id
stringlengths
12
30
sequence
stringlengths
12
4.38k
secondary_structure
stringlengths
12
4.38k
aligned_ids
listlengths
1
10
aligned_sequences
listlengths
1
10
split
stringclasses
4 values
URS0000D6A3BE_12908_1-77
GUGCACGUAACUUUCUCGCAUUAAGUUGCAAGGGGAGGGGGAAAUUGGGGUCCCCUCCGGUUGCGGGGCACGGAAAG
((((.((.((((.((..(((......)))..)).(.((((((........)))))).))))).))..))))......
[ "URS0000D6A3BE_12908/1-77", "URS0000D666E4_12908/1-73", "URS0000D65818_12908/1-74", "URS0000D66FBF_742742/1-74", "URS0000D66FBF_12908/1-74", "URS0000D6A474_12908/1-73" ]
[ "GUGCACGUAACUUUCUCGCAUUAAGUUGCAAGGGGAGGGGGAAAUUGGGGUCCCCUCCGGUUGCGGGGCACGGAAAG", "GUACCCGUAGCUUUCUCGCAUUCAGUUGCAAGGGGGAGGGGAA--U-GGGUCCCCUCCGGUUGCGUG-UACAGAAGG", "GUACCCGUAGCUUUCUCGCAUUCAGUUGCAAGGGGGAGGGGAA--UGGGGUCCCCUCCGGUUGCGUG-UACAGAAGG", "GUGCACGUAACUUUCUCGCAUUAAGUUGCAAGGGGGAGGGGAA---UGGGUCCCCUCCGGUUGCGG...
rfam_14_5_mafft
URS0000D6A3C4_12908_1-122
UAUAGGUACAGAUAGUGAUUGAUAUACUAUACUGUGUACAACAAGGAAAUGAAUUAGUGUUUAAGCGUAUUUGUAAGUACGUCAUCUUGUUGGGUCGCCCUAAUGGGCGAUUUGUGUUAUAU
......((((((((.............))).)))))..((((((....((((((....)))....(((((......))))).))).))))))((((((((....))))))))..........
[ "URS0000D6A3C4_12908/1-122", "URS0000D6B3BC_12908/1-116", "URS0000D6A4FE_12908/1-122", "URS0000D69F11_12908/1-122", "URS0000D660D9_12908/1-122" ]
[ "UAUAGGUACAGAUAGUGAUUGAUAUACUAUACUGUGUACAACAAGGAAAUGAAU--UAGUGUUUAAGCGUAUUUGUAAGUACGUCAUCUUGUUGGG--UCGCCCUAAUGGGCGA-UUUGUGUUAUAU-", "UAUAAAUACAGAUGG----UAGUGUGCUGUACUGUGUACAACAAGGGAAUGAAUUAUAUGAUUUAAGCGUAAU-GUAAGUACGUCAUCUUGUUGGUCAU----CUUUUAGGUGA-UUUGUAUUAUA--", "UAUAAGUACAGAUAG----AAAUAUACUAUACUGUGUACAGCAAGGA...
rfam_14_5_mafft
URS0000D6A3C8_12908_1-61
GUUAUAAUGUAGCUUAGUAUUUACUAAACUGUUCCAAGCCAGUAUAAAUACAGAGGAUAAC
((((...(((((((((((....)))))[[[..{{{..)).]]].....))))..}}}))))
[ "URS0000D6A3C8_12908/1-61", "URS0000D6BF07_12908/1-52" ]
[ "GUUAUAAUGUAGCUUAGUAUUUACUAAACUGUUCCAAGCCAGUAUAAAUACAGAGGAUAAC", "AUUGUAAUGUAGCCAA---------AGACUGUUCCAAGCCAGUAUAAAUACAGAGGACAAU" ]
rfam_14_5_mafft
URS0000D6A3CA_353496_1-118
GACGAGUCGAGGAAAACGCAAAGGUGCGUAUUUUUAAGAUAGAGGGCAUCAGGCCUUUGGCCAGACGCGGGAAGCGUCGAUGCUGACACACCCUUGAUGUGAACGAGAAGGAGUCACA
.....((((((((..((((......)))).)))))..)))....((((((.((((...)))).(((((.....)))))))))))(((.....(((.........))).....)))...
[ "URS0000D6A3CA_353496/1-118", "URS0000D6CF1A_12908/1-117", "URS0000D6C76D_784613/1-117", "URS0000D6A3CA_321956/1-118", "URS0000D6A3CA_390333/1-118", "URS0000D67025_767455/1-117", "URS0000D6806A_872326/1-117", "URS0000D6806A_1293597/1-117", "URS0000D6A6E3_12908/1-111" ]
[ "GACGAGUCGAGGAAAACGCAAAGGUGCGUAUUUUUAAGAUAGAGGGCAUCAGGCCU-UUGGCCAGACGCGGGAAGCGUCGAUGCUGACACACCCUUGAUGUGAACGAGAAGGAGUCACA", "GACGAGUCGAGGAAAACGCAAAGGUGCGUA-UUUUAAGAUAGAGGGCAUCAGGCCU-UUGGCCAGACGCGGGAAGCGUCGAUGCUGACACACCCUUGAUUUGAACGAGAAGGAGUCACA", "GACGAGUCGAGGAAAACGCAAAGGUGCGUA-UUUUAAGAUAGAGGGCAUCAGGCCU-UUGGCCAG...
rfam_14_5_mafft
URS0000D6A3D4_12908_1-126
UGCCUAAACCUGCGACUUCGUUCGUCAGGCAUGGCAUAAAAACCCAUCGAAGAUAUUAAGCUCGUCGUCAGAGCACUCUUCGAUGGGUCAUAUCGGGAAACCGGUAUGGGUGGUCGCAAGACCAUC
((((....(((((((......))).))))...))))......(((((((((((......((((.......))))..))))))))))).((((((((....))))))))(((((((....)))))))
[ "URS0000D6A3D4_12908/1-126", "URS0000D6B400_12908/1-117", "URS0000D6C77B_12908/1-116", "URS0000D666B2_12908/1-126", "URS0000D6B574_12908/1-124", "URS0000D699FC_12908/1-122", "URS0000D6CE60_12908/1-124", "URS0000D68383_12908/1-124" ]
[ "UGCCUAAACCUGCGACUUCGUUCGUCAGGCAUGGCA-UAAAAACCCAUCGAAGAUAUUAAGCUCGUCGUCAGAGCACUCUUCGAUGGGUCAUAUCGGGAAACCGGUAUGGGUGGUCGCAAGACCAUC", "UGCCUAAACCCG------UAAUCUUCGGGCAUGGCA--GAAAAACCUUUGCAGAUAUUAAGCUCGUCGUCAGAGCA--UCUGCAAGGGUCAUGACUCGAAAGGGUUGUGGGUGGUCGUAAGAUCAUC", "UGCCUAAAC---------CUUUUGCGAGGCAUGGCAUUAAAAGUCCGAU...
rfam_14_5_mafft
URS0000D6A3DC_12908_1-77
AAAGAAAAAGCCAAACCUGCCGCAAGACAGGGACGGGGAAUUACGGGUCUUAUAAAAAUAUUGCCGGUUUGCCUUGA
..........((...((((.(....).))))...))..((.(.(((((...........))..)))).)).......
[ "URS0000D6A3DC_12908/1-77", "URS0000D67A64_12908/1-75" ]
[ "AAAGAAAAAGCCAAACCUGCCGCAAGACAGGGACGGGGAAUUACGGGUCUUAUAAAAAUAUUGCCGGUUUGCCUUGA", "CAAGAAAAAGCCAAACCUGCCGCAAGACAGGGACGAGGAAUCACAGGUUUCUUUGAAAUA--GCCGAGUUGCCUUGA" ]
rfam_14_5_mafft
URS0000D6A3E8_12908_1-228
UUCGUCAACUAAUGGGCUGCUAAUCUUUUUUACUUAAUUGCAGAACUAAAACUGCAUAAGUGGCGAAGUAUUUCAUAGAAACGCUUGGCGCCGCAGGUGUGACUGAACAUGUAUGUAAUGGUCUGGGGCUUCUGCAAUGGACUGGGGCUUAAGUGAACAGUCUGCAAAAUACAUAGGGUGAACAAAUUUAGGCAAAAGCUGAUGGGACGGCGCUCCUGUCAGCUUUUU
(((((((...............................(((((..[[[[[.)))))....)))))))((((((.......((((((({{{{{{)))))))(((((..(((..........................................)))..)))))....))))))..............]]]]]....(((((((((((.}}}}}}).))))))))))...
[ "URS0000D6A3E8_12908/1-228", "URS0000D65AE4_12908/1-218" ]
[ "UUCGUCAACUAAUGGGCUGCUAAUCUUUUUUACUUAAUUGCAGAACUAAAACUGCAUAAGUGGCGAAGUAUUUCAUAGAAACGCUUGGCGCCGCAGGUGUGACUGAACAUGUAUGUAAUGGUCUGGGGCUUCUGCAAUGGACUGGGGCUUAAGUGAACAGUCUGCAAAAUACAUAGGGUGAACAAAUUUAGGCAAAAGCUGAUGGGACGGCGCUCCUGUCAGCUUUUU", "UUCGUCAGCUAAUGG---GCUAAUCUU------UUAUUUGCAGAACUAAGACUGCGUAAGUGACGAAAUAUUUUAUAGAAG...
rfam_14_5_mafft
URS0000D6A3F6_12908_1-167
CAUGAUGAAACAUAUAAUUACGUAUGUUUUGGAUUGUAUAGAAGGUAGUCGCAGUCGCCUCAAACCUAUUUGAUAUGAUUUUAAAUAAUCCGCUGUCAAAAGAAUUGGAAAAACAAAUUCUUUAGAAUUUGGAAAAGUUUAAAAAUUUUAAAUUUUUAACUAACUGU
.....(((((((............)))))))...........((((....[[[[..))))....((..(((((((.((((......))))...)))))).).....)).....(((((........)))))....((((.((((........)))).))))..]]]]
[ "URS0000D6A3F6_12908/1-167", "URS0000D6C4A4_12908/1-165", "URS0000D686A3_12908/1-165", "URS0000D6AEE6_12908/1-165", "URS0000D66749_12908/1-167", "URS0000D6A44D_12908/1-157", "URS0000D6C248_12908/1-157", "URS0000D6C081_12908/1-157", "URS0000D66E38_12908/1-157", "URS0000D68F82_12908/1-154" ]
[ "CAUGAUGAA--ACAUAUAAUUACGUAUGUUUUGGAUUGUAUAGAAGGUAGUCGCAGUCGCCUCAAACCUAUUUGAUAUGAUUUUAAAUAAUCCGCUGUCAAAAGAAUUGGAAAAACAAAUUCU-UUAGAAUUUGGAAAAGUUUAAAAAUUUUAAAUUUUUAACUAACUGU", "CAUGAUGAA--ACAUAUAAUUACGUAUGUUUUGGAUUGUAUAGUGGGUAGUCGCAGUCACCUCACACCUGUUUAAUAUGAUUUUAAAUAAUCCGCUGUUGAAUAAA--AUGAAAACAAAUUCU-UUAGAAUUUGGAAAA...
rfam_14_5_mafft
URS0000D6A402_12908_1-72
CUUUGGCUAUCCAAAGCGUCGCCGGUGCCACGGAGUUAGGCCGUGGGUUCCAGAUUGUGAAAAUGCCCGGAG
((((((....)))))).....((((..((((((.......))))))....................))))..
[ "URS0000D6A402_12908/1-72", "URS0000D66D1F_12908/1-71" ]
[ "CUUUGGCUAUCCAAA----GCGUCGCCGGUGCCACGGAGUUAGGCCGUGGGUUCCAGAUUGUGAAAAUGCCCGGAG", "-----GCGGAUAAAAUCCGCCGUCGCCGGUGCCACGGAGUUAGGCCGUGGGGUCCAGAUUGUGAAAAUGCCCGGAG" ]
rfam_14_5_mafft
URS0000D6A404_12908_1-98
GUCAGCCCAGGGUCAAGUUUGGAAGUGGUCAUCCAAGGUAAGUGCGGACAAAGUCCGCCGCCACUUCUCCAAAAAGGGCUUGACCUUAGGGUGGAGGA
.....((((..((((.....(((((((((............(.(((((.....)))))))))))))))((......))..))))..).))).......
[ "URS0000D6A404_12908/1-98", "URS0000D6C0FA_12908/1-97", "URS0000D66E11_12908/1-96", "URS0000D6C4F9_12908/1-97", "URS0000D66501_12908/1-97" ]
[ "GUCAGCCCAGGGUCAAGUUUGGAAGUGGUCAUCCAAGGUAAGUGCGGACAAAGUCCGCCGCCACUUCU-CCAAAAAGGGCUUGACCUUAGGGUGGAGGA", "-UAAGCCCGAGGUCAAGCUUGGAAGUGGUCAUCCAAUGUAAGUGCGUUCUUUUUCCGCCGCCACUUCU-CCCAAAAGGGCUUGACCUUAGGGUGGAGGA", "GUUAGCCCAGGUCCAAGUCUGGAGAUGGUCAUCCAAGGUAAGUGUGUCCAUAGGACACCGCCA--UUC-CCAAAAGAGGCUUGGUCUUAGGGUGGAGGC", "...
rfam_14_5_mafft
URS0000D6A41F_12908_1-122
CUAGAAGUAUCUUACUAUUAUUAUAACCCAAUAUAAUAUGAAUACUCGUGUAUAGCGUAGCUUUCCUUAAUUAGGAGCAGUGAUAUUAUAUCAUGUAGGCGCAGAGAUGUAAGAACUUCUAA
.((((((..((((((......((((......))))((((((....)))))).............(((.....))).....((((.....))))...............)))))).)))))).
[ "URS0000D6A41F_12908/1-122", "URS0000D6D098_12908/1-121", "URS0000D6D24F_12908/1-121", "URS0000D659D0_12908/1-121", "URS0000D6D241_12908/1-121" ]
[ "CUAGAAG-UAUCUUACUAUUAUUAUAACCCAAUAUAAUAUGAAUACUCGUGUAUAGCGUAGCUUUCCUUAAUUAGGAGCAGUGAUAUUAUAUCAUGUAGGCGCAGAGAUGUAAGAACUUCUAA", "CAAGAGGAUAUCUUACUAUUAUUACAACCCAAUGUAAUAUGAAUAUUCGUGUAUAGCGUAGCUUCUCUUAAUUAGAGGCAGUGAUA--AUAUCAUGUAGGCGCAGAAAUGUAAGAACCUCUGG", "CUAGAGGACAUCUUACUAUUAUUACAACCCAAUGUAGUAUGAAUACUCGUGUAUGGC...
rfam_14_5_mafft
URS0000D6A429_12908_1-96
GUCAGCCCCCAUCCUAAGCAGGCCAUCCACGGUAAGAGUUCCCAUAGGGAACCGCCUGCUUGGGUGCCCAAAAGGGCAUGUUGGGGGACAGGAGGA
....(((((((...(((((((((............(.(((((.....)))))))))))))))..(((((....)))))...)))))).).......
[ "URS0000D6A429_12908/1-96", "URS0000D6C315_12908/1-96", "URS0000D6CDE0_12908/1-96", "URS0000D6D289_12908/1-96", "URS0000D67871_12908/1-96" ]
[ "GUCAGCCCCCAUCCUAAGCAGGCCAUCCACGGUAAGAGUUCCCAUAGGGAACCGCCUGCUUGGGUGCCCAAAAGGGCAUGUUGGGGGACAGGAGGA", "GUCAGCCCCCAUCCUAAGCAGGUCAUCCAGGGUAAGAGUUCCCAAAGGGAACCGCCUGCUUAGGUGCCCAAAAGGGCAUGUUGGGGGACAGGAGGA", "GUCAGCCCCCAUCCUAAGCAGGCCAUCCAAGGUAAGAGUUCCCAAAGGGAACCGCCUGCUUAGGUGCCCAAAAGGGCAUGUUGGGGGACAGGAGGA", "GUCAGCCCC...
rfam_14_5_mafft
URS0000D6A42F_12908_21-75
UUAGUAAUGUGGCCUAAGACAGUUGCAAGCCUGUUUGAAAAACACAGAGCACUAA
((((...((((((.....[[[..{{{..)).]]]........))))..}}}))))
[ "URS0000D6A42F_12908/21-75", "URS0000D68E73_12908/1-50" ]
[ "UUAGUAAUGUGGCCUAAGACAGUUGCAAGCCUGUUUGAAAAACACAGAGCACUAA", "UUCUUAAUGUGGCCAAAGACAGUUGCAAGCCUGU-----AAACACAGAGCAAGAA" ]
rfam_14_5_mafft
URS0000D6A435_674977_1-48
GAAGGCUGAACUCCGUGCAAAAAAACGCGAUGAAGUGUUGCUCGGAGU
..........(((((.(((...................))).))))).
[ "URS0000D6A435_674977/1-48", "URS0000D682F1_1238450/1-46", "URS0000D68F45_12908/1-46", "URS0000D69C08_12908/1-46", "URS0000D69C08_1269942/1-46", "URS0000D6C86A_1219065/1-46", "URS0000D67318_1338034/1-47", "URS0000D6A1CD_1300351/1-47", "URS0000D660CD_1234592/1-47", "URS0000D6BAAE_314288/1-47" ]
[ "GAAGGCUGAACUCCGUGCAAAAAAACGCGAUGAAGUGUUGCUCGGAGU", "GAAGGCUGAACUCCGUGCA--AAUACACGAUGAAGUGUUGCUCGGAGC", "GAAGGCUGGGCUCCGCGCA--AAUACACGAUGAAGUGUUGCUCGGAGC", "GAAGGCUUGGCUCCGCGCA--AAUACACGAUGAAGUGUUGCUCGGAGC", "GAAGGCUUGGCUCCGCGCA--AAUACACGAUGAAGUGUUGCUCGGAGC", "GAAGGCUGAGCUCCGCGCA--AAUACACGAUGAAGUGUUGCUCGG...
rfam_14_5_mafft
URS0000D6A43C_12908_1-61
GCAGAAGGGCACCGAGUGGUGUUCACUCGGUGUUAAUGCACAGCUCAGGUCCUAAGUCCUG
(((..[[[(((((((((.......)))))))))...)))((....{{{..]]]..)).}}}
[ "URS0000D6A43C_12908/1-61", "URS0000D68B9E_12908/1-54" ]
[ "GCAGAAGGGCACCGAGUGGUGUUCACUCGGUGUUAAUGCACAGCUCAGGUCCUAAGUCCUG", "GCAGAA-GGCACC-----GUCUUCGGACGGUG-UAAUGCACAAAGCAGGUCCUAAGUCCUG" ]
rfam_14_5_mafft
URS0000D6A446_314565_1-84
GGCACAGAUACUGCAUAUGCUAGGGCGGAGCUUCGGUCACGGUGUGGCCGGAGGAGUCGGUUCAGGGACCGACGUCGUCGCUUU
..............................((((((((((...))))))))))..((((((......))))))...........
[ "URS0000D6A446_314565/1-84", "URS0000D66FBD_1182783/1-84", "URS0000D66FBD_340/1-84", "URS0000D68CFB_925775/1-84", "URS0000D65ABA_559736/1-84" ]
[ "GGCACAGAUACUGCAUAUGCUAGGGCGGAGCUUCGGUCACGGUG-UGGCCGGAGGAGUCGGUUCAGGGACCGACGUCGUCGCUUU", "GGCACAGAUACUGCAUAUGCUAGGGCGGAGCUCCGGUCACGGUA-UGGCCGGAGGAGUCGGUACAGGGACCGACGUCGUCGUUUU", "GGCACAGAUACUGCAUAUGCUAGGGCGGAGCUCCGGUCACGGUA-UGGCCGGAGGAGUCGGUACAGGGACCGACGUCGUCGUUUU", "GGCACGGAUACUGCAUAUGCUAGGGCGGAGCUUCGGGCAACG...
rfam_14_5_mafft
URS0000D6A45D_12908_1-37
CCUCCCAAGCCUAUCAACGAUGCUCAAACAGGGAGGU
((((((.(((...........)))......)))))).
[ "URS0000D6A45D_12908/1-37", "URS0000D68381_12908/1-37", "URS0000D6A294_12908/1-37", "URS0000D6C722_12908/1-37", "URS0000D6CE9E_596327/1-37" ]
[ "CCUCCCAAGCCUAUCAACGAUGCUCAAACAGGGAGGU", "CCUCCCAUGCCUCUCAUGGAAGCACAAACAGGGAGGU", "CUUACUAAGCCUCUCAACGAUGCUCAAACCUGGAGGU", "CCUGCCAAGCCUCUCAACGAUGCUCAAAUAGGCUGGC", "CCUGCCAAGCCUCUCAACGAUGCUCAAAUUGGCAGGU" ]
rfam_14_5_mafft
URS0000D6A46D_12908_1-94
ACUACCUCCCGCGUGGGAAGCGAGGAGGCCCAGCCCCGGCCAGUUCCGAAAAUCAAACCGAGAAGGCGGCCGGUAGACGCAUCGAAAGCCGCCA
....((((((((.......))).))))).....................................(((((.....((....))....)))))..
[ "URS0000D6A46D_12908/1-94", "URS0000D65871_12908/1-94" ]
[ "ACUACCUCCCGCGUGGGAAGCGAGGAGGCCCAGCCCCGGCCAGUUCCGAAAAUCAAACCGAGAAGGCGGCCGGUAGACGCAUCGAAAGCCGCCA", "ACUACCUCCCGCACGGGAAGCGAGGAGGCACAGCCCCGGCCAGUUCCGAAAAUCAAACCGAGAAGGCGGCCGGUAGACGCAUCGAAAGCCGCCA" ]
rfam_14_5_mafft
URS0000D6A47B_12908_1-92
GAAACCCUGUCCGAUGGUGAGGUCAUCCAAAGGUAAGACUGCCCAGAGGGCAGCGCCUCACCGUCCCGCAAGGGAUAGGACAGGGAGGAGGU
....((((((((...((((((((.............(.(((((.....))))))))))))))(((((....))))).)))))))).......
[ "URS0000D6A47B_12908/1-92", "URS0000D65A3E_12908/1-92", "URS0000D66B50_12908/1-90" ]
[ "-GAAACCCUGUCCGAUGGUGAGGUCAUCCAAAGGUAAGACUGCCCAGAGGGCAGCGCCUCACCGUCCCGCAAGGGAUAGGACAGGGAGGAGGU", "GUCAACCCUGUCCGAUGGUGAGGCCCUCC-ACGGUAAGAGGUGCCAAAGGCACCCGCCUCACCGUCCCGCAAGGGAUAGGACAGGGGGGAGGA", "-UGCACCCUGUCCGAUGGUGAGGUCAUCC-AAGGUAAGUCUGCCCAAAGGGCAGCGCCUCACCG-CCCGCAAGGGUAGGGACAGGGGGGAGGU" ]
rfam_14_5_mafft
URS0000D6A480_12908_1-53
UCGGGUUCAUAGCAGACGCCCGGCCACCGCAAGGCAUUUCGCCCAAGCUCUGC
((((((.....[[[[[.)))))).........(((.....))).....]]]]]
[ "URS0000D6A480_12908/1-53", "URS0000D6BA9E_12908/1-53", "URS0000D698E4_319017/1-45" ]
[ "UCGGGUUCAUAGCAGACGCCCGGCCACCGCAAGGCAUUUCGCCCAAGCUCUGC", "UCGGGUCCAAUGCAGUCACCCGGCCGCUUCAAGGCAUUUUGCCCAAGCUCUGC", "GCGGGAUUA-AGCAGACUCCCGGC-------GAGACUUCGGUCCAAGCUCUGC" ]
rfam_14_5_mafft
URS0000D6A485_1219065_1-103
UAUCACCAAGGAAUGUUUUUCUCGCAACAUAUCUUCAGCGAGAGACGGAAUGGACUCGGAGUUGCCACCUUGGCGGACUCAGAAUCAAAAAAUAAAGGAACAG
...................((((((............))))))................(((((((.....))).))))........................
[ "URS0000D6A485_1219065/1-103", "URS0000D68FDB_1187847/1-103", "URS0000D68FDB_1187845/1-103" ]
[ "UAUCACCAAGGAAUGUUUUUCUCGCAACAUAUCUUCAGCGAGAGACGGAAUGGACUCGGAGUUGCCACCUUGGCGGACUCAGAAUCA-AAAAAUAAAGGAACAG", "UAUCACUAAGGAAUGUUUUUCUCGCCAUAUAU-UUCAGCGAGAGACGGAAAGGACUCAGACCAAUCACACUGGUUGGUUUAGAUUCAUAAAAAUAAAGGAACAG", "UAUCACUAAGGAAUGUUUUUCUCGCCAUAUAU-UUCAGCGAGAGACGGAAAGGACUCAGACCAAUCACACUGGUUGGUUUAGAUUCAUAAAAAUA...
rfam_14_5_mafft
URS0000D6A489_12908_1-62
AGUCUACCUGCGGACUUAACAAGGCAGGGGCAGCAAGUCAGAGCGACGACUUAAAACGCUUA
((((...[[[[.)))).......]]]]........((((........))))...........
[ "URS0000D6A489_12908/1-62", "URS0000D67863_12908/1-61", "URS0000D6C979_12908/1-62" ]
[ "AGUCUACCUGCGGACUUAACAAGGCAGGGGCAGCAAGUCAGAGCGACGACUUAAAACGCUUA", "AGUCUACCUGCGGACUUAA-AAGGCAGGGGCAGCAAGUCAGAGCGACGACUUAAAACGCUUA", "AGUCUACCUGCGGACUUAACAAGGCAGGGGCAACAAGUCAGAGCGACGACUUAAAACGCUUA" ]
rfam_14_5_mafft
URS0000D6A48B_12908_1-41
AUGGUGGAUUCUGAAAAACCAUAUAUUGAAAAGAGUAGGAG
.((((....[[[.....))))................]]].
[ "URS0000D6A48B_12908/1-41", "URS0000D6C55D_12908/1-35", "URS0000D664C6_12908/1-35", "URS0000D6955E_12908/1-35", "URS0000D6AA57_12908/1-35", "URS0000D6743F_313596/1-35", "URS0000D6CD35_12908/1-36", "URS0000D69A65_12908/1-38", "URS0000D6B4C1_755732/1-35", "URS0000D6B987_12908/1-33" ]
[ "-AUGGUGGAUUCUGAAAAACCAUAUAUUGAAAAGAGUAGGAG", "GAUGGGGUAUCC--GAAAACCAU-----UGAAAGAGUAGGAA", "-UUGGUGGUACCCGAAAAACCAU------AAAAGAGUAGGGG", "AAUGGAAUUUCC--GAAAACCAU-----UAAAAGAGUAGGAA", "AAUGGAGUUUCC--GAAAACCAU-----CAAAAGAGUAGGAA", "-CGGGAGGAUUCCGAAAAUCC-G-----GAAAAGAGUAGGAG", "-AUGGAGGAUGCUGAAAAUCCUA----...
rfam_14_5_mafft
URS0000D6A4A4_12908_1-95
GGAUCGGGCGGCGGCCUGUGGGAGGGUCGCCAGGUAUGGAUCCCAGACCCCCUGUUUCGUGAGGGCGUGCCGCCGGGGCCCGACGGCAGAGCGCG
(((((....((((((((......)))))))).......)))))......................(((((.((((........))))...)))))
[ "URS0000D6A4A4_12908/1-95", "URS0000D6CB0D_12908/1-92", "URS0000D6A00D_314271/1-93" ]
[ "GGAUCGGGCGGCGGCCUGUGGGAGGGUCGCCAGGUAUGGAUCCCAGACCCCCUGUUUCGUGAGGGCGUGCCG--CCGGGGCCCGACGGCAGAGCGCG", "-GGCUCGGGAGCGCCCGGUGGGACGGGCG-CAGGAAUGGAGCCCGCCCCCUUCAUUCGUGAGCGGCGCACCG--CCGGGGCCCGACGGCCG-GUGCA", "GGAUCGGGCGGAAACCUGUGGGAAGGUUUCCAGGUAUGGAUCC--GAACCCCCGUUUCG-AACGGCGUGCAGGCCGGUGCCCCGGCGGCCCCGCGC-" ]
rfam_14_5_mafft
URS0000D6A4A7_12908_1-97
AGAUCGGGAGGCACUCUACGGGAAGUGUGCCGGGAAUUGAUCGUAACUUGUUGCUGUCUCAUUGGGGAACGCGACCGGUGCCCGACGGUUUCGUGUU
.((((....(((((.((......)).))))).......)))).........................((((((((((........)))))..)))))
[ "URS0000D6A4A7_12908/1-97", "URS0000D6B112_1366046/1-96", "URS0000D6B112_12908/1-96", "URS0000D6AD24_12908/1-95", "URS0000D68936_12908/1-95", "URS0000D6AB48_12908/1-95" ]
[ "AGAUCGGGAGGCACUCUACGGGAAGUGUGCCGGGAAUUGAUCGUAACUUGUUGCUGUCUCAUUGGGGAACGCGACCGGUGCCCGACGGUUUCGUGUU", "AGAUCGGGAGGCACUCUACGGGAAGUGUGCCGGGAAUUGAUCG-AACUUUUUGCUGUCUCAUUGGGGAACGCGACCGGUGCCCGACGGUUUCGUGUU", "AGAUCGGGAGGCACUCUACGGGAAGUGUGCCGGGAAUUGAUCG-AACUUUUUGCUGUCUCAUUGGGGAACGCGACCGGUGCCCGACGGUUUCGUGUU", "AGAUCG...
rfam_14_5_mafft
URS0000D6A4AC_12908_1-133
UGCGAUGAGUCGAGAGGUCAGGCAGCCGACCCUUGUUUGGCUGCCCCGCGCGAGCGGAAAUGACAUUUCGAGCGGGGCCCGUUAACUUGCCGGAUUGCAAGGGGCCUGGCAAUGACGAAAGUGGACGUUCGUC
................((((((((((.............))))))((((....))))...))))...........(((((.....(((((......))))))))))........((((..........)))).
[ "URS0000D6A4AC_12908/1-133", "URS0000D66158_12908/1-133", "URS0000D66158_1130798/1-133", "URS0000D65E80_575594/1-116" ]
[ "UGCGAUGAGUCGAGAGGUCAGGCAGCCGACCCUUGUUUGGCUGCCCCGCGCGAGCGGAAAUGACAUUUCGAGCGGGGCCCGUUAACUUGCCGGAUUGCAAGGGGCCUGGCAAUGACGAAAGUGGACGUUCGUC", "UGCGAUGAGUCGAGAGGUCAGGCAGCCGACCCUUGUUUGGCUGCCCCGCGCGAGCGGAAAUGACAUUUCGAGCGGGGCCCGUUAACUUGCCGGAUUGCAAGGGGCCUGGCAAUGGCGAAAGUGGACGUUCGUC", "UGCGAUGAGUCGAGAGGUCAGGCAGCCGACCCUUGUU...
rfam_14_5_mafft
URS0000D6A4B2_12908_1-181
ACAUCUGGCGCAGAAUCACUCCACCAACAUGAUCUGCGUACAAUGAAAAAGGAGGUAUGUCCCUUGCCGCGUGGCUCGCGGUGCGGCAGUGUGGAGACCUGUCGUAAUGCGUCACGUCCCUCCGCGGACGGACGCGAGGCGGAUACGGGUGGGCCGUUCCGCCAGAGCUGAGAGUAUGUCC
.......((((((.((((...........))))))))))...........................((((.[[[[[[))))((((((((.((....))))))))))..(((((.(((..........))))))))..((((((....(((..)))..)))))).]]]]]]...........
[ "URS0000D6A4B2_12908/1-181", "URS0000D68E7A_12908/1-177" ]
[ "ACAUCUGGCGCAGAAUCACUCCACCAACAUGAUCUGCGUACAAUGAAAAAGGAGGUAUGUCCCUUGCCGCGUGGCUCGCGGUGCGGCAGUGUGGAGACCUGUCGUAAUGCGUCACGUCCCUCCGCGGACGGACGCGAGGCGGAUACGGGUGGGCCGUUCCGCCAGAGCUGAGAGUAUGUCC", "AUAUUUGGCGCAGAUUCACUCCACU-CUAUGGACUGCGCACAAU-AAAAAGGAGGUAUGUCCC-UGCCGCGUGGCUCGCGGUGCGGCAGUGUGGAGACCUGUCGUAAUGCGUCACGUCCCU-UGCGGG...
rfam_14_5_mafft
URS0000D6A4B3_502347_1-81
GUUAUGAUGGCUUCGCUAGCCUCAGUAAAUUCUUACUCCGGCGGUGCGCAACUCGUGCGCGUGAACCACUAUCUGAAUGCU
..............(((.(((..((((......))))..))))))(((((.....))))).....................
[ "URS0000D6A4B3_502347/1-81", "URS0000D69C2E_12908/1-81", "URS0000D6C7FB_300269/1-81", "URS0000D6C7FB_300268/1-81", "URS0000D6C4D7_585397/1-81", "URS0000D6BA36_12908/1-81", "URS0000D6BA36_656393/1-81", "URS0000D6BA36_373384/1-81", "URS0000D6BA36_358708/1-81", "URS0000D6BA36_749537/1-81" ]
[ "GUUAUGAUGGCUUCGCUAGCCUCAGUAAAUUCUUACUCCGGCGGUGCGCAACUCGUGCGCGUGAACCACUAUCUGAAUGCU", "GUUAUGAUGGCGUCGCUAGCCUCAGUAAAUCCUUACUCCGGCGGUGCGCAACCCGUGCGCGUGAACCACUAUAUGAAUGCU", "GUUAUGAUGGCGUCGCUAGCCUCAGUAAAUCCUUACUCCGGCGGUGCGCAACCUGUGCGCGUGAACCACUAUCUGAAUGCU", "GUUAUGAUGGCGUCGCUAGCCUCAGUAAAUCCUUACUCCGGCGGUGCGCAACCU...
rfam_14_5_mafft
URS0000D6A4C4_12908_1-76
GUCCGUUUCCCUGCUUGCACCCGUGUGGGUGGGCUGUGACCUUCGAGGUAGGGGAAACAAUACAUUUCAAAGAGGC
....(((((((......(((((....))))).......(((.....)))..)))))))..................
[ "URS0000D6A4C4_12908/1-76", "URS0000D686B7_12908/1-74", "URS0000D6B7DF_12908/1-75", "URS0000D6ABAE_59374/1-75", "URS0000D6ABAE_12908/1-75", "URS0000D67E99_12908/1-75", "URS0000D6A3BB_12908/1-75", "URS0000D666D0_12908/1-75", "URS0000D6C23C_12908/1-75", "URS0000D6B817_12908/1-75" ]
[ "GUCCGUUUCCCUGCUUGCACCCGUGUGGGUGGGCUGUGACCUUCGAGGUAGGGGAAACAAUACAUUUCAAAGAGGC", "GUUCGUUUCCUCGCUUGCACCCGUCCGGGUGGGCUAUGACCA-UAAGGUAAGGGAAAC-AUCCAUUCACAAGAGGC", "GGCCGCUUCCCCGCUUGCACCCGCAUGGGUGGGCUACGACCC-CGAGGUAAGGGAAGCAAAACAUUCCGAAGAGGC", "GUCCACUUCUCCGCUUGCACCCGUAUGGGUGAGCUACGGCCUUCGAGGCAAGGGAAGU-AUUCAUUUCA...
rfam_14_5_mafft
URS0000D6A4CF_12908_1-56
CAGGAGCUGGUCAAUGUCAUUACCCCUGAACUUGGAUAUGGGAAUACCGGUGCAGA
.....((((((.....((((...((........))..))))....)))))).....
[ "URS0000D6A4CF_12908/1-56", "URS0000D66C9A_12908/1-56", "URS0000D6AC6F_525362/1-56", "URS0000D67017_525362/1-56" ]
[ "CAGGAGCUGGUCAAUGUCAUUACCCCUGAACUUGGAUAUGGGAAUACCGGUGCAGA", "CAGGAGCCGGUCAAUGUCAUUACCCCUGAAUUGGGAUAUGAGAAUACCGGUGCAGA", "CAGGAGCCGGUCAAUGUCAUUACCCCUGAAUUGGGAUAUGAGAAUAUCGGUGUGGA", "CAGGAGCCGGUCAAUGUCAUUACCCCUGAACUUGGAUAUGGGAAUACCGGUGCAGA" ]
rfam_14_5_mafft
URS0000D6A4D7_12908_1-73
GGCACAAAUCUCGCUAAGUAAAUCACUGCAAGGUAACCAACGGCGGUUGCCCCACCUACGACAAAGACGUCGC
...............................(((((((......)))))))......................
[ "URS0000D6A4D7_12908/1-73", "URS0000D67ABC_381754/1-70", "URS0000D6D15A_1402575/1-70", "URS0000D6D15A_1315978/1-70", "URS0000D66BE5_1402548/1-70", "URS0000D6D1E5_12908/1-71", "URS0000D684FC_12908/1-72", "URS0000D67FFB_12908/1-71", "URS0000D65F2C_12908/1-71", "URS0000D67A46_12908/1-70" ]
[ "GGCACAAAUCUCGCUAAGUAAAUCACUGCAAGGUAACCAACGGCGGUUGCCCCACCUACGACAAAGACGUCGC", "GGCAAAGAGCUUGCUAAGU-CCAGCCUGA-CGGUAGCCAACGGCGGUUACCCCUCCC-CGACAAAGACGUCGC", "GGCAAAGAGCUUGCUACGU-CCUGCCAGA-CGGUAGCCAACGGCGGUUACCCAUCCC-CGACAAAGACGUCGC", "GGCAAAGAGCUUGCUACGU-CCUGCCAGA-CGGUAGCCAACGGCGGUUACCCAUCCC-CGACAAAGACGUCGC", ...
rfam_14_5_mafft
URS0000D6A4FF_1245471_1-148
CGUCGCUGUCGGUUCCCGUGGACCGACAGACCGCGAGCACUCAGCUCCGGACCGAAGAACACAAGCGGCGGCCUCCCCCCGAAGCAGAGGCCGGCCUAAUAAGAAAUUUCGGAAGUACGCGCACCUCCGGCCGAGGUGCUGAACCCGC
.....((((((((((....)))))))))).(((.((((.....))))))).....................................................................((((((((.....))))))).).......
[ "URS0000D6A4FF_1245471/1-148", "URS0000D6A2D6_1149133/1-147" ]
[ "CGUCGCUGUCGGUUCCCGUGGACCGACAGACCGCGAGCACUCAGCUCCGGACCGAAGAACACAAGCGGCGGCCUCCCCCCGAAGCAGAGGCCGGCCUAAUAAGAAAUUUCGGAAGUACGCGCACCUCCGGCCGAGGUGCUGAACCCGC", "CGUCGCUGUCGGUUCCCGUGGAUCGACAGACCGUGGGCACUCCGCCCCGGACCGAAUAACACAAGCGGCAGCCUCCCCCCG-AGUCGAGGCUGGCCUAAUAAGAAAUUUCGGAAGUACGCGCACCUCCGGUCGAGGUGCAGAACCCGC" ]
rfam_14_5_mafft
URS0000D6A502_12908_1-63
GCUUUCAACAUCCCCGUCCGCCACUCCGCGCACGUACCAUGCAGAGCCGGCUGGACUGAAGGC
(((((((........(((((.(.(((.((...........)).)))...).))))))))))))
[ "URS0000D6A502_12908/1-63", "URS0000D6C844_12908/1-57", "URS0000D6D3A8_12908/1-55", "URS0000D68C11_12908/1-56", "URS0000D6D3AE_12908/1-55", "URS0000D6CAA3_12908/1-54", "URS0000D6A1EF_12908/1-56", "URS0000D699DA_12908/1-58", "URS0000D69C1C_12908/1-52", "URS0000D65785_12908/1-52" ]
[ "GCUUUCAACAUCCCCGUCCGCCACUC-CGCGCACGUACCAUGCAGAGCC-GGCUGGACUGAAGGC", "GCUUUCAACAUCCCCGUUCGCCGCGC-AUGGCGCAG-CCA-----GGCC-GGUAGAACUGAAGGC", "GCUUUCAACAUCCCCGUUCGCCGCG--CCAGCACCU-UCG------ACC-GGCUGAACUGAAGGC", "GCUUUCAACAUCCCCGUUCGCCGCGC-CCAGCACCA-UCA------GCC-GGUAGAACUGAAGGC", "GCUUUCAACAUCCCCGUUCGCCGCG--CCAG...
rfam_14_5_mafft
URS0000D6A506_444178_1-39
CCGUUUAACUCGUUUCCUCCUUGAAGGAAACUACUGGAG
...........(((((((......)))))))........
[ "URS0000D6A506_444178/1-39", "URS0000D6A506_470137/1-39", "URS0000D6A506_520449/1-39", "URS0000D6A506_520456/1-39", "URS0000D6A506_470735/1-39", "URS0000D6A506_693750/1-39", "URS0000D6A506_575591/1-39", "URS0000D6A506_483179/1-39", "URS0000D6A506_520458/1-39", "URS0000D6A506_520489/1-39" ]
[ "CCGUUUAACUCGUUUCCUCCUUGAAGGAAACUACUGGAG", "CCGUUUAACUCGUUUCCUCCUUGAAGGAAACUACUGGAG", "CCGUUUAACUCGUUUCCUCCUUGAAGGAAACUACUGGAG", "CCGUUUAACUCGUUUCCUCCUUGAAGGAAACUACUGGAG", "CCGUUUAACUCGUUUCCUCCUUGAAGGAAACUACUGGAG", "CCGUUUAACUCGUUUCCUCCUUGAAGGAAACUACUGGAG", "CCGUUUAACUCGUUUCCUCCUUGAAGGAAACUACUGGAG", "...
rfam_14_5_mafft
URS0000D6A50A_12908_1-150
CGUCGCUGCCACUUCACGGGAAGCUGGCAGACCUGGGGCCCUCCGCCCCGGGCCGAAGAACAGACAAGCGCUGGCCGCCCCUCAUGACGGGCGCCAGCCCAACAAGAAAUUUCGGAUGUACGCAUGUUCCAGGAUGGAGCAUGAACCCCA
.....((((((((((....)))).))))))..(((((((.....))))))).......................................................................((((((((.....)))))))).......
[ "URS0000D6A50A_12908/1-150", "URS0000D6A368_399739/1-149", "URS0000D6A368_1197721/1-149", "URS0000D69726_1248438/1-149", "URS0000D6A5C2_1182590/1-148", "URS0000D667BC_1001585/1-148", "URS0000D6CC74_1225174/1-148" ]
[ "CGUCGCUGCCA-CUUCACGGGAAGCUGGCAGACCUGGGGCCCUCCGCCCCGGGCCGAAGAACAGACAAGCGCUGGCCGCCCCUCAUGACGGGCGCCAGCCCAACAAGAAAUUUCGGAUGUACGCAUGUUCCAGGAUGGAGCAUGAACCCCA", "CGUCGCUGCCG-CGCUCACCAGAGGCGGCAGACCGGGG-CCCACCGCCCCGGACCGAAGAACAUAUAAGCGCUGGCCCACCUUCGAAUCGGGCGCCAGCCCAACAAGAAAUUUCGGAUGUACGCAUGCUCCAGGAAGGAGCAUGAAAUCCC", "C...
rfam_14_5_mafft
URS0000D6A519_1332188_1-63
ACUAUGAACCAUUCUAACGGUUCCUCUACUCGCAAAUGUUGGGACGGUCCCAACCGCUCGCGG
.....(((((........)))))......((((....((((((.....)))))).....))))
[ "URS0000D6A519_1332188/1-63", "URS0000D68F50_12908/1-60" ]
[ "ACUAUGAACCAUUCUAACGGUUCCUCUACUCG--CAAAUGUUGGGACGGUCCCAACCGCUCGCGG", "ACUAUGAACCG----AGCGGUUCCUCUAUUCGUCUGAAUGUCGGGAC-GUCCCGACCGCUCACGA" ]
rfam_14_5_mafft
URS0000D6A525_12908_1-112
AAUCUUUGAAGUGUACGCCGGGUUAGGAACCGGUUUACAUGGAGAUUUACAAAGGUGCGAGGAUUUACCAUAGCCUAACUAGGAACUAUGUUCUGAAAGAAAGUCCUUGAAU
((((......(((((.(((((.[[[[...))))).)))))...))))............(((............]]]]...(((((...)))))..........))).....
[ "URS0000D6A525_12908/1-112", "URS0000D6C995_12908/1-111", "URS0000D65D16_12908/1-111" ]
[ "AAUCUUUGAAGUGUACGCCGGGUUAGGAACCGGUUUACAUGGAGAUUUACAAAGGUGCGAGGAUUUACCAUAGCCUAACUAGGAACUAUGUUCUGAAAGAAAGUCCUUGAAU", "AAUCUUUGAAGUGUGCGCCGGGUUAGGAACCGGUUUACAUGGAGAUUUACAAAGGUGCGAGGAUUUACCAUAGCCUAACUAGGAACUAUGUUCUGAAAGAAAGUCCUUGAA-", "AAUCUUUGAAGUGUACGCCGGGUUAGGAACCGGUUUACAUGGAGAUUUACAAAGGUGCGAGGAUUUCCCAUAGCCUAAC...
rfam_14_5_mafft
URS0000D6A535_12908_1-73
AAGACAGUCUAGGAGUCUAUAAAAUUGUUACUGAAGAGACUAGAACGAAACUUCUUUAAUUAGAAGUCUAACA
.((((..[[[[[..)))).......(((((.......(.]]]]].)...((((((......)))))).)))))
[ "URS0000D6A535_12908/1-73", "URS0000D6AD7D_12908/1-62" ]
[ "AAGACAGUCUAGGAGUCUAUAAAAUUGUUACUGAAGAGACUAGAACGAAACUUCUUUAAUUAGAAGUCUAACA", "AAGACAA-CCAAGAGUCUAUAAAAUGUGUACUGAAGAG-CUUGGACGAAACAUU---------AUGUCUACAC" ]
rfam_14_5_mafft
URS0000D6A53E_12908_1-96
CCUUUGCAGGGGUUUGGAAAGGGGAUCCCCCUUUCACGUUUUGAGGAGGGUGCUCAGGAUGCAGACAAAGCUCCAAAGGCAUCCGUCGAAGGGGUC
..............((.((((((.....))))))))....................(((((..................)))))............
[ "URS0000D6A53E_12908/1-96", "URS0000D6BD67_12908/1-94", "URS0000D6C7AF_12908/1-94" ]
[ "CCUUUGCAGGGGUUUGGAAAGGGGAUCCCCCUUUCACGUUUUGAGGAGGGUGCUCAGGAUGCAGACAAAGCUCCAAAGGCAUCCGUCGAAGGGGUC", "-CUAUUCUGGGGUUU-GGAAGGGGAAUCCCCUUUCCCGGUUUAAGGAGGGUGCUCAGGAUGCAAAUAAAUGUUUCAAGGCAUCCGUCGAAGGGAAC", "-CUAUGCUGGGGUUU-GAAAGGGGAUUCCCCUUUCCCGGUUUAAGGAGGGUGCUCAGGAUGCAGAUCAAAGUCCUGAGGCAUCCGCCGAAGGGAAC" ]
rfam_14_5_mafft
URS0000D6A54F_12908_1-89
GUGAGGAGGCGCCGGUAGGGAGGAAGUCCAUAAUUAAAAUCGGCGCCGACGACGUGCCGCCGAGCGUAGGCGAGGGAGCGAUACAUUGA
.......((((((..((.(((.....))).)).........)))))).......(((..((..((....))..))..))).........
[ "URS0000D6A54F_12908/1-89", "URS0000D6C736_12908/1-89", "URS0000D6C7F8_12908/1-89", "URS0000D69698_12908/1-89", "URS0000D6D1E0_12908/1-89", "URS0000D6C8AE_12908/1-89", "URS0000D68C86_12908/1-89", "URS0000D67F34_12908/1-89", "URS0000D68B46_12908/1-89", "URS0000D67913_12908/1-89" ]
[ "GUGAGGAGGCGCCGGUAGGGAGGAAGUCCAUAAUUAAAAUCGGCGCCGACGACGUGCCGCCGAGCGUAGGCGAGGGAGCGAUACAUUGA", "GUGAGGAGGCACCGUUAUGGACGAAGUCCAUAAUUAAAAUCGGCGCCGACGACGUGCCGCCGAGCGGAGGCGAGGGGGCGAAACAUUUG", "UGAAGGAGGUGCCGUUAUGGACGAAGUCCAUAAUUAAAAUCGGCACCGACGACGUGCCGCCGAGCGGAGGCGAGGGGGCGAUACAUUGA", "UGAAGGAGGCGCCGUUAUGGACGAAGUCCA...
rfam_14_5_mafft
URS0000D6A551_626887_1-70
UGACUGAGUAGAAGCAGUCAGGUCCGGUCUCUGCCUGUUGGCGAACCCGGAUCGGGUCAUUGCUCAUCGC
....((((((..........(((((((...................))))))).......))))))....
[ "URS0000D6A551_626887/1-70", "URS0000D684D3_12908/1-60" ]
[ "UGACUGAGUAGAAGCAGUCAGGUCCGGUCUCUGCCUGUUGGCGAACCCGGA---UCGGGUCAUUGCUCA-UCGC", "AGUCUGAGUAGAAGCAGUCAGG-------------AAUCGCCAGACACGCGACUUCGGGUCAUUGCUCAGUCG-" ]
rfam_14_5_mafft
URS0000D6A561_12908_1-54
CGGUUGGGAGGGCUGCGGCUCGCGGUCCACUGAGGUCAACACCUCACCCGGCUG
((((((((.(((((((.....)))))))..(((((......)))))))))))))
[ "URS0000D6A561_12908/1-54", "URS0000D6A013_12908/1-54", "URS0000D687F8_12908/1-49" ]
[ "CGGUUGGGAGGGCUGC-GGCUCGCGGUCCACUGAGGUCAACACCUCACCCGGCUG", "CGGUUGGGAGGGCUGCAAGUCUGCGGUCCGUUGAGUGU-CUAACUCACCCGGCUG", "CGGUUGGGAGGGCUGC--UUCGGCGGUCCGUUGGGU----UCGCCCACCCGGCUG" ]
rfam_14_5_mafft
URS0000D6A56D_12908_1-102
AAAAGUCAAUGCGGUGAGACAUUUAAAGUACCCGUACAUUCCAGUGUAGAAAGUGACUACACAUUUAAACAAGAAACUGAUUCAAGAAUGUGAAAGGAGAAU
....(((.[[[.[....)))..........].]]].(((((..(((((.........))))).......................)))))............
[ "URS0000D6A56D_12908/1-102", "URS0000D69DF6_12908/1-101" ]
[ "AAAAGUCAAUGCGGUGAGACAUUUAAAGUACCCGUACAUUCCAGUGUAGAAAGUGACUACACAUUUAAACAAGAAACUGAUUCAAGAAUGUGAAAGGAGAAU", "AUUCGUCAAUGCGGUGAGACAUUUAAACUAACCGUACAUUCCAUCGCAGAAAGCGACUGCGGCUUUAUAAAUUAAACUGAUUGAAGAAUGUGAAAGGAGAA-" ]
rfam_14_5_mafft
URS0000D6A575_12908_1-33
AAACCGGAUGCCGAAAAGGUUAUAGAGUAGGCG
.((((....[[[.....))))........]]].
[ "URS0000D6A575_12908/1-33", "URS0000D66045_755732/1-33", "URS0000D68DE9_12908/1-33", "URS0000D684D5_12908/1-33", "URS0000D6ACA9_12908/1-33" ]
[ "AAACCGGAUGCCGAAAAGGUUAUAGAGUAGGCG", "AAAGGGGAUGCCGAAAACCUUAUAGAGUAGGUC", "AAAGCGGUUGCCGAAAAGCUUUUAGAGUAGGCU", "AUAGGGGAUGCCGAAAACCUUUUAGAGUAGGCG", "GGAGCGUAUGCCGAAAAGCUUAUAGAGUAGGCG" ]
rfam_14_5_mafft
URS0000D6A587_12908_1-59
UCGGGGCCAGGCAGAUCCCCGAUGGCUACCCGCCAAGACGGUGUCCCGUCCAAAUCUGC
((((((....[[[[[.))))))..............(((((....)))))....]]]]]
[ "URS0000D6A587_12908/1-59", "URS0000D659E9_12908/1-56", "URS0000D6CB00_12908/1-54", "URS0000D681E4_12908/1-53" ]
[ "UCGGGGCCAGGCAGAUCCCCGAUGGCUACCCGCCAAGACGGUGUCCCGUCCAA-AUCUGC", "-CGGGGCC--GCAGAUGCCCCGCGGCCUUCCGCCAAGACGGUGUCCCGUCCAA-UUCUGC", "UCGGGGCCA-GCAGACUCCCGGCCAUC-----CCAAGGCGGUUCGCCGUCCAAGGUCUGC", "UCGGGAUC--GCAGGCUCCCGGUGCUC-----CCAAGACGGUGUCCCGUCCAAGCGCUGC" ]
rfam_14_5_mafft
URS0000D6A589_12908_1-187
CCUAGCUGACCUGUAGCUAGGUAUCUUUAAGGUGAGAAUCCUUGACAAUCCUGUGGGGCUUAUAUCUUUAUCUCUGAGGAGUUCUUUAUCGCCAUGGUAGUAGAGAAGAACUAUCUACGGUGGAUGGUCUACUGAAUGCUUGGAUGUGUAAGAGAAUAAAGUAUUAGUGCAGACGUUAAAAUCAGGA
.(((((((.....)))))))......((((((.......))))))...(((((....(((.....((((((((...............................................................................)).))))))....)))..............)))))
[ "URS0000D6A589_12908/1-187", "URS0000D6B9C7_12908/1-186", "URS0000D6BA4D_12908/1-119", "URS0000D66E78_12908/1-187" ]
[ "CCUAGCUGACCUGUAGCUAGGUAUCUUUAAGGUGAGAAUCCUUGACAAUCCUGUGGGGCUUAUAUCUUUAUCUCUGAGGAGUUCUUUAUCGCCAUGGUAGUAGAGAAGAACUAUCUACGGUGGAUGGUCUACUGAAUGCUUGGAUGUGUAAGAGAAUAAAGUAUUAGUGCAGACGUUAAAAUCAGGA", "CCUAGCUGACCUGUAGCUAGGUAUCUUUAAGGUGAGAAUCCUUGACAAUCCUGUGGGGCUUAUAUCUUUAUCUCUGAGGAGUUCUUUAUCGCUAUAGUAGUAGAG-AGAACUAUUUACGGUG...
rfam_14_5_mafft
URS0000D6A58B_12908_1-54
CCGCCAGGCCGGGCCCCUCUGGCAACCGCAAGGUUGCGAUGUCGGACUGGAAUU
.....((.((((.........((((((....))))))....)))).))......
[ "URS0000D6A58B_12908/1-54", "URS0000D6A84D_12908/1-54" ]
[ "CCGCCAGGCCGGGCCCCUCUGGCAACCGCAAGGUUGCGAUGUCGGACUGGAAUU", "CGACCAGGCCGGGCCCCUCUGGCAGCCGUAUGGCUGCGAUGUCGGACUGGAAUU" ]
rfam_14_5_mafft
URS0000D6A5BB_12908_1-86
AUCGCAGCGGGAGGCAAUGACGCGCGGUCCACGCAACGGCCGCCUCAGACCGCGCCGAGCCACUGGCGAGACCGACCGCUCGGCAU
((..(.(..((.(((......((((((((........[[.[[[[...))))))))...)))...]]]]...]]..))..).)..))
[ "URS0000D6A5BB_12908/1-86", "URS0000AB71A5_12908/1-85", "URS0000D680CC_12908/1-85", "URS0000D66B36_12908/1-84", "URS0000D6B745_12908/1-86", "URS0000D69732_12908/1-85", "URS0000D6ADBE_12908/1-85" ]
[ "AUCGCA-GCGGGAGGCAAUGACGCGC-GGUCCACG-CAACGGCCGCCUCAGACCGCGCCGAGCCACUGGCGAGACCGACC---GCUCGGCAU---", "-ACGGGUGCGGGAGGCGAUGACACGC-GGCUCGCA-UGACGGCCGCCU-GAGCCGCGCCGAGCCACUGGCGAGACCGA------GCCGCUCUGAU", "-UCCUCUGCGGGAGGCGAUGACGCGU-GGCCCACGCCCCCGGUCGCCC-GGUCCGCGCCGAGCCACUGGCGAGACCGACCGCAGAUCG-------", "-CGACAGGCGGA...
rfam_14_5_mafft
URS0000D6A5BF_12908_1-259
UACUAAGGGCAUCUUUUAUUGGGCUGACCUAACAGCCUUAAGUGAAGCGGUUCAUCAUAGAACUAAUUGCUGAUAACAAUUAGGUUGCUUUAUAUUGUUUGAAGGGGACUUCAACAGUUACCUAGAUUCUAUAGUUAAGGCUUCCGCAAGAAAUCUUAUGUGCGCUGUCUAUUUAACUGUCAAUAUAAUGUAAAUGCAGUGAGCUUUUGGUAAACAAAUAGGGUAAAUUACUUCCGUAUUAUCAGUGCGGAAGUUUUUU
(.((..(..............(((((.[[[[.))))).....)..)).)((((((.......(((((((.{{{{{{))))))).((((.((((...........................................................................................)))).)))).....))))))..............]]]]....(..(((((((((}}}}}}.)))))))))..)..
[ "URS0000D6A5BF_12908/1-259", "URS0000D65C40_12908/1-259" ]
[ "UACUAAGGGCAUCUUUUAUUGGGCUGACCUAACAGCCUUAAGUGAAGCGGUUCAUCAUAGAACUAAUUGCUGAUAACAAUUAGGUUGCUUUAUAUUGUUUGAAGGGGACUUCAACAGUUACCUAGAUUCUAUAGUUAAGGCUUCCGCAAGAAAUCUUAUGUGCGCUGUCUAUUUAACUGUCAAUAUAAUGUAAAUGCAGUGAGCUUUUGGUAAACAAAUAGGGUAAAUUACUUCCGUAUUAUCAGUGCGGAAGUUUUUU", "UACUAAGGGCAUCUUUUAUUGGGCUGACCUAACAGCCUUAAGUGAAGCGG...
rfam_14_5_mafft
URS0000D6A5C6_12908_1-46
AGCCUCAUCAACCUUUCGGUGUAGAUGUUGUCGCAUAGCGAUGGCU
((((.((....((....))......))...((((...)))).))))
[ "URS0000D6A5C6_12908/1-46", "URS0000D6C2D8_12908/1-45", "URS0000D66643_12908/1-45" ]
[ "AGCCUCAUCAACCUUUCGGUGUAGAUGUUGUCGCAUAGCGAUGGCU", "AGCCGCA-CGACCUUCUGGAGUAGUGUUUGUCGCAUAGCGAUGGCU", "AGCCGCA-CGACCUUCUGGAGUAGUGUUUGUCGCAUAGCGAUGGCG" ]
rfam_14_5_mafft
URS0000D6A5D3_12908_1-77
AUAAUGAAACUUCUGUCUGGCUAACGUAGGUUAAGGGGCAGUCCGUAGAGAUCCUAGGGAACGUGAAAUUCGUAUGG
............((((((.................))))))(((.(((.....))).)))(((.......)))....
[ "URS0000D6A5D3_12908/1-77", "URS0000D6B57F_12908/1-77" ]
[ "AUAAUGAAACUUCUGUCUGGCUAACGUAGGUUAAGGGGCAGUCCGUAGAGAUCCUAGGGAACGUGAAAUUCGUAUGG", "AUAAUGAAACUUCUGUCUGGCUAAUGUAGGUUAAGGGGCAGUCCGUAGAGAUCCUAGGGAACGUGAAAUUCGUAUGG" ]
rfam_14_5_mafft
URS0000D6A5DE_12908_1-67
GCUAUCAACAUCCCCGCCGGUUGGGCGCGGCGUUUCUACUAAACCCGCGUAGUGAACCGGCUGUAGC
((((.((........(((((((..((((((..(........)..))))))....)))))))))))))
[ "URS0000D6A5DE_12908/1-67", "URS0000D6577D_12908/1-67" ]
[ "GCUAUCAACAUCCCCGCCGGUUGGGCGCGGCGUUUCUACUAAACCCGCGUAGUGAACCGGCUGUAGC", "GGCUUCAACAUCCCCGCCGGUUGGGCGCGGCGUAGUUUCAAACGCCGCGUAGUGAACCGGCUGAGCC" ]
rfam_14_5_mafft
URS0000D6A5E9_12908_1-60
CGGGUAGACGAAUUGGCCCCGAUUUAAGUCCAGUUCUAAAGUAAAUAAGGAAUUAAAAUG
((((.....[[[[[[[.))))........]]]]]]]........................
[ "URS0000D6A5E9_12908/1-60", "URS0000D67FC8_12908/1-60" ]
[ "CGGGUAGACGAAUUGGCCCCGAUUUAAGUCCAGUUCUAAAGUAAAUAAGGAAUUAAAAUG", "AGGGUAGACGAGCUGGCCCCUAUUGAAGUCCAGUUCUAACGUUUAAUAAGGUAUAUCAUG" ]
rfam_14_5_mafft
URS0000D6A5EB_488537_1-66
ACAAUGAUACUCCCGUUUAAAAUAACGGUAUACCCAUAAGAAUGGGAUAAGGUGAAAUUCCUGUGG
............((((........))))(((.((.........)).)))(((.......)))....
[ "URS0000D6A5EB_488537/1-66", "URS0000D6A122_499175/1-66", "URS0000D6A7BC_451754/1-66" ]
[ "ACAAUGAUACUCCCGUUUAAAAUAACGGUAUACCCAUAAGAAUGGGAUAAGGUGAAAUUCCUGUGG", "AUAAUGAUACUCCCGUUUAAAGUAACGGUAUGCCCAUAAGAAUGGGAUAAGGUGAAAUUCCUGUGG", "AUAAUGAUACUCCCGUUUGAAACAACGGUAUACCCAUAAGAAUGGGAUAAGGUGAAAUUCCUGUGG" ]
rfam_14_5_mafft
URS0000D6A5EF_12908_1-61
CUCUUGGAGAAUUACACCAACCCGAGUAGCUUAGGCAAAAGGGAAUUCGUUGAAGAGAGAA
(((((...(((((.......(((.....(((..)))....))))))))......)))))..
[ "URS0000D6A5EF_12908/1-61", "URS0000D68C7C_12908/1-61" ]
[ "CUCUUGGAGAAUUACACCAACCCGAGUAGCUUAGGCAAAAGGGAAUUCGUUGAAGAGAGAA", "CCUUUGGAGAAUUACACCAACCCAAGUAGCUACGGCAAAAGGGAAUUCGUUGAAGAAGGAA" ]
rfam_14_5_mafft
URS0000D6A5F1_12908_1-87
CCCGAGCCUGCCGGGGCCGCGCAAGCGGAUAAGGGCGGGACACGGAUUAGUCGGGCAGUGCCGUGAUUCAGAAAAACCCCGACUGCC
((((..[[[[[))))..(((....))).......]]]]].(((((....[[[[[......))))).............]]]]]....
[ "URS0000D6A5F1_12908/1-87", "URS0000D65F3A_358220/1-81", "URS0000D6D38F_596153/1-79" ]
[ "CCCGAGCCUGCCGGGGCCGCGCAAGCGGAUAAGGGCGGGACACGGAUUAGUCGGGCAGUGCCGUGAUUCAG-AAAAACCCCGACUGCC", "CCCUAGCCUGGGGGGCC-------GAAAGGAAAGCCAGGACGCGGAUUAGUCGGGCAGUGCCGCGUUUCAGGAAAAACCCCGACAGCC", "CCCUAGCCUGGGGGGCC-------GCAAGGAGUGCCAGGACGCGGAUUAGUCGGGCAGUGCCGCGUUUCAG--AAAACUCCGAACGCC" ]
rfam_14_5_mafft
URS0000D6A5F5_12908_1-48
GAACCAUGAGCUCCGUGCAAAUCGAGUCGAUGAAGCAUUGUGCGGAGC
..........(((((.(((...................))).))))).
[ "URS0000D6A5F5_12908/1-48", "URS0000D66773_12908/1-48", "URS0000D66773_545696/1-48" ]
[ "GAACCAUGAGCUCCGUGCAAAUCGAGUCGAUGAAGCAUUGUGCGGAGC", "GACGAAACAGCUCCGUACAAAUCAAGUUGAUGAAGCAUUGUGCGGAGC", "GACGAAACAGCUCCGUACAAAUCAAGUUGAUGAAGCAUUGUGCGGAGC" ]
rfam_14_5_mafft
URS0000D6A5F9_12908_1-129
AUACAGGCCUCACUUAGAGGCCUUGCUGUGACCUGGGGAGGUUAGGCAUCCAAAUGGGUAGCAGCGGCACCCUUCUGGAGAGACGGUCACCGGAGACCGGGCUUGUCAGACCCGGUCGGGAGCCGUUUU
....(((((((.....))))))).....((((((....))))))....((((...(((..((....)).)).)..))))(((((((........(((((((.........))))))).....)))))))
[ "URS0000D6A5F9_12908/1-129", "URS0000D694F5_12908/1-121", "URS0000D6964B_12908/1-129", "URS0000D6D0B7_12908/1-124" ]
[ "AUACAGGCCUCACUUAGAGGCCUUGCUGUGACCUGGGGAGGUUAGGCAUCCAAAUGGGUAGCAGCGGCACCCUUCUGGAGAGACGGUCACCGGAGACCGGGCUUGUCAGACCCGGUCGGGAGCCGUUUU-", "AUACGGG-----GUUAUUAGAACUCCACUAACCUGGGGAGGUUAGGCAUCCAAAUGGGUAGCAGCGGCACCCUUCUGGAGAGACGGU--CCAGAGGCCGGG-UUGUCAGACCCGGUCGGGAGCCGUUUC-", "AUACAGGCCUCACUUAGAGGCCUUGCUAUGACCUGGGGAGGUU...
rfam_14_5_mafft
URS0000D6A5FC_12908_1-69
UUCGUAAUGCGGCCGUGCUGGUAACGUUCCAGCGCGACGGUCCCAAGCCCGAAAAACGCAGAGGGAGAA
(((....((((((((((((...........)))))).[[..{{{..)).]].....))))..}}}.)))
[ "URS0000D6A5FC_12908/1-69", "URS0000D691FF_12908/23-82" ]
[ "UUCGUAAUGCGGCCGUGCUGGUAACGUUCCAGCGCGACGGUCCCAAGCCCGAAAAACGCAGAGGGAGAA", "UCUCUAAUGCGGCCGU---------GGUUUUCCAUGCCCGUCACAAGCCGGGAAAACGCAGAGUGGAGA" ]
rfam_14_5_mafft
URS0000D6A607_404589_1-60
GGGUGCGGCGCCGGCCGGAAGCCGGCGCCGCAGGCAUCCGGAGCAGUCGGGCCGCUGCUU
....(((((((((.........))))))))).........(((((((......)))))))
[ "URS0000D6A607_404589/1-60", "URS0000D6ABA6_12908/1-50" ]
[ "GGGUGCGGCGCCGGCCGGAAGCCGGCGCCGCAGGCAUCCGGAGCAGUCGGGCCGCUGCUU", "UGGUGCGGCGCUCGC---------GCGCCGCAGGCAU-CGAGUAGGUCGGGCCGCCUACC" ]
rfam_14_5_mafft
URS0000D6A60F_12908_1-84
CAGCAAGCAGGAGGCAACGAACUGUCACCUGUAUUUGGUCACUUGGGUGGCGGGGAGCCAGUAGUGAGACCGGCCUGAAGAAGG
(......((((.(((......((((((((.......[[[[[[[..))))))))...)))...]]]]]..]]..))))......)
[ "URS0000D6A60F_12908/1-84", "URS0000D6C5A7_12908/1-83" ]
[ "CAGCAAGCAGGAGGCAACGAACUGUCACCUGUAUUUGGUCACUUGGGUGGCGGGGAGCCAGUAGUGAGACCGGCCUGAAGAAGG", "AAGCAAGCAGGAGACAACGAACUGCUACGUGUAAUUGGUCACUUGGGUGGC-GGGAGCCAGUAGUGAGACCGGCCUGAACAAGG" ]
rfam_14_5_mafft
URS0000D6A611_12908_1-51
UGCCAUAAGGGGGGACUAUUACCCCUUAUGGCACAUACGUCGCACGUCGCA
(((((((((((...........)))))))))))..................
[ "URS0000D6A611_12908/1-51", "URS0000D67962_12908/1-49" ]
[ "UGCCAUAAGGGGGGACUAUUACCCCUUAUGGCACAUACGUCGCACGUCGCA", "UGCCAUAAGGUCAG--UAUUACCCCUUAUGGCAUGAAUGUCGCAUGUCGCA" ]
rfam_14_5_mafft
URS0000D6A614_12908_1-79
AUCAUGGUACUUCCGGCUUGGACGCGUCACGGCAUCGGCCGGCUCGGCAUCAGAAUGCGGAGAGAUGAAAUUUCUAUGG
............((((((..................))))))(((.(((......))).)))(((.......)))....
[ "URS0000D6A614_12908/1-79", "URS0000D67C86_12908/1-79" ]
[ "AUCAUGGUACUUCCGGCUUGGACGCGUCACGGCAUCGGCCGGCUCGGCAUCAGAAUGCGGAGAGAUGAAAUUUCUAUGG", "AUUAUGGUACUUCCGGCUUGGACGCGUCACGGCAUCGGCCGGCUCGGCAUCAGAAUGCGGAGAGAUGAAAUUUCUAUGG" ]
rfam_14_5_mafft
URS0000D6A616_12908_1-71
UAUCCUUAUAAUCUGGCGGAUUGGCGCUAGAUUAUACACGACCGGACCUUAAUCCGGUGUAUCCAGGGAAA
(.(((((....(((((((......))))))).........((((((......))))))......))))).)
[ "URS0000D6A616_12908/1-71", "URS0000D6BC3C_12908/1-71", "URS0000D6A5E3_12908/1-71" ]
[ "UAUCCUUAUAAUCUGGCGGAUUGGCGCUAGAUUAUACACGACCGGACCUUAAUCCGGUGUAUCCAGGGAAA", "UAUCCUUAUAAUCUAGCUGAUUGGCGCUAGAGUAUCCACGACCGGACCUUAAUCCGGUGUAUCCAGGGAAA", "UAACCUUGUAAUUCGGGGGAUUGGCCCCGGAGUAUCCACGACCGGACCAUAAUCCGGUGCAUCCAGGGAAA" ]
rfam_14_5_mafft
URS0000D6A618_12908_1-48
UCGGGGUAACAGCAGCCUCCCGGUCAGGCUUUACGGCCCAAGCGUUGC
((((((.....[[[[[.))))))...((((....)))).....]]]]]
[ "URS0000D6A618_12908/1-48", "URS0000D6AB0E_12908/1-46", "URS0000D67C7A_12908/1-48" ]
[ "UCGGGGUAACAGCAGCCUCCCGGUCAGGCUUUACGGCCCAAGCGUUGC", "UCGGGACCA-AGCAACCUCCCGAUCAGGCUUC-CGGCCCAAGCGUUGC", "UCGGGGUAACAGCAGCCUCCCGGUCAGGCUUCACGGCCCAAGCGUUGC" ]
rfam_14_5_mafft
URS0000D6A61D_12908_1-117
ACAAUGAUACGCCUGUCUGGCCAUAAUGUUGAGCGUUGAAGCGGGAUUUGGAACGUGAUCCGUCGUAACAAGUGGAGACAGCUCGGAGAGAUCCUCGGAGGGGUGUGAUUCCCGUGG
............((((((.........................................................))))))(((.(((.....))).)))(((.......)))....
[ "URS0000D6A61D_12908/1-117", "URS0000D6B9AA_12908/1-117" ]
[ "ACAAUGAUACGCCUGUCUGGCCAUAAUGUUGAGCGUUGAAGCGGGAUUUGGAACGUGAUCCGUCGUAACAAGUGGAGACAGCUCGGAGAGAUCCUCGGAGGGGUGUGAUUCCCGUGG", "ACAAUGAUACGCCUGUCUGGCCAUAAUGUUGAGCGUUGAAGCGGGAUUUGGAACGUGAUCCGUCGUAACAAGUGGAGGCAGCUCGGAGAGAUCCUCGGAGGGGUGUGAUUCCCGUGG" ]
rfam_14_5_mafft
URS0000D6A61E_12908_1-83
AAUAUUUGAAGUGGAGAAUGUGCUUCCACACACCUGGAGACAGGUCAAAAGAAAUGUAGGAAAGGGUACACCUACCUUAUAUU
(((((..(..(((((....[[[[[))))).((((((....))))).....)....(((((....]]]]].))))))..)))))
[ "URS0000D6A61E_12908/1-83", "URS0000D6B411_12908/1-83", "URS0000D68041_12908/1-83", "URS0000D68041_1262812/1-83", "URS0000D66280_12908/1-80", "URS0000D68742_12908/1-78", "URS0000D67279_12908/1-83", "URS0000D67E39_742737/1-80", "URS0000D680F0_12908/1-80", "URS0000D65FB9_12908/1-79" ]
[ "AAUAUUUGAAGUGGAGAAUGUGCUUCCACACACCUGGAGACAGGUCAAAAGAAAUGUAGGAAAGGGUACACCUACCUUAUAUU", "AGGCAUUGAAGUGGAGAAUGUGCUACCACGCACCUAGAAAUAGGUCAAAAGAAAUGUAGGAAAGGGCACACCUACCAAUUACC", "AGGAAUUGAAGUGGAGAUAGUGCUUCCACGCACCUAGAAAUAGGUCAAAAGAAAUGUAGGAAGGGGCACACCUACCAAUUACC", "AGGAAUUGAAGUGGAGAUAGUGCUUCCACGCACCUAGAAAUAGGUCAA...
rfam_14_5_mafft
URS0000D6A624_12908_1-179
GUAUACUCAGUCUGUGAAGAUAGAGUAUACGUCCUCAGAAAAUGACAAGCAUGUGGGGCGUAAGUAUAUACAGCAAGGUUAUCGUUUAUCCUCAUUUAUACAGGUUAAUUGCGCAGCUGUAAAAAACGGGAUUGAUAGAAUAGAUGGUAUAUAUGAUCGUGCGGACGUUAAAAUCAUGU
......((.((((....)))).))..........(((.....)))...(((((....(((...((((((((.(.......................................................................).))))))))...)))..............)))))
[ "URS0000D6A624_12908/1-179", "URS0000D6CF99_12908/1-179", "URS0000D69C29_12908/1-179", "URS0000D67E31_12908/1-179", "URS0000D6B7AA_12908/1-178", "URS0000D6C648_12908/1-178", "URS0000D660C8_12908/1-178", "URS0000D6B5F7_12908/1-178", "URS0000D688E2_12908/1-178" ]
[ "GUAUACUCAGUCUGUGAAGAUAGAGUAUACGUCCUCAGAAAAUGACAAGCAUGUGGGGCGUAAGUAUAUACAGCAAGGUUAUCGUUUAUCCUCAUUUAUACAGGUUAAUUGCGCAGCUGUAAAAAACGGGAUUGAUAGAAUAGAUGGUAUAUAUGAUCGUGCGGACGUUAAAAUCAUGU", "GUAUACUCAGUCUGUGAAGAUAGAGUAUACGUCCUCAGAAAAUGACAAGCAUGUGGGGCGUAAGUAUAUACAGCAAGGUUAUCGUUUAUCCUCAUUUAUACAGGUUAAUUGCGCAACUGUAAAAAACGGG...
rfam_14_5_mafft
URS0000D6A63C_12908_1-92
GUCAGCCCCGCCUAUCGCCACGGUCAUUCAGGGUAAGUCCGUCCAUAGGGCGGCGCCGUGGCGGGUUUGAUGGGAAAGGCGGGGUAGGAGGA
....(((((((((..(((((((((............(.(((((.....)))))))))))))))..(((.....)))))))))))).......
[ "URS0000D6A63C_12908/1-92", "URS0000D67BA1_12908/1-92" ]
[ "GUCAGCCCCGCCUAUCGCCACGGUCAUUCAGGGUAAGUCCGUCCAUAGGGCGGCGCCGUGGCGGGUUUGAUGGGAAAGGCGGGGUAGGAGGA", "GUCAGCCCCGCCUAUCGCCACGGUCAUACAGGGUAAGUCCGUCCAUAGGGCGGCGCCGUGGCGGGUUUGAUGGGAAAGGCGGGGUAGGAGGA" ]
rfam_14_5_mafft
URS0000D6A63D_12908_1-72
GCUUUCAACAACCCCGUUCCAACGCGAGCUGAGACGAAGCAUUUUUGUCGGCGAGUUAUUGGAGCUGGAAGC
(((((((........(((((((.((..(((((.(...........).)))))..))..))))))))))))))
[ "URS0000D6A63D_12908/1-72", "URS0000D69D5F_12908/1-72", "URS0000D6B78C_12908/1-72" ]
[ "GCUUUCAACAACCCCGUUCCAACGCGAGCUGAGACGAAGCAUUUUUGUCGGCGAGUUAUUGGAGCUGGAAGC", "GCUUUCAACAACCCCGUUCCAACGCGAGCUGACACGAAGCAUUUUUGUCGGCGCGUUAUUGGAGCUGAAAGC", "GCUUUCAACAACCCCGUUCCAACGCGAGCUGACACGAAGCAUUUUUGUCGGCGCGUGAUUGGAGCUGAAAGC" ]
rfam_14_5_mafft
URS0000D6A643_12908_1-85
AUUUGCGGCCUAUGGUGCGGAGCGCGGAAACGCCCCGGCGCUUGCUAACACUGAAAAGCGUAGGACACCUAAGGGCUGCAUUUUU
(..((((((....(((((((...(((....))).)))((((................))))....)))).....))))))..)..
[ "URS0000D6A643_12908/1-85", "URS0000D6753C_12908/1-73", "URS0000D6AC56_12908/1-71", "URS0000D69C6C_12908/1-83", "URS0000D6B152_12908/1-85", "URS0000D68E2E_12908/1-85" ]
[ "AUUUGCGGCCUAUGGUGCGGAGCGCGGAAACGCCCCGGCGCUUGCUAACACUGAAAAGCGUAGGACACCUAAGGGCUGCAUUUUU", "---UGCCGUCUAUGGUGUGGGUAGCGGAAACGCCCCAGCGCUU------CAUGUAGAGCGUAGGACACCUAAUGACGGCUUU---", "----GCCGUCUAUGGUGUGGGCAGCGGAAACGCCCCAGCGCUU------GCAUUAGAGCGUAGGACACCUAAUGACGGCUU----", "AUUUGCGACCUAUGGUGCGGAGCGCGGAAACGCCCCGGCGCU...
rfam_14_5_mafft
URS0000D6A671_12908_1-135
GGCCCAAACUUAGUAGCCCCAAGUGGGUAAAAGGCAUGGUUAUUCAAAACCGUUCAAAGCAUACGACGCUCGUCGUUAGGUUUUGCUUUGAACGGUCGCACGCAGGAAUGUGUGUGGGGUUCCGGAAACGGGAUC
((((....(((..((............))..)))...))))........(((((((((((.(..(((.......)))..)....))))))))))).((((((((....)))))))).(((((((....)))))))
[ "URS0000D6A671_12908/1-135", "URS0000D68560_12908/1-127" ]
[ "GGCCCAAACUUAGUAGCCCCAAGUGGGUAAAAGGCAUGGUUAUUCAAAACCGUUCAAAGCAUACGACGCUCGUCGU-UAGGUUUUGCUUUGAACGGUCGCACGCAGGAAUGUGUGUGGGGUUCCGGAAACGGGAUC-", "GGCCCAAACUGAGUAGC------AAUGCGAAAAGCAUGGUCGUUCAAACCCUGGAAAAGCAUACGACGCUCGUCGUCUAGGUUUUGCUUUUCCAGGUCAUAUGCAGGAAUGCAUGUGGGGUCCGCAA----GGAUCC" ]
rfam_14_5_mafft
URS0000D6A677_12908_1-72
UUUCGGGAGGGGUAGACGUUAAAGAAUACCAACAAAAACUACUUACGAGAGGCAACCUCGUAUAAAAGCGUA
(.((....[[.[[.)).).......]].]]...............((((.......))))............
[ "URS0000D6A677_12908/1-72", "URS0000D66082_12908/1-71", "URS0000D67397_12908/1-70" ]
[ "UUUCGGGAGGGGUAGACGUUAAAGAAUACCAACAAAAACUACUUACGAGAGGCAACCUCGUAUAAAAGCGUA", "UUUUGGGAGGUACAGACGUUAAAGAAUACCAAC-AAAACUACUUACGAGAGGCAACCUCGUACAAAAGCGUA", "UUUCGGGAGGAGCAGACGUAAAAGAACACCAAC-AAAACUACUUAUGAGAAGCAACCUCGUA-AAAAGCGUA" ]
rfam_14_5_mafft
URS0000D6A67A_12908_1-100
AUAAUGAUACUUCCGUACAGCCUUAGUCCGUGUGAUGAUGUAGCACCGCUGGCAAAGGGGACGGCUGGGUGAGAACCAGGCGGGGGGGAGAUUCCCAUGA
............((((.(........................................).))))(((..((.....))..)))(((.......)))....
[ "URS0000D6A67A_12908/1-100", "URS0000D666A6_12908/1-100" ]
[ "AUAAUGAUACUUCCGUACAGCCUUAGUCCGUGUGAUGAUGUAGCACCGCUGGCAAAGGGGACGGCUGGGUGAGAACCAGGCGGGGGGGAGAUUCCCAUGA", "AUAAUGAUACUUCCGUACAGCCUUAGUCCGUGUGAUGAUGUAGCACCGCUGGCAAAGGGUACGGCUGGAUGAGAACCAUUCAGGGGUGAGAUUCCCAUGA" ]
rfam_14_5_mafft
URS0000D6A67E_12908_1-92
CACCCCUUGGUGCAGAUAAGCCAUCAGGACACGGUUUAGUACACUCCCGCAACCUGCGGGGGGCGAUGGAAAGACCGUGAGGCUAAAAGGAG
((((....))))......((((.......(((((((.....(((((.............)))....))....))))))).))))........
[ "URS0000D6A67E_12908/1-92", "URS0000D677E2_12908/1-83", "URS0000D6C69F_12908/1-91", "URS0000D6B13B_12908/1-91", "URS0000D6B13B_658087/1-91", "URS0000D66EBC_12908/1-91", "URS0000D65EB2_12908/1-91", "URS0000D6771B_12908/1-91", "URS0000D6C092_12908/1-91", "URS0000D6A08E_12908/1-91" ]
[ "CACCCCUUGGUGCAGAUAAGCCAUCAGGACACGGUUUAGUACACUCCCGCAACCUGCGGGGGGCGAUGGAAAGACCGUGAGGCUAAAAGGAG", "CACCCCUUGGUGAAGAUAUGCUAUAAGGGCACGGUUUAGUACUCUCCGAA--------AGGAGCGCAGGAAACACCGUGAGGCAAAAGGAG-", "CACCCCUUGGUGCAGAUUAGCCAACAGGACACGGUUUAGUACACUCCCGCAACCGGC-GGGAGCGGGGGGAAGAUCGUGAGGCUAAAAGGAG", "CACCCCUUGGUGCAGAUUAGC...
rfam_14_5_mafft
URS0000D6A68F_12908_1-73
GCUUUCAACAUCCCCGUUCCAAGAUGAAGCUGACGAAAGGCAGGUUUGUCGCGGCUUAUCUGGAGCUGAAAGC
(((((((........((((((.....((((((.((..............))))))))...)))))))))))))
[ "URS0000D6A68F_12908/1-73", "URS0000D68B63_12908/1-70" ]
[ "GCUUUCAACAUCCCCGUUCCAAGAUGAAGCUGACGAAAGGCAGGUUUGUCGCGGCUUAUCUGGAGCUGAAAGC", "GCUUUCAACAUCCCCGUUCCAAG-UCGAGCCGACGAA--GCAGUUUUGCCGGCGCGUCUUUGGAGCUGAAAGC" ]
rfam_14_5_mafft
URS0000D6A692_12908_1-48
GACGAAUUCGCUCUAUGCAAAUGGUACCGAUGAAACAUUGUAUAGAGC
..........(((((.(((...................))).))))).
[ "URS0000D6A692_12908/1-48", "URS0000D69D38_12908/1-47" ]
[ "GACGAAUUCGCUCUAUGCAAAUGGUACCGAUGAAACAUUGUAUAGAGC", "GGCGAAUCAGCUCCAUACAAAUGAAACCGAUG-AACAUUGUAUGGAGC" ]
rfam_14_5_mafft
URS0000D6A696_12908_1-180
UGCAGUAGAAAUACUGCACCUAUACUGUGAGAAUCAGUAUCAACUUUGUGGGGCUUAUAUCUUAGGAGCGCAUAUAAAUAAACCUAUAUCUCAAUAGAAGGAAUAAUAGUUGCAAAUAGUAUUCUGGAAAUUCUUUUAUAGUUAUGUUUAUACCUAAGUAUUAGUGCAGAGAAAUCAAAG
(((((((....)))))))...((((((.......))))))...(((((....(((.....((((((.(..................................................................................).))))))....)))..........)))))
[ "URS0000D6A696_12908/1-180", "URS0000D67AE3_12908/1-159", "URS0000D6B95F_12908/1-168", "URS0000D683E5_12908/1-163", "URS0000D66E61_12908/1-163", "URS0000D67798_12908/1-180" ]
[ "UGCAGUAGAAAUACUGCACCUAUACUGUGAGAAUCAGUAUCAACUUUGUGGGGCUUAUAUCUUAGGAGCGCAUAUAAAUAAACCUAUAUCUCAAUAGAAGGAAUAAUAGUUGCAAAUAGUAUUCUGGAAAUUCUUUUAUAGUUAUGUUUAUACCUAAGUAUUAGUGCAGAGAAAUCAAAG", "-----------------AUCUACACUGUGAGAAUCAGUGUCAACUUUGUGGGGCUUAUAUUUAGAGCGCACAUAUGAAAGUGCUU-UUUAUCAAUAGAAGGUGAAAUGAUUGCAAGCAUUA-GCCGGAA...
rfam_14_5_mafft
URS0000D6A69B_12908_1-75
CCUAUGGACUGUUAUAUCAAACCCAAGUAGUACCUUCGAAAGGAGAUAGCAAAAGGGGACAGGUUGAAAUAGGAA
(((((...(((((........(((.....((..((........))...))....))))))))......)))))..
[ "URS0000D6A69B_12908/1-75", "URS0000D69002_12908/1-64", "URS0000D6ACD1_12908/1-66", "URS0000D66AD4_12908/1-71", "URS0000D6A52E_12908/1-62" ]
[ "CCUAUGGACUGUUAUAUCAAACCCAAGUAGUACCUUCGAAAGGAGAUAGCAAAAGGGGACAGGUUGAAAUAGGAA", "CCUAUGGACUGUUA-AACAAACUGUAGUAGCUUUU----------AUAGCGAGGCGGAACAGGAUGAAAUAGGAA", "CCUUUGGACUGUUAUAUCAAACCAUAGUAGU---------UAGCAAUAACGAGGUGGGACAGGUUGAAGAAGGAA", "CCUAUGAACUGUUAUAUCAAACGAAAGUAGUCACCU----UAACAGGGACAAAAUCGGACAGGUGGAAGUUG...
rfam_14_5_mafft
URS0000D6A69F_12908_1-79
GAAAUUUAAGGGCGGAACAGGCAGCCGCCGCCACGUGUUUUACACGGUAGGAGAUGCAGAUUGCCACCUGCUAAAUUUC
((((((((..(((((....[[[[.))))).(..(((((...)))))....)....((((..]]]]..))))))))))))
[ "URS0000D6A69F_12908/1-79", "URS0000D6A31A_12908/1-76", "URS0000D6906E_12908/1-77", "URS0000D6718E_12908/1-72" ]
[ "GAAAUUUAAGGGCGGAACAGGCAGCCGCCGCCACGUGUUUUACACGGUAGGAGAUGCA-GAUUGCCA-CCUGCUAAAUUUC", "UAGCAAUAAGGGCGGAAUAGGUAGCCGCCACCACG---UUUUUACGGUAGGAGAUGAA-GAUUACCA-CCUUCUAUUGCUU", "UAGCAAUAAGGGCGGAAUAGGUAGCCGCCACCACG--UUUUUUACGGUAGGAGAUGAA-GAUUACCA-CCUUCUAUUGCUU", "AAUCUUUGAGGACGGAACAGGCAGCCGUCGCCCAG---------AGUUAGGAGA...
rfam_14_5_mafft
URS0000D6A6B1_12908_1-93
UCUACAGGUAGAGGCUAAGAAGCUCGCCCCGAAAGCAACACGGGCGCCCCUAAGGGACGAGCGGAGCCAUUGGCGCGACCGGCUACCCACGAG
(.(...(((((.(((......(((((.((............[[[[[[[......)).)))))...)))...]]]]]..]]..)))))...).)
[ "URS0000D6A6B1_12908/1-93", "URS0000D68B13_12908/1-91", "URS0000D6D065_12908/1-91", "URS0000D6B783_12908/1-92", "URS0000D6AEA8_12908/1-92" ]
[ "UCUACAGGUAGAGGCUAAGAAGCUCGCCCCGAAAGCAACACGGGCGCCCCUAAGGGACGAGCGGAGCCAUUGGCGCGACCGGCUACCCACGAG", "UCCACAGGUAGAGGCUAAGAAGCUCGCCCCGAAA-AAACACGGGCG-CCCUAGGGGACGAGCGGAGCCAUUGGCGCGACCGGCUAUCCGCGAG", "UCCACAGGUAGAGGCUAAGAAGGUUGCCCCGAAA-AAACACGGGCG-CCCUAGGGGACGAGCGGAGCCAUUGGCGCGACCGGCUAUCCGCGAG", "UCCACAGGUAGAGGCUAA...
rfam_14_5_mafft
URS0000D6A6C9_12908_1-87
UUUAGUCAAUGUCUAUGGGACGAAGUCCCAUAUUAGGAUGACACUGACGAUCUGCCGCCGAACGGAUGUGAGGGGGUAAUACAUUAU
.......(.((((.(((((((...)))))))........)))).).......((((.((..((....))..)).)))).........
[ "URS0000D6A6C9_12908/1-87", "URS0000D68B3C_12908/1-87", "URS0000D6BE12_12908/1-87", "URS0000D68B70_12908/1-87", "URS0000D6ADDE_12908/1-86", "URS0000D69FD1_12908/1-86" ]
[ "UUUAGUCAAUGUCUAUGGGACGAAGUCCCAUAUUAGGAUGACACUGACGAUCUGCCGCCGAACGGAUGUGAGGGGGUAAUACAUUAU", "UUUAGUCAAUGUCUAUGGGACGAAGUCCCAUAUUGGGAUGACACUGACGAUCUGCCGCCGAACGGAUGUGAGGGGGUAAUACAUUAU", "UUUAGUCAGUGUCCAUGGGACGAAGUCCCAUAUUAGGAUGACACUGACGAUCUGCCGCCGAACGGAUGUGAGGGGGCAAUACAUUAU", "UUUAGUCAGUGUCCAUGGGACGAAGUCCCAUAUUAG...
rfam_14_5_mafft
URS0000D6A6CD_12908_20-84
ACCCUAAUGCAGCUUCGGAUAUGCGUCCGGAACGGUGACAAGUCCGUAUAAAUGCAGAGUCAGGG
.((....((((((((((((......))))))[[[..{{{..)).]]].....))))..}}}.)).
[ "URS0000D6A6CD_12908/20-84", "URS0000D6CEF6_12908/18-75", "URS0000D6ADA5_12908/20-78" ]
[ "ACCCUAAUGCAGCUUCGGAUAUGCGUCCGGAACGGUGACAAGUCCGUAUAAAUGCAGAGUCAGGG-", "ACCUUAAUGCAGCUCCGAA--------AGGAACGGUGACAAGCCCGUAUUAAUGCAGAGUCAAGGA", "GCCUUAAUGCAACUCCCUA------UUGGGAACGGUCACAAGUCCGUGUAAAUGCAGAGUGAGGA-" ]
rfam_14_5_mafft
URS0000D6A6DB_12908_1-62
GGCCCCGGCUCGAACCGGCACCGUAUGGUGCGUUUUCCGAAAGGAUAGAGUCGGGGCAUUCU
.((((((((((.......((((....)))).....(((....)))..)))))))))).....
[ "URS0000D6A6DB_12908/1-62", "URS0000D695F9_12908/1-62", "URS0000D6C89C_12908/1-62" ]
[ "GGCCCCGGCUCGAACCGGCACCGUAUGGUGCGUUUUCCGAAAGGAUAGAGUCGGGGCAUUCU", "AACUCCGGCUCGAACUGUCACCGUAUGGUGCGCGUUCCGAAAGGAUAGAGCCGGAGUUUUUU", "GGCUUCGGCCCGAACCGUCACCGUAUGGUGCGCGUUCCGAAAGGAUAGGGCUGAGGCCUUUU" ]
rfam_14_5_mafft
URS0000D6A6DE_12908_1-92
AUAUCGGGAGGCAGCCGGUGGGACGGAUGCCACGAAUGGAUAUCAAGCCCCCUGUCAUAUGGGUGGUUCAGUGCGGCCCCGGCGCUGAAACA
(((((....((((.(((......))).)))).......)))))......................((((((((.........))))).))).
[ "URS0000D6A6DE_12908/1-92", "URS0000D6A805_12908/1-92" ]
[ "AUAUCGGGAGGCAGCCGGUGGGACGGAUGCCACGAAUGGAUAUCAAGCCCCCUGUC-AUAUGGGUGGUUCAGUGCGGCCCCGGCGCUGAAACA", "AUGUCGGGAGGCA-CCGGUGGGACGGUCGCCACGAAUAGACAUGAAACCCCCUGUCAAAAUGGGUGUUGUUCCGCGGCCCGGGCGGAACAGCA" ]
rfam_14_5_mafft
URS0000D6A6DF_12908_1-55
UGGCUGAGAGGGCGACAUUUGGUUCGCUCGUUUGGGGUUACACCCAUCUCGGCCU
.(((((((.((((((........))))))...((((......)))).))))))).
[ "URS0000D6A6DF_12908/1-55", "URS0000D68730_12908/1-53" ]
[ "UGGCUGAGAGGGCGACAUUUGGUUCGCUCGUUUGGGGUUACACCCAUCUCGGCCU", "CGGCUGAGAGGGCGACAUUCAG-UCGCUCGUUUGGGACC-UUCCCAACUCGGCCU" ]
rfam_14_5_mafft
URS0000D6A6E6_12908_1-110
UCACCGCCGGGAAGCGAUGAUCCUCGAGGGGACCAGACGGUCGCCACGAUGAGGCGUUGGCCUCAUCAGCCCGUCGAGGGGAGCUAGUGGCGAGCCCGACCCGGGAGUGC
.(((..(((((.(((......((((((...........[[[[[[[............................))))))...)))...]]]]]..]]..)))))..))).
[ "URS0000D6A6E6_12908/1-110", "URS0000D6ABC3_12908/1-110", "URS0000D6BD4A_12908/1-110", "URS0000D664FC_12908/1-110" ]
[ "UCACCGCCGGGAAGCGAUGAUCCUCGAGGGGACCAGACGGUCGCCACGAUGAGGCGUUGGCCUCAUCAGCCCGUCGAGGGGAGCUAGUGGCGAGCCCGACCCGGGAGUGC", "UCACCGCCGGGAAGCGAUGAUCCUCGAGGGGAGCUGACGGUCGCUCGGACGAGGCCUCGGCCUCACCCGCCCUCCGAGGGGAGCCAGUGGCGAGCCCGACCCGGGAGUGC", "UCACCGCCGGGAAGCGAUGAUCCUCGAGGGGAGCUGACGGUCGCUCGGACGAGGCCUCGGCCUCACCCGCCCAUCGAGGGGAG...
rfam_14_5_mafft
URS0000D6A6E8_12908_1-57
CUUGGAUCCCGGUUUCAUCCCGGGUGGCUAUUCCGGCCGCCAAUCCGCCGGAGCGAC
.....((.((((.......))))))......((((((.........)))))).....
[ "URS0000D6A6E8_12908/1-57", "URS0000D6C820_395963/1-56", "URS0000D68A15_349102/1-56" ]
[ "CUUGGAUCCCGGUUUCAUCCCGGGUGGCUAUUCCGGCCGCCAAUCCGCCGGAGCGAC-", "-UUUGGACCCGGUGUAAUUCCGGGUGGCUCUUCCGGCCGCCAAUCCGCCGGA-UAACG", "-CUUGGACCCGGUGCGAUCCCGGGUGGCUAUUCCGGCCGCUGAUCCGCCGGA-CAACG" ]
rfam_14_5_mafft
URS0000D6A6E9_426117_1-64
CAUCGGCUGCGGGCCCCUCUGGCGAGCCGCGCUUCUGAGCGCCUCGUGAUGUCGGAGCCGAUGC
.....(((.(((.........(((((.(((........))).)))))....))).)))......
[ "URS0000D6A6E9_426117/1-64", "URS0000D6AC39_426355/1-60", "URS0000D6B9E2_460265/1-63" ]
[ "CAUCGGCUGCGGGCCCCUCUGGCGAGCCGCGCUUCUGAGCGCCUCGUGAUGUCGGAGCCGAUGC", "CAUCGGCUGCGGGCCCCUCUGGCGG---GCGCUCCUCAGCGCC-CGUGAUGUCGGAGCCGAUGC", "CAUCGGCUGCGGGCCCCUCUGGCGAGCUGCGCUUCU-CGCGCCUCGUGAUGUCGGAGCCGAUGC" ]
rfam_14_5_mafft
URS0000D6A6EF_12908_1-63
ACUGUAAUGCGGCCAGUGGUCGACCACUGCAGGUUCCAAGCCCUGAAAAACACAGAGGACGGU
((((...((.(((((((((....))))))[[[..{{{..)).]]].....).))..}}}))))
[ "URS0000D6A6EF_12908/1-63", "URS0000D65D6B_12908/1-63" ]
[ "ACUGUAAUGCGGCCAGUGGUCGACCACUGCAGGUUCCAAGCCCUGAAAAACACAGAGGACGGU", "ACUGUAAUGCGGCCGGUGACUAGUCACCGCAGGUUCCAAGUCCUGAAAAACGCAGAGGACAGA" ]
rfam_14_5_mafft
URS0000D6A6F3_1226994_1-96
CGGCCAGGGGGCCGGGAUGUUCGGGAUGCGUCAGGUCCUGAAUGACCCAGGGGUACAGGGGGUACCUCCGCACUAGCGGGCCGGGCCAGGCAAAGC
.((((....(((((((.(.((((((((.......)))))))).).))).(((((((.....)))))))..........)))).)))).........
[ "URS0000D6A6F3_1226994/1-96", "URS0000D66581_12908/1-96", "URS0000D6C9EE_629265/1-91" ]
[ "CGGCCAGGGGGCCGGGAUGUUCGGGAUGCGUCAGGUCCUGAAUGACCCAGGGGUACAGGGGGUACCUCCGCACUAGCGGGCCGGGCCAGGCAAAGC", "GGGCCAAGGGGCCGGGAUGUUCGGGAUGCGUCAGGUCCUGAAUGACCCAGGGGUACAGGGGGUACCUCCGCACUAGCGGGCCGGGCCAGGCAAAGC", "UGACCAUGGGGCCGGGAUGCGUUGAUCGAA--AGGAUCGGCGUGACCUAGGGGUACAGGGAGUACCUCCG---UAACGGGCCGGGUCAGGCAAGCU" ]
rfam_14_5_mafft
URS0000D6A707_266265_1-85
UCCCCGCUUCUCCUCCCUGAGCGGGUGCCUGUCGUUUUUUCGAUUAGGCUGUUUGACCCGCCGUUAAAGCGGCGGGUUUUUUUAU
..((((((...........)))))).((((.(((......)))..))))......((((((((......))))))))........
[ "URS0000D6A707_266265/1-85", "URS0000D69357_482957/1-83", "URS0000D6956B_339670/1-83", "URS0000D6C999_350701/1-83", "URS0000D678B6_269482/1-83", "URS0000D67668_243160/1-83", "URS0000D6A889_271848/1-83" ]
[ "UCCCCGCUUCUCCUCCCUGAGCGGGUGCCUGUCGUUUUUUCGAUUAGGCUGUUUGACCCGCCGUUAAAGCGGCGGGUUUUUUUAU", "UCCCCGCUUCUCCUCCCUGAGCGGGUGCCUGUCG-UUUUUCGAUUAGGCUGUUUGACCCGCCGUUCAA-CGGCGGGUUUUUUUAU", "UCCCCGCUUCUCCUCCCUGAGCGGGUGCCUGUCG-UUAUUCGAUUAGGCUGUUUGACCCGCCGUUCGA-CGGCGGGUUUUUUUAU", "UCCCCGCUUCUCCUCCCUGAGCGGGUGCCUGUCG-UUAUUCG...
rfam_14_5_mafft
URS0000D6A70D_12908_1-101
ACGCUAAGAGGUGGGAAAGGUACCCCACGCGCCCUAGCGGUUAACUAGCGGUUAACUAGCGGUUAAAAAGAGAUGCGGGACACGCCGACCCGCCUUAGCGU
((((((((..(((((...[[[..))))).((((...........................)))......)....(((((....]]]..)))))))))))))
[ "URS0000D6A70D_12908/1-101", "URS0000D6CAEF_12908/1-79", "URS0000D696DF_12908/1-79", "URS0000D6728B_12908/1-78", "URS0000D6A9A0_12908/1-90" ]
[ "ACGCUAAGAGGUGGGAAAGGUACCCCACGCGCCCUAGCGGUUAACUAGCGGUUAACUAGCGGUUAAAAAGAGAUGCGGGACACGCCGACCCGCCUUAGCGU", "ACGCUAAGAGGUGGGAAAGGUACCCCACGCGCC----------------------CUAGCGGUUAAAAAGAGAUGCGGGAUACGCCGACCCGCCUUAGCGU", "ACGCUAAGAGGUGGGAAAGGUACCCCACGCGCC----------------------CUAGCGGUUAAAAAGAGAUGCGGGAUACGCCGCCCCGCCUUAGCGU...
rfam_14_5_mafft
URS0000D6A717_12908_1-123
CACCUAACCCUGUCGGCUCCGGUCGGCAGGUAUGGUGAAAAAGACGAGUGAAGCGUAAAGACCCCAUCGUGGUGUUGCUUCACUCGCCGUACCGGGAAACCGGUAUGUCCGGCGCAAGUCGGA
((((....((((((((......))))))))...)))).......(((((((((((.....((.((.....)).))))))))))))).((((((((....))))))))((((((....))))))
[ "URS0000D6A717_12908/1-123", "URS0000D6B60F_12908/1-122" ]
[ "CACCUAACCCUGUCGGCUCCGGUCGGCAGGUAUGGUGAAAAAGACGAGUGAAGCGUAAAGACCCCAUCGUGGUGUUGCUUCACUCGCCGUACCGGGAAACCGGUAUGUCCGGCGCAAGUCGGA", "CACCUAACCCUGUCGGCUUCGGUCGGCAGGUAUGGUG-AGAAGUCCAGUAAGACAUGAAGAUCCCAUCGUGGGGUUGUCUUACUGGCCAUAUCGGGAAACCGGUAUGUCUGGCGCAAGCCGGA" ]
rfam_14_5_mafft
URS0000D6A730_1332069_1-72
GCAGCAACGCCGUUUGUUGCUGGCUCAUUCGCGGUUGCGGAUGCGUAAACGGAUAGAAGGAUGAUAUCGAUG
.((((((((.....))))))))...((((((......)))))).............................
[ "URS0000D6A730_1332069/1-72", "URS0000D6A730_12908/1-72", "URS0000D69F9A_1144341/1-72", "URS0000D69F9A_1144320/1-72", "URS0000D6838F_12908/1-72", "URS0000D6838F_1358411/1-72", "URS0000D67DFB_592316/1-72", "URS0000D678DA_12908/1-72", "URS0000D6C4FB_12908/1-72", "URS0000D6CD9E_12908/1-72" ]
[ "GCAGCAACGCCGUUUGUUGCUGGCUCAUUCGCGGUUGCGGAUGCGUAAACGGAUAGAAGGAUGAUAUCGAUG", "GCAGCAACGCCGUUUGUUGCUGGCUCAUUCGCGGUUGCGGAUGCGUAAACGGAUAGAAGGAUGAUAUCGAUG", "UCAGCAACGCCGUUCGUUGCUGGCGCAUCCGCGAUAACGGAUGAGUUAACUGAUAGAAGGAUGAUAUCGAUG", "UCAGCAACGCCGUUCGUUGCUGGCGCAUCCGCGAUAACGGAUGAGUUAACUGAUAGAAGGAUGAUAUCGAUG", "GCA...
rfam_14_5_mafft
URS0000D6A735_12908_1-119
GACCUAAACCAAACGCAAGUUUGGCAUGGUCGUCAAAUCAACAAAGAGAAACAGCUCGUCAUGAGUACUUCUCUUUGUUGUCAUUGCUGGAAACGGCAGUGGGUAGCUCUCGGGCUGCC
((((....((((((....))))))...)))).......(((((((((((....((((.....))))...))))))))))).((((((((....))))))))(((((((....)))))))
[ "URS0000D6A735_12908/1-119", "URS0000D6A891_12908/1-119", "URS0000D6A2B1_12908/1-116" ]
[ "GACCUAAACCAAACGCAAGUUUGGCAUGGUCGUCAAAUCAACAAAGAGAAACAGCUCGUCAUGAGUACUUCUCUUUGUUGUCAUUGCUGG-AAACGGCAGUGGGUAGCUCUCGGGCUGCC", "AACCUAAACCAAGCA-AUGUUUGGCAUGGUUUACAAAUCCACAAAGAGAAACAGCUCGUCAUGAGUACUUCUCUUUGUGGCCAAUGCUGGAAAACGGCGUUGGGUGACUCUCGGGCUGCC", "GACCUAAACCAAGCGUUAGCUCGGCAUGGUC-UCAAAUCUACAAGAAGGAACAGCUCGUCAUG...
rfam_14_5_mafft
URS0000D6A738_12908_1-55
CCGGGUAUUACGCAGACACCCGGUAACACAAGGACGAAAUCGUCCCAAGUACUGC
((((((.....[[[[..))))))........(((((....)))))......]]]]
[ "URS0000D6A738_12908/1-55", "URS0000D6731F_12908/1-51", "URS0000D6AA89_12908/1-51" ]
[ "CCGGGUAUUACGCAGACACCCGGUAACACAAGGACGAAAUCGUCCCAAGUACUGC", "CCGGGUCGAACGCAGACACCCGGUAGCCAAGACAUC----CGUCUCAAGUGCUGC", "CCGGGUCAAG-GCAGACACCCGGUGACCAGGACAUC---UCGUCCCAAGCGCUGC" ]
rfam_14_5_mafft
URS0000D6A74C_12908_1-66
CGUUGCAAAGCCUGCUACUUUGCAACGGGUGAGACCGGCACAGCAGAAACCGGUAGGGCGGGAACG
((((((((...........))))))))......(((((...........)))))............
[ "URS0000D6A74C_12908/1-66", "URS0000D6BC46_12908/1-66", "URS0000D686BA_12908/1-66", "URS0000D6C144_12908/1-66", "URS0000D65EB6_12908/1-66", "URS0000D6D2F2_12908/1-64", "URS0000D67F72_12908/1-64", "URS0000D69A95_12908/1-64", "URS0000D6B980_12908/1-64", "URS0000D681FC_12908/1-64" ]
[ "CGUUGCAAAGCCUGCUACUUUGCAACGGGUGAGACCGGCACAGCAGAAACCGGUAGGGCGGGAACG", "CGUUGCAAAGCUUGCUACUUUGCAAUGGGUGAGCCCGGCAUAGCAUAAACCGGGAGGGCGGGAACG", "CGUUGCAAAGCCUGCUACUUUGCAAUGGGUGAUCCCGGCAUAGCAUAAACCGGGAGGGCGGGAACG", "CGUUGCAAAGCCUGCUACUUUGCAAUGGGUGAGCCCGGCAUAGCAUAAACCGGGAGGGCGGGAACG", "CGUUGCAAAGCCUGCUACUUUGCAACG...
rfam_14_5_mafft
URS0000D6A759_12908_1-116
UGAGCGGUAUUGUAAAGCCUGGAUGACUCUGGUCACUCGUAGAGUGUCCUAGCUGUUCCUGAAAUGGAACGGGAACCGAAAGUAGACUGAAAUCCGAGCCCAGGGUGAGCCGCUCA
(((((((..(((.....(((((....(((....(((((...)))))......(((((((......))))))).......................))).))))).))).)))))))
[ "URS0000D6A759_12908/1-116", "URS0000D6CDFB_12908/1-112", "URS0000D6CCDF_12908/1-113", "URS0000D690B1_12908/1-111", "URS0000D671DF_12908/1-107", "URS0000D66282_12908/1-106", "URS0000D6C3F9_12908/1-113", "URS0000D66CC1_12908/1-113", "URS0000D67452_12908/1-107", "URS0000D6A584_12908/1-108" ]
[ "UGAGCGGUAUUGUAAAGCCUGGAUGACUCUGGUCACUCGUAGAGUGUCCUAGCUGUUCCUGAAAUGGAACGGGAACCGAAAG-UAGACUGAAAUCCGAGCCCAGGGUGAGCCGCUCA", "-GAGCGGUAUCGUAAAACCU-GGUGACCCUGGUCGCC-AACAGGCGUCCUAGCUGCUUCUGAAAUGAAGCGGGAACCCAAAG-UAGACUGAAAUCCGGGCUCAGGUGGAGCCGUUC-", "-GAACGGUAUCGUAAUACCU-GAUGACUUUGGUCGCC--CGUGGCGUCCUAGCCGUUUCUGAAAUGAAA...
rfam_14_5_mafft
URS0000D6A75E_1155718_1-84
ACCUGAGCCGGGACGAGAGCAGGGCGUCCCGACUCCGGAAAGACAUACACCGUGCCACGGAAUUUGUGGGCACAUAUGGGCGUU
...((((.(((((((.........))))))).)).))..............(((((((.......)).)))))...........
[ "URS0000D6A75E_1155718/1-84", "URS0000D6914C_1316445/1-84", "URS0000D6B644_1157640/1-84", "URS0000D68650_1160718/1-84" ]
[ "ACCUGAGCCGGGACGAGAGCAGGGCGUCCCGACUCCGGAAAGACAUACACCGUGCCACGGAAUUUGUGGGCACAUAUGGGCGUU", "UCCUGAACCGGGGCGAGAGCAGGGCGCCCCGGUUCCGGCAAGACAUACACCGUGCCACGGAAUUUGUGUGCACAUAUGGGCGUU", "ACCUGUGUCGGGGCGAGAGCAGGGCGCCCCGGUAUCAGAAAGACAUACACCGUGCCACGGAAUGCGUGCGCACAUAUGGGCGUU", "ACCUGAACCGGGGCGAGAGCAGGGCGUCCCGGUGGCAGAAAGACA...
rfam_14_5_mafft