id
stringlengths
12
30
sequence
stringlengths
12
4.38k
secondary_structure
stringlengths
12
4.38k
aligned_ids
listlengths
1
10
aligned_sequences
listlengths
1
10
split
stringclasses
4 values
URS0000D69FEF_12908_1-94
CGCAACGGUAGAGGCCUCGAUCCUCGCCCCAUUAGAACGCGCGGCACCCGACCGGGGGCGGGAGGAGCCAGUGGUGCGACCGGCUACCUCUAGG
(..(..(((((.(((.......(((((((.............[[[[[[.......)))))))....)))...]]]]]..]...)))))..)..)
[ "URS0000D69FEF_12908/1-94", "URS0000D6BB35_12908/1-91", "URS0000D6A516_12908/1-94" ]
[ "CGCAACGGUAGAGGCCUCGAUCCUCGCCCCAUUAGAACGCGCGGCACCCGACCGGGGGCGGGAGGAGCCAGUGGUGCGACCGGCUACCUCUAGG", "-ACAACGGUAGAGGCUUAGAUGCCCGCCCCGUAAAAGAGCGUGGCACCCA--CGGGGGUGGGCGGAGUCAGUGGUGCGACCGGCUACCCCCAGG", "GGACAAGGUAGAGGCUUGGAUCUCCGCCCGAUUAGAACGCGUGGCACCCGACCGGGGGCGGGAGGAGCCAGUGGUGCGACCGGCUACCUCCAGG" ]
rfam_14_5_mafft
URS0000D69FF0_12908_1-166
UCUACACAAGUAUGCCUACUUGAUCACCAGGAUGAUUCAGAGCUUGUGUAGAACAACUAAAUAAUGUCAGCGGUCUUACUGAAUGAGGCAGCUGCAAGUAACAAAAUGAAGGAAUUCUUCAUUUUUAGCUUGUAGUGGCUUUGCUAUGCCUCGUUUUAGCUGAAUU
(((((.(((((.(.(((...........)))...[[[[[[)))))).)))))...............((((.(.....]]]]]]......(((((.........(((((.........)))))........)))))....................).))))....
[ "URS0000D69FF0_12908/1-166", "URS0000D69FF0_1261061/1-166", "URS0000D6925F_1261059/1-165", "URS0000D6925F_682147/1-165", "URS0000D667B4_879295/1-162", "URS0000D69786_12908/1-159" ]
[ "UCUACACAAGUAUGCCUACUUGAUCACCAGGAUGAUUCAGAGCUUGUGUAGAACAACUAAAUAAUGUCAGCGGUCUUACUGAAUGAGGCAGCUGCAAGUAACAAAAUGAAGGAAUUCUUCAUUUUUAGCUUGUAGUGGCUUUGCUAUGCCUCGUUUUAGCUGAAUU", "UCUACACAAGUAUGCCUACUUGAUCACCAGGAUGAUUCAGAGCUUGUGUAGAACAACUAAAUAAUGUCAGCGGUCUUACUGAAUGAGGCAGCUGCAAGUAACAAAAUGAAGGAAUUCUUCAUUUUUAGCUUGUAGUGGCUUUG...
rfam_14_5_mafft
URS0000D69FF7_12908_1-100
GUAGCGGUAUUGUAAGUCCCGGAUCGGCUGGGUGUUCGUAGAACACCCCACUCCGCCCCGCAGUGGGCGGUGGUCAUCGGCCCCCAGGCAGAGCCGCUAU
(((((((..((......((.((...(((....(((((...)))))............(((...))).............))).)).))..)).)))))))
[ "URS0000D69FF7_12908/1-100", "URS0000D6C52F_12908/1-95" ]
[ "GUAGCGGUAUUGUAAGUCCCGGAUCGGCUGGGUGUUCGUAGAACACCCCACUCCGCCCCGCAGUGGGCGGUGGUCAUCGGCCCCCAGGCAGAGCCGCUAU", "AAAGCGGUAUCGUAAGUCCUGGAGCGGCUGGGUGUUCGUAGAACACCCCACUCUGCU-----GCAAGCGGUGGUUAUCGGCUCCCAGGCAGAGCCGCUAU" ]
rfam_14_5_mafft
URS0000D6A00C_421052_1-175
CCCACACAGUUCAUCGAGUGUGAAUAGGAUAUGCAGGAAAGUGAAAAUCUAAAUUGGGAGUGAUGCCCCACACAAAAUUGAAUGAUGAAACUGAAAAGUAAAGAAUACUGUGCCUAUUCAGUGGUUCUUUAAAGUAGGGAGUAGCUAUGGGCCACAGCAUAGAUCUUCUGUGGUA
..(((((..........))))).(((((..............................................................[[.[....[[[[[[[[[[....)))))...]].]]]]]]]]...].]]............((((((............)))))).
[ "URS0000D6A00C_421052/1-175", "URS0000D6C5FB_421052/1-174", "URS0000D6C8DA_12908/1-175" ]
[ "CCCACACAGUUCAUCGAGUGUGAAUAGGAUAUGCAGGAAAGUGAAAAUCUAAAUUGGGAGUGAUGCCCCACAC-AAAAUUGAAUGAUGAAACUGAAAAGUAAAGAAUACUGUGCCUAUUCAGUGGUUCUUUAAAGUAGGGAGUAGCUAUGGGCCACAGC-AUAGAUCUUCUGUGGUA", "CCCACACAGUUCAUCGAGUGUGAAUAGGAUAUGCAGGAAAGUGAUAAUCUGAAUUGGGAGUGAUGCCCCACCA-UAAAUUGAAUGAUGAAACCG-AAAGUAAAGAAUACUGUGCCUAUUCAGUGGUUCUUUA...
rfam_14_5_mafft
URS0000D6A029_1332071_1-75
GGUGCGAUCGGAAUCUGCAGCGAUGCGGAGCCCUGUGGCAGGGGCGUGCCAUACACCAACCGAAAGUAAUGGAGA
((((((.......((((((....))))))...............))))))..........(....).........
[ "URS0000D6A029_1332071/1-75", "URS0000D6A029_1332070/1-75" ]
[ "GGUGCGAUCGGAAUCUGCAGCGAUGCGGAGCCCUGUGGCAGGGGCGUGCCAUACACCAACCGAAAGUAAUGGAGA", "GGUGCGAUCGGAAUCUGCAGCGAUGCGGAGCCCUGUGGCAGGGGCGUGCCAUACACCAACCGAAAGUAAUGGAGA" ]
rfam_14_5_mafft
URS0000D6A02D_1274722_1-127
CUGAACUGAUGCCGAGGCAGGCGUAAGCCUGGGGGAAUUACCUGUGAAAGCAGGCAGCUGCACUGAGUGCACCACUGAACCCUUCAACACCUCAACUGCACCCUCUCUGGCGCACAGGCAUCUUUCA
.((((..((((((....(((((....)))))((((.....(((((....)))))(((.(((((...)))))...)))..)))).................................)))))).))))
[ "URS0000D6A02D_1274722/1-127", "URS0000D69BFD_1144320/1-126", "URS0000D67DD0_12908/1-126" ]
[ "CUGAACUGAUGCCGAGGCAGGCGUAAGCCUGGGGGAAUUACCUGUGAAAGCAGGCAGCUGCACUGAGUGCACCACUGA-ACCCUUCAACACCUCAACUGCACCCUCUCUGGCGCACAGGCAUCUUUCA", "CUGAAUUGUUGCCGAGGCAGGCAUAGGCCUGGGG--AUUACCUGAAAUAGCAGGCAGUUGCACUGAGUGCAUCACUGACACCCCGAAAUACCUCAACUGCACCCGCUCUGGCGCACAGGCAACUUUCA", "CUGAAUUGUUGCCGAGGCAGGCAUAAGCCUGGGG--AUUACCUGCAU...
rfam_14_5_mafft
URS0000D6A033_12908_1-94
CCCCUGACUGUAUGGCAGGGUGCACUCUCCUUCGGGAGGGCCGAAGAAUGUUAAACUUCAGAAAUCAAACAACGAAAUGGCAAAUUUAGUAGCU
.(((((.........))))).....((((((..)))))).(.((((.........)))).).................(..............)
[ "URS0000D6A033_12908/1-94", "URS0000D6598C_688246/1-91", "URS0000D65873_12908/1-82" ]
[ "CCCCUGACUG-UAUGGCAGGGUGCACUCUCCUUCGG-----GAGGGCCGAAGAAUGUUAAACUUCAGAAAUCAAAC-AACGAAAUGGCAAAUUUAGUAGCU", "CCCCUGACUG-UAGUGCAGGGCGCACUCUCGUACAACGCGCGAGGGCCGAAGAAUGUUAAACUUCAGAAAUCAAACAAACAGAAUGUCAAAU---------", "CCCUUGACCGUUAUGGCAAGGCGCACUCUC-UAAGACAUA-GAGGGCCGAAGAAUGUUAAACUUCAGUAAUCAAAC-AACAGAAU----------------...
rfam_14_5_mafft
URS0000D6A035_12908_1-275
AAGAUUGAAGCAACCAGGAAAGUUCAGGUGCAGUAAUGGGGCGGUUCACAAGUGACAUGGUGGUCAGGCUGCUGAAUGGCAGACAGAGUGAAUGCAGAAUAAACAAGACCUGACAAAACAGUUGAAGAAACCAGGAACAAUAAGUCAAUGAAGCAAAGUGUUCUGCACUAUUUGAAGAAAGCAGGCAGGAUGAACCAAACAUCACUUCAAACUUAAACCAAGAAGUUGUUAAGGGGGAAGAAUCAACAAGGGAGAGGACACAGCACUUCAAUCUU
((((((((((.............((((((..............((((((...((((......))))..((((......)))).....))))))..............)))))).......(((((.....((...((((((((((....((((.....(((.((((..............))))))).((((.......)))).))))..))))..........))))))..))........)))))..................))))))))))
[ "URS0000D6A035_12908/1-275", "URS0000D6627E_12908/1-268", "URS0000D6A3E9_12908/1-274", "URS0000D6B8F3_12908/1-274", "URS0000D67E6A_12908/1-274", "URS0000D692DA_12908/1-272", "URS0000D67A8A_12908/1-273" ]
[ "AAGAUUGAAGCAACCAGGAAAGUUCAGGUGCAGUAAUGGGGCGGUUCACAAGUGACAUGGUGGUCAGGCUGCUGAAUGGCAGACAGAGUGAAUGCAGAAUAAACAAGACCUGACAAAACAGUUGAAGAAACCAGGAACAAUAAGUCAAUGAAGCAAAGUGUUCUGCACUAUUUGAAGAAAGCAGGCAGGAUGAACCAAACAUCACUUCAAAC-----------UUAAACCAAGAAGUUGUUAAGGGGGAAGAAUCAA-CAAGGGAGAGGACACAGCACUUCAAUCUU--------", "AAGAUUGAAGCAAC...
rfam_14_5_mafft
URS0000D6A03E_12908_1-54
CGGCGGCCGCAGGCCGGAUAUACUGCGGUGUGCGGCCCAUGGCCGCAGGAAAGG
.....((((((............)))))).((((((.....)))))).......
[ "URS0000D6A03E_12908/1-54", "URS0000D671A0_12908/1-54", "URS0000D6CF03_12908/1-54", "URS0000D67561_12908/1-54" ]
[ "-CGGCGGCCGCAGGCCGG-AUAUACUGCGGUGUGCGGCCCAUGGCCG--CAGGAAAGG", "-CGGCGGCCGCAGGCCGG-ACACUCUGCGGCGUGCGGCACAGCGCCG--CAGGAAAGG", "CGGCCCGCCGCAGGCCGGUAUAUGCGGC----UCCGGCCCCAGGCCGGACGGGGAAGG", "CGGCCCGCCGCAGGCCGGUAUAUGCGGC----UCCGGCCCCAGGCCGGACGGGAAAGG" ]
rfam_14_5_mafft
URS0000D6A04D_12908_18-78
GCUGUAAUGCUACCACAUACACGGUGAGAGUUCCAAGUCUCUAUUAAAAGCAGAGGACAGC
((((...(((((((((.......)))[[[..{{{..)).]]]......))))..}}}))))
[ "URS0000D6A04D_12908/18-78", "URS0000D66598_12908/19-77", "URS0000D66542_12908/1-55" ]
[ "GCUGUAAUGCUACCACAUACACGGUGAGAGUUCCAAGUCUCUAUUAAAA--GCAGAGGACAGC", "GCUGUAAUGACACCACCAAAGCGGUGAGCGUUCCAAGUCGCU----GAAAGUCAGAGGACAGC", "GCUAUAAUGCAACCUU--------UGAGAGUUCCAAGUCUCUAUGAAAAAUGCAGAGGAUAGC" ]
rfam_14_5_mafft
URS0000D6A052_12908_1-98
AUAAUGAUACACUUGCAUAGCCACAGCUCGAGCGUGAUAAAACCGUCACAAGCAAUGGGUGCAACUCGGACAUAGUCGGAGUGGUGAAAUUCCAGUGG
............((((((........................................))))))(((.(((...))).)))(((.......)))....
[ "URS0000D6A052_12908/1-98", "URS0000D67F4B_12908/1-98", "URS0000D6B96D_12908/1-98" ]
[ "AUAAUGAUACACUUGCAUAGCCACAGCUCGAGCGUGAUAAAACCGUCACAAGCAAUGGGUGCAACUCGGACAUAGUCGGAGUGGUGAAAUUCCAGUGG", "AUAAUGAUACACUUGCAUAGCCACAGCUCGAACGUGAUAAAACCGUCGCAAGCAAUGGGUGCAACUCGGACAGAGUCGGAGUGGUGAAAUUCCAGUGG", "AUAAUGAUACACUUGCAUAGCCACAGCUCGAGCGUGAUAAAACCGUCGCAAGCAAUGGGUGCAACUCGGACAGAGUCGGAGUGGUGAAAUUCCAGUGG" ]
rfam_14_5_mafft
URS0000D6A058_12908_1-46
AGGGGAAAAAUGCAGUCUCCCCUUGAGACCACGGUCCAAGCGCUGC
((((((.....[[[[[.))))))...(((....))).....]]]]]
[ "URS0000D6A058_12908/1-46", "URS0000D6BD19_12908/1-44", "URS0000D68819_12908/1-45" ]
[ "AGGGGAAAAAUGCAGUCUCCCCUUGAGACCACGGUCCAAGCGCUGC", "--AGGGGAAAGGCAGUCUCCCCUUGAGACCACGGUCCAAGCGCUGC", "-AGGGGAAAAUGCAGUCUCCCCUUGAGACCCCGGUCCAAGCACUGC" ]
rfam_14_5_mafft
URS0000D6A05F_12908_1-90
GAGAGGAGGCCCCAACUGCUGAACAGCAGCAUUUCUGUAAUGGGGAUGACGACAUGCCGCCGGAGCGCAGCUGAGGGGGCGAUACUAUUA
.......(.((((...(((((.....)))))..........)))).).......((((.((..((.....))..)).)))).........
[ "URS0000D6A05F_12908/1-90", "URS0000D69A4E_12908/1-90" ]
[ "GAGAGGAGGCCCCAACUGCUGAACAGCAGCAUUUCUGUAAUGGGGAUGACGACAUGCCGCCGGAGCGCAGCUGAGGGGGCGAUACUAUUA", "GAGAGGAGGCCCCAAAUGCUGCGCAGCAGCAUUGCUGUAAAGGUGCCGACGACAUGCCGCCGAAGCGCAGCUGAGGGGGCGAUACGACAG" ]
rfam_14_5_mafft
URS0000D6A065_12908_1-81
CCACAGCCAGGUUGGCCCUUCGGGGGAUGCCUGGACGCUGAUAAGCCAGUAGUGCAGCGCUACGGGAAAAUACCGGCAGCC
(((...[[[[[.)))(((....)))....]]]]].(((((....[[[.[.....))))).............].]]]....
[ "URS0000D6A065_12908/1-81", "URS0000D68CC4_1196325/1-80", "URS0000D6CBE6_1196325/1-80" ]
[ "CCACAGCCAGGUUGGCCCUUCGGGGGAUGCCUGGACGCUGAUAAGCCAGUAGUGCAGCGCUACGGGAAAAUACCGGCAGCC", "CCACUGCCAGUGUGGCCC-GAAAGGGAUAACUGGACGCGGAUAAGCCGGUAGUGCCGCGAUGCAGGAAAACACCGGCAGCC", "CCACUGCCAGCGUGGCCC-GAAAGGGAUAACUGGACGCGGAUAAGCCGGUAGUGCCGCGAUGCAGGAAAACACCGGCAGCC" ]
rfam_14_5_mafft
URS0000D6A069_12908_1-124
CCGAGAUAGGCGUACAAAUCUUGCCAAAGGCAUUUCCCUGGACGUUAGCGAUGAUCCGAAAGGUAGCGACGAUGCUCGGCGUUCAGAGGUGGCGAGUUCCGAUCUAGAGGGAUGCCACCCGGAC
(((((.(.(((((.((.....((((...))))......)).))))..((......((....))..))..).)..)))))..((..(.(((((((.....(.(..).).....)))))))).)).
[ "URS0000D6A069_12908/1-124", "URS0000D6AA16_12908/1-124", "URS0000D67DF5_12908/1-124", "URS0000D6CF91_12908/1-124" ]
[ "CCGAGAUAGGCGUACAAAUCUUGCCAAAGGCAUUUCCCUGGACGUUAGCGAUGAUCCGAAAGGUAGCGACGAUGCUCGGCGUUCAGAGGUGGCGAGUUCCGAUCUAGAGGGAUGCCACCCGGAC", "CCGAGAUAGGCGUACAAAUCUUGCCAAAGGCAUUUCCCUGGACGUUAGCGAUGAUCCGAAAGGUAGCGACGACUCUCGGCGUCCAGAGGUGGCGAGUUCCGAUCUAGAGGGAUGCCACCCGGAC", "CCGAGAUAGGCGUACAAAUCUUGCCACUGGCAUUUCCCUGGACGUUAGCGAUGAU...
rfam_14_5_mafft
URS0000D6A06E_12908_1-51
UGAUCUGCUGGUAGAGCGCCAGCAGCAUAAUCAAAAUAAAGCUCAAUGGGU
.....((((((..[[[[.))))))................]]]].......
[ "URS0000D6A06E_12908/1-51", "URS0000D66521_12908/1-51" ]
[ "UGAUCUGCUGGUAGAGCGCCAGCAGCAUAAUCAAAAUAAAGCUCAAUGGGU", "UGAUCUGCUGGUAGAGCGCCAGCAGCAUAAUCAAAACAAAGCUCAAUGGAU" ]
rfam_14_5_mafft
URS0000D6A07C_12908_1-66
AAAUCGAUCCCGAAAGAGUUGCCGUAUGGUAGCCGAAGCUCGAAAGAGAUAGGGGUCGAUUCCGCA
.((((((((((........((((....)))).......(((....)))...)))))))))).....
[ "URS0000D6A07C_12908/1-66", "URS0000D68D85_12908/1-64" ]
[ "AAAUCGAUCCCGAAAGAGUUGCCGUAUGGUAGCCGAAGCUCGAAAGAGAUAGGGGUCGAUUCCGCA", "AAAUCGAUCCCG-AAGGGUUGCCGGAUGGUAGCC-AAUCUCGAAAGAGAUAGGGGUCGAUUCCGCU" ]
rfam_14_5_mafft
URS0000D6A087_317655_1-53
ACCGGACCCGGCUCGCCGGGUGGCUCGGCCCGGCGCCUAUCCCCGGGACAACC
.....((((((....)))))).......(((((.........)))))......
[ "URS0000D6A087_317655/1-53", "URS0000D67A0B_272630/1-53" ]
[ "ACCGGACCCGGCUCGCCGGGUGGCUCGGCCCGGCGCCUAUCCCCGGGACAACC", "GUCGGACCCGGUUUUUCGGGUGGCUCGGCCCGGCGCCAAUCCCCGGGACAACC" ]
rfam_14_5_mafft
URS0000D6A096_12908_1-53
CCCUGACAGCUGCGUGGUGCAGCUGACGCAGCCCACGACAGGAGAAUGACAUG
.((((.(((((.........))))).............))))...........
[ "URS0000D6A096_12908/1-53", "URS0000D6709E_12908/1-53" ]
[ "CCCUGACAGCUGCGUGGUGCAGCUGACGCAGCCCACGACAGGAGAAUGACAUG", "CCCUGACAGCCGCAUGGUGCGUCUGACAUUUGCCACGACAGGAGAAUCACAUG" ]
rfam_14_5_mafft
URS0000D6A09C_1027396_1-52
AGCAUUGACGAAUGCUACCGUAGAAGUCCGCCUGGUUUUAUAACUACGGAUA
((((((....))))))....................................
[ "URS0000D6A09C_1027396/1-52", "URS0000D6B45D_386043/1-52", "URS0000D6C8AA_552536/1-51", "URS0000D6C8AA_932920/1-51", "URS0000D6C8AA_393126/1-51", "URS0000D6C8AA_1639/1-51", "URS0000D6C8AA_393123/1-51", "URS0000D66E2C_393118/1-51", "URS0000D6840B_12908/1-51" ]
[ "AGCAUUGACGAAUGCUACCGUAGAAGUCCGCCUGGUUUUAUAACUACGGAUA", "AGCAUUGACGAAUGCUACCGUAGAAGUCCUACUGGUUUUAUAACUACGGAUA", "AGUAUUGACGAAUACUACCGUAGAAGUAUU-CAGGUCUCAUAACUACGGAUA", "AGUAUUGACGAAUACUACCGUAGAAGUAUU-CAGGUCUCAUAACUACGGAUA", "AGUAUUGACGAAUACUACCGUAGAAGUAUU-CAGGUCUCAUAACUACGGAUA", "AGUAUUGACGAAUACUACCGUAGAA...
rfam_14_5_mafft
URS0000D6A0B7_12908_1-236
GCUGCGUAAAUGCUUCUUAGCCCAAGAGAGCUAGUACCAUCCCUGCGUUGGCAUACAUCUCAUAAUAGAACGAUAUAGUAAAGUGGAUUGUAACCCCUUGAGAAUAUGAAAAUAUUUAAGAGAGAAAUCCAAUAGUUAUAUCGCAAUGGUUAGCCGUAUGACCAUAGGAGAGUUACCUGAAACAUGAUGGAAUAUUGUAGAAUUCAUUAGCGUUCACAUUAUUUUUUUACGGUUAU
((.(((...(((.(..(((((........))))).).))).....)))..))......................(((....((...........(........................)...............)).))).....(((((.[[[[[[.))))).((((....).)))..........((((((.(((.(.............).))).))))).).]]]]]]...
[ "URS0000D6A0B7_12908/1-236", "URS0000D6A89E_12908/1-234", "URS0000D684F0_12908/1-235", "URS0000D6C839_12908/1-235", "URS0000D6A57E_12908/1-235", "URS0000D69F5C_12908/1-235", "URS0000D675E0_12908/1-236", "URS0000D682BC_12908/1-236", "URS0000D6C590_12908/1-236", "URS0000D66A25_12908/1-235" ]
[ "GCUGCGUAAAUGCUUCUUAGCCCAAGAGAGCUAGUACCAUCCCUGCGUUGGCAUACAUCUCAUAAUAGAACGAUAUAGUAAAGUGGAUUGUAACCCCUUGAGAAUAUG-AAAAUAUUUAAGAGAGAAAUCCAAUAGUUAUAUCGCAAUGGUUAGCCGUAUGACCAUAGGAGAGUUACCUGAAACAUGAUGGAAUAUUGUAGAAUUCAUUAGCGUUCACAUUAUUUUUUUACGGUUAU", "GCUGCGUAAAUGCUAUUUAGCCCAAGAGAGCUAGUAUCAUCCCUGCGUUGGCAUAAAUCUCAUAAUAGAACG...
rfam_14_5_mafft
URS0000D6A0B9_1179778_1-58
UUCCCGAGUAGAAGCGGUCAGCGCCGGCCCCGUGCCAGCGUAGGACAUUGCUCUUGCG
.....(((((..........((((.((.......)).)))).......))))).....
[ "URS0000D6A0B9_1179778/1-58", "URS0000D67FBA_12908/1-50", "URS0000D6A09F_12908/1-52", "URS0000D6C3E7_1323663/1-50", "URS0000D6A0CC_1395516/1-53", "URS0000D67C2F_1079364/1-53", "URS0000D67C2F_1196325/1-53", "URS0000D67C2F_1081940/1-53", "URS0000D67C2F_12908/1-53" ]
[ "UUCCCGAGUAGAAGCGGUCAGCGCCGGCCCCGUGCCAGCGUAGGACAUUGCUCUUGCG", "AUGGCGAGUAGAAGCGGUCAGGGCCCUUU--------GCCUGGGACAUUGCUCGAGUG", "UCGGCGAGUAGAAGCGGUUAGGGCCCACCG------GGCCCGGGACAUUGCUCGGCAU", "UACCAGAGUAGAAGCGGUCAGGGGCC--------CCGCCCCGGGACAUUGCUCUUUGA", "CUUUCGAGUAGAAGCGGUCAGUGCCAGCAAUG-----GCACCGGGCAUUGCUCUUGCG"...
rfam_14_5_mafft
URS0000D6A0BD_12908_1-90
ACGAGGAGGAACCGUUAUGCGCAUAGCGCAUAAUUAAAAAUCGGUUCCGACGACCUGCCGCCGGGCAUAAGCACGGGGGCAACACAGAUU
.......((((((..(((((((...)))))))..........)))))).......((((.((..((....))..)).)))).........
[ "URS0000D6A0BD_12908/1-90", "URS0000D6C937_12908/1-86", "URS0000D6610C_12908/1-88", "URS0000D68285_12908/1-90", "URS0000D6D382_12908/1-90", "URS0000D67FF3_12908/1-90", "URS0000D66478_12908/1-89", "URS0000D696D1_12908/1-90", "URS0000D69F79_12908/1-90", "URS0000D6B137_12908/1-90" ]
[ "ACGAGGAGGAACCGUUAUGCGCAUAGCGCAUAAUUAAAAAUCGGUUCCGACGACCUGCCGCCGGGCAUAAGCACGGGGGCAACACAGAUU", "UUGAGGAGGAACC---AUAUGACGAAGUCAUAAU-UAAAACUGGUUCCGACGACCUGCCGCCGAGCGUCAGCGAGGGGGCAAUACACUAU", "CAAGGGAGGAACCA--AUAUGACGAAGUCAUAUUAUAAAGAUGGUUCCGACGACCUGCCGCCGAGCGGAAGCGAGGGGGCAACACAUAUU", "AUGAGGAGAAACCGUUAUGCGCAUAGC...
rfam_14_5_mafft
URS0000D6A0CA_12908_1-101
UUUUUUUGAGCGGUAAGUCCGCUACAGGUUGUUUUAGGUGUUCCCCUCCGUAUGGUGGGCAAGAGCCUAAACGACACAAACUUGUAGGGCACGCUCAUUUU
....(....((.............((((((.((((((((....(((.((....)).))).....)))))))......)))))))........))..)....
[ "URS0000D6A0CA_12908/1-101", "URS0000D6D2D8_12908/1-100" ]
[ "UUUUUUUGAGCGGUAAGUCCGCUACAGGUUGUUUUAGGUGUUCCCCUCCGUAUGGUGGGCAAGAGCCUAAACGACACAAACUUGUAGGGCACGCUCAUUUU", "UACUCUCGAGCGGUAAGUCCGCUACAGGUUGUUCUAGGUGUUCCCCUCCAU-CGGUGGGCCAAAGCCUAGACGCCAAAAACCUGUAGGGCACGCUCGUUUU" ]
rfam_14_5_mafft
URS0000D6A0D0_12908_1-91
GGUCUUCGAGGUGAAAAAUGCGUCGUCAUGCGCCACAUGCUUUAUGCAAUGGGCAAAAGAGAUGCUGGGAGUGACGCUCCAGCCGAAGGCU
((((((((..((((.....[[[[[.)))).((((.................)))....)....(((((....]]]]].)))))))))))))
[ "URS0000D6A0D0_12908/1-91", "URS0000D6C55A_12908/1-91", "URS0000D6BA71_12908/1-91", "URS0000D69819_12908/1-91", "URS0000D69819_1262988/1-91", "URS0000D67F8B_12908/1-91", "URS0000D6CD91_12908/1-91", "URS0000D67742_12908/1-91", "URS0000D6BDE6_12908/1-91", "URS0000D6CC0D_12908/1-91" ]
[ "GGUCUUCGAGGUGAAAAAUGCGUCGUCAUGCGCCACAUGCUUUAUGCAAUGGGCAAAAGAGAUGCUGGGAGUGACGCUCCAGCCGAAGGCU", "GGUCUUCGAGGUGAAAAAUGCGUCGUCAUGCGCCACAUGCUUUAUGCAAUGGGCAAAAGAGAUGCUGGGAGUGACGCUCCGGCCGAAGGCU", "GAUCUUCGAGAUGAAAAAAGCGUCUUCAUGCGCCGCAUGCCUUGUGCAAUGGGCAAAAGAGAUGUCGGGAGUGACGCUCCGGCCGAAGAUU", "AAUCUUUGAGGUGAAAAAUGCGUC...
rfam_14_5_mafft
URS0000D6A0DB_12908_1-81
AUAAAAAAUAAAGGUGUAGGAAAAAGGAUUUCUUGCCGUAGCAAGGAGGGUGCGCAGACACGUAGUGUCGUCGAAAGGAAC
...............((((((((.....))))))))....................((((.....))))............
[ "URS0000D6A0DB_12908/1-81", "URS0000D6CAEC_12908/1-80" ]
[ "AUAAAAAAUAAAGGUGUAGGAAAAAGGAUUUCUUGCCGUAGCAAGGAGGGUGCGCAGACACGUAGUGUCGUCGAAAGGAAC", "-AUAAAAAUAAAGGUGUAGGAAAAAGGAUUUCUUGCCGUAGCAAGGAGGGUGCGCAGACACGUAGUGUCGUCGAAAGGAAC" ]
rfam_14_5_mafft
URS0000D6A0E0_12908_1-87
UGCAGACAAGCGCAGGGUUUGUAGAGGUCACCGGCAACGGUGGCAGCCCGAAUGGGUGGGAUCCUCGAACCUGGGGUCUGCAUGAGU
(((((((...(.((((.....(.((((((((((....)))))))..(((....))).......))).).))))).))))))).....
[ "URS0000D6A0E0_12908/1-87", "URS0000D6B55C_12908/1-87", "URS0000D6A4A2_12908/1-86" ]
[ "UGCAGACAAGCGCAGG-GUUUGUAGAGGUCACCGGCAACGGUGGCAGCCCGAAUGGGUGGGAUCCUCGAACCUGGGGUCUGCAUGAGU", "CGCAGACAAACGCAGG-GUUUGUAGAGGUCGCCGGCAACGGUGGCAGCCCGAACGGGUGGGAUCCUCGAACUUGGGGUCUGCAAACAG", "GACAGUCAAGCGCAGGAAGUAGUAGAGGCCGCCG--CAAGGUGGCAGCCCGAAAGGGUGGGAUCCUCGAACCUGGGGGCUGUCACCAA" ]
rfam_14_5_mafft
URS0000D6A0E4_649760_1-78
AGCUGCGCCGUGUCGGGUGUGCGGAAACGCCCCCGAAAGUCCUGCUAUAGAGGCUUUGACAACACGUAGCGCAGCUUC
((((((((.((((((((...(((....)).))))).(...((.........))..).....))))...))))))))..
[ "URS0000D6A0E4_649760/1-78", "URS0000D68E5F_12908/1-76", "URS0000D69B4D_12908/1-78", "URS0000D6C3A0_12908/1-78", "URS0000D6B834_12908/1-77", "URS0000D6B938_12908/1-77", "URS0000D67696_12908/1-76", "URS0000D68855_12908/1-76", "URS0000D6B93D_12908/1-78" ]
[ "AGCUGCGCCGUGUCGGGUGUGCGGAAACGCCCCCGAAAGUCCUGCUAUAGAGGCUUUGACAACACGUAGCGCAGCUUC", "AACUGCGCCGUGUCUGGUGUGCGGAAACGCCCCAGG-AGUCCUGCUAUAGAGGCUUUG-CAACACGUAGCGCAGUUUC", "AGCUGCGCCGUGUCGGGUGUGCGGAAACGUCCCCGGAAGUUCUGCUAUAGAGACUUUGACAACACGUAGCGCAGCUUC", "CACUGCGCCGUGUCGGGUGAGCGGAAACGCCCCCGGAAGUUCUGCUAGUAAGACUUUGACAAC...
rfam_14_5_mafft
URS0000D6A0E9_1144341_1-151
UCAACGCGAUAUCAAGGCGACGUCAGCGAACCUGACGGACGGAGGCGUCCUGAGAAAUCAGGAACCGGCAUUAGCCGCGAUCAGCUCUGAGAGCUGUGGAGACCUCGCAACAACUCAACAUUUCGCCGCCCCGAUGCACAGAUAUCCGCUG
.((.(..((((((....((.((((.........))))..))((((...(((((....)))))...................((((((...)))))...)...))))..................................)))))).).))
[ "URS0000D6A0E9_1144341/1-151", "URS0000D6A0E9_12908/1-151", "URS0000D65CBD_1144341/1-151" ]
[ "UCAACGCGAUAUCAAGGCGACGUCAGCGAACCUGACGGACGGAGGCGUCCUGAGAAAUCAGGAACCGGCAUUAGCCGCGAUCAGCUCUGAGAGCUGUGGAGACCUCGCAACAACUCAACAUUUCGCCGCCCCGAUGCACAGAUAUCCGCUG", "UCAACGCGAUAUCAAGGCGACGUCAGCGAACCUGACGGACGGAGGCGUCCUGAGAAAUCAGGAACCGGCAUUAGCCGCGAUCAGCUCUGAGAGCUGUGGAGACCUCGCAACAACUCAACAUUUCGCCGCCCCGAUGCACAGAUAUCCGCUG", "U...
rfam_14_5_mafft
URS0000D6A0EE_12908_1-52
GGGUUCGGGAAUCAGUUUCCCGGAGGCUAACGAGGUAGUCGGGCCGCUAUCU
....(((((((.....))))))).........(((((((......)))))))
[ "URS0000D6A0EE_12908/1-52", "URS0000D658A6_12908/1-51" ]
[ "GGGUUCGGGAAUCAGUUUCCCGGAGGCUAACGAGGUAGUCGGGCCGCUAUCU", "GGGUUCGGAAGGU-UCCUUCCGGAGGUUGUUUAGAUAGUCGGGCCGCUAUCU" ]
rfam_14_5_mafft
URS0000D6A0F8_12908_1-96
ACACAAGGUAGAGGCCAAGAACCCCCACCCUACGGAAGAAACGGGCACCAGAGAGGGCCUGGGGAGGAGCCAGUGGUGCGACCGGCUACCUUCUAU
(.(.(((((((.(((.......(((((..(............[[[[[[[.......)..)))))....)))...]]]]]..]]..))))))).).)
[ "URS0000D6A0F8_12908/1-96", "URS0000D6B156_12908/1-92", "URS0000D6BC6F_12908/1-89", "URS0000D69946_12908/1-93", "URS0000D6A448_12908/1-92", "URS0000D6A8B4_12908/1-92", "URS0000D671F3_12908/1-90", "URS0000D6950C_12908/1-92", "URS0000D6C0E7_12908/1-92", "URS0000D69F52_12908/1-94" ]
[ "ACACAAGGUAGAGGCCAAGAACCCCCACCCUACGGAAGAAACGGGCACCAGAGAGGGCCUGGGGAGG--AGCCAGUGGUGCGACCGGCUACCUUCUAU", "GCACAAGGUAGAGGCCAAGAACCCCGCCCCUACGGAAG--ACGGGCACCCUUCGGGGGC--GUGGGG--AGCCAGUGGUGCGACCGGCUACCUUCUAU", "CAACACGGUAGAGGCCAAGAA-CCCCGCCCUACGGAAG--ACGGGCACCCGACAGGGCC---UGGGG--AGCCAGUGGUGCGACCGGCUACCGUUUA-", "GCG...
rfam_14_5_mafft
URS0000D6A0FC_12908_1-83
ACUAUGGAGAGUACAAGGAACUAUGAGUAGAUACUAAGAUACAUAGAUACAAAGUAUUGAAAAUAUACUCAAUGAAGUAGUAA
(((((...(((((........(((.....(((.((.................)).)))....))))))))......)))))..
[ "URS0000D6A0FC_12908/1-83", "URS0000D69C98_12908/1-69", "URS0000D6A167_12908/1-69", "URS0000D6BA27_12908/1-69", "URS0000D6A723_12908/1-67", "URS0000D65B1F_12908/1-67", "URS0000D669FF_12908/1-67", "URS0000D69DF2_12908/1-67", "URS0000D6D001_12908/1-67", "URS0000D6C26E_12908/1-75" ]
[ "ACUAUGGAGAGUACAAGGAACUAUGAGUAGAUACUAAGAUACAUAGAUACAAA--------GUAUUGAAAAUAUACUCAAUGAAGUAGUAA", "ACUAUGGAGAGUACAAUAACUUAUGAG----------------UAAAUACAUUU------UGUAUUGAAAAUAUACUCGUUGAAGUAGUAA", "ACUAUGGAGAGUACAAGGACCUAUGAG----------------UAAAUAACUUU------GUUAUUGAAAAUAUACUCGUUGAAAUAGUAA", "ACUAUGGAGAGUACAAGGACCUAU...
rfam_14_5_mafft
URS0000D6A0FD_12908_1-49
UUGCCUAAGGGCUAGUAUUACCCUUAGGCAACUUCGAUAGCGUGUCGCA
(((((((((((.........)))))))))))..................
[ "URS0000D6A0FD_12908/1-49", "URS0000D6BC4A_12908/1-48", "URS0000D68ADC_12908/1-47", "URS0000D6CFD7_12908/1-48", "URS0000D6A0B8_12908/1-49", "URS0000D67BD6_12908/1-47", "URS0000D663A6_12908/1-47" ]
[ "UUGCCUAAGGGCUAGUAUUACCCUUAGGCAACUUCGAUAGCGUGUCGCA", "-UGCCUAAGGUCUAGUAUUACCCUUAGGUAACCUCUGUAUUUUGUAGCA", "--UCGCCUAGGCUAGUAUUACCCUAGGCGAACAUAGGUAGCGUGUAGCA", "-UUGCCUAAAGCUAGUAUUACCUUUAGGCUACUUUUGUAGCGUGUAGCA", "UUGCCUAAGGGCUAGUUUUACCUUAGGCAAACCUCUGUCUCUUGUAGCA", "-UGUCCUAAGGCUAGUAUUACC-UUAGGACACUUCUGUCG...
rfam_14_5_mafft
URS0000D6A103_12908_31-95
CGUUUAAUGUAGCCAUAUCUUUAAAGGUAUGAGAGUCUAAAGCCUCUAUAAAUACAGAUAGGACG
((((...((((((((((((......))))))[[[..{{{..)).]]].....))))..}}}))))
[ "URS0000D6A103_12908/31-95", "URS0000D684E7_12908/23-81", "URS0000D6AB40_12908/31-93", "URS0000D6AFAC_12908/26-84", "URS0000D6645D_12908/26-84", "URS0000D65DF5_12908/26-84", "URS0000D69EBA_12908/30-88" ]
[ "CGUUUAAUGUAGCCAUAUCUUUAAAGGUAUGAGAGUCUAAAGCCUCUAUAAAU-ACAGAUAGGACG", "CGUUUAAUGUAGCCAU------CGAAAGAUGAGAGUCACAAGCCUCUAUAAAU-ACAGAGUGAACG", "CGUUUAAUGUAGCCAUAUCUU---AGAUAUGAGAGUCCAAAGCCUCUAUAAAUAACAGAUGGAACG", "UGUUUAAUGUAGCCAG------CGUAAGCUGAGAGUCCAAAGCCUCUAUAAAU-ACAGAUGGAACA", "UGUUUAAUGUAGCCAG------CGUAA...
rfam_14_5_mafft
URS0000D6A108_12908_1-110
GUUACCACUGAGCGGUGGCUGUCGUGAGGUACUGGGGAGUACUGCUGACCGGCGGGUAUCGAGUCUGGGCUACAGCCAAGGGAAUGGGCCUGGACGUUUCAGUGAAGGAG
.....(((((((((((..((((((...((.(((....))).))......))))))..)))).(((.((....((..........))..))..)))..)))))))......
[ "URS0000D6A108_12908/1-110", "URS0000D6CFB7_12908/1-110", "URS0000D6CBD8_12908/1-110" ]
[ "GUUACCACUGAGCGGUGGCUGUCGUGAGGUACUGGGGAGUACUGCUGACCGGCGGGUAUCGAGUCUGGGCUACAGCCAAGGGAAUGGGCCUGGACGUUUCAGUGAAGGAG", "GUUACCACUGAGCGGUGGCUGUCGUGAGGUACUGGGGAGUACUGCUGACCGGCGGGUACCGAGUCUGGGCUACAGCCAAGGGAAUGGGCCUGGACGUUUCAGUGAAGGAG", "GUUACCACUGAACGGUGGCUGUCGUGAGGUACUGGGGAGUACUGCUGACCGGCGGGUACCGAGUCUGGGCUACAGCCAAGGGA...
rfam_14_5_mafft
URS0000D6A10B_12908_1-44
UCGCAUAGGUGAGUAUUACCUAUGCGAGCGAAGUAGCAGUAGCA
(((((((((.........))))))))).................
[ "URS0000D6A10B_12908/1-44", "URS0000D65B1D_12908/1-44", "URS0000D6628E_12908/1-44" ]
[ "UCGCAUAGGUGAGUAUUACCUAUGCGAGCGAAGUAGCAGUAGCA", "UCGCAUAGGUUAGUAUUACCUAUGCGAGCGAAGUAGCAGUAGCA", "UCGCAUAGGUUAGUAUUACCUAUGCGAGCGAGGUAGCGGUAGCA" ]
rfam_14_5_mafft
URS0000D6A113_293826_1-83
AAAAAAUAGGGGUUGUAGGGGAUGAAAUCCCCUGCCCGCUUUCAGGAAGGUGCUCAGGCUGUAAAACAGCCGUCGAAGGAAAC
..............((((((((.....)))))))).....................(((((.....)))))............
[ "URS0000D6A113_293826/1-83", "URS0000D65768_350688/1-81", "URS0000D6C94C_293826/1-82", "URS0000D6C6B3_293826/1-83", "URS0000D6BCCF_293826/1-83", "URS0000D6C3F8_293826/1-83", "URS0000D664B6_293826/1-83", "URS0000D6A5A8_293826/1-82", "URS0000D6C693_293826/1-83", "URS0000D667AC_293826/1-83" ]
[ "AAAAAAUAGGGGUUGUAGGGGAUGAAAUCCCCUGCCCGCUUUCAGGAAGGUGCUCAGGCUGUAAAACAGCCGUCGAAGGAAAC", "AUAAAAUAGGGGUUGUAGAGGAUGAAACCCCCUGCCA--CCUUAAGAAGAUACCGAGGCUGUAAAUCAGCCGUUGAAGGAAAC", "AAAAACGAGGGGGUGUAGGGGAUGAAAUCCCCCGCUCG-AUUUAGCAAGGUGCUCAGGCUGCAAAACAGCCGUCGAAGGAAAU", "AAAAAAUAGGGGGUGUAGGGGAUGAAAUCCCCUGCCCGCUUUCAGGAA...
rfam_14_5_mafft
URS0000D6A121_525255_1-68
GGUCAAAGCAGACCUAAAAUGCUGGAAUGUUACUAGUCUAAAGUCAUAGCGACGACUUAAAAAGCUUA
((((..[[[[)))).....]]]]..................((((........))))...........
[ "URS0000D6A121_525255/1-68", "URS0000D6A982_12908/1-68" ]
[ "GGUCAAAGCAGACCUAAAAUGCUGGAAUGUUACUAGUCUAAAGUCAUAGCGACGACUUAAAAAGCUUA", "GGUCAAAGCAGACCUAAAAUGCUGGAAUGUUACUAGUCUAGAGUCAUAGCGACGACUUAAAAAGCUUA" ]
rfam_14_5_mafft
URS0000D6A127_12908_1-73
UGCCUUACAAGCAGUUGUAAGGGUGGGAGAUUGUUGUCAACAGUUCAACCAAUAAAUCGAAAUCGAAAGUUGG
..((((((((....))))))))..............................(...(((....))).).....
[ "URS0000D6A127_12908/1-73", "URS0000D671F5_12908/1-73", "URS0000D68F46_12908/1-73" ]
[ "UGCCUUACAAGCAGUUGUAAGGGUGGGAGAUUGUUGUCAACAGUUCAACCAAUAAAUCGAAAUCGAAAGUUGG", "UGCCUUACAAGUAGUUGUAAGGGUGGGAGAUUGUUGUCAACAGUUCAACCAAUAAAUCGAAAUCGAAAGUUGG", "UGCCUUACAAGUAGUUGUAAGGGUGGGAAAUUGUUGUCAACAGUUCAACCAAUAAAUCGAAAUCGAAAGUUGG" ]
rfam_14_5_mafft
URS0000D6A130_12908_1-224
GGGGGUACCCGGUUCUUCUUCACGCCCUCACGCCGGAUGGUCACCUUAGUGUUAGCUGAGAGCACACGCUUUGCGGCUUACACAGUUCGAAGGUGAUUUUGAUGGGGUGAUGAGCCGCCCACGAAGCUGAACUAGAAACUUAGCCCACUUUAACAAAGAGGGGCGGGCGGAGGCGCGUUUGAGCCCUGGGGACGGGGCGAGCGAGGGCACCCCUAAGGAGUAUU
....((((...............(((((((..((....(((((.(((..(((.(((((...............)))))...))).....))).))))).....))..)))....((((((.(........................................).))))))............((((((....))))))......))))...........)))).
[ "URS0000D6A130_12908/1-224", "URS0000D696DE_12908/1-220", "URS0000D6B580_12908/1-220", "URS0000D68FA6_12908/1-224", "URS0000D69A94_12908/1-224", "URS0000D6C18E_12908/1-224", "URS0000D6797E_12908/1-224" ]
[ "--GGGGGUACCCGGUUCUUCUUCACGCCCUCACGCCGGAUGGU-CACCUUAGU--GUUAGCUGAGAGCACACGCUUUGCGGCUUACACAGUUCGAAGGUGAUUUUGAUGGGGUGAUGAGCCGCCCACGAAGCUGAACUAGAAACUUAGCCCACUUUAACAAAGAGGGGCGGGCGGAGGCGCGUUUGAGCCCUGGGGACGGGGCGAGCGAGGGCACCCCU-AAGGAGUAUU", "GAGGAUACACUCGGUUCUUCUUCACGCCCCCACAGUUGGGGAUGCACCUUGGUUAGCUAAUUCAUAGAA---------U...
rfam_14_5_mafft
URS0000D6A144_12908_1-108
UGAACGGUAUCGUAAAACCUGGAUGACUUUGGCUGUUCGGAGAACAGCAUAGCCUUCCUGAAAUGGAUAUGGGACAGAAUGAAAUCAAAGCCCAGGGUGAGCCGCUCC
.((.(((..(((.....(((((....(((....(((((...)))))......((.((........))...))...............))).))))).))).))).)).
[ "URS0000D6A144_12908/1-108", "URS0000D69C46_12908/1-107", "URS0000D65FB6_12908/1-107" ]
[ "UGAACGGUAUCGUAAAACCUGGAUGACUUUGGCUGUUCGGAGAACAG-CAUAGCCUUCCUGAAAUGGAUAUGGGACAGAAUGAAAUCAAAGCCCAGGGUGAGCCGCUCC", "AGAGAGGUUUCGUAAAACCUGG-UGACUUUGGCCGUCCGGAGGAUGGUCCUAGCUGCUUCUGAAAUGAAGCGGGUCAGAAUGAAAUCGGAGCCCAGGGUGAGCCCUCA-", "-UGAACGGAUCGUAAAGCCUGG-UGACUUUGGCUGUCCGUAGGACAGACCUAGCCUUUCCUGCAACGGAACGGGACAGAUUGAAA...
rfam_14_5_mafft
URS0000D6A14A_12908_1-84
UACCCCCUGGUAAAAAUAGGCCGCGAAUGGCGCUGGUUAGUACGCCAGGAAUGGAGCUGGAAAGUCAGCGAGGCUAACAAAGAG
((((....))))......((((........(((((((.....(((((....)))...))....))))))).)))).........
[ "URS0000D6A14A_12908/1-84", "URS0000D67C25_12908/1-84", "URS0000D6B2E3_12908/1-84", "URS0000D6BF33_12908/1-84", "URS0000D6BED7_12908/1-84", "URS0000D6B169_12908/1-84" ]
[ "UACCCCCUGGUAAAAAUAGGCCGCGAAUGGCGCUGGUUAGUACGCCAGGAAUGGAGCUGGAAAGUCAGCGAGGCUAACAAAGAG", "UACCCAUUGGUAAAAAUAGGCCGCGAAUGGCGCUGGUUAGUACGCCAGGAAUGGAGCUGGAAAGUCAGCGAGGCUAACAAAGAG", "UACCCCUUGGUAAAAAUAGGCCGCGAAUGACGCUGGUUAGUACGCCAGGAAUGGAGCUGGAAAGUCAGCGAGGCUAACAAAGAG", "UACCCCUUGGUAAAAAUAGGCCGCGAAUGGCGCUGGUUAGUACGC...
rfam_14_5_mafft
URS0000D6A14B_1338518_1-66
UAUUCCCUGUCUAACCGAAGGCUUGCGUCCCAACGUGAGCUACUUACGUAGGUGAAACGGGGUUAG
(...((((((.(.(((...(((((((((....))))))))).........))).).))))))...)
[ "URS0000D6A14B_1338518/1-66", "URS0000D6B506_1051501/1-66", "URS0000D6A893_1368424/1-66" ]
[ "UAUUCCCUGUCUAACCGAAGGCUUGCGUCCCAACGUGAGCUACUUACGUAGGUGAAACGGGGUUAG", "UUAGCCCUGUCAAUCCGAAGGCUUGCGUUCCUACGUGAGCUACUGACGUAGGUGAGAUGGGGCUUU", "CAUUCCCUGUCGAUCCGAAGGCUUGCGUUCCUACGUGAGCUACUUAUGUAGGUGAGAUGGGGCUUU" ]
rfam_14_5_mafft
URS0000D6A14C_12908_18-76
GCCUUAAUGCAGCCGCCUAUAGGUGCUGGUCGCAAGCCCAGAAAAAUGCAGAGCGGGGU
((((...((((((((((....))))[[[..{{{..)).]]].....))))..}}}))))
[ "URS0000D6A14C_12908/18-76", "URS0000D69EA4_476272/17-68", "URS0000D6860B_12908/28-82", "URS0000D69BD0_12908/28-82", "URS0000D69C4C_12908/15-65", "URS0000D67376_12908/15-72", "URS0000D6C845_12908/15-72", "URS0000D6ACC0_12908/15-72", "URS0000D6A250_12908/15-72", "URS0000D6B517_12908/16-73" ]
[ "GCCUUAAUGCAGCCGCCUAU-AGGUGCUGGUCGCAAGCCC---AGAAAAAUGCAGAGCGGGGU", "CCUCUAAUGCAGCC--------GAAGCUAGUCGCAAGCCU---GGAAAAAUGCAGAGCGGAGG", "GCCUUAAUGCAGCC--------GACGCCGGUCGCAAGCCCGGGAGCAAAAUGCAGAGCGAGGC", "GCCUUAAUGCAGCC--------GACGCCGGUCGCAAGCCCGGGAGCAAGAUGCAGAGCGAGGC", "GCCCUAAUGCAGCC--------GGAGGCGGUCACAAGCC...
rfam_14_5_mafft
URS0000D6A159_12908_1-112
ACCGCCGCCGGACGGAAACCGGUCGCGAGGGUUGGGGAGCCUGAUGACCGAUCGGCUUUCGAGGUCACCCGAGUUGAUAGGGAACUCGGCAUGAGCCGCUCUGGCGAAGGAG
.....(((((((((((..(((((((...(((((....)))))......)))))))..)))).(((((..(((((.........)))))...)).)))..)))))))......
[ "URS0000D6A159_12908/1-112", "URS0000D6ADB3_12908/1-111", "URS0000D6B49D_12908/1-112", "URS0000D6B49D_653386/1-112", "URS0000D66FF1_12908/1-111", "URS0000D6A656_12908/1-111", "URS0000D68E0B_12908/1-111", "URS0000D66205_12908/1-111", "URS0000D66992_12908/1-111", "URS0000D679D2_12908/1-111" ]
[ "ACCGCCGCCGGACGGAAACCGGUCGCGAGGGUUGGGGAGCCUGAUGACCGAUCGGCUUUCGAGGUCAC-CCGAGUUGAUAGGGAACUCGGCAUGAGCCGCUCUGGCGAAGGAG", "ACUGCCGCCGGACGG-AACCGGUCGCGAGGGUUGGGGAGCCCGACGACCGAUCGGAUUUCGAGGCCGC-UCGGGUUGAUAGGGAGCCCGGCACGGACCGCUCUGGCGAAGGAG", "ACUGCCGCCGGACGG-AACCGGUCGCGAGGGUUGGGGAGCCCGAUGACCGAUCGGAUUUCGAGGCCGCUUCGGGUUG...
rfam_14_5_mafft
URS0000D6A15E_12908_1-67
AUUCCCCUGUCGAUUCGAAGCUUUACGUUUAGUGCGUAAAAGGUUUAUGUAGAUGAGAUGGGGGAUU
(.(((((((((...((.....(((((((.....)))))))...........))...))))))))).)
[ "URS0000D6A15E_12908/1-67", "URS0000D6A15E_1262841/1-67" ]
[ "AUUCCCCUGUCGAUUCGAAGCUUUACGUUUAGUGCGUAAAAGGUUUAUGUAGAUGAGAUGGGGGAUU", "AUUCCCCUGUCGAUUCGAAGCUUUACGUUUAGUGCGUAAAAGGUUUAUGUAGAUGAGAUGGGGGAUU" ]
rfam_14_5_mafft
URS0000D6A162_12908_1-80
UUUCUUAGAGGACGGAACAGGCAGCCGUCACGCCCUAGUGGUCUUAAAAGAGAUGUGGGCCAGCCACCCCACCUAAGAAU
.(((((((..(((((....[[[..))))).((((.....))).......)....(((((...]]]..)))))))))))).
[ "URS0000D6A162_12908/1-80", "URS0000D6AAE8_12908/1-79", "URS0000D6A842_12908/1-79" ]
[ "UUUCUUAGAGGACGGAACAGGCAGCCGUCACGCCCUAGUGGUCUUAAAAGAGAUGUGGGCCAGCCACCCCACCUAAGAAU", "GAAAUCUGAGGACGGAACAGGCAGCCGUCACGCCAUUGUGGUC-UAAAAGAGAUGUGGGAUUGCCACCCCACCUGAUUUU", "GAAAUCUGAGGACGGAACAGGCAGCCGUCACGCCCUUGUGGUC-UAAAAGAGAUGUGGGAUUGCCACCCCACCUGUUUCA" ]
rfam_14_5_mafft
URS0000D6A16E_12908_1-65
CCCUUGGAGUAUCACACCAACUCAAGUACUUUGUAAAAAGGAAAGAGGAUACGUUGAAUGGGGAA
((((....(((((.......(((.....(((......)))....)))))))).......))))..
[ "URS0000D6A16E_12908/1-65", "URS0000D6B728_12908/1-63" ]
[ "CCCUUGGAGUAUCACACCAACUCAAGUACUUUGUAAAAAGGAAAGAGGAUACGUUGAAUGGGGAA", "CCCUGGGAGUAUCACACAAACUCAAGUAGCCAUU--AGGUGAAAGAGGAUAUGUUGAAUAGGGAA" ]
rfam_14_5_mafft
URS0000D6A16F_12908_1-251
UCUAGUUACUAUGGGGUAAUCAGCAUUACAUAUAUCAGAACCACUACUGAUUAAGCACUAGAAACUUUCAUAGAAGUUAUAUGUGUCAGAUAUAAUAUUAGUUGAAUAUAUAUGGGCGAUACUGUUGACAUCGGGAUGUCGUAAAACAAACGUACUGUAUUGAAUAUAUGGGCUAUAUACUGAUUGCAAGAGUUUAAGAUAAAAAAAUUGUGGGAAUUUACUAAUCAAACUGGCACUUUGGUUAGUAUUUU
((((((...........................(((((..[[[[..))))).....))))))((((((.......((((((({{{{{{{)))))))((((((............................................................................))))))....))))))...............]]]].....(((((((((((}}}}}}})))))))))))....
[ "URS0000D6A16F_12908/1-251", "URS0000D6D311_12908/1-249" ]
[ "UCUAGUUACUAUGGGGUAAUCAGCAUUACAUAUAUCAGAACCACUACUGAUUAAGCACUAGAAACUUUCAUAGAAGUUAUAUGUGUCAGAUAUAAUAUUAGUUGAAUAUAUAUGGGCGAUACUGUUGACAUCGGGAUGUCGUAAAAC-AAACGUACUGUAUUGAAUAUAUGGGCUAUAUACUGAUUGCAAGAGUUUAAGAUAAAAAAAUUGUGGGAAUUUACUAAUCAAACUGGCACUUUGGUUAGUAUUUU", "UCUAGUUGCUAAAGGGUAAUUCAAAUUUUACAUAUCAGAACCAUAACUGAUUAAGUA...
rfam_14_5_mafft
URS0000D6A183_12908_1-182
CUGACUGCGUGUGCGGCUCUCCGCUUUUUAAGUCGUACACAGCUUUAAUAAGGAGGAAAAAGCGACCCUUUGGCUCAGGGUGCGGCAGUGUGGAGACCUGUCGUAAGGCGGCGCGUCCCAAAGCGGGCGGCCGUGAGGGCGUUUCAUGCGAAGGCAGAACGCUCAGAGCUGCGAACAUGGCA
........((((((((((............))))))))))..........................(((([[[[[[))))((((((((.((....))))))))))..(((((.(((..........))))))))..((((((((..(((....))))))))))).]]]]]]...........
[ "URS0000D6A183_12908/1-182", "URS0000D69FA0_12908/1-182", "URS0000D6B82D_12908/1-182" ]
[ "CUGACUGCGUGUGCGGCUCUCCGCUUUUUAAGUCGUACACAGCUUUAAUAAGGAGGAAAAAGCGACCCUUUGGCUCAGGGUGCGGCAGUGUGGAGACCUGUCGUA-AGGCGGCGCGUCCCAAAGCGGGCGGCCGUGAGGGCGUUUCAUGCGAAGGCAGAACGCUCAGAGCUGCG-AACAUGGCA", "CUGACUGCCUGUACGGCUCUCCA-UUUUCAAGUCGUGCGGAGCUUUAAAAAGGAGG-AAACAGCACGCCCGGACUCGGGCUGCGGCAGUGUGGAGACCUGCCGUAUCAGCGGCGCGGCCCUCAGC...
rfam_14_5_mafft
URS0000D6A185_12908_1-131
ACCUACCAGAAAAUACUUUAUAGCAUUCGUUUAACUCUAUAAUAUUAAUUAAAAAAGGUCGACAUUAUGCUAAUUUUCGAAAAGAAAGGGUAUUAUUAAGGUAGUGCAUCACAGUAAUGUGUUUGCGGGAG
..(((((.....((((....((((((........................................)))))).(((....)))......))))......))))).(((.((((....))))..))).....
[ "URS0000D6A185_12908/1-131", "URS0000D67D90_12908/1-128", "URS0000D68B57_12908/1-128", "URS0000D6AE29_12908/1-128", "URS0000D68EDD_12908/1-128", "URS0000D66472_12908/1-126", "URS0000D6A53D_12908/1-126", "URS0000D68DCC_12908/1-126", "URS0000D6AD9E_12908/1-126", "URS0000D6B309_12908/1-126" ]
[ "ACCUACCAGAAAAUACUUUAUAG-CAUUCGUUUAACUCUAUAAUAUUAAUUAAAAAAGGUCGACAUUAUGCUAAUUUUCGAAAAGAAAGGGUAUUAUUAAGGUAG-UGCAUCACAGUAAUGUGUUUGCGGGAG", "ACCUACCAGAAAAUACCGUAAGGACAAUCGUUUAA--CUAUAAUAUUAAU--AAAAAGGUCGACAUCUUGUUUAUUUUCG-GAAGAAAGGGUAUUAUUAAGGUAGUUGCAUCACAGUAAUGUGUUUGCGGGAG", "ACCUACCAGAAAAUACCGUAAGGACAAUCGUUUAA--...
rfam_14_5_mafft
URS0000D6A191_12908_1-73
CCUUCAAAGAGUUGUAUCAAACAAAAUAGAUUGCUAUUUAUAGUUUUCAAAAUUGAACUUGUAGAACAAGGAA
((((....(((((........(((....((...((......))...))....)))))))).......))))..
[ "URS0000D6A191_12908/1-73", "URS0000D6818E_289380/1-73" ]
[ "CCUUCAAAGAGUUGUAUCAAACAAAA-UAGAUUGCUAUUUAUAGUUUUCAAAAUUGAACUUGUAGAACAAGGAA", "CCAUCGAAGAGUUGUAUCAAAGGAAAUUAGAUUACUA-UUAUAGUUUUCAAAAUCGGACUCGUAGAACAGGGAA" ]
rfam_14_5_mafft
URS0000D6A19F_1150862_1-70
GGCAUAUGCCUUGCUACAACCCUGCAAACCCUGGCCAACGGCGGCCGGGCUGCAAGGACAAAGACGUCGU
.............................(((((((......))))))).....................
[ "URS0000D6A19F_1150862/1-70", "URS0000D6A19F_1176490/1-70", "URS0000D6BB38_1316934/1-70" ]
[ "GGCAUAUGCCUUGCUACAACCCUGCAAACCCUGGCCAACGGCGGCCGGGCUGCAAGGACAAAGACGUCGU", "GGCAUAUGCCUUGCUACAACCCUGCAAACCCUGGCCAACGGCGGCCGGGCUGCAAGGACAAAGACGUCGU", "GGCAUAUGCCUUGCUACAACCCUGAAAACCCUGGCCAACGGCGGCCCGGCUGCAAGGACAAAGACGUCGU" ]
rfam_14_5_mafft
URS0000D6A1BD_12908_1-79
AUAAUGAUACUCCCGUCUUGAACGCGUCACUGCAUUGGGCGGUUGCGUAAGACCUACGCAGAGGGUGAAAGUCCCGUGA
............((((((..................))))))(((.(((.....))).))).(((.......)))....
[ "URS0000D6A1BD_12908/1-79", "URS0000D665D4_12908/1-60", "URS0000D69A15_12908/1-78", "URS0000D6CC07_12908/1-78", "URS0000D6C2F6_12908/1-79" ]
[ "AUAAUGAUACUCCCGUCUUGAACGCGUCACUGCAUUGGGCGGUUGCGUAAG-ACCUACGCAGAGGGUGAAAGUCCCGUGA", "AUAAUGAUACACUUGCACU-------------------GCAAUUGCGUGAGCUACCACGCGA-GGGUGAAAUUCCCGUGA", "AUAAUGAUUCUCCCGCCUUGAACGCGUCACUGCAUUGGGUGGCUGGACGAG-AACCGUGCAG-GGGUGAAAUUCCCGUGA", "AUAAUGAUACUCCCGCCUUGAACGCGUCACUGCAUUGGGUGGCUGGACGAG-AACCG...
rfam_14_5_mafft
URS0000D6A1C5_12908_1-59
CGCAGAGUGACCGACCUUCGGGUCGGGUAAUGCGGACGGUCAGACGGUCACAAUCCCAA
((((..[[[.((((((....))))))....))))((.........{..]]]..)).}..
[ "URS0000D6A1C5_12908/1-59", "URS0000D6677F_12908/1-50", "URS0000D68FEA_12908/1-59", "URS0000D6978B_12908/1-51" ]
[ "CGCAGAGUGACCGACCUUCGGGUCGGGUAAUGCGGACGGUCAGACGGUCACAAUCCCAA", "CGCAGAGUG--CGCCCUUGGGGCU---UAAUGCGGAGG----GCCGGUCACAAUCCCGG", "CGCAGAGUGACCGCCCAAAAGGGCGGGUAAUGCGGUCAGGCAGACGGUCACAAACCCGA", "CGCAGAGUGACCGACCUUCGGGUCGGGUAAUGCG--------GACGGUCACAAUCCCGA" ]
rfam_14_5_mafft
URS0000D6A1CF_1234679_1-48
CGAGACUUAGCUCCCUACAACUUGAUUUGAUGAAGCGUUGUAUGGAGC
..........((((..(((...................)))..)))).
[ "URS0000D6A1CF_1234679/1-48", "URS0000D6A1CF_1087479/1-48" ]
[ "CGAGACUUAGCUCCCUACAACUUGAUUUGAUGAAGCGUUGUAUGGAGC", "CGAGACUUAGCUCCCUACAACUUGAUUUGAUGAAGCGUUGUAUGGAGC" ]
rfam_14_5_mafft
URS0000D6A1E2_12908_1-57
GGGUGUCGACGAAGCGUAAGCGCAGUCGACAGGAUCGGGUUGGUCGGGCCGCCAGCC
....((((((..............)))))).......(((((((......)))))))
[ "URS0000D6A1E2_12908/1-57", "URS0000D69952_12908/1-54" ]
[ "GGGUGUCGACGAAGCGUAAGCGCAGUCGACAGGAUC--GGGUUGGUCGGGCCGCCAGCC", "GGGUGU----GACGGGUAA-CCCGGUCGGCAGGAUUCAGGGAUGGUCGGGCCGCCAUCU" ]
rfam_14_5_mafft
URS0000D6A1E5_253839_1-121
GCGAGACGGGUGGUCCUGCGGACGGUGGCGACCGAUAAACUGCACUUGGAACGUGAUCGGGCGCAGCCCCCGGUGUGGUUCCGCCAAAUGAUCAGCCAGCAGCCGCUGCAACCCCAGGGAG
...............................................(((((...(.((((.......)))).)...)))))..............((((....)))).............
[ "URS0000D6A1E5_253839/1-121", "URS0000D6BE85_457427/1-120", "URS0000D6B253_465541/1-121", "URS0000D66420_457425/1-117", "URS0000D6CF22_862751/1-116", "URS0000D6C549_591167/1-117", "URS0000D69121_1134445/1-118", "URS0000D677FF_1116232/1-117", "URS0000D67834_1079986/1-116", "URS0000D661F0_591159/1-1...
[ "GCGAGACG-GGUGGUCCUGCGGACGGUGGCGACCGAUAAACUGCACU-UGGAACGUGAUCGGGCGCAGCCCCCGGUGUGGUUCCGCCAAAUGAUCAGCCAGCAGCCGCUGCAACCCCAGGGAG", "GUGGGACGGGGAUGCUCUACCGGCGGAAACGCCGGAUAAACUGGCCC-AGGAACCGCACCGGGCGCAGCCCCCGG-GCGGUCCCGCC-CAUGAUCAGCCAGCAGCCGCUGCAACCCCAGGGAG", "GCGAGACG-GGUGGUCCGGCAAACGGUGCGGACCGAUAAACUGCACC-CGGAACGUG...
rfam_14_5_mafft
URS0000D6A1ED_12908_1-111
AGCCUAAACUCUACAAUUACUGUAGAGCAUGGCACAAAAUCGUUGGACAUAUUAACCCCGUCAUGGGCGUGUCCAACGUUACAAGUCGAAAGGCUUGUAUGCCGCAAGGCA
.(((....(((((((.....)))))))...))).......((((((((((.....(((......))).)))))))))).((((((((....))))))))((((....))))
[ "URS0000D6A1ED_12908/1-111", "URS0000D66BAC_12908/1-110" ]
[ "AGCCUAAACUCUACAAUUACUGUAGAGCAUGGCACAAAAUCGUUGGACAUAUUAACCCCGUCAUGGGCGUGUCCAACGUUACAAGUCGAAAGGCUUGUAUGCCGCAAGGCA", "UACCUAAAC-CCAUAGUUUUCUAAGGGCAUGGCAUCAAAUCGUUCAGCAUAUUGACCCCGUCAUGGGCGUGCUGAACGUUGCAAGUCGAAAGGCUUGUAUGCCGAAAGGCA" ]
rfam_14_5_mafft
URS0000D6A1F4_12908_1-98
UUCCCUCUUAGCGUGGAGGUUUAACUACGCUCGUUCCCCAUAUCGGUGUGGGCGCACCGGAUUUAUAAAUCAAAGUCCUUUAGGGAACGGAAAGGAAC
....((((.[[[[.)))).........]]]]..(((((....(((((........)))))......................)))))...........
[ "URS0000D6A1F4_12908/1-98", "URS0000D65D3D_12908/1-98", "URS0000D66D20_12908/1-98" ]
[ "UUCCCUCUUAGCGUGGAGGUUUAACUACGCUCGUUCCCCAUAUCGGUGUGGGCGCACCGGAUUUAUAAAUCAAAGUCCUUUAGGGAACGGAAAGGAAC", "CUUCCUCUUGGCGCGGAGGUUUAACUGCGCUCGCUCCCCAUAUCGGUGUGGGCGCACCGGAUUUACAAAUUAAAGUCCUUUAGGGAGCGGAAAGGGAC", "UUCCCUCUUGGCGCGGAGGUUUAACUGCGCUCGUUCCCCGUAUCGGUGUGGGCGCACCGGAUUUAUAAAUCAAAGUCCUUUAGGGAACGGAAAGGAAC" ]
rfam_14_5_mafft
URS0000D6A1FB_12908_1-61
AGAGUGGUCGCUGAGUUAGAGCUUAACAGCGUAAUCCCACUGCCUGACACGAACGAAAAGG
...((((.((((((((....)))...))))).....)))).....................
[ "URS0000D6A1FB_12908/1-61", "URS0000D6A62D_12908/1-61", "URS0000D6AE40_12908/1-61", "URS0000D69EFB_12908/1-60", "URS0000D6BEFD_12908/1-61", "URS0000D6895C_12908/1-61", "URS0000D6A8F2_12908/1-61" ]
[ "AGAGUGGUCGCUGAGUUAGAGCUUAACAGCGUAAUCCCACUGCCUGACACGAACGAAAAGG", "ACAGUGGUCGCUGAGUUAGAACUUAACAGCGUAAUUCCACCGCCCGACACAGUCGAAGAGG", "ACAGUGGUCGCUGAGUUAGAACUUAACAGCGUAAUACCACCGCCCGACACAGUCAAAGAGG", "GCAGUGGUCGCUGAGUUAGAGUUUAACAGCGUAAUUCCACCGCCGGACACG-UCAAAGAGG", "UCAGUGGUCGCUGAGUUAGAGCUUAACAGCGUAAUCCCACCGCCGGA...
rfam_14_5_mafft
URS0000D6A219_1235802_1-107
UUAAAGUGCAGGUAGAGAUACGCUGUAUACCCACAUUACCGAAUUUGUGUUUAAGUGUCAUGUACUGGCACCGGCUGUGGGGCCGCCGAAAGGCGGUUUUUUGCGUU
......((((((((....))).)))))..((((((...((((((....)))....(((((.....))))).))).))))))((((((....))))))..........
[ "URS0000D6A219_1235802/1-107", "URS0000D6C3FF_12908/1-107", "URS0000D68776_12908/1-107" ]
[ "UUAAAGUGCAGGUAGAGAUACGCUGUAUACCCACAUUACCGAAUUUGUGUUUAAGUGUCAUGUACUGGCACCGGCUGUGGGGCCGCCGAAAGGCGGUUUUUUGCGUU", "UAUAGUUGCAGGUAGAGAUACGCUGUAUACCCACAUUACCGAAUUAGCGUUUAAGUGUCAUGUGUUGGCACCGGCUGUGGGGCCGCCGAAAGGCGGUUUUUUUUAUA", "UGGAGUUGCAGGUAGAUAUACGCUGUAUACCCGUGUAACCGAAUUUACGUUUAAGUGUCAUGUAAUGGCACCGGUCACGGGGCCGCCGU...
rfam_14_5_mafft
URS0000D6A22B_12908_1-66
AUAAUGAUACUUCAAUAGUUUAAGCCGGCUCGUCUUGAAUAAGAGGCGGAGGUGAGAUUCCUAUGU
............(((....))..)(((.(((...........))).)))(((.......)))....
[ "URS0000D6A22B_12908/1-66", "URS0000D69ED5_936556/1-65", "URS0000D69ED5_12908/1-65", "URS0000D69171_12908/1-65", "URS0000D6723B_12908/1-66", "URS0000D6723B_596329/1-66", "URS0000D6723B_910313/1-66", "URS0000D6723B_699218/1-66", "URS0000D6723B_699246/1-66", "URS0000D6C255_12908/1-65" ]
[ "AUAAUGAUACUUCAAUAG-UUUAAGCCGGCUCGUCUUGAAUAAGAGGCGGAGGUGAGAUUCCUAUGU", "AUAAUGAUACUUCAAUAGUUUUAUGCCGGCUCAUCUUAA--AAGGGGCGGUGGUGAGAAUCCAAUGU", "AUAAUGAUACUUCAAUAGUUUUAUGCCGGCUCAUCUUAA--AAGGGGCGGUGGUGAGAAUCCAAUGU", "AUAAUGAUACUUCCAUAGUUUUAUGCCGUCUCAUCUUAA--AAGGGGCGGUGGUGAGAAUCCAAUGU", "AUAAUGAUACUUCAAUAG-UUUA...
rfam_14_5_mafft
URS0000D6A22E_12908_1-99
AUUAUGAUACUUCCGUCCAGUCACAGCCCUGCACGCGGGUGCGGGAACACGCAAUGAGGGCGGCUCGGGGAGAACCUCGGAGGGGUAUAAAACCCAUGA
............((((((.......................................))))))(((.(((.....))).)))(((.......)))....
[ "URS0000D6A22E_12908/1-99", "URS0000D6B79A_12908/1-95", "URS0000D667E0_12908/1-95", "URS0000D6B427_12908/1-83", "URS0000D65C49_12908/1-98", "URS0000D69F82_12908/1-93", "URS0000D6B371_12908/1-93", "URS0000D65D79_12908/1-95", "URS0000D69838_12908/1-95", "URS0000D67C68_12908/1-95" ]
[ "AUUAUGAUACUUCCGUCCAGUCACAGCCCUGCACGCGGGUGCGGGAACACGCAAUGAGGGCGGCUCGGGGAGAACCUCGGAGGGGUAUAAAA-CCCAUGA", "AUCAUGAUACUUCUGUCCAGCCACAGCCCUGCA----GGCGCAGGAACACGCAAUGGGGGCAGCCCGUGGAGAACCCUCGGGAGGUGCAAUU-CCUAUGA", "AUCAUGAUACUUCUGUCCAGCCACAGCCCUGCA----GACGCAGGAUCACGCAAUGGGGGCAGCCCGUGGAGAACCCUCGGGAGGUGCGAUU-CCUAUGA", ...
rfam_14_5_mafft
URS0000D6A242_12908_1-108
CGAAUCGGAUAUGCGUGAGCAAUCACGCGAAACUCGCCUGUAAUCCCGGCAUCACCGCAUCGCGGUGUGGCGACUCUCUCAAACACUGCACAAUGAUGCAGCACUCUC
............((((((....)))))).....(((((..............((((((...)))))).)))))............((((........)))).......
[ "URS0000D6A242_12908/1-108", "URS0000D69BB1_12908/1-103", "URS0000D66392_12908/1-102", "URS0000D6BB55_12908/1-108", "URS0000D6A220_12908/1-107", "URS0000D6C4B3_12908/1-105", "URS0000D66FFB_12908/1-106", "URS0000D65A56_12908/1-106", "URS0000D686B3_12908/1-105", "URS0000D6784A_12908/1-105" ]
[ "CGAAUCGGAUAUGCGUGAGCAAUCACGCGAAACUCGCCUGUAAUCCCGGCAUCACCGCAU-CGCGGUGUGGCGACUCUC-UCAAACACUGCACAAUGAUGCAGCACUCUC", "CGAAUCGGAUA-GUGCGGGAAACCGCAUGAAACUCGCCUGUAAUGCCGGCAUCACCUU---CGGGUGACGGCGACUUUUUUCAAAUGCCGCACUUU---GCGGCACUUCA", "CGAAUCGGAUAUGCGUGAGCAAUCACGCGAAACUCGCCUGUAAUCCCGGCAUCAUCGCGAAAGCGGUGUGGCGACUUC-----...
rfam_14_5_mafft
URS0000D6A244_1229485_1-54
AAAGUGAGUAGAAGCGGUCAGUGCGGGAACUCCGCGCGGGACAUUGCUCAGCAA
....((((((..........((((((.....)))))).......))))))....
[ "URS0000D6A244_1229485/1-54", "URS0000D6A924_12908/1-48", "URS0000D6BBAD_12908/1-53", "URS0000D658C5_12908/1-53", "URS0000D65996_517433/1-53", "URS0000D6BD65_1261128/1-53", "URS0000D6AA92_1348660/1-53", "URS0000D6887A_682634/1-53", "URS0000D67580_745277/1-53", "URS0000D66788_12908/1-53" ]
[ "AAAGUGAGUAGAAGCGGUCAGUGCGGGAACUCCGCGCGGGACAUUGCUCAGCAA", "CACGCGAGUAGAAGCGGUCAGGGC------GCAGCCCGGGACAUUGCUCGGCAA", "AAAUAGAGUAGAAGCGGUCAGUGCAGAUA-ACUGCGCGGGACAUUGCUCAGCAA", "ACAGUGAGUAUAAGCGGUCAGUGCAGGCA-ACUGCGCGGGACAUUGCUCAGCAA", "ACAGUGAGUAGAAGCGGUCAGUGCGGGCA-ACUGCGCGGGACAUUGCUCAGCAA", "ACAGUGAGUAGAAGC...
rfam_14_5_mafft
URS0000D6A24F_12908_1-87
AGCACGCGUCCUUAAAAGAAACCGGCGUACAUCCUCCAAAAGGUGCGCCGGGAGGUUGAAAAGCGGAUGCAAUUUCCGGCGUGUGCA
.(((((((((...........(((((((................)))))))...(((....)))(((.......)))))))))))).
[ "URS0000D6A24F_12908/1-87", "URS0000D66081_997895/1-87" ]
[ "AGCACGCGUCCUUAAAAGAAACCGGCGUACAUCCUCCAAAAGGUGCGCCGGGAGGUUGAAAAGCGGAUGCAAUUUCCGGCGUGUGCA", "AGCACAUGUCCUUAAAAGAAACAGGUUCUAGCGCAUAGCGUGAACAGCCUGGAGGUUGAAAAGCGGAUGCAAUUUCCGGCAUGUGCA" ]
rfam_14_5_mafft
URS0000D6A257_12908_1-217
GGGGGCGGUUUUCGAGAGACGCGGGACGGCUGCCCCCGUCGGCGCGCUCGAUCGCUCCUCCGCCGGUCCGGCUUCUCCUUCGUGCGGAGGCCUUUGGCGACAAAGGCGAAAGCCGGCCUCAAUGUCCGAGAGUCGCGCGGGGAUAGAUUACCCGAGAGGUGGAAAACAACCCUGGCUCCGGAGGCGGUGAAAAAUGACAGGCGGACCGCGUCCGGGA
....((((((.(((((.(..........................).))))).............(((.((((((((((.......))))...(((........)))...)))))))))...........((((.........................................)))).........................))))))........
[ "URS0000D6A257_12908/1-217", "URS0000D6A111_595536/1-214" ]
[ "GGGGGCGGUUUUCGAGAGACGCGGGACGGCUGCCCCCGUCGGCGCGCUCGAUCGCUCCUCCGCCGGUCCGGCUUCUCCUUCGUGCGGAGGCCUUUGGCGACAAAGGCGAAAGCCGGCCUCAAUGUCCGAGAGUCGCGCGGGGAUAGAUUACCCGAGAGGUGGAAAACAACCCUGGCUCCGGAGGCGGUGAAAAAUGACAGGCGGACCGCGUCCGGGA", "GGGUGCGGUUUUCGAGAGAAGCGGGGCGGCUGCCCUCGUCCGCGCGCUCGAACGCUCCUCCGCCGGUCCGGCUUCUCCUUCGUGCGGAGGCC...
rfam_14_5_mafft
URS0000D6A26C_12908_1-190
UCCGGAGUCCGCACGACCAAGGUCGCGCGGAGUGUGAUCUUGUAAAUUCAGCGGCCCACCGGCAAUGUAAACGACGUCAGGAACCUGUGGGGUAUCCGCGUGUUUGCCGGUUGUCUACACCAGUCUGGUGGUAUGUUUGUCUAAAUUCGGACGCUCAUACCUCCAUUCAUCACCAGUGGCCGCUUGCUCC
((.....(((((.(((......))).)))))....))............(((((((.((((((((.........(((..(((((.......)).))))))...))))))))..............(((.((((((....(((......)))....)))))).)))............)))))))......
[ "URS0000D6A26C_12908/1-190", "URS0000D69CE8_12908/1-190", "URS0000D68D6D_12908/1-190" ]
[ "UCCGGAGUCCGCACGACCAAGGUCGCGCGGAGUGUGAUCUUGUAAAUUCAGCGGCCCACCGGCAAUGUAAACGACGUCAGGAACCUGUGGGGUAUCCGCGUGUUUGCCGGUUGUCUACACCAGUCUGGUGGUAUGUUUGUCUAAAUUCGGACGCUCAUACCUCCAUUCAUCACCAGUGGCCGCUUGCUCC", "UCCGGAGUCCGCACGAUUGCGGUCGUGUGGAGCGUGAUCUUGUAAAUUCAGCGGCCCACCGGCAAUGUAAACGACGUCAGGAACCUAUGGGGUAUCCGCGUGUUUGCCGGUUGUCUACA...
rfam_14_5_mafft
URS0000D6A2A1_491916_1-60
CCCCUGGUCCGGGCCCCUCUGGCGAAAUUUUCGGCGCUUUCGUGAUGCCGGACCAUUUCC
.....(((((((.........((((((.(......).))))))....)))))))......
[ "URS0000D6A2A1_491916/1-60", "URS0000D6ADCE_176299/1-60" ]
[ "CCCCUGGUCCGGGCCCCUCUGGCGAAAUUUUCGGCGCUUUCGUGAUGCCGGACCAUUUCC", "CCGCUGGUCCGGGCCCCUCUGGUGAAAGUUACGGCGCUUUUGCGAUGUCGGACCUCUAAA" ]
rfam_14_5_mafft
URS0000D6A2AF_12908_1-97
UGCCAGAGAAGUUGUAUAUUGGGCUACCAUCCAGUGAUGCAAUGGAGGCUUAUUAGGGUUGUCAGUUUUCCACAGGGUAGCAAUUAAAACUGUCUGA
.(((......((((((((((((.[[[[...))))).)))))))...))).............(((...........]]]].........))).....
[ "URS0000D6A2AF_12908/1-97", "URS0000D65F67_12908/1-97" ]
[ "UGCCAGAGAAGUUGUAUAUUGGGCUACCAUCCAGUGAUGCAAUGGAGGCUUAUUAGGGUUGUCAGUUUUCCACAGGGUAGCAAUUAAAACUGUCUGA", "UGCCAGAGAAGUUGUAUAUUGGGCUACCAUCCAGUGAUGCAAUGGAGGCUUAUUAGGGUUGUCAGGUUUCCACAGGGUAGCAAUUAAAACUGUCCGA" ]
rfam_14_5_mafft
URS0000D6A2C3_12908_1-80
AAUUCUUGCGGUUCAAAGUCCGCGUAAAAUCCAGAUGACACAUUCCCGUAAUAAACGGGAGUGUGUAAUGAACAAGAAUU
((((((((((..[[[..{{.)))......(.((..]]]((((((((...........))))))))...)))}})))))))
[ "URS0000D6A2C3_12908/1-80", "URS0000D6C5FF_12908/1-79" ]
[ "AAUUCUUGCGGUUCAAAGUCCGCGUAAAAUCCAGAUGACACAUUCCCGUAAUAAACGGGAGUGUGUAAUGAACAAGAAUU", "AAUUCUUGCGGUUCAAAGUCCGCGUAAAAUCCAGAUGACACAUUCCCGUAA-AAACGGGAGUGUGUAAUGAACAAGAAUU" ]
rfam_14_5_mafft
URS0000D6A2CB_12908_1-99
AGACAUAGAGCGGUAAGACCGCUGUGGGUUGUCCAUGGUGUUCCCUUCCGGAGGUUGGCAAAGCCGUGGCGAACCAAGCCCACAGGGCACGCUCUUUUU
(((.(....((.............((((((.((((((((....((..((...))..))....)))))))......)))))))........))..).)))
[ "URS0000D6A2CB_12908/1-99", "URS0000D69E0D_12908/1-96", "URS0000D6B54E_12908/1-98" ]
[ "-AGACAUAGAGCGGUAAGACCGCUGUGGGUUGUCCAUGGUGUUCCCUUCCGGA-GGUUGGCAAAGCCGUGGCGAACCAAGCCCACAGGGCACGCUCUUUUU", "--AUAUCAGAGCGGUAAGACCUCUGUGGGUU-CCUCUGGUGUUCCCUUCCGUA-GGUUGGCAAAGCCAGAGGGCA-CGCACCCACAGGGCACGCUCUUUUU", "UAGUUAU-GAGCGAUAAGCCCACUGCGGGUUGUCCAUGGUGUUCCCUUCCGGAUGGUUGGCAAAGCCAUGGCGCAACAAGCCCACAGGGCGCGUCUCUU--...
rfam_14_5_mafft
URS0000D6A2D0_12908_1-96
GGUUCGGGAGCCUUCCGGUGGGACGGAAGGCAUGAAUGGAACCCUACCGCCGCAUCGCAAUAGGCGCGCGUUCGUGACCCCCGACGAACCAGCGCC
(((((....((((((((......)))))))).......)))))......................(((((((((..........)))))..)))).
[ "URS0000D6A2D0_12908/1-96", "URS0000D6902A_1408890/1-93", "URS0000D6A210_1123027/1-95" ]
[ "GGUUCGGGAGCCUUCCGGUGGGACGGAAGGCAUGAAUGGAACCCUAC--CGCCGCAUCG-CAAUAGGCGCGCGUUCGUGACCCCCGACGAACCAGCGCC", "GGUUCGGGAGCCUUCCGGUGGGACGGGGGGCAUGAAUGGGACCUUUA--CCCCCUAUCG-CAAGCGGCGCGCGCCCGUGG-CCCCGACGGACCCGCG--", "AGUUCGGGAGCCUUCCGGUGGGACGGAGGGCAUGAAUAGAACCGAUAACCCCUCUAUCGCCAAGCGGCGUAUGCUCGUGG--CCCGACGAGCCUGCG--" ]
rfam_14_5_mafft
URS0000D6A2D7_945704_1-63
AUAAUGAUACUUCUGAACGUUCAGGCUGCCAUCGAGAAAGGACAGCGGGUGAGAUGCCCAUGA
............((((....)))).(((.(.(......).).))).(((.......)))....
[ "URS0000D6A2D7_945704/1-63", "URS0000D66308_12908/1-53", "URS0000D665FF_12908/1-63", "URS0000D6A98F_482234/1-62", "URS0000D686AD_12908/1-63", "URS0000D6AC1E_12908/1-63", "URS0000D67CAE_869215/1-63", "URS0000D67CAE_406556/1-63", "URS0000D67706_888745/1-63", "URS0000D69C04_1069533/1-63" ]
[ "AUAAUGAUACUUCUGAA--CGUUCAGGCUGCCAUCGAGAAAGGACAGCGGGUGAGAUGCCCAUGA", "AUAAUGAUACUUCUGAUACAGAUCAGUCCAU------------AGAGAUGGUGAGAUUCCAAUGC", "ACAAUGAUACUUCUGAA--CGUUCAGGCUGCCAUCGAAAAAGGACAGCUGGUGAAAUUCCCAUGA", "AUAAUGAUACUUCUGAU--CGUUCAGGCUGCCAACG-AAAAGGACAGCGGGUGAAAUUCCCAUGA", "AUAAUGAUACUUCUGAA--CGUUCAGGCUGC...
rfam_14_5_mafft
URS0000D6A2DB_89187_1-92
CGAUCGGGAGGCACGUGGUGGGACACGCGCCGGGAAUAGAUCGAACCCGUUGUCUCUGAUGGGUGUGGUGCCGGGGCCCGACGGCAGCUGCA
(((((....(((.((((......)))).))).......)))))....................((((((((((........))))).)))))
[ "URS0000D6A2DB_89187/1-92", "URS0000D69AB9_351016/1-92" ]
[ "CGAUCGGGAGGCACGUGGUGGGACACGCGCCGGGAAUAGAUCGAACCCGUUGUCUCUGAUGGGUGUGGUGCCGGGGCCCGACGGCAGCUGCA", "CGAUCGGGAGGCUUCUGGUGGGACAGAGGCCGGGAAUGGAUCGAACCCGCCAUCUCGGAUGGGCGUGCUGCUGUGGCCCGACAGCAGGUGCG" ]
rfam_14_5_mafft
URS0000D6A2E8_12908_1-130
GUCAGAGGAACCCGUCUCUGGCGCUCUUUAAGGUGAGAAUCCUUGACAAUCCUGUGGGGCUUAUAUCUCUAGCUGGGUUAGAACAAUCCUUGAAAUGUAUAGAGUAUUAGUGCAGACGUUAAAAUCAGGA
.(((((((......)))))))......((((((.......))))))...(((((....(((.....(((((............................)))))....)))..............)))))
[ "URS0000D6A2E8_12908/1-130", "URS0000D67087_12908/1-120", "URS0000D6C03C_12908/1-97" ]
[ "GUCAGAGGAACCCGUCUCUGGCGCUCUUUAAGGUGAGAAUCCUUGACAAUCCUGUGGGGCUUAUAUCUCUAGCUGGGUUAGAACAAUCCUUGAAAUGUAUAGAGUAUUAGUGCAGACGUUAAAAUCAGGA", "GCCAGAGGAACCCGUCUCUGGCGCUCUUUAAGGUGAGAAUCCUUAACAAUCCUGUGGGGCUUAUAUCUUGUGUU----------UAUAGUAGUGGUGUCACGAGUAUUAGUGCAGACGUUAAAAUCAGGA", "-----------------------CUCUUUAAGGUGAGAAUCCU...
rfam_14_5_mafft
URS0000D6A2F2_12908_1-112
UGGUAAUGAAGCAGCAGACUGGUUUGGUGUCAUCCGCUUGCGGAGCCAGACUAUGGGUUAAGUGGAAAUCGCAAGCCGAAUAGAUUCAACAAAUCGAAAGAAAACGCUUAAC
((((......((((..(..((..[[[[...))..)..))))...)))).............(((...........]]]]...((((.....)))).........))).....
[ "URS0000D6A2F2_12908/1-112", "URS0000D67DA8_12908/1-112", "URS0000D689D8_12908/1-112", "URS0000D67E60_12908/1-112" ]
[ "UGGUAAUGAAGCAGCAGACUGGUUUGGUGUCAUCCGCUUGCGGAGCCAGACUAUGGGUUAAGUGGAAAUCGCAAGCCGAAUAGAUUCAACAAAUCGAAAGAAAACGCUUAAC", "UGGCAAUGAAGCAGCAGACUGGUUUGGUGUCAUCCGCUUGCGGAGCCAGACUAUGGGUUAAGUGGAAAUCACAAGCCGAAUAGAUUCAACAAAUCGAAAGAAAACGCUUAAC", "UGGCAAUGAAGUAGCAGACUGGUUUGGCAUUAGCUGCUUGCGGAGCCAGACCAUGAGGUAAACGGAAACCACAAGCCGA...
rfam_14_5_mafft
URS0000D6A2F6_12908_1-569
GCUAUAAUAUCUUUAGAUUGAGAUGCUGGUGCAGAGGUUUGCAAGCUGCCAGCAGCCCUCACACGGACAGGAAAACAAGGAUACUUGUAACCGUUCCCGUUGAGAAAUCUGGAUGCUGUAAAAAGCAAAGCGAGUAGGCGUGCAAUCGUUUCGAGAAGUUAAAAGCUAGUAAAGCGUGGUCGGAACAAUAGACGCUCCUGUGGAGAAUAACCUAUCAGACAGCUCUUUGGCAAGGGCGUGAAAAACUUGAUAGGAAAGCCAAACAAUCCGAUUUGUAGUGAAAGAGUGAAAACUCUCUAUAACACGCUAUACUGAACAAG...
......((.(.(..((..(..(..(((((......((((....)))).))))).(((......(((..(.(...(((((....)))))...).)..)))(.((....)).)..((((......)))).........)))..........((........(...((..(((..((((((((((((..........((((...)))).....((((((...((((((..[[[[..)))).))........))))))...]]]].....)))))).[[[[.....(((((....)))))......))))))..)))...(......
[ "URS0000D6A2F6_12908/1-569", "URS0000D6A0D9_12908/1-566", "URS0000D680C3_12908/1-567", "URS0000D68DA7_12908/1-568" ]
[ "GCUAUAAUAUCUUUAGAUUGAGAUGCUGGUGCAGAGGUUUGCAAGCUGCCAGCAGCCCUCACACGGACAGGAAAACAAGGAUACUUGUAACCGUUCCCGUUGA-GAAAUCUGGAUGCUGUAAAAAGCAAAGCGAGUAGGCGUGCAAUCGUUUCGAGAAGUUAAAAGCUAGUAAAGCGUGGUCGGAACAAUAGACGCUCCUGUGGAGAAUAACCUAUCAGACAGCUCUUUGGCAAGGGCGUGAAAAACUUGAUAGGAAAGCCAAACAAUCCGAUUUGUAGUGAAAGAGUGAAAACUCUCUAUAACACGCUAUACUG...
rfam_14_5_mafft
URS0000D6A2FA_12908_1-178
AUAUCCGUUUCGGCACUACUCCACUCAUAAUAGGCCGCGGCGGGGAACGAAGGAGGAUGCGUCCGCUGUUGCUGGCGGUGCGGCAGCGUGGAGACCUGCCGUAAGGCCGCGCGGGUAAUGCCGGCGGCGAGCUUCUUUUUGCCGGAGGGCGAAGGAGCGCAGCAAAAAACAUAUGGCA
.....((((.((((.(((............))))))).))))....................((((..[[[[[[))))((((((((.((....))))))))))..(((((.(((......))))))))..((((((((..(((....))))))))))).]]]]]].............
[ "URS0000D6A2FA_12908/1-178", "URS0000D6AB70_12908/1-178" ]
[ "AUAUCCGUUUCGGCACUACUCCACUCAUAAUAGGCCGCGGCGGGGAACGAAGGAGGAUGCGUCCGCUGUUGCUGGCGGUGCGGCAGCGUGGAGACCUGCCGUAAGGCCGCGCGGGUAAUGCCGGCGGCGAGCUUCUUUUUGCCGGAGGGCGAAGGAGCGCAGCAAAAAACAUAUGGCA", "AUAUCCGUUUCGGCACUACUCCACUCAUCAUAGGCCGCGGCGGGGAACGAAGGAGGAUGCGUCCGCUGUGGCUGGCGGUGGGCCAGCGUGGAGACCUGCCGUAAGGCCGCGCGGGUAAUGCCGGCGGCGAG...
rfam_14_5_mafft
URS0000D6A2FD_12908_1-279
AAAAACAAAGCAAGUAGGAAAUACAGGGUAAGCGUGAGGGGCUGCAUUGCAAAGGUUGGUGACCUACCGUGAUGAACUGAAAAAGAUUCAAAGUAGCGGUUUGAGCAAUGUGUAUAGACAGUAACCCGGUAAAAUGUACUGAAAAUAGGGAUAAGAGUUGAACAGGUGCAAAGUGAAUAAGUAAAUUAUGAAAGUUCAGGGUUGACCAACAACCACACCAAGAUUAUUAACUUAUCAAAUGAACAGGUAUUAAACGAGAUGACACAGUACUUUGUUUUU
((((((((((.............(.((((...............((((((...(((.....)))..((((.........................)))).....)))))).............)))).)......((((.....((...((((((((((.....((((.....(((...................))).(((((.....))))).))))..)))).....))))))..))......))))...................))))))))))
[ "URS0000D6A2FD_12908/1-279", "URS0000D65AA0_12908/1-279", "URS0000D68811_12908/1-279" ]
[ "AAAAACAAAGCAAGUAGGAAAUACAGGGUAAGCGUGAGGGGCUGCAUUGCAAAGGUUGGUGACCUACCGUGAUGAACUGAAAAAGAUUCAAAGUAGCGGUUUGAGCAAUGUGUAUAGACAGUAACCCGGUAAAAUGUACUGAAAAUAGGGAUAAGAGUUGAACAGGUGCAAAGUGAAUAAGUAAAUUAUGAAAGUUCAGGGUUGACCAACAACCACACCAAGAUUAUUAACUUAUCAAAUGAACAGGUAUUAAACGAGAUGACACAGUACUUUGUUUUU", "AAAUGCAAAGCAAGUAGGAAAUACAGGGUA...
rfam_14_5_mafft
URS0000D6A304_12908_1-81
UAGCACUUGCUAAAAAUUGAGUCGAGACUGGACUGGUCUAGUAGCUCCUUUUGAGCGAAAAAUCAGUAGACGAAAUAAGAA
((((....))))........(((........((((((......((.........)).....)))))).)))..........
[ "URS0000D6A304_12908/1-81", "URS0000D65E88_12908/1-79", "URS0000D6BE5D_12908/1-80", "URS0000D66840_12908/1-81", "URS0000D682F2_1262800/1-81", "URS0000D682F2_12908/1-81", "URS0000D67855_12908/1-81", "URS0000D67855_1262799/1-81", "URS0000D6D16D_12908/1-79" ]
[ "UAGCACUUGCUAAAAAUUGAGUCGAGACUGGACUGGUCUAGUAGCUCCUUUUGAG-CGAAAAAUCAGUAGACGAAAUAAGAA", "CAGCCCUAGCUGAAAA-UUAGUCGA-ACUGGACUGGCUUAGUAGUUCCUUUUGAAUCGAAAAGUCGGUAGACAAAAAUAAG-", "UGCCCCUUGGCAAAAA-UAAGUCGCAACUGGAUUGACCUAGUAGCUCCUUUUGAG-CGAAAAGCCGAUAGACUAAAUAAGAA", "UAGCACUUGCUAAAAAUUGAGUCGAGACUGGACUGGUCUAGUAGCUCCUUU...
rfam_14_5_mafft
URS0000D6A30B_12908_1-48
GGAAAAGCUGCUCUGCACAACUGCAUGCGAUGAGACAUUGUGCGGGGC
..........(((((.(((...................))).))))).
[ "URS0000D6A30B_12908/1-48", "URS0000D67721_903814/1-46" ]
[ "GGAAAAGCUGCUCUGCACAACUGCAU-GCGAUGAGACAUUGUGCGGGGC", "-GCAAAG--GCUCCGAACAGAUGGAUAACGAUGAGACAUUGUGCGGAGC" ]
rfam_14_5_mafft
URS0000D6A30D_12908_1-87
UUCGGGAGCUAAAGGUGGCACUUUAGCAAGAAUAGGAUGAACUUUGUUUCAUGUGGCCGAUUAGGUUGUGAUGCCCGCACAAACUAU
(((....(((((((......))))))).......)))........................(((.(((((.......))))).))).
[ "URS0000D6A30D_12908/1-87", "URS0000D6A30D_1007109/1-87", "URS0000D6A30D_367336/1-87" ]
[ "UUCGGGAGCUAAAGGUGGCACUUUAGCAAGAAUAGGAUGAACUUUGUUUCAUGUGGCCGAUUAGGUUGUGAUGCCCGCACAAACUAU", "UUCGGGAGCUAAAGGUGGCACUUUAGCAAGAAUAGGAUGAACUUUGUUUCAUGUGGCCGAUUAGGUUGUGAUGCCCGCACAAACUAU", "UUCGGGAGCUAAAGGUGGCACUUUAGCAAGAAUAGGAUGAACUUUGUUUCAUGUGGCCGAUUAGGUUGUGAUGCCCGCACAAACUAU" ]
rfam_14_5_mafft
URS0000D6A315_12908_1-178
AUCCGCCCGGAUGCAACACUCCACUCAUUGUUGCAUUUUCAGGGAAAGAAAAGGAGGAAAUCCGUCAGGCUUGCGGUGCGACAGUGUGGAGACCUGUCGUAAUGUGGCGCGGAAGAAAUCGCCGGUCACGAGAUGAUACAUUGCGGAGGCAGUAUCAUUAAAGUCUUAAUUUAUGUCA
.....((.((((((((((..........)))))))))..).))..................((((.[[[[[[))))((((((((.((....))))))))))..(((((.(((.........))))))))..((((((((..(((....))))))))))).]]]]]]............
[ "URS0000D6A315_12908/1-178", "URS0000D670BC_1262872/1-178", "URS0000D68940_12908/1-176", "URS0000D697AB_12908/1-176", "URS0000D6998B_1263078/1-177", "URS0000D6BEDE_12908/1-177", "URS0000D66B53_12908/1-177" ]
[ "-AUCCGCCCGGAUGCAACACUCCACUCAUUGUUGCAUUUUCAGGG-AAAGAAAAGGAGGAAAUCCGUCAGGCUUGCGGUGCGACAGUGUGGAGACCUGUCGUAAUGUGGCGCGGAAGAAAUCGCCGGUCACGAGAUGAUACAUUGCGGAGGCAGUAUCAUUAAAGUCUUAAUUUAUGUCA", "-AUCCGCCCGGAUGCAACACUCCACUCAUUGUUGCAUUUUCAGGG-AAAGAAAAGGAGGAAAUCCGUCAGGCUUGCGGUGCGACAGUGUGGAGACCUGUCGUAAUGUGGCGCGGAAGAAAUCGCCGGUC...
rfam_14_5_mafft
URS0000D6A323_12908_1-86
CACCCCUUGGUGAAGAUAAGCAAAUUUGGGGAGCGGGUUAGUACACCUCUGCGGAGGCGCUGGAAAGCCCGUACAGCUAAAAGGAG
((((....))))......(((...........((((((.....(((((......)))...))....))))))...)))........
[ "URS0000D6A323_12908/1-86", "URS0000D67D05_12908/1-84", "URS0000D675DF_12908/1-84", "URS0000D663C8_12908/1-84", "URS0000D6A8CD_12908/1-84", "URS0000D6C6B1_12908/1-84", "URS0000D6C3BC_12908/1-84", "URS0000D6872E_12908/1-86", "URS0000D6B0E7_12908/1-85", "URS0000D6B91D_12908/1-85" ]
[ "CACCCCUUGGUGAAGAUAAGCAAAUUUGGGGAGCGGGUUAGUACACCUCUGCGGAGGCGCUGGAAAGCCCGUACAGCUAAAAGGAG", "CACCUCAUGGUGAAGAUAGGC--AUUUUGGGAGCAGGCUAGUACACUCCGCAGGGGGCGAUGGAAAGCCUGUACAGCUAAAAGGAG", "CACCCCACGGUGAAGAUAGGC--AUUUUGGGAGCAGGCUAGUACACUCCGCAGGGAGCGAUGGAAAGCCUGUACAGCUAAAAGGAG", "CACCCCACGGUGAAGAUAGGC--AUUUUGGGAGCAGGCU...
rfam_14_5_mafft
URS0000D6A348_12908_1-109
ACUACCGCCAGAGGUUAGCGGUCGCGAAGGUUGGGGAGCCUGAUGACCGGCCGAGAGCUAGUUGGACUGAGGUUUAAGGGAGCCUACAGUGAACGUUCUGGCGAAGGAG
.....(((((((((((..((((((...(((((....)))))......))))))..)))).(((..(...((((........))))....).)))..)))))))......
[ "URS0000D6A348_12908/1-109", "URS0000D68C27_12908/1-109", "URS0000D6C26B_12908/1-109", "URS0000D6C26B_435830/1-109" ]
[ "ACUACCGCCAGAGGUUAGCGGUCGCGAAGGUUGGGGAGCCUGAUGACCGGCCGAGAGCUAGUUGGACUGAGGUUUAAGGGAGCCUACAGUGAACGUUCUGGCGAAGGAG", "ACUACCGCCAGAGGUUAGCGGUCGCGAGGGUUGGGGAGCCUGAUAACCGGCCGAGAGCUAGUUGGACUGAGGUUUAAGGGAGCCUACAGUGAACGUUCUGGCGAAGGAG", "ACUACCGCCAGAGGUUAGCGGUCGCGAGGGUUGGGGAGCCUGAUGACCGGCCGAGAGCUAGUUGGACUGAGGUUUAAGGGAGCCU...
rfam_14_5_mafft
URS0000D6A34B_12908_1-152
UUAUAUUGCAGAUAGGAAAGGGAUUCACCAAAAAUGGUUUGUCCUUUUUUUAUGUCAAUUUCUAUGCUGUAUAUCUGUGUCACUGAAUGAAAGUUUAAGCGUUAUAUAAGAACGCCAGCCACAGAGCCACCAAUCAGGUGGUAUUUUUUUUG
......((((((((................................................))).)))))..((((((...((((((....)))....((((.......)))).))).))))))((((((.....))))))..........
[ "URS0000D6A34B_12908/1-152", "URS0000D6A544_12908/1-108", "URS0000D671BF_12908/1-106", "URS0000D6D210_12908/1-111", "URS0000D6826D_12908/1-111", "URS0000D675B6_12908/1-116", "URS0000D6997C_12908/1-115", "URS0000D6AF93_12908/1-115", "URS0000D6CD16_12908/1-115", "URS0000D65BF8_12908/1-117" ]
[ "UUAUAUUGCAGAUAGGAAAGGGAUUCACCAAAAAUGGUUUGUCCUUUUUUUAUGUCAAUUUCUAUGCUGUAUAUCUG---UGUCACUGAAUGAAAGUUUAAGCGUUAUAUAAGAACGCCAGCCACAGAG--CCACCAAUC-AGGUGGUAUUUUUUUUG", "--------------------------------------------UUUUUUAGUGUCAAUUUCUAUGCUGUAUAUCUG---UGUCACUGAAUGAAAGUUUAAGCGUUAUAUAAGAACGCCAGCCACAGAG--CCACCAAUC-AGGUGGUAUU...
rfam_14_5_mafft
URS0000D6A361_12908_1-70
GGGCCGUGAGGACGGAAAGGCUUCCGUCGCCUGAGUGGAAAUCCAGAUAGUUGCCGACCUGGCACGGUUC
((((((((..(((((...[[[..))))).(.......)....((((......]]]...))))))))))))
[ "URS0000D6A361_12908/1-70", "URS0000D67345_12908/1-70" ]
[ "GGGCCGUGAGGACGGAAAGGCUUCCGUCGCCUGAGUGGAAAUCCAGAUAGUUGCCGACCUGGCACGGUUC", "GGAUCGUGAGGACGGAAAGACUUCCGUCGCCGGUGUGGAAAUCCAGGAGCUUGUCGACCUGGCACGGUUC" ]
rfam_14_5_mafft
URS0000D6A364_12908_1-74
AACUGCGCCGUGUCGGCAAGUAGAAAUACACCGGAGCUUUGCGUUUAGGCUUGAACAGCACGUAGCGCAGUUUU
((((((((.(((((((...(((....))).)))((((...........)))).....))))...))))))))..
[ "URS0000D6A364_12908/1-74", "URS0000D67F4D_12908/1-74", "URS0000D6B3F8_12908/1-74" ]
[ "AACUGCGCCGUGUCGGCAAGUAGAAAUACACCGGAGCUUUGCGUUUAGGCUUGAACAGCACGUAGCGCAGUUUU", "AACUGCGCCGUGUCGGCAAGUAGAAAUACCCCGGGGCUUUGCGUUUAGGCUUGAACAGCACGUAGCGCAGUUUU", "AACUGCACCGUGUCGGGAAGUGGAAACACCCCCGGAGCUUGCAAUUAGGCUUGAACAACACGUAGUGCAGUUUU" ]
rfam_14_5_mafft
URS0000D6A377_12908_1-155
GGUCUUUGACAUAUUUGAUAAGCAACGAUGGAAUAACAAAUAAAUAGUGAUUAACCCAUCGCUGGUAGAGCCUGAGCAAAAAGAGCCAGGUGCAUAGGCAAGGCGUCAGCUUGACGGGCUUGUCCACUGCGGGGAGCGAAACCUCCUGCCAGCAC
............................................................(((((((((.((((............))))).......((((................))))........((((.......))))))))))))..
[ "URS0000D6A377_12908/1-155", "URS0000D6CF15_12908/1-152", "URS0000D65A12_12908/1-152", "URS0000D693C0_12908/1-149" ]
[ "GGUCUUUGACAUAUUUGAUAAGCAACGAUGGAAUAACAAAUAAAUAGUGAUUAACCCAUCGCUGGUAGAGCCUGAGCAAAAAGAGCCAGGUGCAUAGGCAAGGCGUCAGCUUGACGG-GCUUGUCCACUGCGGGGAGCGAAACCUCCUGCCAGCAC", "GAUCUUUGACAUAUUGA--AAAUAGCGAUGGACAAGACA--ACAUAGUAAUUAACCCAUCGCUGGUAGAGCUUGAGCAAAAAGAGCCAAGUGCAUAGGCAAGCCGUCAUCUUAACGGAGCUUGUCCACUGCGGGGAGCGAAACCUCCUGCCAG...
rfam_14_5_mafft
URS0000D6A37C_12908_1-121
GACCUAAACCGCUUGGGCGGCAUGGUUGUAACAAAAUCCAUCGCGAAAUGAAAAGCUCGUCGUCAGAGCACUAUUUCGCGAUGGUCAGUAUCGGAAACGAUACUGGGUAGCCUAGGCUACC
((((....((((....))))...))))..........(((((((((((......((((.......))))....))))))))))).((((((((....))))))))((((((....))))))
[ "URS0000D6A37C_12908/1-121", "URS0000D66745_12908/1-120", "URS0000D65944_12908/1-120", "URS0000D6C398_12908/1-118", "URS0000D65A3D_12908/1-118" ]
[ "GACCUAAACCGCU-UGGGCGGCAUGGUUGUAACAAAAUCCAUCGCGAAAUGAAAAGCUCGUCGUCAGAGCACUAUUUCGCGAUGGUCAGUAUCGGAAACGAUACUGGGUAGCCUAGGCUACC", "GACCUAAUCCGCCCUCGGCGGUAUGGUUGUUUGAAAAUCCAUUAGGAAUA-UAAAGCUCGUCGUCAGAGCACUAUUCC-UAGUGGUCGGUACUGGAAACGGUAUCGGGUAGCCUUGGCUAUC", "GACCUAACCCGCCAUUGGCGGUAUGGUUGUUAC-AAAUCCAUCGUGAAAU-AAAAGCUC...
rfam_14_5_mafft
URS0000D6A37E_12908_1-279
CGCUAAAUUAGGAAAAACGCUUGAAACCUGUACGUUUUUUUGUUAUGCAAAAAAAUAAAUACAGACUUAAGUUGAGAGCGUUUAACUUAAGUCUUUUUUAUUAGCGUUAAAAAACUAUAUACAAGUGGUGGUAGUCCGCCACUCUAAGGGGACGCCUUUAGAAGAAGAGGCUAGGUGGUAUUCCGGUGUGGGAUACUUAGUAAUAUGCAACGCUAAUUGCAUAAGAUUGUAGGACGGAAUUUACAGUCUUGGUUUUUAUAAACCUGAAACUAAGUAAGC
......(((((...........................(.((((.((........)))))).).((((........)).))..(((.(((..........)))..))).................((((..[[[[[.))))...........................]]]]]......[[[[[[........{{{{{{{{..[[[[[....))))).]]]]]..((((((...]]]]]].)))))).(.((((......)))).)..}}}}}}}}...
[ "URS0000D6A37E_12908/1-279", "URS0000D6A42B_12908/1-271", "URS0000D675A0_12908/1-272", "URS0000D6BFDA_12908/1-270", "URS0000D6701E_12908/1-271", "URS0000D662FA_12908/1-269", "URS0000D6CE34_12908/1-270", "URS0000D68999_12908/1-270", "URS0000D67B5E_12908/1-278" ]
[ "----CGCUAAAUUAGGAAAAACGCUUGAAACCUGUACGUUUUUUUGUUAUGCAAAAAAAUAAAUACAGACUUAAGUUGAGAGCGUUUAACUUAAGUCUUUUUUAUUAGCGUUAAAAAACUAUAUACAAGUGGUGGUAGUCCGCCACUCUAAGGGGACGCCUUUAGAAGAAGAGGCUAG--GUGGUAUUCCGGUGUGGGAUACUUAGUAAUAUGCAACGCUAAUUGCAUAAGAUUGUAGGACGGAAUUUACAGUCUUGGUUUUUAUAAACCUGAAACUAAGUAAGC", "AUGAUUCUUAGUU----AAUCUUC...
rfam_14_5_mafft
URS0000D6A382_12908_1-120
CGCGCGCCGGGACGGGGACUACACACCAGCAGGCGCGGGAUAGCCGUACUGGGGGAAAGGUCUUGAGAUACGGCAGGGGGCGGCGAAGCUAGCACCCCCAAGACCACAUGGCUGGCGGGC
(.((((((.(...............[[[[).)))))).)...((((((]]]].......[[[[.....)))))).(((((.......{{{{{{.))))).]]]]......}}}}}}....
[ "URS0000D6A382_12908/1-120", "URS0000D68673_12908/1-119", "URS0000D69A2C_12908/1-119" ]
[ "CGCGCGCCGGGACGGGGACUACACACCAGCAGGCGCGGGAUA-GCCGUACUGGGGGAAAGGUCUUGAGAUACGGCAGGGGGCGGCGAAGCUAGCACCCCCAAGACCACAUGGCUGGCGGGC", "CGCGCGUCGGGACGGGGACUACACACCAGCCGGCGCGGGAUAGGCCGGGACUGAGGGACUGUCUUGAGAAACCGGCACAGGCGGCGAGGCUAGCACCUG--AAGACGAACGGCUGGCGGGC", "CGCGCGCCGGGACGGGGACUACACACCAGCAGGCGCGGGAUA-GUCGUACUGGGGGAAAGG...
rfam_14_5_mafft
URS0000D6A384_243265_1-67
UACUCGGCUAGGGUAGCUCCCGAAAAGCGGAUUUCGUCACCGCCUGCUGAGCACUAUUUCAUGACGA
(.((((((..(((.....))).....((((...[[[[[.))))..)))))).).........]]]]]
[ "URS0000D6A384_243265/1-67", "URS0000D6ADFC_573395/1-64" ]
[ "UACUCGGCUAGGGUAGCUCCCGAAAAGCGGAUUUCGUCACCGCCUGCUGAGCACUAUUUCAUGACGA-", "GCAGUGGCUAGGGUAGCUCCCGAAAAGCGG-CAUCGUCACCGCCUGCCA---CUGAUUCAAUGACGAA" ]
rfam_14_5_mafft
URS0000D6A388_399742_1-52
AAUAAAAUCUCCUGAACAGGAGAGGGCCGACUGUUGCCUGAAAAAGGGAUCA
........(((((....)))))..............................
[ "URS0000D6A388_399742/1-52", "URS0000D672B8_670484/1-51" ]
[ "AAUAAAAUCUCCUGAACAGGAGAGGGCCGACUGUUGCCUGAAAAAGGGAUCA", "AAAAAUAUCUCC-AGUCAGGAGAGGGCUAACUGUUGCCUGAAGAAGGGGAAA" ]
rfam_14_5_mafft
URS0000D6A394_12908_1-123
GUCUUAAUUGGACGGCUAAAACCACCAGCGAUUAAGAUACAAGUGCUACUGGGGGAUAGUUGAUGUAAUAGCACACAAGGAGAUGGCGAAGUCAGAGUCUCCUUCAACGAAAGUCUGACGGGU
((((((((((..............[[[[))))))))))....((((((]]]].......[[[[.....))))))....((((((......{{{{{{)))))).]]]]......}}}}}}....
[ "URS0000D6A394_12908/1-123", "URS0000D6C41C_12908/1-123", "URS0000D6776F_12908/1-122", "URS0000D666D1_12908/1-122" ]
[ "GUCUUAAUUGGACGGCUAAAACCACCAGCGAUUAAGAUACAAGUGCUACUGGGGGAUAGUUGAUGUAAUAGCACACAAGGAGAUGGCGAAGUCAGAGUCUCCUUCAACGAAAGUCUGACGGGU", "GUCUUAAUUGGACGGCUAAAACCACCAGCGAUUAAGAUACAAGUGCUACUGGGGGAUAGUUGAUGUAAGAGCACACAAGGAGAUGGCGAAGUCAGAGUCUCCUUCAACGAAAGUCUGACGGGU", "GUCUUAAAAGGUCGGCUAAAAACAACAGCUUUUAAGAUACAAGUGCUACUGUGGGAU...
rfam_14_5_mafft
URS0000D6A3A5_12908_1-80
GUUAUUUGAGGAUAGAACAGGCAGCUAUCACGCCCUUGGGGUCUUAAAAGAGAUGCCGGAGUGCCGUCCGGUUGAAUAAC
((((((((..(((((....[[[[.))))).(((((...)))).......)....(((((..]]]]..)))))))))))))
[ "URS0000D6A3A5_12908/1-80", "URS0000D697A9_12908/1-79", "URS0000D67D59_12908/1-80", "URS0000D66020_12908/1-79", "URS0000D6A981_12908/1-79", "URS0000D66E8F_411461/1-79", "URS0000D66E8F_12908/1-79", "URS0000D66E8F_742765/1-79", "URS0000D69B4E_12908/1-79" ]
[ "GUUAUUUGAGGAUAGAACAGGCAGCUAUCACGCCCUUGGGGUCUUAAAAGAGAUGCCGGAG-UGCCGUCCGGUUGAAUAAC", "GUUAUUCAAGGAUAGAACAGGCUGCUAUCACGCCC-UCGUGGUCUUAAAGAGAUGUCGGAU-UGCCACCCGACUGGAUAAC", "CUUAUCCAAGGAUAGAACAGGCAGCUAUCACGCCCUUUGUGGUCUUAAAGAGAUACCGGAG-UGUCACCCGGUUGGAUAAU", "GUUAUUCAAGGAUAGAACAGGCAGCUAUCACGCCC-UCGUGGUCUUAAAGAGAU...
rfam_14_5_mafft
URS0000D6A3B8_1156841_1-105
CGGUGCUUGCAUCACCUGACACCGGAUGACCGGAUUAAUCGGAUUAGCUCGCUCACUUGUGGACGAGCCCGCAUCUUCCGGGUCCCGUCCCUCCGUCACGGAGGU
........................(.((..(((.((.........)).)))..)).)...(((((.(((((.......)))))..)))))...............
[ "URS0000D6A3B8_1156841/1-105", "URS0000D697F5_1303692/1-103", "URS0000D67639_1155715/1-102", "URS0000D6933D_1085628/1-102", "URS0000D67720_455632/1-95", "URS0000D6C67B_1609288/1-95", "URS0000D67411_1169156/1-95", "URS0000D65EE2_1055352/1-95", "URS0000D6739A_1172567/1-96", "URS0000D65DB3_457431/1-9...
[ "CGGUGCUUGCAUCACCUGACACCGGAUGACCGGAUUAAUCGGAUUAGCUCGCUCACUUGUGGACGAGCCCGCAUCUUCCGGGUCCCGUCCCUCCGUCACGGAGGU", "CGGUGCUUGCAUCACCCGACACCGAGUGACCGGAUUAAUCGGAUUAGCUCGCUCACUUGUGGACGAGCCCGAAUCAUCCGGGCCCGGU--CUCCGUCACGGAGGU", "CGGUGCUUGCAUCACCUGACACCGGGUGACCGGAUUAAUCGGAUGAGAUCCCUUGCCCAGGGACGGGUCCG-GCUUCUCCGGGGCCGU--CCC...
rfam_14_5_mafft
URS0000D6A3BA_12908_1-104
UUGCGCCUGCAAAGGAUGCAGCAAGCCCUGUAUUACGGUUCUGCAGGCAACUGGAGCUUGUAUCAUCUCGUAUCUUGGCAAGAGUGCCAAUUCAAAAUCUUUCC
....(((((((..[[.[[..[[[[[[.[........[[[[.)))))))]]]].].]]]]]]..]].]]......((((((....))))))..............
[ "URS0000D6A3BA_12908/1-104", "URS0000D69C68_12908/1-103" ]
[ "UUGCGCCUGCAAAGGAUGCAGCAAGCCCUGUAUUACGGUUCUGCAGGCAACUGGAGCUUGUAUCAUCUCGUAUCUUGGCAAGAGUGCCAAUUCAAAAUCUUUCC", "UUGCGCCUGCAAAGGAUGCAGCAAGCCCUGUAUUACGGUUCUGCAGGCAACAGGAGCUUGUAUCAUCUCGUAUCUUGGCAA-UGUGCCAAGUCAAAAUCUUUCC" ]
rfam_14_5_mafft