAUUCCCCUUUAGCUUAGCUCUCAUCGGCGUAUACGUUGGCGUUGUCUCUUUGGUCGGAGCCGCUUGCGUAUACGCUUUUUCUUUUU | ...(((((((.(((.....))).))))))).............(((((((((((.((((..(.((((......))))))))).))))))))))).......... | [
"AL009126.3/2219746-2219849",
"KY030782.1/56132-56029",
"CP002207.1/1608855-1608957"
] | [
"GAACUAAAGGAGAAGUUCAUUCCCCUUUAGCUUAGCUCUCAUCGGCGUAUACGUUGGCGUUGUCUCUUUGGUCGGAGCCGCUUGCGUAUACGCUUUUUCUUUUU",
"GAACUAAAGGAGAAGUUCAUUCCCUUUUAGCUUAGCUCUCAUCUGCGUAUACGUUGGCGUUGUCUCUUUGGUCGGAGCCGCUUGCGUAUACGCUUUUUCUUUUU",
"UAACUAAAGGAGAAGUUGAUUCCCCUUUAGCGU-UUAAUUAUCGGCGUAUACGUUUGCGUUGUCUCUUGCUACGGAGUCGCUUACGUGUACGCUU... | rfam_14_5_mafft |
AL590842.1_1217039-1217292 | UGUACGUUCAAAUAAUCAACAAACGAAAAAAAUGUGAAGAUAAACCCUUGCCAUUCUGAAGCAGCUCCCUAUAAUGCGCAUCCAUCGACACGGCGCUGUGAGCAACUUCACAGAGUGGCCGGGGAGAGCAGAGAAAAUUAACUGAUUAAGUGGUUGACUCUGUAGCGGGAAAGCGUAUUAUCUGCCUCCCGCGUUACCGUAAGAUUCGCCGCAAGGCAAACGGGUAACGAACGCUCUUUAACAAUUUAUCAGAC | ....(((((...................................((((.((((((((((((..((((...(((..((((.............)))))))))))..))))..)))))))).))))...((((((..(((((.((.....)))))))..)))))).((((((..(((.......))).))))))((((((........................)))))))))))..................... | [
"AL590842.1/1217039-1217292",
"CP007448.1/1100569-1100822"
] | [
"UGUACGUUCAAAUAAUCAACAAACGAAAAAAAUGUGAAGAUAAACCCUUGCCAUUCUGAAGCAGCUCCCUAUAAUGCGCAUCCAUCGACACGGCGCUGUGAGCAACUUCACAGAGUGGCCGGGGAGAGCAGAGAAAAUUAACUGAUUAAGUGGUUGACUCUGUAGCGGGAAAGCGUAUUAUCUGCCUCCCGCGUUACCGUAAGAUUCGCCGCAAGGCAAACGGGUAACGAACGCUCUUUAACAAUUUAUCAGAC",
"GUUGCGUUCAAAUAAUCAGCAGUCGGAAAAAACUUUAAUAUAAACCCUUGCCAUU... | rfam_14_5_mafft |
AL590842.1_2222488-2222295 | AAUAAGCAUUUAAUGUUCGCUGACAGAGUACCGAACGAACACAGUCCUGUUUAUCAAAACGGAUGAUGCCGAUCAUCUCAUCCUCAGUAAAACGCUCCAGUGCAUCGCUGAGACCCGAUUUCACGCCUCUAGGCAGAUCGCAUUGGGUAAUAUCACCAUUAACGAUGACCGUGACAUUUUCACCGAGGCGGGUC | .(((((((.....((((((................))))))......)))))))......(((((((....)))))))....((((((....(((....)))....))))))(((((.((((..(((....)))..((((...(((.........)))....))))....((((.....)))).))))))))). | [
"AL590842.1/2222488-2222295",
"CP007448.1/2051486-2051293"
] | [
"AAUAAGCAUUUAAUGUUCGCUGACAGAGUACCGAACGAACACAGUCCUGUUUAUCAAAACGGAUGAUGCCGAUCAUCUCAUCCUCAGUAAAACGCUCCAGUGCAUCGCUGAGACCCGAUUUCACGCCUCUAGGCAGAUCGCAUUGGGUAAUAUCACCAUUAACGAUGACCGUGACAUUUUCACCGAGGCGGGUC",
"AAUAAGCAUUUAAAGUGCGUUGGCAGAGUGCAGAGCGGACACAAUCCUGUUUAUCAAAGCGAAUGAUGCCAAUCAUGUCAUCUUCAGCAAAACGCUCCAAUGCAUCGCUAAGACC... | rfam_14_5_mafft |
AL590842.1_2736316-2736385 | UACAGGAUGUGCCCAUAAUAAAUUUCCGUUUCCGUGUAGCAAUGGUUACUGGAACGUCGCCCUGAUUGUU | ..((((..(((...............((((.(((.(((((....)))))))))))).)))))))...... | [
"AL590842.1/2736316-2736385",
"CP007448.1/2608195-2608264",
"ACCA01000048.1/28009-27940"
] | [
"UACAGGAUGUGCCCAUAAUAAAUUUCCGUUUCCGUGUAGCAAUGGUUACUGGAACGUCGCCCUGAUUGUU",
"UACAGGAAGUACCCAUAAUAAAUUUCCGUUUCCGUGUAGCAAUGGUUACUGGAACGCCGCCCUGAUUGUU",
"UACAGGAUAUGCCCAUAAUCAAUUUCCGUUUCCGUGUAGCAAUGGUUACUGGAACGCCGCCCCGAUUGUU"
] | rfam_14_5_mafft |
AL590842.1_3846865-3846671 | CACCGACAUCAAUGAUUCGUUUUGCGAACCAUGGCCGACAGCCAAAUAAGCGUGCAUGCCCAGCUCUUUCAUCUGCUGUUCGCCAAUCACGCGGGUGACGGUGUUGGUACUGAAAGCAUCCGCCAAUUGGCGAGCCUGAGACGCCAGAUAGGCGGCGUUACAGAUAUUGGGUGGCAUAUUGCCCAAGUCUUUUGC | ....(((....(((.(((((...))))).)))(((.....)))......((......))..(((..........)))((((((((((...(((((((.(((((....)))))....)))))))..))))))))))(((.((((((........)))))).)))...((((((........)))))))))...... | [
"AL590842.1/3846865-3846671",
"AALD02000045.1/29841-29647",
"CP003942.1/507168-507362",
"CP007448.1/4142675-4142481",
"CP000880.1/3085147-3084953"
] | [
"CACCGACAUCAAUGAUUCGUUUUGCGAACCAUGGCCGACAGCCAAAUAAGCGUGCAUGCCCAGCUCUUUCAUCUGCUGUUCGCCAAUCACGCGGGUGACGGUGUUGGUACUGAAAGCAUCCGCCAAUUGGCGAGCCUGAGACGCCAGAUAGGCGGCGUUACAGAUAUUGGGUGGCAUAUUGCCCAAGUCUUUUGC",
"CACCGACAUCAAUGAUUCGUUCUGCGAACCAUGGCCAACCGCCAGAUAAGAGUGCAUACCCAGCUCUUUCAUCUGCUGUUCGCCAAUGACGCGAGUGACGAUAUUGGUGCUGAA... | rfam_14_5_mafft |
AL590842.1_92360-92612 | CAACGGCGGGAACAAUCAGCAGUAACAGCAAACCGGGAACAACCAUGGCCAGAGCCCAAACGCCCCAGUCAAGAUGAAUGCCCAGAAUUUUGGCAGCGAAAUCAGCAGCCAGUAGAUUUGGUGCCAUCGCAGUGAUAAACAUAAAACUGCUGACCUUCAUGACAAAGUAAAUAUUGGACAUCAAAUAAGAGCCCGCUUUCUUUGCCGUAUCACCGGGUUCUGAUCCCAACGCUUUUACUACCGACAGGAUGAU | ....((((..........((.......)).....((......))..(((....)))....))))((.(((..((((...(((((((...(((((.((.......)).)))))....))))).))))))(((((............)))))...............((((((..((((..((((.....(((((((..................))))))))))).))))....))))))...))).))..... | [
"AL590842.1/92360-92612",
"CP007044.2/1824746-1824998"
] | [
"CAACGGCGGGAACAAUCAGCAGUAACAGCAAACCGGGAACAACCAUGGCCAGAGCCCAAACGCCCCAGUCAAGAUGAAUGCCCAGAAUUUUGGCAGCGAAAUCAGCAGCCAGUAGAUUUGGUGCCAUCGCAGUGAUAAACAUAAAACUGCUGACCUUCAUGACAAAGUAAAUAUUGGACAUCAAAUAAGAGCCCGCUUUCUUUGCCGUAUCACCGGGUUCUGAUCCCAACGCUUUUACUACCGACAGGAUGAU",
"CAACUGCGGGAACAAUAAGCAGUAAUACCAGGCCGGGAACUAUCAUGGCGAGAGCC... | rfam_14_5_mafft |
AL645882.2_1712074-1711860 | AACGACCGGUCGGACACGCACGCCCAUGGCAGCGGAUCCGGCCCACAAGUGGAGGCUUCGAACUCCCACCUGGCCGUCCUCCGGACGGCGGGUCACCGGUCAGGCGGUUCCGUCCCACGGCGGUGACCAGCCCGAAAUCGCGCCCCGCGGUCAUAGCGGCGGUGCUCCGGUAGCAGUUCGAGGAGCCCCGCCUGUGAUCGUCCGGGGCAUUUUUU | ...((((((..((........................))(((((.((.((((((........)).)))).))(((((((...)))))))))))).)))))).(((.(..(((((....)))))....).))).........(((((((((.....(((((((.(((((.............))))).))))).))..)))..))))))....... | [
"AL645882.2/1712074-1711860",
"CP010849.1/1715782-1715574",
"CP009438.1/1500961-1500758",
"CP006259.1/1958193-1957985",
"FN554889.1/8182035-8182246"
] | [
"AACGACCGGUCGGACACGCACGCCCAUGGCAGCGGAUCCGGCCCACAAGUGGAGGCUU-CGAACUCCCACCUGGCCGUCCUCC-GGACGGCGGGUCA-CCGGUCAGGCGGUU----CCGUCCCACGGCGGUGAC----CAGCCCGAAAUCGCGCCCCGC-GGUCA-UAGCGGCGGUGCUCCGGUAGCAGUUCGAGGAGCCCCGCCUGUG-AUCGUCCGGGGCAUUUUUU",
"AACGACCGGUCGGACACGUAUGCC--ACGGCAAGUGCCCGGCCCACAAGUGGAGGCUUCCGAACUCCCACCUGACCGCCC... | rfam_14_5_mafft |
AL645882.2_2982570-2982634 | CGCCCGGCCGGAUCCCGUGGGGGGAAUCCGCACCGGGACAUGGGAAGGCGCCCUGGAUCGUCGGC | (((((((.((((((((.....))).)))))..)))))....(((......)))........)).. | [
"AL645882.2/2982570-2982634",
"GG657757.1/3150859-3150921",
"CP009438.1/2867217-2867280",
"FN554889.1/6541171-6541108"
] | [
"CGCCCGGCCGGAUCCCGUGGGGGGAAUCCGCACCGGGACAUGGGAAGGCGCCCUGGAUCGUCGGC",
"CGCCCGGCCGGAUCCCGUGGGGGGAAUCCGUACCGGGAC-UGGGAAGGCGCCCUGG-CCGUCGGC",
"CGCCCGGCCGGAUCCCGUGGGGGGAAUCCGCACCGGGACAUGGGAAGGCGCCCUGG-UCGUCGGC",
"CGCCCGGCCGGAUCCCGUGGGGGGAAUCCGCACCGGGACAUGGGAAGGCGCCCUGC-UCGCCGGC"
] | rfam_14_5_mafft |
AL645882.2_4315358-4315484 | GAUAGGUCGCUGUCGCUACGGUGAUUGGACACUGACACUGAGUCAACUAGCCUUGUGCGCGCGGUUCUUCGCGCGCGGAACCGGAGGACGGUCCGAGCCACGAGGGGGGAGGCUCGGACCGUCCGUA | (((((....)))))((((..(((......)))((((.....))))..))))......(((((((....)))))))((....))...(((((((((((((.(......)..))))))))))))).... | [
"AL645882.2/4315358-4315484",
"HE971709.1/5094278-5094403",
"FN554889.1/5185358-5185483",
"BA000030.4/5240165-5240041",
"CP016438.1/5043231-5043107",
"CP006259.1/4361862-4361738"
] | [
"GAUAGGUCGCUGUCGCUACGGUGAUUGGACACUGACACUGAGUCAACUAGCCUUGUGCGCGCGGUUCUUCGCGCGCGGAACCGGAGGACGGUCCGAGCCACGAGGGGGGAGGCUCGGACCGUCCGUA",
"GAUAGGUCUCUGUCGCUACUGUGAUUGGACACUGACACAGAGUCAACUAGCCUUGUUCGCGCGGUUCUUCGCGCGCGGAACCG-AGGACGGUCCGAGCCACGAGGGGGGAGGCUCGGACCGUCCGUU",
"GAUAGCCCCCUGUCGCUACUGUGAUUGGACACUGACACAGAGUCAACUA... | rfam_14_5_mafft |
ALBB01000019.1_9215-9159 | ACACAAACAGAAUGAAAAGGAGCUGACGCAUUGUCGCUCCCUUUUGUCUAUUUUUUA | ........(((...((((((...((((.....))))...)))))).)))........ | [
"ALBB01000019.1/9215-9159",
"AZMH01000307.1/4324-4268"
] | [
"ACACAAACAGAAUGAAAAGGAGCUGACGCAUUGUCGCUCCCUUUUGUCUAUUUUUUA",
"ACACAAACAGAAUGAAAAGGAGCUGACACAUUGUCGCUCCCUUUUGUCUAUUUUUUA"
] | rfam_14_5_mafft |
AM180355.1_3631206-3631070 | AAUUUUAAUUAUGGCGACGUAGUCAUAAUUUUGAGUAUGUUACUGAUUAGCAGGCAGAACUCAAGUAUAUAUGUGAAAAAUAGAGGGAUACUCUAUACAUAUAUGCUUGAGUUCUUUUUAUUGAAGGGAGGAAUAUA | .((((.(((((((((......)))))))))..))))(((((.((..((..(((..(((((((((((((((((((.....((((((.....))))))))))))))))))))))))).....)))..))..))))))). | [
"AM180355.1/3631206-3631070",
"CP035499.1/602600-602736"
] | [
"AAUUUUAAUUAUGGCGACGUAGUCAUAAUUUUGAGUAUGUUACUGAUUAGCAGGCAGAACUCAAGUAUAUAUGUGAAAAAUAGAGGGAUACUCUAUACAUAUAUGCUUGAGUUCUUUUUAUUGAAGGGAGGAAUAUA",
"AAUUUUAAUUAUGGCGACGUAGUCAUAAUUUUGAGUAUGUUACUGAUUAGCAGGCAGAACUCAAGUAUAUAUGUGAAAAAUAGAGGGAUACUCUAUACAUAUAUGCUUGAGUUCUUUUUAUUGAAGGGAGGAAUAUA"
] | rfam_14_5_mafft |
AM180355.1_3894182-3893938 | CUUUUUUACGCAUAAUACACCACCUCCAUACAUUUUACUGUUCCUGUUAUAAUAGUGACAGGUAUAGAAAAACGUAUUGUAUAGUUGUACAGUUCCUAUUAUGCGUAUCAAAGAUAAAACUAUGCUGCUGAAACGGAAAUAAAAAAAACCGUUAUUUGGCAGUACACUUUUCUUGCGUCAAAAUCUCAUAAAUCUUUCCAGACGACGGUUUGACAAAAGCCGCCGUCUUUCUUUUUUCCAGAAUA | ((((..((..(.(((((..........((((.((((.((((.((((((((....)))))))).)))).)))).))))(((((....))))).....))))).)..))..)))).........(((((((((.((((............))))...)))))))))...................................(((((.((((((.....)))))).)))))................. | [
"AM180355.1/3894182-3893938",
"FP929062.1/366277-366033",
"KE992698.1/111149-110907",
"LGPD01000047.1/115341-115101",
"CP016318.1/3851403-3851159"
] | [
"CUUUUUUACGCAUAAUACACCACCUCCAUACAUUUUACUGUUCCUGUUAUAAUAGUGACAGGUAUAGAAAAACGUAUUGUAUAGUUGUACAGUUCCUAUUAUGCGUAUCAAAGAUAAAACUAUGCUGCUGAAACGGAAAUAAAAAAAACCGUUAUUUGGCAGUACACUUUUCUUGCGUCAAAAUCUCAUAAAUCUU---UCCAGACGACGGUUUGACAAAAGCCGCCGUCUUUCUUUUUUCCAGAAUA",
"CUUUUUUACGCAUAAUACACCACCUCUGUACAUUUUACUGUUCCUGUUAUAAUAGUGACAG... | rfam_14_5_mafft |
AM180355.1_916647-916747 | AAGGAAGAGAAAAAAGAAGAACAAUUAGAAGAAGAAAGAAGACUUAUGUAUGUUGCUAUUACAAGAGCUGAAGAAAAGUUAUGUAUAAGCUCUACUUUAAA | ...(((((((.........((((.....(((...........))).....))))(((..((((..((((.......)))).))))..)))))).))))... | [
"AM180355.1/916647-916747",
"DS995358.1/168950-169048",
"CP029566.1/42247-42347"
] | [
"AAGGAAGAGAAAAAAGAAGAACAAUUAGAAGAAGAAAGAAGACUUAUGUAUGUUGCUAUUACAAGAGCUGAAGAAAAGUUAUGUAUAAGCUCUACUUUAAA",
"GAUGAUGAUAAAAAAGAAUCUCAGAUAGAGGAAGAAAGAAGACUUAUGUAUGUAGCGGUUACAAGAGCGAAGAAUAAUGUUUGUAUAAGUUCUCCUAAA--",
"AAGGAAGAGAAAAAAGAAGAACAAUUAGAAGAAGAAAGAAGACUUAUGUAUGUUGCUAUUACAAGAGCUGAAGAAAAGUUAUGUAUAAGCUCUACUUUAAA... | rfam_14_5_mafft |
AM233362.1_37655-37769 | AUGAUACUAACUUAACGUCGGUAGUCAUUCCCGCGUAGGCGGGAAUCUCUUUAAUUGCUAUGAGGUCCCUGUGUCAAGCACGAGGAUUGUAAGUUAAAUCUCUAGUAUAAUUUUU | ..((((((.((.....)).))).)))((((((((....)))))))).........(((((.(((((((.(((((...))))).))))............))))))))........ | [
"AM233362.1/37655-37769",
"CP001633.1/1656095-1655981",
"ABXZ01000004.1/119791-119677",
"CP000915.1/19288-19402"
] | [
"AUGAUACUAACUUAACGUCGGUAGUCAUUCCCGCGUAGGCGGGAAUCUCUUUAAUUGCUAUGAGGUCCCUGUGUCAAGCACGAGGAUUGUAAGUUAAAUCUCUAGUAUAAUUUUU",
"AUGAUACUAACUUAACGUCGGUAGUCAUUCCCGCGUAGGCGGGAAUCUCUUUAAUUGCUAUGAGGUUCCUGUGUCAAGCACGAGGAUUAUAAGUUAAAUCUCUAGUAUAAUUUUU",
"AUGAUACUAACUUAAUAUCGGUAGUCAUUCCCGCGUAGGCGGGAAUCUCUUUAAUUGCUAUGAGAUCCCUGUG... | rfam_14_5_mafft |
AM747720.1_20581-20691 | AGUUCUGAUGCACCGCGAAACGAAUUUGCAGGUGGAGAACGAGGAGACAAUCGAGGCACAAAGUGCCCGGACCCCAAAGCGCUGUUGGACGGAAUCCAACAGCGCUUUUUC | .((((...(.(((((((((.....))))).)))).)))))..((.(....(((.(((((...))))))))..)))((((((((((((((.....))))))))))))))... | [
"AM747720.1/20581-20691",
"CP001503.2/65212-65322",
"BX571965.1/4054471-4054362",
"CP001043.1/3421169-3421068"
] | [
"AGUUCUGAUGCACCGCGAAACGAA-UUUGCAGGUGGAGAACGAGGAGACAAUCGAGGCAC-AAAGUGCCCGGACCCCAAAGCGCUGUUGGACGGAAUCCAACAGCGCUUUUUC",
"AGUUCUGAUGCACCGCGAAACAAAUUUUGCAGGUGGAGAACGAGGAGACAAUCGAGGCAC-AAAGUGCCCGG-CCCCAAAGCGCUGUUGGACGGAAUCCAACAGCGCUUUUUC",
"AGUUCUGAUGCACCGCGAAACGAAAUUUGCAGGUGGAGAACGAGGAGACAUUCGAGGCAC-AGAGUGCCCGA--UCG... | rfam_14_5_mafft |
AM747720.1_2136330-2136461 | AUGAAUGCCAGUUCGCCCCAUAUUUCUCGUAGCUGCGCCGGUGCCCGUUGCAAUGCUUCCCGGCACCUGACGCGCAUCACGACGGCAUCAGCCGAGCCGCAUGUCCCUGUCGACGGGGCAGCGGCUUUUUUU | ......(((((((((............)).))))).)).(((((.((((....((((....))))...)))).)))))....((((....))))((((((.((((((.......))))))))))))...... | [
"AM747720.1/2136330-2136461",
"BX571965.1/1703315-1703186",
"CP000614.1/1950012-1950143"
] | [
"AUGAAUGCCAGUUCGCCCCAUAUUUCUCGUAGCUGCGCCGGUGCCCGUUGCAAUGCUUCCCGGCACCUGACGCGCAUCACGACGGCAUCAGCCGAGCCGCAUGUCCCUGUCGACGGGGCAGCGGCUUUUUUU",
"AUGAAUGCCUGUCCGACCCAUUUUUCUCGUAGCUGCGCCGGUGGUCCAAACGAUGCGCCCACGCGCCUGACGCGCAGCACGACGGUUAAAGCCGAGCCGCUCGCCCCUGUU--CGGGGGAGCGGCUUUUUUU",
"AUGAAUGCCAGUUCGCCCCAUAUUUCUCGUAGCUGCGCC... | rfam_14_5_mafft |
AM747720.1_2545503-2545296 | CCCAUUUCGUGAAGGAAGUUCUGAGCGAAAUCAGGUGGCCGCAUAUAUUGCGAGCCAGAUAGGGCAGAACGCGCAGUCCGUGCAGACCACGGCAGAGUCGCAUUUGCGUUGCUCGAGGCGCAACCGAUACCGCCAAAGAGCCCGCCGCCCGAAGGCGCCCGCGUGCGCAUGAAAAAAGGCCUUCAUCUGGCGAUGAAGGCCUUUUACU | .(((((((((..(((....)))..)))))))..))((((((((.....)))).))))....((((.....((((...(((((.....)))))....).)))....(((..((((..((((..........))))...)))).))).))))....((((......)))).....((((((((((((((....))))))))))))))... | [
"AM747720.1/2545503-2545296",
"CP000614.1/2541404-2541198",
"CP002599.1/3281465-3281261",
"BX571966.1/506394-506600"
] | [
"CCCAUUUCGUGAAGGAA-GUUCUGAGCGAAAUCAGGUGGCCGCAUAUAUUGCGAGCCAGAUAGGGCAGA-ACGCGC-AGUCCGUGCAGACCACGGCAGAGUCGCAUUUGCGUUGCUCGAGGCGCAACCGAUACCGCCAAAGAGCCCGCCGCCCGAAGGCGCCCGCGUGCGCAUGAAAAAAGGCCUUCAUCUGGCGAUGAAGGCCUUUUACU",
"CCCAUUUCGCGAAGGAG-GUUCUGAGCGGAAUCCGGUGGCCGCAUAUGUUGCGAGCCAGAUAGGGCAGAGAAGCGC-AGUCCGUGCAGACCACGGU--... | rfam_14_5_mafft |
AM747720.1_2912201-2912283 | GUACGCGGCUGGUGUUGCCGGCGCGUCACCAUUCUCCUCUUGUCGUUGUUGCUCCGGGGCCGUAUCCGCCCCGGUUUUUUUUU | (((((((.(((((...)))))))))).))........................(((((((.......)))))))......... | [
"AM747720.1/2912201-2912283",
"CP001043.1/2459324-2459404",
"CP000270.1/1083868-1083788",
"FR687359.1/584945-584866"
] | [
"GUACGCGGCUGGUGUUGCCGGCGCGUCACCAUUCUCCUCUUGUCGUUGUUGCUCCGGGGCCGUAUCCGCCCCGGUUUUUUUUU",
"GUACGUGUGCGGCGAUGCCGCCGCGUCACCAUUCUCCUCUUGUCGUUGUUGCUCCGGGGC--CCAUAGCCCCGGUUUUUUUUG",
"GUACGUGGCUGGCGAAGCCGCCGCGUCACCAUUCUCCUCUUGUCGUUGUUGCUCCGGGGU--UAAUAACCCCGGUUUUUUUUG",
"GUGCGUG-GCGGCGAUACCGUUACGUCACCAUUCUCCUCUUGUCGUUG... | rfam_14_5_mafft |
AM747720.1_2967627-2967793 | UUAUGCUUGCGCACAUGAACCGCUUCCUGUCCGCUCUCCGACGUCGCCGCUCGCCGCUCCGCCCGGAUGCCGCCGGCUCGUCACGGACUCGCGCGUAACCCUCCUCCGCUUCAUCGGUUACGCACAAGCUGUUCGACCCACCAGCCACGGCCUUCCGUGGCUUUUUU | ....(.((.(((.(................(((.....(((.(((((.((...(..........)...)).)).))))))...)))....).))).......................................)).)....((((((((....))))))))..... | [
"AM747720.1/2967627-2967793",
"CP000614.1/2842482-2842648",
"BX571965.1/1080004-1079845",
"CP001503.2/3240439-3240593"
] | [
"UUAUGCUUGCGCACAUGAACCGCUUCCUGUCCGCUCUCCGACGUCGCCGCUCGCCGCUCCGCCCGGAUGCCGCCGGCUCGUCACGGACUCGCGCGUAACCCUCCUCCGCUUCAUCGGUUACGCACAAGCUGUUCGACCCACC-AGCCACGGCCUUCCGUGGCUUUUUU",
"UUAUGCUUGCGCACAUGAACCGCUUCCUGUCCGCUCUCCGACGUCGCCGCUCGCCGCUCCUCCCGGAUGCCGCCGGCUCGUCACGGACUCGCGCGUAACCCACCUCCGCUUCACCGGUUACGCACAAGCUGUUCGAUCCAC... | rfam_14_5_mafft |
AM747721.1_2304378-2304211 | AUGGCGCGACGACAAGUGCGCGCAACGAUUCCGCUUCCGACGCACAUAUGUCCAUGGCACGCAGGAAGCGAAUCCGGGACUCUCAACCCCCAUCGGGAGACCCGGAGCCCUGAGCGAACAUCCACGCGGCUGUGCACCGGCCCCGUGUGGAUGUUCGCUGAUUUUUUU | ...(((((((.....)).)))))........(((((((..((..(((......)))...))..)))))))..((((((.(((((..........))))).))))))....(.((((((((((((((((((((.....)))))..))))))))))))))).)....... | [
"AM747721.1/2304378-2304211",
"CP000615.1/2300283-2300117"
] | [
"AUGGCGCGACGACAAGUGCGCGCAACGAUUCCGCUUCCGACGCACAUAUGUCCAUGGCACGCAGGAAGCGAAUCCGGGACUCUCAACCCCCAUCGGGAGACCCGGAGCCCUGAGCGAACAUCCACGCGGCUGUGCACCGGCCCCGUGUGGAUGUUCGCUGAUUUUUUU",
"AUGACGCGAUGAAACAGGCGCGCAACGAUUCGGCUUCCGACGCACAUAUGUCAAUGGCACGCAGGAAGCAGAUCCGGGAUUCUCAACCCCCA-CGAGGAACCCGGAGCCCUGAGCGGACAUCCAUGCGGCUGUGCACCGGC... | rfam_14_5_mafft |
AM747721.1_2568766-2568918 | GCCGGACCGCGCUUCCGGUACAUCGCCUCCCCGCCCGCGCAGGAUCCCUGCGGGCACCCUCCGUCCUCCGGCGAUGUAUCCCGUGACUGGGCGAGCAGACACGGCGCGCGGGCCGAUUUUCCGCCCCGGACGUCCCCGUCCGGGGCUUUUUGU | ..(((.((((((....(((((((((((.....((((..(((((...)))))))))((.....)).....)))))))))))(((((.(((......))).))))).)))))).))).......((((((((((....))))))))))....... | [
"AM747721.1/2568766-2568918",
"JTDJ01000154.1/9146-8996"
] | [
"GCCGGACCGCGCUUCCGGUACAUCGCCUCCCCGCCCGCGCAGGAUCCCUGCGGGCACCCUCCGUCCUCCGGCGAUGUAUCCCGUGACUGGGCGAGCAGACACGGCGCGCGGGCCGAUUUUCCGCCCCGGACGUCCCCGUCCGGGGCUUUUUGU",
"ACCGGACUGCGCUUCCGGUCCAUCGCCACCCCGCCCGCGUUCGAUCCCUGCGGGCACUCCGU-CCCCCCGGCGAUGGGCUCCGUGACUGGGCGAGCAGACACGGCGCGCAGGCCGAUUUUCCGCCCCGGGC-UUCGCGUCCGGGGCGUUUUUG"
] | rfam_14_5_mafft |
AM778938.1_42341-42435 | AAAAAGUUUUCGGGGUUUGGGUUUACCCCAUUGACAGAUUUGCUUGAGUUCUCCUACAUAACUUAGCGCUACCUCGGCUGGACACCGAGGUUUUU | ............................................................(..........((((((.......))))))).... | [
"AM778938.1/42341-42435",
"AP009552.1/3915914-3915820"
] | [
"AAAAAGUUUUCGGGGUUUGGGUUUACCCCAUUGACAGAUUUGCUUGAGUUCUCCUACAUAACUUAGCGCUACCUCGGCUGGACACCGAGGUUUUU",
"AAAAAGUUUUCGGGGUUUGGGUUUGCCCCAUUGACAGAUUUGCUUGAGUUCUCCUACAUAACUUAGCGCUACCUCGGCUGGACACCGAGGUUUUU"
] | rfam_14_5_mafft |
AP006716.1_2609631-2609736 | AACAUGAUAGUAUUAGGGUGUAGUUAAUUAAUAACUACAAAGUCUUUUAUAUUCAUGAACAUAAUACUCCUGGGUGACGCCUUAACCCGACGUCACCCUCUUUUUA | ..(((((..((((.((((((((((((.....))))))))....)))).)))))))))..............((((((((...........))))))))........ | [
"AP006716.1/2609631-2609736",
"CVUF01000027.1/94633-94531",
"LTWW01000021.1/81501-81397",
"CP000029.1/43036-42934",
"AEUN01000498.1/22638-22537",
"CP000253.1/367225-367123",
"CP023966.1/2236122-2236224",
"CP041722.1/885520-885415",
"CP054017.1/2020481-2020378"
] | [
"-AACAUGAUAGUAUUAGGGUGUAGUUAAUUAAUAACUACAAAGUCUUUUAUAUUCAUGAACAUAAUACUCCUGGGUGACGCCUUAACCCGACGUCACCCUCUUUUUA",
"AAUCAUGAUACUAUUAGAGUGUAGUUAGU-AGUAACUACAAAGUCUUUUAUAUUCAUGAACAUAAUACUCCUGGAUGGCG---UAACCCAGCGCCAUCCUCUUUUUU",
"-UGCAUGAUACUAUUAACUUGUAGUUAUUUAAUAACUAC-AAGUCUUUUAUAUUCAUGAACAUAAUACUCCUGGAUGACGUCUUAACCC... | rfam_14_5_mafft |
AP008935.1_36809-37033 | AAAAGAACGCGUGCAAAAACCAUAAUCGACCUUCGUCGAUUUUUUUAUUUCAAAAUUAAAGAAACGGCUUGAGAUAUUCCGAGCAAUUAUAAAAAUUAAUUUGUCUUGAAUAUUGCUACUACAUUCUUGAAAAAGUGAUGUAGAUUUAUAGCCCAUAACUUUUUUUGAAUUACAUCGACGAUACGGCGUCGAAAGAAAAAUAAAUAGACCGUAUGAAAGAAAAAG | ......(((.((.........(.(((((((....))))))).).................(.((.(.(....).).)).)..(.(.(........((((......))))........).).)....(((((((((((..((.........)).)...))))).)))))......((((((......))))))...............)))))............. | [
"AP008935.1/36809-37033",
"CP000731.1/4022-3800",
"AE016833.1/9308-9519"
] | [
"AAAAGAACGCGUGCAAAAACCAUAAUCGACCUUCGUCGAUUUUUUUAUUUCAAAAUUAAA-GAAACGGCUUGAGAUAUUCCGAGCAAUUAUAAAAAUUAAUUUGUCUUGAAUAUUGCUACUACAUUCUUGAAAAAGUGAUGUAGAUUUAUAGCCCAUAACUUUUUUUGAAUUACAUCGACGAUACGGCGUCGAAAGAAAAAUAAAUAGACCGUAUGAAAGAAAAAG",
"AAAUCGACAUGUGCAAAAA-CGUAAUCGACCUUCGUCGAUUUUUUUAUUUCAAAAUUAAA-GAAACGGCUUGAGAUAUUCCGA... | rfam_14_5_mafft |
AP009044.1_10054-9921 | GUUGUGAUUGCAGUGACUGAUGUGGUUUUCGGUUUCUGUGGAGGAAGGGUUGCAACGCUUUUUCAAGAGAAUGACCGCGCGUCCGCUUAAAUCGAAGCGUUGAACGCCGGUCUUUUCUCAUUUCACUUAAGAUA | ...((((..((((.((((((........)))))).)))).(((((((.((....)).)))))))..(((((.(((((.((((((((((......)))))..).)))))))))..)))))...))))........ | [
"AP009044.1/10054-9921",
"BA000036.3/10053-9921"
] | [
"GUUGUGAUUGCAGUGACUGAUGUGGUUUUCGGUUUCUGUGGAGGAAGGGUUGCAACGCUUUUUCAAGAGAAUGACCGCGCGUCCGCUUAAAUCGAAGCGUUGAACGCCGGUCUUUUCUCAUUUCACUUAAGAUA",
"GUUGUGAUUGCAGUGACUGAUGUGGUUUUCAGUUUCUGUGGAGGAAGGGUUGCAACGCUUUUUCAAGAGAAUGACCGUGCGUCCGCUUAAA-CGAAGCGUCGAACGCCGGUCUUUUCUCAUUUCACUUAAGAUG"
] | rfam_14_5_mafft |
AY145471.1_67691-67890 | CAUUUUCAGCGACGUAUAUUGACAAAUAUACUACAGUCGGACGUUUGUGCCGACAUAUAUACUACACUUUACCAAAAAUAUACUACACUAAACUCUAAAUAUACUACAACUCCGCUUCAAUAUAACUAUACUCUCGUAAAACGGCCUAAAAAUAUCGAAAUAUAUGGGGUAAAUACACGUUUGAAAAACGCUACGAUUCC | .......((((..(((((((....)))))))....(((((((....)).)))))................................................................................(((......((((....((((....))))...))))......))).........))))........ | [
"AY145471.1/67691-67890",
"EF125867.1/55368-55567",
"AP009046.1/67624-67425",
"DQ813662.2/65102-64903"
] | [
"CAUUUUCAGCGACGUAUAUUGACAAAUAUACUACAGUCGGACGUUUGUGCCGACAUAUAUACUACACUUUACCAAAAAUAUACUACACUAAACUCUAAAUAUACUACAACUCCGCUUCAAUAUAACUAUACUCUCGUAAAACGGCCUAAAAAUAUCGAAAUAUAUGGGGUAAAUACACGUUUGAAAAACGCUACGAUUCC",
"CAUUUUAAGAGGCGUAUAUUAACAAAUAUACUACAGUCGGACGUUUGUGCCAACAUAUAUACUACACUGUACCAAAAAUAUACUACACUUGCUUCAAAAUAUACUACAA... | rfam_14_5_mafft |
AY661566.1_11179-11773 | ACCAGGUUCGUGGUGGUGCGGUGCAGGAAGUCGGUGCGGGCACACCGGAUUUCGCGGUGUGCCCGUGCGACCUUGGUCUUGGCUUUGCGGCGGUUGUUCGAGCCCUUCUGCUUGCGGGCCAUUUGCCGCUGGUAGCGGGCGAGGUUGCGGGCCUUGCGGUCCAGAUGCUUCGGGUUGGCGAUCUUCUCGCCUGUCGACAGGACAGCAAAGUCCUUCACACCCAGGUCCACCCCGACCGCGCUGCCGGUCUCGGGCUGCGGUUCGGGGUCGUCGGUGUCCACGGCCAAGGUCACAUACCAGCGGCCAUCCGGCUCGCGGGA... | .(((.........)))(.(.((..(.....)........((.(..((.(((....))).))...).))(((((((.((...(((..(((((((.(((.(((((......)))..)).).)).))))))).)))...)).)))))))..((((.((((.((((.(.(...(.((....(.((...)).).)).)...)).)))).)))).))))......(..((((...(((((((((((...((......))..))))).)))))).((...(((((..((((..(.((....(((((((((((.(...((.((..(((... | [
"AY661566.1/11179-11773",
"AM420293.1/5112242-5112836"
] | [
"ACCAGGUUCGUGGUGGUGCGGUGCAGGAAGUCGGUGCGGGCACACCGGAUUUCGCGGUGUGCCCGUGCGACCUUGGUCUUGGCUUUGCGGCGGUUGUUCGAGCCCUUCUGCUUGCGGGCCAUUUGCCGCUGGUAGCGGGCGAGGUUGCGGGCCUUGCGGUCCAGAUGCUUCGGGUUGGCGAUCUUCUCGCCUGUCGACAGGACAGCAAAGUCCUUCACACCCAGGUCCACCCCGACCGCGCUGCCGGUCUCGGGCUGCGGUUCGGGGUCGUCGGUGUCCACGGCCAAGGUCACAUACCAGCGGCCAUCCGGCUCG... | rfam_14_5_mafft |
BA000012.4_4551188-4550877 | UGGUUUUCCCUGCCUCCGCUCGCGGUCCGCUGGCAUUUGCCAGCAACCCGUCAAGCGUCAUAACAUAUACCACUUGCGGUAUAGCAACCAUCAAAGAUCGCAUUUGACAGUUAUGGCAAAAGGACGGCAACGUCAGCGCGUUCCGAGACGCAACGGUCGCCGACGAUAAAAUCGUAUCGAUUGAAAUCAGCGGCUCGGGGCCAUGGGAGGAUACCGGAGAUCGAUAUGACGGCAGCAGUGCCUUGGCGCUUCUGCACGAUUGCGCGGCCCGCGACCCCCGGGGUGCUGCGUCCAUCAACCAGGGAGAGUUAC | .................((....(...........................)..))....................(......(((((..(((((.......)))))..)))...)).....)..............(((((....)))))..((((((....(((.....)))...))))))........(.(....).)...(((......................(((...............((....))....))).....)))......(((((((((.......))))..)).)))........ | [
"BA000012.4/4551188-4550877",
"CP002447.1/6190604-6190914"
] | [
"UGGUUUUCCCUGCC-UCCGCUCGCGGUCCGCUGGCAUUUGCCAGCAACCCGUCAAGCGUCAUAACAUAUACCACUUGCGGUAUAGCAACCAUCAAAGAUCGCAUUUGACAGUUAUGGCAAAAGGACGGCAACGUCAGCGCGUUCCGAGACGCAACGGUCGCCGACGA-UAAAAUCGUAUCGAUUGAAAUCAGCGGCUCGGGGCCAUGGGAGGAUACCGGAGAUCGAUAUGACGGCAGCAGUGCCUUGGCGCUUCUGCACGAUUGCGCGGCCCGCGACCCCCGGGGUGCUGCGUCCAUCAACCAGGGAGAGUUAC"... | rfam_14_5_mafft |
BA000012.4_6385458-6385600 | CUCGUUCGCGGCAGCGUGCCCCGGUGCCGCCAUCAGAAGGGCCAGAAGAAUCGCCCGGCAGGCCCGGCCGGGCGGGAAAAGAAAGCGCGUCGAAGAAAAGCCCGCUGGCCCAGGAAAGCGCAUGGCGGGAAGUAUGGCCGAUA | ..(((((..(((.(.......(((((.........................)))).....).)...))))))))............((...........(((....))).........(((...))).........))..... | [
"BA000012.4/6385458-6385600",
"CP002447.1/4989891-4989749"
] | [
"CUCGUUCGCGGCAGCGUGCCCCGGUGCCGCCAUCAGAAGGGCCAGAAGAAUCGCCCGGCAGGCCCGGCCGGGCGGGAAAAGAAAGCGCGUCGAAGAAAAGCCCGCUGGCCCAGGAAAGCGCAUGGCGGGAAGUAUGGCCGAUA",
"UUCGUCGGCGGCAGCGUGAUGCGGCGCCAGCAUCAGAAGGGCCAAAAGGAGCGCCCGGCGGAUCCGGCCGGGCGGGAAAAGAAAGCGCGUCGAUGAAAAGCCGGCUGGCCCAGGAAAGCGCAUGGCGUGAAGUAUGGCCGAUA"
] | rfam_14_5_mafft |
BA000018.3_667081-666886 | ACACAUUGAAUAUCGAAACAUUUAAUUGCGCUAAAUCGUUUCAUUAAAUAAAUUACCUUGUAUUGGCGAUUAAAUUAAGGUAAAUUAUAAAAAAUGCUGAUAUUUUUGACUAAACCAAAUGCUAACCCAGAAAUACAAUCACUGUGUCUAAUGAAUAAUUUGUUUUAUAAACACUUUUUUGUUUACUUCUCAUUUU | (((((.(((.....((((((((((.......))))).))))).....((((.((((((((.(((........))))))))))).)))).........((.((((((((...................)))))))))).))).)))))....................((((((......))))))........... | [
"BA000018.3/667081-666886",
"AFNP01000009.1/55570-55765",
"ACYP01000011.1/51240-51045",
"AF515775.1/506-701",
"ADAT01000016.1/51268-51073",
"FR821777.2/648133-647938"
] | [
"ACACAUUGAAUAUCGAAACAUUUAAUUGCGCUAAAUCGUUUCAUUAAAUAAAUUACCUUGUAUUGGCGAUUAAAUUAAGGUAAAUUAUAAAAAAUGCUGAUAUUUUUGACUAAACCAAAUGCUAACCCAGAAAUACAAUCACUGUGUCUAAUGAAUAAUUUGUUUUAUAAACACUUUUUUGUUUACUUCUCAUUUU",
"ACACAUUGAAUAUUGAAACAUUUAAUUGCGCUAAAUCGUUUCAUAAAAUAAAUUACCUUAUACUGACGAUUAAAUUAAGGUAAAUUAUAAAAAAUGCUGAUAUUUUUGACUAA... | rfam_14_5_mafft |
BA000019.2_323243-323301 | AAGAUUAAAGCCUGGAAGCAAUCCCCAGGGAAAACCUUAGAGGAGUCAAAACUAUGACA | ..........(((((.(....).).)))).....((.....)).((((......)))). | [
"BA000019.2/323243-323301",
"CP000117.1/3815774-3815717"
] | [
"AAGAUUAAAGCCUGGAAGCAAUCCCCAGGGAAAACCUUAGAGGAGUCAAAACUAUGACA",
"AAGAUUAAAGCCUGGAAGCGAUUCGCA-GGAAAACCUUAGAGGAGUCAAAGAUAUGACA"
] | rfam_14_5_mafft |
BA000025.2_106547-106465 | UGGGAGUGGUAAUGAUGAUCUGGUUGGACAAGAGUCUCUGAGCUUUUCUCUGAGGAUCUUUGAACCCACCUGAUCCACCUUCA | ..(((((((........(((.(((.((..((((.((((.(((.....))).)))).))))....)).))).)))))).)))). | [
"BA000025.2/106547-106465",
"CAEC01451444.1/3050-3132",
"ABGA01191011.1/5367-5285",
"AANU01173885.1/1048-969",
"AL773527.8/126210-126129",
"AAQR03056232.1/1977-2058"
] | [
"UGGGAGU--GGUAAUGAUGAUCUGGUUGGACAAGAGUCUCUGAGCUUUUCUCUGAGGAUCUUUGAACCCACCUGAUCCACCUUCA",
"UUGGAGU--GGUAAUGAUGAUCUGGUUGGACUAGAGUCUCUGAGCUUUUCUCUGAGGAUCUUUGAACCCACCUGAUCCACCCUCA",
"UGGGAGU--GGUAAUGAUGAUCUGCUUGGACAAGAGUCUCUGAGGUUUUCUCUGAGGAUCUUUGAACCCACCUGAUCCACCUUCA",
"UUGGAGU--GGUA---AUGAUCUGGUUGGACUAGAGUCUCUG... | rfam_14_5_mafft |
BA000034.2_1598159-1597984 | CGUUUCCUUCCUUAACACUAUCGACUCCAUAAUGACCCAUCAGUCAAACGGUAUAUCUCAAACGACUACGGUUUACUCCAAAUUCAUUGGCUAGUUGAGGCCAAGAAACACCUGAUUUUUUUAAUGCUAAAUUUCUAGCUUAUCUUCAUAGCUUAAUUUCAUACAAAAAAACCCCA | .(((((...(((((((................((((......))))(((.(((..((......)).))).)))....((((.....))))...)))))))....)))))......((((((..(((..(((((...((((.........)))).))))))))..))))))...... | [
"BA000034.2/1598159-1597984",
"CP000017.1/307383-307557",
"CP000829.1/308505-308680"
] | [
"CGUUUCCUUCCUUAACACUAUCGACUCCAUAAUGACCCAUCAGUCAAACGGUAUAUCUCAAACGACUACGGUUUACUCCAAAUUCAUUGGCUAGUUGAGGCCAAGAAACACCUGAUUUUUUUAAUGCUAAAUUUCUAGCUUAUCUUCAUAGCUUAAUUUCAUACAAAAAAACCCCA",
"UGUUUCCUUCCUUAACACUAUCGACUCCAUAAUGACCCAUCAGUCAAACGGUAUAUCUCAAACGACUACGGUUUACUCCAAAUUCAUUGGCUAGUUGAGGCCAAGAAACACCUGA-UUUUUUAAUGCUAAAUU... | rfam_14_5_mafft |
BA000037.2_1092839-1092715 | UUAUACCCAAACAACUUGAAGUUGCAGGUAGGCGGCAAAUGAGUGAAUCCCCAUGAGCAUAGAUACGCUAUGUGAUUGGGGUGAACGAAUGCAGCCAACACCGCUGCAGCUUCAAGUAGGAAGGG | .(.(.((......((((((((((((((((..(((.((..(.(((..............................))).)..))......))).......)))..))))))))))))).)).).). | [
"BA000037.2/1092839-1092715",
"ACZO01000006.1/837894-838014"
] | [
"UUAUACCCAAACAACUUGAAGUUGCAGGUAGGCGGCAAAUGAGUGAAUCCCCAUGAGCAUAGAUACGCUAUGUGAUUGGGGUGAACGAAUGCAGCCAACACCGCUGCAGCUUCAAGUAGGAAGGG",
"CUAUACCCAAACAACUUGGAGUUGCAGGUAGGCGGCAAGUGAGUUCAUCCCCAUGAGCAUAGACGGGCUAUGUGAUUGGGGUGAACGAACGCAGCC----CCCCUGCAGCUUCAAGUAGGAAGGG"
] | rfam_14_5_mafft |
BAAU01002956.1_45-101 | GCGGAUGCCCUGGCAGGGUCGCACCGCUCAAACAAAGCGGCCCCGCCCCACUACCCC | ((((........[..[[[.[[[.)))).........]]].]]]..]........... | [
"BAAU01002956.1/45-101",
"FP929046.1/2709291-2709238",
"ADJT01006524.1/158-102",
"BAAX01004489.1/313-261",
"AECU01000219.1/25219-25167",
"BABD01005494.1/1196-1144",
"BAAX01004210.1/763-710",
"AECU01000219.1/23601-23548",
"BABA01026356.1/119-67",
"BAAU01015012.1/482-430"
] | [
"GCGGAUGCCCUGGCAGGGUCGCACCGCUCAAACAAAGCGGCCCCGCCCCACUACCCC",
"UGGGAUACCCUAGCAGGGCCGCACCCCA---GAAAAGCGGCCCCGCCCCACACCCGG",
"GCGGAUGCCCUGGCAGGGUCGCACCGCUCAAACAAAGCGGCCCCGCCCCAUAACCCC",
"ACGGAGACCCCAGCAGGGCCGCACCGC----UCAAAGCGGCCCCGCCCCACUUCCCA",
"ACGGAGACCCCAGCAGGGCCGCACCGC----UCAAAGCGGCCCCGCCCCACUUCCCA",
"... | rfam_14_5_mafft |
BAAU01010303.1_537-465 | GCUCGUCUGGGCGAGGGUAAAUAGUAAUUAGGCCCAGAGCGUCUUGGCCGGGAGCUGCCGGUCAGGGGUUUAG | .(((..[[[[[.))).........(((.....]]]]]....(((((((((........)))))))))..))). | [
"BAAU01010303.1/537-465",
"BAAU01005155.1/240-168",
"BAAV01005253.1/703-639"
] | [
"GCUCGUCUGGGCGAGGGUAAAUAGUAAUUAGGCCCAGAGCGUCUUGGCCGGGAGCUGCCGGUCAGGGGUUUAG",
"GCUCGUCUGGGCGAGGGUAAAUAGUAAUUAGGCCCAGAGCGUCUUGGCCGGGAGCUGCCGGUCAGGGGUUUAG",
"ACUCGUCUGGGCGAGUAUAAAUAGUAAUUAGGCCUAGAGCGUC----CCGGUAGCUGCCG----GGGGGUUAG"
] | rfam_14_5_mafft |
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