id
stringlengths
12
30
sequence
stringlengths
12
4.38k
secondary_structure
stringlengths
12
4.38k
aligned_ids
listlengths
1
10
aligned_sequences
listlengths
1
10
split
stringclasses
4 values
URS0000D6D0B9_12908_1-144
CUCUAGUACAUAAAAGGGUAUAUAUUUUAAGGAAUAUAUAAAUUAAGUAUUAGUAUUAAAGGAACUUUGUCCAUCCAGUAUGGUAAAUAUAUUUAAAAAUGCACUUACUAGUAAAAUUAUAUAAUUUGAAAGUGAGUGCAUUUU
..(((((((.........(((((((((....)))))))))......))))))).....................(((...)))............(((((((((((((.....((..........))....)))))))))))))
[ "URS0000D6D0B9_12908/1-144", "URS0000D66F47_12908/1-144", "URS0000D65B59_12908/1-144" ]
[ "CUCUAGUACAUAAAAGGGUAUAUAUUUUAAGGAAUAUAUAAAUUAAGUAUUAGUAUUAAAGGAACUUUGUCCAUCCAGUAUGGUAAAUAUAUUUAAAAAUGCACUUACUAGUAAAAUUAUAUAAUUUGAAAGUGAGUGCAUUUU", "CUCUAAUACAUAAAAGAGUAUAUAUUUUAAGGAAUAUAUAAAUUAAGUAUUAGUAUUAAAGGAACUUUGUCCAUCCAGUAUGGUAAAUAUAUUUAAAAAUGCACUUACUAGUAAAAUUAUAUAAUUUGAAAGUGAGUGCAUUUU", "CUCUAAUACAUAAAA...
rfam_14_5_mafft
URS0000D6D0D2_12908_1-75
GCGGAGCACCCGCCAUGCCGGGUGACGCUAUGGCGCCGGACGAACCCCAAACCUGGGCUGGGGAGCAACAUCGGC
(((....(((((......)))))..)))......(((((.....(((((.........))))).......)))))
[ "URS0000D6D0D2_12908/1-75", "URS0000D67CC6_12908/1-75", "URS0000D6B92A_12908/1-73" ]
[ "GCGGAGCACCCGCCAUGCCGGGUGACGCUAUGGCGCCGGACGAACCCCAAACCUGGGCUGGGGAGCAACAUCGGC", "GCAGAGCUGCGGCCAUGCCCGCAGGUGCUAUUGAGCCGGACGAACCCCAAACAUUGGCAGGGGAGCAACAUCGGC", "GCAGAGCCGUGGCCAUGCCCACGGGUGCUAUUGAGCCGGACGAACCCCAAACA--GGCUGGGGAGCAACAUCGGC" ]
rfam_14_5_mafft
URS0000D6D0EA_12908_1-66
AUAAUGAUACUCCCGUAAUUCGCGGCCCGGCCAUAAUGAAGGCGGGGAAACCGAUUUGGUUUGUGA
............((((.....))))(((.(((........))).)))(((.........)))....
[ "URS0000D6D0EA_12908/1-66", "URS0000D6859A_12908/1-64", "URS0000D67A99_12908/1-64", "URS0000D6D28E_12908/1-64", "URS0000D69F68_12908/1-64", "URS0000D6B0FF_12908/1-64", "URS0000D67B4C_12908/1-64", "URS0000D6ABB7_12908/1-64", "URS0000D667FB_12908/1-64", "URS0000D69DBE_12908/1-64" ]
[ "AUAAUGAUACUCCCGUAAUUCGCGGCCCGGCCAUAAUGAAGGCGGGGAAACCGAUUUGGUUUGUGA", "AUAAUGAUACUUCCGUAAUUCGCGGCCCGGUCAUAAUGAAGGCGGGGGGAUGAGACUUCCAUGG--", "AUAAUGAUACUUCCGUAAUUCGCGGCCCGGCCAUAAUGAAGGCGGGGGAAUGAGACUUCCAUGG--", "AUAAUGAUACUUCCGUAAUUCGCGGCCCGGCCAUAAUGAAGGCGGGGGGAUGAGACUUCCAUGG--", "AUAAUGAUACUUCCGUAAUUCGCGGCU...
rfam_14_5_mafft
URS0000D6D0F5_12908_1-65
AGGGUGCCGAUUCAGCUCCUUUAAGUCUGAGUCACUAAAAAUGUAAAAAGGUAAAAAUUAUUAUG
((((....[[[[[[[.))))......]]]]]]]................................
[ "URS0000D6D0F5_12908/1-65", "URS0000D66FFA_12908/1-62" ]
[ "AGGGUGCCGAUUCAGCUCCUUUAAGUCUGAGUCAC-UAAAAAUGUAAAAAGGUAAAAAUUAUUAUG", "AGGGUAACGAUGCGGC-CCCUAAAGUCCGCGUCACUUAAAAAGGUAAAAAGGUAAAAAUUAUG---" ]
rfam_14_5_mafft
URS0000D6D102_12908_1-60
UUACUAAUGCAGCCAAACGUAAACGACAGUUCCAAGCCUGGUGAAAAUGCAGAGGAGUAA
((((...(((((((..........).[[..{{{..)).]].......))))..}}}))))
[ "URS0000D6D102_12908/1-60", "URS0000D6B42D_12908/30-87", "URS0000D6B17A_12908/1-51" ]
[ "UUACUAAUGCAGCCAAACGUAAACGACAGUUCCAAGCCUGGUGAAAAUGCAGAGGAGUAA", "UUACUAAUGCAGCCAAACG-AAACGACAGUUCCAAGCCU-GUGAAAAUGCAGAGGAGUAA", "UUUGUAAUGCAGCCAUA-------GACAGUUACAAGCCUGUU--AAAUGCAGAGUACAAA" ]
rfam_14_5_mafft
URS0000D6D10D_12908_1-95
GUCAGACCUGCGAGGAGAUGGCCAUCCAAGGUAAGUCCUCCCAUAGGGAGGCGCCAUCUCCUGCCGCCAAUCGGCGGUCUUGCAGGUCGGGAGGU
....((((((((((((((((((............(.(((((.....))))))))))))))).(((((......))))).))))))))).......
[ "URS0000D6D10D_12908/1-95", "URS0000D65B16_12908/1-95" ]
[ "GUCAGACCUGCGAGGAGAUGGCCAUCCAAGGUAAGUCCUCCCAUAGGGAGGCGCCAUCUCCUGCCGCCAAUCGGCGGUCUUGCAGGUCGGGAGGU", "GUUAGGCCUGCGAGGAGGUGGUCAUCCAGGGUAAGUGGCACCAAAGGUGCCCGCCAUCUCCUGCCGCCAAUCGGCGGUCUUGCAGGUCGGGAGGU" ]
rfam_14_5_mafft
URS0000D6D113_12908_1-41
UGAGUGUCAGGGAUCAGAAGGGGUGAACAAGACCCUUAGAC
..................((((((.......))))))....
[ "URS0000D6D113_12908/1-41", "URS0000D66A1C_12908/1-40", "URS0000D6B227_12908/1-41" ]
[ "UGAGUGUCAGGGAUCAGAAGGGGUGAACAAGACCCUUAGAC", "UUAGUCUCAGGGAUCAGAAGGGGUGAACAAGACCC-UAGAC", "UGAGUACCAGAGAUCAGAAGGGGAGAACAAGACCCCUAGAC" ]
rfam_14_5_mafft
URS0000D6D11C_12908_1-125
UCUAACUGCGGGUAGCCAAGGCUACGCCGUAUACUCUGCGUGCUCGAAUUAACGUUUAAGCGAUCUUUCAAGAUAGCCGACCGCAGGGGGAAAAGCCGCUGAAUGCGGCUUUUCUUUUAGGCCGC
......((((((((........))).)))))..((((((....((((((....)))....(.(((......))).).)))..))))))(((((((((.........)))))))))..........
[ "URS0000D6D11C_12908/1-125", "URS0000D67470_12908/1-124" ]
[ "UCUAACUGCGGGUAGCCAAGGCUACGCCGUAUACUCUGCGUGCUCGAAUUAACGUUUAAGCGAUCUUUCAAGAUAGCCGACCGCAGGGGGAAAAGCCGCUGAAUGCGGCUUUUCUUUUAGGCCGC", "UUUGCGUGCGGGUAGUUAAGGCUACGCCGUAUACUUCGCGGAAUCGAAUUAACGUUUAAGCGAUCUUUCAAGAUAGCCGACCGCGAGGGAAAGAGCCGC-GAAAGCGGCUUUUUUAUUGUUCAAA" ]
rfam_14_5_mafft
URS0000D6D127_12908_1-79
UUGCCUCUAUCAGCAGUUUUGCUGUUUGGGCUGAGAAUUUUCUUCCGAAGGAGAACGACGUCAGGAAGAAAAAGGGCAU
.(((((...((((.................))))....((((((((.................))))))))..))))).
[ "URS0000D6D127_12908/1-79", "URS0000D69007_12908/1-78" ]
[ "UUGCCUCUAUCAGCAGUUUUGCUGUUUGGGCUGAGAAUUUUCUUCCGAAGGAGAACGACGUCAGGAAGAAAAAGGGCAU", "-AAGCUCUAUCAGUUGUUUUGCUGUUUGAACUGAGAAUUUUCUUCCGAAGGAGAACGAUGUCAGGAAGAAAAAGAGCAA" ]
rfam_14_5_mafft
URS0000D6D12E_12908_1-217
GCCUUAUAAAGAUGUAUGAACGCAAGACAGUUUGGCAUCUCCCUUUAGGGCAUUGUUCAAUUAGAAACUUCAAUGACAAGUCUUAUUGUAAUGCAUUAGUUGAAAUGAGAUGAAUUGAAGUGGAAUAGGUUAACCGUUAGACCUUGAAUUGAAAAAUUCUAAAAUUGAUCUCAAAAGAUAUGAUUAUUACCUUUUAGUAUUUUUGAGUAACGGUGAC
((((((...((((((.(((((........))))))))))).....))))))..................(.........((.((.(....................).))...))....)......(((((.[[[[[[.))))).(((((....)))))..........((((((((...((............))...)))))))).]]]]]]...
[ "URS0000D6D12E_12908/1-217", "URS0000D6993B_12908/1-204", "URS0000D68908_12908/1-202", "URS0000D6911F_12908/1-214", "URS0000D68849_12908/1-214", "URS0000D6C178_12908/1-204", "URS0000D6BB93_12908/1-214", "URS0000D69459_12908/1-214", "URS0000D6BA7C_12908/1-204", "URS0000D65D75_12908/1-214" ]
[ "GCCUUAUAAAGAUGUAUGAACGCAAGACAGUUUGGCAUCUCCCUUUAGGGCAUUGUUCAAUUAGAAACUUCAAUGACAAGUCUUAUUGUAAUGCAUUAGUUGAAAUGAGAUGAAUUGAAGUGGAAUAGGUUAACCGUUAGACCUUGAAUUGAAAAAUUCUAAAAUUGAUCUCAAAAGAUAUGAUUAUUACCUUUUAGUAUUUUUGAGUAACGGUGAC", "ACCUUAUAAAGAUGUAUGAACGCAAGACAGUUUGGCAUCUCCCUUUAAGGCCUUGUUCGAUUAGAAACUUCAAUGACAAGUCUUAUUGUGAG...
rfam_14_5_mafft
URS0000D6D130_12908_1-77
GCUUUCAACAUCCCCGUUCCGGAGUCAAGCGAACUGCAGGCGGAAAGCCGCCAUGGUCGCUGUUCGGAGCUGAAAGC
(((((((........(((((((.....(((((........................)))))..))))))))))))))
[ "URS0000D6D130_12908/1-77", "URS0000D67950_12908/1-53", "URS0000D6749B_12908/1-70", "URS0000D6A9D3_12908/1-47", "URS0000D6A088_12908/1-41", "URS0000D69B57_12908/1-41" ]
[ "GCUUUCAACAUCCCCGUUCCGGAGUCAAGCGAACUGCAGGCGGAAAGCCGCCAUGGU--------CGCUGUUCGGAGCUGAAAGC", "GCUUUCAACAUCCCCGUUCCGG-----------------------GUCCGCCGCGGC---------GAACGCCGGGACUGAAGGC", "GCUUUCAACAUCCCCGUUCCAGAGGCGC---------------AACCCUGGCAUAGCCAGCCAACGACCUGCUGGGACUGAAGGC", "GCUUUCAACAUCCCCGUUCCGGACGCAA--------------...
rfam_14_5_mafft
URS0000D6D13C_12908_1-61
AUAAUGAUACUCCAACGAUGGUGUUGCCCGGACGGAUGUCGGGGAGGUGAGAGUCCUGUGA
............((((......))))(((.(((....))).)))(((.......)))....
[ "URS0000D6D13C_12908/1-61", "URS0000D6BA98_12908/1-57" ]
[ "AUAAUGAUACUCCAACGAUGGUGUUGCCCGGACGGAUGUCGGGGAGGUGAGAGUCCUGUGA", "AUAAUGAUACUCC----UUGAGAUUAGCCAGCACGCAGUGGUGGAGGUGAGAUUCCUGUGA" ]
rfam_14_5_mafft
URS0000D6D13F_12908_1-109
CAGCCAACGGGACGCAACGACCCCUGGAUCAGCAAACGGUCGCCAUCGCAUGACCUCACGGUCAUGACGAGGCCCAGGGCGAGCGAGAGGCGAGACCGACCCGGGGUUG
(((((..((((.(((......((((((.(........[[[[[[[...........................).))))))...)))...]]]]]..]]..)))).)))))
[ "URS0000D6D13F_12908/1-109", "URS0000D6BAC1_12908/1-103" ]
[ "CAGCCAACGGGACGCAACGACCCCUGGAUCAGCAAACGGUCGCCAUCGCAUGACCUCACGGUCAUGACGAGGCCCAGGGCGAGCGAGAGGCGAGACCGACCCGGGGUUG", "CAGCCAACGGAGUGCGGAGAACCCUGAGC---CGCACGGUCGCCA-CGCAUGACCUCCUGGUCAUGAC--GGUGCAGGAGGAGCUAGAGGUGAGACCGACCCGGGGCCG" ]
rfam_14_5_mafft
URS0000D6D147_12908_1-80
GAUUAUUGAAGUAGAGACUGUGUUGUUACACACCCCUUGGGUCAAAAGAAAUGUGGGAAAGGGCACACCUACCAAUAAUU
((((((((..((((.....[[[[[.)))).(((((...)))).....)....(((((....]]]]].)))))))))))))
[ "URS0000D6D147_12908/1-80", "URS0000D69422_12908/1-78", "URS0000D67A22_12908/1-78", "URS0000D6C720_12908/1-80", "URS0000D6751A_12908/1-80", "URS0000D69E46_12908/1-80", "URS0000D6C413_12908/1-80", "URS0000D67D55_12908/1-80", "URS0000D685EE_12908/1-80", "URS0000D6C1D9_1235798/1-80" ]
[ "GAUUAUUGAAGUAGAGACUGUGUUGUUACACACCCCUUGGGUCAAAAGAAAUGUGGGAAAGG-GCACACCUACCAAUAAUU", "UGGUUUAGAAGUAGAGAAUGUGCUGCUACGCACCCUUUGGGUCAAAAGAAAUGUGGAAUUGACACACCACCGUAACCA---", "UGGUUUAGAAGUAGAGAAUGUGCUGCUACGCACCCUUUGGGUCAAAAGAAAUGUGGAAUUGGCGCACCACCGUAACCA---", "GAUUAUUGAAGUAGAGACUGUGUUGUUACACACCCCUUGGGCCAAAAGAAAUGU...
rfam_14_5_mafft
URS0000D6D14D_12908_1-78
GAGCUAUGAGGACGUGAGAGUGAUACCGUCGCCCCGUGACUGGAAGGAGAUGUAGGAUCGUCAGCCCUACCUUAGCUU
((((((.(..((((......[[[[..)))).(((.(...).))...)....(((((...]]]]..)))))).))))))
[ "URS0000D6D14D_12908/1-78", "URS0000D6CC79_12908/1-78", "URS0000D6C3F1_12908/1-78", "URS0000D68505_12908/1-78", "URS0000D67F69_12908/1-78", "URS0000D6582E_12908/1-78" ]
[ "GAGCUAUGAGGACGUGAGAGUGAUACCGUCGCCCCGUGACUGGAAGGAGAUGUAGGAUCGUCAGCCCUACCUUAGCUU", "GAGCUAUGAGGACGUGAGAGUGACAACGUCGCCCCGUGACUGGAAGGAGAUGUAGGAUCGUCAGCCCUACCUUAGCUU", "GAGCUAUGAGGACGUGAGAGUGACACCGUCGCCCCGUGACUGGAAGGAGAUGUAGGAUCGUCAGCCCUACCUUAGCUU", "GAGCUAUGAGGACGUGAGAGUGACACCGUCGCCCCAUAAUCGGAAGGAGAUGUAGGAUCGUCA...
rfam_14_5_mafft
URS0000D6D151_12908_1-117
AGGCUGUGAAGCAGUGGGCUGGUUCGGUGACAGUCGAUUGUGAAGCCAGACCGUGGGUUGUGCGGGAACCACAAGCCAAAUAAGCGGCGGAAAUGCUGCUGAAAGAAAACGCAAAAA
.(((......(((((.(((((..[.[[...))))).)))))...)))..............(((...........]].]...(((((........))))).........))).....
[ "URS0000D6D151_12908/1-117", "URS0000D6A1DB_12908/1-117", "URS0000D6BB79_12908/1-116", "URS0000D6D20C_12908/1-116", "URS0000D67A87_12908/1-116", "URS0000D6AFEB_12908/1-116", "URS0000D668E4_12908/1-116", "URS0000D6BBA9_12908/1-116", "URS0000D6B145_12908/1-117" ]
[ "AGGCUGUGAAGCAGUGGGCUGGUUCGGUGACAGUCGAUUGUGAAGCCAGACCGUGGGUUGUGCGGGAACCACAAGCCAAAUAAGCGGCGGAAAUGCUGCUGAAAGAAAACGCAAAAA", "AGGCUGUGAAGCAGUGGGUUGGGUCGGUAUUAGUCGAUUGCAGAGCCAGACCGUGGGUUGUGCGGGUACAAUAAGCCGAAUAAGCGGCGGAAAUGCUGCUGAAAGAAAACGCAAAAA", "-AGGCGUGAAGCAGUGGGCUGGGUCGGUAUCAGUCGAUUACAGAGCCGGACCGUGGGUUGUGCGGAUAC...
rfam_14_5_mafft
URS0000D6D153_883100_1-74
GCAUUGCACUCGCCAUGCCGAGUGAUGCGAUUGCGCCGGACGAACACCCCACGGGCGGGAUGAGCAACAUCGGC
(((....(((((......)))))..)))......(((((.....((.(((......))).)).......)))))
[ "URS0000D6D153_883100/1-74", "URS0000D6D153_12908/1-74" ]
[ "GCAUUGCACUCGCCAUGCCGAGUGAUGCGAUUGCGCCGGACGAACACCCCACGGGCGGGAUGAGCAACAUCGGC", "GCAUUGCACUCGCCAUGCCGAGUGAUGCGAUUGCGCCGGACGAACACCCCACGGGCGGGAUGAGCAACAUCGGC" ]
rfam_14_5_mafft
URS0000D6D15E_12908_1-66
CGCAGAGUGACGGACAGGGCUAACGCCCUUUCCGGUAAUGCGGCUUAGAGCGGUCACAAGCCCCGC
((((..[[[.((((.(((........))).))))....))))((.....{{{..]]]..))..}}}
[ "URS0000D6D15E_12908/1-66", "URS0000D694A0_12908/1-58", "URS0000C2F82F_203119/1-58", "URS0000D6AE3C_12908/1-63", "URS0000D680E2_12908/1-56", "URS0000D66A1E_12908/1-63", "URS0000D67141_12908/1-55" ]
[ "CGCAGAGUGACGGACAGGGCUAACGCCCUUUCCGGUAAUGCGGCUUAGAGCGGU-CACAAGCCCCGC", "CGCAGAGUGACGCGCUGAAACUA------GCGCGGUAAUGCGGC--AGAACGGUUCACAAGCCCGU-", "UCCAGAGUGACGGAACGACUCUUC-----CUCCGGUAAUGCGGU--GGCCCGGU-CACAAGUCCGG-", "CGCAGAGUGACGGACAGGGCUAACGCCC-UCCCGGUAAUGCGGCU-AGAGCGGU-CACAAGCCCGC-", "CGCAGAGUGACGGGCGCAA----...
rfam_14_5_mafft
URS0000D6D161_12908_1-134
GCUCUGUGUACGCAAGGGCUACACAGGCCGAUCACUGAAAAACAGGUGGUCAGCUCAGUCAUCCUGCUUCGGCAAACACACUACUAGGUUUGGCAUAACGUAGAGUAUGCAGAAAGCUGAAAUACGAAGCCAGC
((.(((((((.((....))))))))))).((((((..........)))))).............(((....)))...............(((((....((((......(.......).....))))..))))).
[ "URS0000D6D161_12908/1-134", "URS0000D6C19B_12908/1-134", "URS0000D67D75_12908/1-134" ]
[ "GCUCUGUGUACGCAAGGGCUACACAGGCCGAUCACUGAAAAACAGGUGGUCAGCUCAGUCAUCCUGCUUCGGCAAACACACUACUAGGUUUGGCAUAACGUAGAGUAUGCAGAAAGCUGAAAUACGAAGCCAGC", "GCUCUGUGUACGCAAGGGCUACACAGGCCGAUCACUGAAAAACAGGUGGUCAGCUCAGUCAUCCUGCUUCGGCAAACACACUACUAGGUUUGGCAUAACGUAGAGUAUGCAGAAAGCUGAAAUACGGAGCCAGC", "GCUCUGUGUACGCAAGGGCUGCACAGGCCGAUCAC...
rfam_14_5_mafft
URS0000D6D169_12908_1-116
GACGAGUCGAGGAAAACGCGAGAUGCGUUCUUUGACAGAGAUCAUCUGGACUCUAGAAGUCAAAGCACGGGAAGUGCUGAUGAUGGGCUACUUUGGCUGUGAAACAAAGACCCUGA
.....((((((((..((((.....))))))))))))....((((((..((((.....))))..(((((.....)))))))))))(((...(((((.........))))).)))...
[ "URS0000D6D169_12908/1-116", "URS0000D6D185_147802/1-115", "URS0000D66022_12908/1-115", "URS0000D66022_525328/1-115", "URS0000D66022_879298/1-115", "URS0000D66022_879296/1-115", "URS0000D66022_879302/1-115", "URS0000D66022_879304/1-115", "URS0000D66022_928328/1-115", "URS0000D66022_879300/1-115" ]
[ "GACGAGUCGAGGAAAACGCGAGAUGCGUUCUUUGACAGAGAUCAUCUGGACUCUAGAAGUCAAAGCACGGGAAGUGCUGAUGAUGGGCUACUUUGGCUGUGAAACAAAGACCCUGA", "GACGGGUCGAGGAAAGUGCGAAA-GCACUCUUUGACAGGAAGGUAUCAGACUUUAAAAAGUCAGGCACGGGAAGUGCUGAUAGUGAGCAACUUUGGAUGUGAACCAAAGACUCUGA", "GACGGGUCGAGGAAAGUGCGAAA-GCACUCUUUGACAGGAAGCUAUCAGACUUUAAAUAGUCAGGCACGGG...
rfam_14_5_mafft
URS0000D6D16B_748671_1-59
CCAUCAUAGUUGGUCAAUGCGAUUACUCCCUAGUUGGAAUAUCAGAAUACCGGCGUUUU
........((((((......(((...(((......)))..))).....)))))).....
[ "URS0000D6D16B_748671/1-59", "URS0000D6C896_12908/1-59" ]
[ "CCAUCAUAGUUGGUCAAUGCGAUUACUCCCUAGUUGGAAUAUCAGAAUACCGGCGUUUU", "CCAUCAUAGUUGGUCAAUGUGAUUAAUCCCUAGUUGGAAUAUCAGAAUACCGACGUUUU" ]
rfam_14_5_mafft
URS0000D6D174_12908_1-93
CUGAGAAGGCCCCUGCGUGAUGCGAAGCAGCACGAUAUAAUAGGGGCCGACGACGUGCCCUCGACGCCGAAGGCGUAGGGGGCGAUACCAUAA
.......((((((...(((.(((...))).))).........)))))).......((((.((..((.......))..)).)))).........
[ "URS0000D6D174_12908/1-93", "URS0000D6C1BD_12908/1-93", "URS0000D6C3EA_12908/1-92", "URS0000D6BF39_12908/1-93", "URS0000D6A66E_12908/1-91" ]
[ "CUGAGAAGGCCCCUGCGUGAUGCGAAGCAGCACGAUAUAAUAGGGGCCGACGACGUGCCCUCGACGCCGAAGGCGUAGGGGGCGAUACCAUAA", "CAGAGGAGGCCCCUACGUGAUGCGAAGCAGCACGUUAUAAUAGGGGCCGACGACAUGCCCUCGAAGCCGCAGGCUGAGGGGGCGACACCAUAG", "GAGAGGAGGCUCCCACGUGAUGCGAAGCAGCACGUUAUAAUUGGGGCCGACGACAUGCCGCCGACGCCAGAGGCGGA-GGGGCGAUACCUUGA", "UGAAGGAGGCUCCCACGU...
rfam_14_5_mafft
URS0000D6D188_12908_1-207
UGCAUCCGGGUCUGUGGUUGCAAGCCGAUGCCAGACGCGGGCAAAGCGGUCCACGUAAGCCGGACAAAGUUCCGGUGAGCAUGGCGCGUUCUAGGUGUAAGACCGACCGCCGCCCAGGCGGCGAGAGAAGGCGAGUAGGGCGCUGAAGCGAUGAGCAGACCUUCCCGUCGGCGAGUGUGGGGGCAAAGACCAGGUCAGCCGGAUGCA
(((((((((..((((((((.....(((.((((.[[[[[[))))...)))((((((......(........).............]]]]]].............((((((((((....))))))...((((....((....(((....)))....))....))))..)))).....))))))......)))))...))))))))))))
[ "URS0000D6D188_12908/1-207", "URS0000D69E76_12908/1-206", "URS0000D66CAD_12908/1-207", "URS0000D67980_12908/1-207", "URS0000D688CB_12908/1-205", "URS0000D67A16_12908/1-207", "URS0000D68FB6_12908/1-204" ]
[ "-UGCAUCCGGGUCUGUGGUUGCAAGCCGAUGCCAGACGCGGGCAAAGCGGUCCACGUAAGCCGGACAAAGUUCCGGUGAGCAUGGCGCGUUCUAGGUGUAAGACCGACCGCCGCCCAGGCGGCGAGAGAAGGCGAGUAGGGCGCU-GAAGCGAUGAGCAGACCUUCCCGUCGGCGAGUGUGGGGGCAAAGACCAGGUCAGCCGGAUGCA", "UCGUAUUCGGGUCUGUGGUUGCAAACCGAAGCCAGACGCGGGCAAAACGGUCCACGUAAGUUGAGCUAUGUCUCAAUGAGCAUGGCGCGUUCUAGAAGUA...
rfam_14_5_mafft
URS0000D6D18F_12908_1-128
AAAGAGUAUAUUGCACUAUUAUAUCAACACAGUGAUAUAUGAAAACUCGUAUAUGAUGUAUAUCUCUCUAAUUGAGGCGUUAUCCGGUCUGCCAGGAUAUGAAGGCGCAGAGGUGUGCAAAACUCUUU
(((((((...((((((......((((......))))((((((....)))))).............(((.....)))....((((.((....)).).)))...............)))))).)))))))
[ "URS0000D6D18F_12908/1-128", "URS0000D65AEC_12908/1-128", "URS0000D65770_12908/1-128", "URS0000D67C39_12908/1-128", "URS0000D6662F_12908/1-128", "URS0000D6747B_12908/1-128", "URS0000D68529_12908/1-128" ]
[ "AAAGAGUAUAUUGCACUAUUAUAUCAACACAGUGAUAUAUGAAAACUCGUAUAUGAUGUAUAUCUCUCUAAUUGAGGCGUUAUCCGGUCUGCCAGGAUAUGAAGGCGCAGAGGUGUGCAAAACUCUUU", "AAAGAGUAUAUUGCACUAUUAUAUCAACCCAAUGAUAUAUGAAAACUCGUGUAUGAUGUAUAUCUCUCUAAUUGAGGCGUUAUCCGGUCUGCCAGGAUAUGAAGGCGCAGAGGCGUGCAAAACUCUUU", "AAAGAGUAUAUUGCACUAUUAUAUCAACCCAAUGAUAUAUGAAAACU...
rfam_14_5_mafft
URS0000D6D1D0_12908_1-77
AACCGCAUCGAGCGUGGUAGCAGUAAUGCCCACAAAGGUUUCGCGUUUGACACCUUGACAGCUCGUAAUGCGGUUUC
((((((((.((((((((..(((....))))))).(.(((............))).)....))))...))))))))..
[ "URS0000D6D1D0_12908/1-77", "URS0000D6ACA6_12908/1-76" ]
[ "AACCGCAUCGAGCGUGGUAGCAGUAAUGCCCACAAAGGUUUCGCGUUUGACACCUUGACAGCUCGUAAUGCGGUUUC", "UACCGUGCCGAGUGUGGUAGCAGUAAUGCCCACAAAAGUUU-GCUUUUGAACUUUGAACAGCUCGUAGCACGGUUUU" ]
rfam_14_5_mafft
URS0000D6D1D8_12908_1-206
AUCGGAGUUCCGUCGAGGUCAAGCGCCUCCGGAAGAGUAUCUUGUGAAUUCAGUGACCCACCGGCGACGGAAAACAGGCGCGGCGAGCCGACGACGGCUGCGCGGCGUUGUCGUCCGGUAUUGAAAAUCCAAUCCGACGCAGGGUUCGCCCCCUUCCGCUGGGAAAAGACAUCCCCUGCGCCGUUUAGCAAGCGGUCACUUUUGCC
((.....(((((...((.........)).)))))....))...........(((((((.((((((((...........(((.((((((........))).))).)))...))).)))))...............((.(((((((...(.(.................).)...))))))).))..........)))))))......
[ "URS0000D6D1D8_12908/1-206", "URS0000D69F24_1033732/1-206" ]
[ "AUCGGAGUUCCGUCGAGGUCAAGCGCCUCCGGAAGAGUAUCUUGUGAAUUCAGUGACCCACCGGCGACGGAAAACAGGCGCGGCGAGCCGACGACGGCUGCGCGGCGUUGUCGUCCGGUAUUGAAAAUCCAAUCCGACGCAGGGUUCGCCCCCUUCCGCUGGGAAAAGACAUCCCCUGCGCCGUUUAGCAAGCGGUCACUUUUGCC", "AUCGGAGUUCCGUCGAGGUCAAGCGCCUCCGGAAGAGUAUCUUGUGAAUUCAGUGACCCACCGGCGACGGAAAACAGGCGCGGCGAGCCGACGACGGCUGCGC...
rfam_14_5_mafft
URS0000D6D1EF_12908_1-54
UACAAAACAGCCGUUCGGGCUGUUCGGCAAAAGUAAGUCCUCCGUUUCAGGAGA
.......(((((.....))))).................((((......)))).
[ "URS0000D6D1EF_12908/1-54", "URS0000D6C42E_12908/1-47", "URS0000D6B77A_12908/1-47", "URS0000D67FE4_12908/1-53", "URS0000D67739_12908/1-54" ]
[ "UACAAAACAGCCGUUCGGGCUGUUCGGCAAAAGUAAGUCCUCCGUUUCAGGAGA", "UCCAAAACAGUCGUUC-GACUG------AAAAGUAAGUCCCCCGGUUCAGGGGA", "UACAAAACAGUCGUUC-GACUG------AAAAGUAAGUCCCCCGGUUCAGGGGA", "UACAAAACAGCCGUUC-GGCUGGUUGGCAAAAGUAAGUCCUCCGUUUCAGGAGA", "UACAAAACAGCCGUUCGGGCUGGUUGGCAAAAGUAAGUCCUCCGUUUCAGGAGA" ]
rfam_14_5_mafft
URS0000D6D205_12908_1-52
AGAUGUCUUCGUAGAGCCACGAAGACAUUAAAAUAAAGAAAGCUCGCUGAGA
.....((((((..[[[[..))))))................]]]].......
[ "URS0000D6D205_12908/1-52", "URS0000D6A783_12908/1-51", "URS0000D69071_12908/1-52" ]
[ "AGAUGUCUUCGUAGAGCCACGAAGACAUUAAAAUAAAGAAAGCUCGCUGAGA", "UGAUUUCGUUGUAGAG-CGCAACGAACAAAAAAUAAAGAAAGCUCACGGAGA", "AGACCUGGUCGUAGAGCCACGACCAACUAAAAAUAAAGAAAGCUCACUGAGA" ]
rfam_14_5_mafft
URS0000D6D211_12908_1-48
CGCCAGCGAUAAAUUGGUAUCGCUGAAGGGCCAAUCGGGGCCAGAGAU
...((((((((......))))))))...((((......))))......
[ "URS0000D6D211_12908/1-48", "URS0000D6AEFD_12908/1-47", "URS0000D6BB3A_12908/1-47" ]
[ "CGCCAGCGAUAAAUUGGUAUCGCUGAAGGGCCAAUCGGGGCCAGAGAU", "CGCCAG-GGCCAAUUGGGGUUCCUGAAGGGCCAAUCGGGGUCAGGAUC", "CGCCAG-GGCCAAUUGGGGUUCCUGAAGGGCCAAUCGGGGUCAGGAUG" ]
rfam_14_5_mafft
URS0000D6D217_305700_1-192
UGUCGCCCGUUUCGUGAUGGUCACGGCCACCAUGACUGUGCGAAAUCUUGAUCUGGUCGCGCCGCUGGCCCACGAGGCCACCGCCAUGCGCACUUCGGAGACCGCCGGCAGCAGCCGGGUCCGGUCCGGCGCAGUUUCCCCGCUGAUCGGCCAAGACCUUCGGCGAGGCGACGUAGAUAGCGCGAUCGGUCG
...(((.....(((((.((((....)))).)))))....)))..............((((((((.(((((.....))))).))...(((((....((((..((.(((((....)))))....))))))))))).((.((.((((((..((......)).)))))).)).))........)))))).......
[ "URS0000D6D217_305700/1-192", "URS0000D6B113_1264675/1-190" ]
[ "UGUCGCCCGUUUCGUGAUGGUCACGGCCACCAUGACUGUGCGAAAUCUUGAUCUGGUCGCGCCGCUGGCCCACGAGGCCACCGCCAUGCGCACUUCGGAGACCGCCGGCAGCAGCCGGGUCCGGUCCGGCGCAGUUUCCCCGCUGAUCGGCCAAGACCUUCGGCGAGGCGACGUAGAUAGCGCGAUCGGUCG", "CGUCGCCCGUUGCAUCACCGUCAAGGCGGUAAUGCCUGUGCGAA--UUUAAUCUGGUCGUGCCGCUGGCCCACAAGGUCACCGCAAUGCGCACCACGGAUACCGCCGGAUGUUUCCG...
rfam_14_5_mafft
URS0000D6D218_12908_1-96
UUAAACCCUACCCGAUUGCUAUGGCCAUCCAAGGUAAGAGUGUCCCGAAGGGGCACCGCCAUAGCGUCCCGAAAGGGAUAGGGUAGGGUAGGAGGA
....(((((((((....((((((((............(.((.(((.....))).)))))))))))(((((....))))).))))))))).......
[ "URS0000D6D218_12908/1-96", "URS0000D6C363_12908/1-94", "URS0000D6B1B2_12908/1-94", "URS0000D66D34_12908/1-94", "URS0000D69B23_12908/1-95" ]
[ "UUAAACCCUACCCGAUUGCUAUGGCCAUCCAAGGUAAGAGUGUCCCGAAGGGGCACCGCCAUAGCGUCCCGAAAGGGAUAGGGUAGGGUAGGAGGA", "UUAAACCCUACCCGCAAGCUAUGGCCAUCCAGGGUAAGAGUG-GCCAGAGGCCA-CCGCCAUAGCGUCCCGCAAGGGAAAGGGUAGGGUAGGAGGA", "UUAAACCCUACCCGCAAGCUAUGGCCAUCCAGGGUAAGAGGU-GCCAAAGGCAC-CCGCCAUAGCGUCCCGCAAGGGAAAGGGUAGGGCAGGAGGA", "UUAAACCCU...
rfam_14_5_mafft
URS0000D6D21B_12908_1-78
ACAGAAAUGCAGCCGUCUGGGGGGCAAGCCAGCCCAACUAGACGACGGUCACAAGCCCGUGAAAAUGCAGAGUGUUGC
.(((...((((((((((((...................))))))[[[..{{{..)).]]].....))))..}}}))).
[ "URS0000D6D21B_12908/1-78", "URS0000D6AF4F_12908/27-78", "URS0000D6C852_12908/14-65", "URS0000D6BA26_12908/1-52" ]
[ "ACAGAAAUGCAGCCGUCUGGGGGGCAAGCCAGCCCAACUAGACGACGGUCACAAGCCCGUGAAAAUGCAGAGUGUUGC", "UCUGUAAUGCAGCC--------------------------GAGGACGGUCACAAGCCCGUGUAAAUGCAGAGUGCAGA", "GCGCUAAUGCAGCC--------------------------GAGGACGGUCACAAGCCCGUGAAAAUGCAGAGUGGCGU", "UCUGUAAUGCAGCC--------------------------UAAGACGGUUACAAGCCCGUGGA...
rfam_14_5_mafft
URS0000D6D21C_12908_1-181
UAAUAUGAUUAAGAAAUCAAAAAAGAUUUCUGAGACAAACACGCUUCACAAUGUGCGGCAAAGAAACAUUGUUUAUGCAAAGGCACUUCGCAAUGUGUGCUCAAACAUUGCUUAUUCAAACACGCUUCACAAUGUGCGACAAAGAAACAUUGUUAUAAGAGCUAAUGUUUUAACAUUGGCU
.....(.....[[[[[[[..)...]]]]]]]..........(((...[[[[[[[)))........]]]]]]]...........(((...[[[[[[[))).....]]]]]]]......................................................................
[ "URS0000D6D21C_12908/1-181", "URS0000D6C3EC_12908/1-180", "URS0000D6A18A_12908/1-117" ]
[ "UAAUAUGAUUAAGAAAUCAAAAAAGAUUUCUGAGACAAACACGCUUCACAAUGUGCGGCAAAGAAACAUUGUUUAUGCAAAGGCACUUCGCAAUGUGUGCUCAAACAUUGCUUAUUCAAACACGCUUCACAAUGUGCGACAAAGAAACAUUGUUAUAAGAGCUAAUGUUUUAACAUUGGCU-", "UAAUAUGACUAAGAAAUC-AAAAAGAUUUCUGUGACAAACACGCUUCACAAUGUGCGACAAAGAAACAUUGUUUAUGCAAAGGCACUUCGCAAUGUGUGCUCAAACAUUGCUUAUUCAAACACGCUU...
rfam_14_5_mafft
URS0000D6D21F_12908_1-55
GGGUGCGAUUGAACUGACUCAGUCGCAGGUAUUGCGAAUAGUCGGGCCGCUAUUC
....((((((((......)))))))).........(((((((......)))))))
[ "URS0000D6D21F_12908/1-55", "URS0000D6B39B_12908/1-54", "URS0000D685FC_12908/1-55" ]
[ "GGGUGCGAUUGAACUGACUCAGUCGCAGGUAUUGCGAAUAGUCGGGCCGCUAUUC", "GGGUGCGACUGAACUGACUCAGUCGCAGGUUUCUUGGAUGGUC-GGCCGCCAUCC", "GGGUGCGACUAAAAUGACUUAGUCGCAGGUUUUGCGAGUGGUCGGGCCGCCAUUC" ]
rfam_14_5_mafft
URS0000D6D22A_12908_1-266
UUCUUAGCUUAGUAGUAACCGUGCAUAAAGGUGAAAAUACCCAGAGAGUUAAGAAGGAAUGUGCAACCAUCCGUCUGUAAAGGCGGUAAAUUGAUGGCUGGCCUGAUAUAAGGCUGGCGCACCGUAUCGGUGUCCCUGAGCAGACCGGCGGGACGAUUCUUUCAUGGCGGGGCCUGUGCAUACCCCGUUUCAUCACCGGUUUGCAAACCUGAUUAGAGCGCACACUAUAAGUAGCAGGAAGGGCGUAGAUUCUUUGAACAAUCGGC
..(((.(..........(((.........))).........).)))..................................................((((..............))))...........(((.((((..(((((.(((.((...((.....))..(((((((..........)))))))...)).))).)))))...((((.......................)))).)))))))....................
[ "URS0000D6D22A_12908/1-266", "URS0000D68EFA_12908/1-266" ]
[ "UUCUUAGCUUAGUAGUAACCGUGCAUAAAGGUGAAAAUACCCAGAGAGUUAAGAAGGAAUGUGCAACCAUCCGUCUGUAAAGGCGGUAAAUUGAUGGCUGGCCUGAUAUAAGGCUGGCGCACCGUAUCGGUGUCCCUGAGCAGACCGGCGGGACGAUUCUUUCAUGGCGGGGCCUGUGCAUACCCCGUUUCAUCACCGGUUUGCAAACCUGAUUAGAGCGCACACUAUAAGUAGCAGGAAGGGCGUAGAUUCUUUGAACAAUCGGC", "UUCAAUGUUUGAAAGUAACCAUGUAUAAGGGUGAAAAUAUCCA...
rfam_14_5_mafft
URS0000D6D235_12908_1-59
CGUUCAUAGAUUGUCCAUGUCGUUACCCACGAAAGUGGAUACGGGAAUACAAUUGUUGA
........((((((.....((((...(((......)))..))))....)))))).....
[ "URS0000D6D235_12908/1-59", "URS0000D6D294_12908/1-58", "URS0000D67EB6_12908/1-59", "URS0000D67B07_12908/1-57", "URS0000D68072_12908/1-59", "URS0000D69213_12908/1-59", "URS0000D6A934_12908/1-59", "URS0000D6A283_12908/1-59", "URS0000D6606D_12908/1-59", "URS0000D66AFA_12908/1-59" ]
[ "CGUUCAUAGAUUGUCCAUGUCGUUACCCACGAAAGUGGAUACGGGAAUACAAUUGUUGA", "UGUUCAGAGAUUGUCAAUGUCGUUACCUACACA-GUAGAUACGGGAAUACAAUUGUUAA", "CGUUCAGAGAUUGUCCAUGUCGUUACCUACGAACGUAGAUACGGGAAUACAAUUGUUGA", "--UUCAGAGAUUGCCUAUGUCGUUACCCAUGUAAGUGGAUACGGGAAUGCAAUUGUUAA", "CGUUCAGAGAUUGUCUCUGUCGUUACCCACAUCAGUGGAUACGGGAAAGCAAUCG...
rfam_14_5_mafft
URS0000D6D239_12908_1-93
UGACCAGGGGGCUGGGCAGCUCUGAUCGAUGCAAUAUCGGAGCCGCCUAGGGGUACAAGGAGUACCUCCGCACAGGGCCGGGUCAGGAAAGCA
(((((....((((((((..(((((((.........)))))))..)))).(((((((.....))))))).......)))).)))))........
[ "URS0000D6D239_12908/1-93", "URS0000D6670A_12908/1-91", "URS0000D6670A_450396/1-91", "URS0000D6C2E5_12908/1-92", "URS0000D6C9F9_384676/1-93" ]
[ "UGACCAGGGGGCUGGGCAGCUCUGAUCGAUGCAAUAUCGGAGCCGCCUAGGGGUACAAGGAGUACCUCCGCACAGGGCCGGGUCAGGAAAGCA", "UGACCAGGGGGCCGGGUUGUGUUGAUUGAAAU--GAUCGGCGCGACCUAGGGGUACAGGGAGUACCUCCGUUGAGGGCCGGGUCAGGCAAGCU", "UGACCAGGGGGCCGGGUUGUGUUGAUUGAAAU--GAUCGGCGCGACCUAGGGGUACAGGGAGUACCUCCGUUGAGGGCCGGGUCAGGCAAGCU", "UGACCAGGGGGCCGGGAC...
rfam_14_5_mafft
URS0000D6D25E_12908_1-74
GCUUGCAUUGGGCAAGUUUAUGCAGUUACCCACUGCGUAUUGACCUAGAACGUCACUUAAGGAGAAAACAAAUG
((((((.....)))))).(((((((.......))))))).((((.......))))...................
[ "URS0000D6D25E_12908/1-74", "URS0000D6BD1D_12908/1-74" ]
[ "GCUUGCAUUGGGCAAGUUUAUGCAGUUACCCACUGCGUAUUGACCUAGAACGUCACUUAAGGAGAAAACAAAUG", "GCUUGCAUUGGGCAAGUUUAUGCAGUUCCCCACUGCGUAUUGACCUAGAACGUCACUUAAGGAGAAAACAAAUG" ]
rfam_14_5_mafft
URS0000D6D268_12908_1-71
CCUCUAAUGCAGCCUGCCGCUGGCGAGUGACCACGGCAGCCCGUCCCAAGCCGGAAAAUGCAGAGGGGAGA
.(((...((((((((((((..............)))))).[[..{{{..)).]]....))))..}}}))).
[ "URS0000D6D268_12908/1-71", "URS0000D6617A_12908/16-74", "URS0000D66F3B_12908/12-72", "URS0000D68DC5_12908/13-71", "URS0000D68585_214688/28-97", "URS0000D67083_12908/15-78", "URS0000D6D3CD_12908/1-59", "URS0000D6C5F3_12908/18-76" ]
[ "CCUCUAAUGCAGCCUGCCGCUGGCGAGUGACCACGGCA-----------GCCCGUCCCAAGCC----GGAAAAUGCAGAGGGGAGA", "CCUGUAAUGCAGCC---------------GCCGA--UC--------GGCGCAGGUCACAAGCCC--UGAUAAAUGCAGAGGGCAGA", "CUCCUAAUGCAGCC---------------GCCGGAUCC--------GGCGCAGGUCACAAGCCC--UGGCAAAUGCAGAGUGGGAG", "CUCUUAAUGCAGCC---------------GCCGG-UAA-...
rfam_14_5_mafft
URS0000D6D284_1071395_1-78
ACUUUGGAGUGUUACACCAAAUGCAAGUAGCGAUCUGUUUAAUAGAUAGACGUGAAAGCAGACACGAUGAAGAAGUAA
(((((...(((((........(((.....(((.((.........))....)))....))))))))......)))))..
[ "URS0000D6D284_1071395/1-78", "URS0000D6A3AC_12908/1-70", "URS0000D6D284_1236905/1-78", "URS0000D6D284_665952/1-78" ]
[ "ACUUUGGAGUGUUACACCAAAUGCAAGUAGCGAUCUGUUUAAUAGAUAGACGUGAAAGCAGACACGAUGAAGAAGUAA", "CCUUUGGAGUGUUACAUCAAAUGUUAUUAGUAUUAGCAAUAAUA--------UGAGGGCAGACACGAUGAAUAAGGAA", "ACUUUGGAGUGUUACACCAAAUGCAAGUAGCGAUCUGUUUAAUAGAUAGACGUGAAAGCAGACACGAUGAAGAAGUAA", "ACUUUGGAGUGUUACACCAAAUGCAAGUAGCGAUCUGUUUAAUAGAUAGACGUGAAAGCAGAC...
rfam_14_5_mafft
URS0000D6D286_12908_1-74
UGCUAUAUGUGUAGGCAUAUAGGAAAAGAAUUGUUGUCAACUGUUCGACUAUGAGAUUUGAAAGAAUUUCAUCG
..((((((((....))))))))..............................((.((((....)))))).....
[ "URS0000D6D286_12908/1-74", "URS0000D6AECC_12908/1-74" ]
[ "UGCUAUAUGUGUAGGCAUAUAGGAAAAGAAUUGUUGUCAACUGUUCGACUAUGAGAUUUGAAAGAAUUUCAUCG", "UGCUAUAUGUGUAGGCAUAUAGGAAAAGAAUUGUUGUCAACUGUUCGACUAUGGGAUUUGAAAGAAUUUCAUCG" ]
rfam_14_5_mafft
URS0000D6D290_12908_1-120
UUGAAUCGCAGAUAGAAAUAGGCUGUAUAAUCACAUAACCAAAUUAACGUUUAAGUGUCAUGUGCUGGCACUGGUCGUGAUGGGUGGGUUGUCCGAGAAUGGAUAGCCCAUUUUUAUUUC
.......((((.((....))..))))...(((((....((((((....)))....(((((.....))))).)))..)))))...(((((((((........)))))))))..........
[ "URS0000D6D290_12908/1-120", "URS0000D662A9_12908/1-120" ]
[ "UUGAAUCGCAGAUAGAAAUAGGCUGUAUAAUCACAUAACCAAAUUAACGUUUAAGUGUCAUGUGCUGGCACUGGUCGUGAUGGGUGGGUUGUCCGAGAAUGGAUAGCCCAUUUUUAUUUC", "UUGAAUCGCAGAUAGAAAUAGGCUGUAUAAUCACAUAACCAAAUUAACGUUUAAGUGUCAUGUGCUGGCACUGGUUGUGAUGGGUGGGUUGUCCGAGAAUGGAUAGCCCAUUUUUAUUUC" ]
rfam_14_5_mafft
URS0000D6D29B_12908_1-91
UCAUCGAUCGGAAGCUCUGACACGUUCUCCUCAAGCCCACGGUCGCCGGAUGGGAGGCGCCGAGCUACUGGCGGGACCGGCCGAUCGGCGA
((.((((((((.(((.......(((.((((..........[[[[[[[.....)))))))....)))...]]]]]..]]..)))))))).))
[ "URS0000D6D29B_12908/1-91", "URS0000D6AED6_12908/1-65" ]
[ "UCAUCGAUCGGAAGCUCUGACACGUUCUCCUCAAGCCCACGGUCGCCGGAUGGGAGGCGCCGAGCUACUGGCGGGACCGGCCGAUCGGCGA", "-------CGGGAAGCUCUGACACGCGGUCC---------CGGCCGCCG---GGACCGCGCCGAGCCACUGGCGAGACCGACCCG-------" ]
rfam_14_5_mafft
URS0000D6D2C5_12908_1-94
GACCUUGCCACUUGGCAAAAGAUGACGAACGCUCAAAAGGACGCUGGUAGGCCGGUAACGGCUCGAACGCUUCCGAGUAAGGCAAAGCAGACAC
.....((((....)))).......................(.((.....(..((....))...)....))).......................
[ "URS0000D6D2C5_12908/1-94", "URS0000D6A2F7_709991/1-94", "URS0000D6A2F7_12908/1-94", "URS0000D6A2F7_457424/1-94", "URS0000D6A2F7_817/1-94", "URS0000D6A2F7_1121098/1-94" ]
[ "GACCUUGCCACUUGGCAAAAGAUGACGAACGCUCAAAAGGACGCUGGUAGGCCGGUAACGGCUCGAACGCUUCCGAGUAAGGCAAAGCAGACAC", "GACCUUGCCACUUGGCAAAAGAUGACGAACGCUCAAAAGGACGCUGGUAGGCCGGUAACGGUUCGAACGCUUCCGAGUAAGGCAAAGCAGACAC", "GACCUUGCCACUUGGCAAAAGAUGACGAACGCUCAAAAGGACGCUGGUAGGCCGGUAACGGUUCGAACGCUUCCGAGUAAGGCAAAGCAGACAC", "GACCUUGCCACUUGG...
rfam_14_5_mafft
URS0000D6D2C9_1346614_1-80
GGUACGGCCGGACGCCUGCGCUUUAAUGCGUGGGGCCCUGUGGCAGGGGCGUGCCAUUGAUAACCCGUAAGUAAUGGAGA
((((((........((((((........))))))...............))))))..........(....).........
[ "URS0000D6D2C9_1346614/1-80", "URS0000D69706_768492/1-78", "URS0000D67D00_399741/1-78", "URS0000D67D00_768491/1-78", "URS0000D6D2C9_12908/1-80", "URS0000D65EA6_1348660/1-78", "URS0000D65EA6_682634/1-78", "URS0000D6D435_1357297/1-77", "URS0000D6D435_12908/1-77", "URS0000D6D435_435998/1-77" ]
[ "GGUACGGCCGGACGCCUGCGCUUUAAUGCGUGGGGCCCUGUGGCAGGGGCGUGCCAUUGAUAACCCGUAAGUAAUGGAGA", "GGUACGGCCGGACGCCCGCA--UACACUUGCGGAGCCCUGUGGCAGGGGCGUGCCAUUUAUAAACCGUAAGUAGUGGAGA", "GGUACGGCCGGACGCCCGCG--AGACUCCGUGGGCCCCUGUGGCAGGGGCGUGCCAUUGAUAACCCGUAAGUAAUGGAGA", "GGUACGGCCGGACGCCCGCG--AGACUCCGUGGGCCCCUGUGGCAGGGGCGUGCCAU...
rfam_14_5_mafft
URS0000D6D2DA_12908_1-145
GCCUGCCUUUAAAUGUCGUACGAGCACCGAAAUCAAUUUUUUUAAUAUCAUAAUAAAAUCGGUCGACAUGUGUGCUCCGUUCUCUUGUAUAGGGAGAAGAAAGACAGAGUGAGGUAGCAGCGCGCUAGUAAUAGAUGCGCAGGAG
..(((((((....((((....((((((............................................))))))..((((...........))))....))))....)))))))..((((((((....))).))))).....
[ "URS0000D6D2DA_12908/1-145", "URS0000D6C6D2_12908/1-142", "URS0000D6A1F1_12908/1-142", "URS0000D6A1D3_12908/1-145", "URS0000D6BA8E_12908/1-144", "URS0000D6D063_12908/1-144", "URS0000D693FE_12908/1-144", "URS0000D6A746_12908/1-144", "URS0000D66292_12908/1-144", "URS0000D6B7AB_12908/1-144" ]
[ "GCCUGCCUUUAAAUGUCGUACGAGCACCGAAAUCAAUUUUUUUAAUAUCAUAAUAAAAUCGGUCGACAUGUGUGCUCCGUUCUCUUGUAUAGGGAGAAGAAAGACAGAGUGAGGUAGCAGCGCGCUAGUAAUAGAUGCGCAGGAG", "GCCUGCCUUUAAAUGUCGUACGAGCACCGAAAUCAACUUUUUUAAUAU--UAAUAAAAUCGGUCGACAUGUGUGCUCCGUUCUCUUGUAUA-AGAGAAGAAAGACAGAGUGAGGUAGUAGCGCCCUAGCAAUAGAUGCGCAGGAG", "GCCUGCCUUUAAA...
rfam_14_5_mafft
URS0000D6D2DF_12908_1-351
AGAUGGCUUGAUGGCGAUUGAGUAGAUAAGUUAUCAAUUAAAUAAUUCAAUCAAGAUGACUCACUUUAAGCGUGAAAGACCGCUGACAAAAGAGUCCGCACCGCUCUACGAAUUGCUAAAGGGCGAGGGCGAAAGUAGGUAAAGUGACACCACAGGACCUUCAAAACGGGCUAUGCUAAGUAGCCCAUAGCUAAGUCCUAUAUUAAGUAUAGGAUACGCUAAAAACGUGGCGAGAUGGGCUGAUACACACGAUGAGGACACGAACAGAGACCGAAAGGAAAGCAAGUAGGGCGUGCAGACGCUUGUAGAAAGUUCGUAUU...
......((((((....))))))...................................(((((......((((........)))).......))))).....(((((...[[[[[[[[[..)))))........................((((..............((((((.......)))))).((((...(((((...........)))))..)))).....)))).............................((((((.....((....))...((((((.............)))))).....))))))(((...
[ "URS0000D6D2DF_12908/1-351", "URS0000D6587E_12908/1-351" ]
[ "AGAUGGCUUGAUGGCGAUUGAGUAGAUAAGUUAUCAAUUAAAUAAUUCAAUCAAGAUGACUCACUUUAAGCGUGAAAGACCGCUGACAAAAGAGUCCGCACCGCUCUACGAAUUGCUAAAGGGCGAGGGCGAAAGUAGGUAAAGUGACACCACAGGACCUUCAAAACGGGCUAUGCUAAGUAGCCCAUAGCUAAGUCCUAUAUUAAGUAUAGGAUACGCUAAAAACGUGGCGAGAUGGGCUGAUACACACGAUGAGGACACGAACAGAGACCGAAAGGAAAGCAAGUAGGGCGUGCAGACGCUUGUAGAAAGUUC...
rfam_14_5_mafft
URS0000D6D2E1_293826_1-207
CAAUCGAAGGUCUGUGGUUGAAAGUCCAUGCCAGUCGCAGGCAAAAGGACCCACGUAAGAUAGCAAAAAAAUGAACUAUUGAUCAUGGUGCGGCUUAGAGGUAAGUCCUGCCGGCUCUUAAGUCGAGAGGGGAAGUAGUGAAAGUAACCCUUGAGCAAAACCUCCAGCAGGCGAGUGUGGGGUCAAAGACCAGGUCAGCUUCUGAUG
(.(((((((..((((((((.....(((.((((.[[[[[[))))...)))((((((....(................)...........]]]]]].............(((((((((....)))))...((((.....((..(((.....)))..))....))))..)))).....))))))......)))))...))))))).))))
[ "URS0000D6D2E1_293826/1-207", "URS0000D6A47C_1511/1-201" ]
[ "CAAUCGAAGGUCUGUGGUUGAAAGUCCAUGCCAGUCGCAGGCAAAAGGACCCACGUAAGAUAGCAAAAAAAUGAACUAUUGAUCAUGGUGCGGCUUAGAGGUAAGUCCUGCCGGCUCUUAAGUCGAGAGGGGAAGUAGUGAAAGUAACCCUUGAGCAAAACCUCCAGCAGGCGAGUGUGGGGUCAAAGACCAGGUCAGCUUCUGAUG", "UUUCUCAGAGUCUGUGGUUGCAAGUCCAAGCCAGAUGCGGGCAAAAGGACCCACGUAAGCU-GUACAAAAAUGAUAUAGUGAGCAUGGCGCAUCUUAGAGGU...
rfam_14_5_mafft
URS0000D6D2F3_12908_1-177
AAGAAUAUUAUAUAUUCUUAAAGAUGACUAAUGAUAAUUAUACUAGGACGCUUCUUGCAUGGUUAAAGUUUUAUUCAUUUACUUUAAUUUCAUUGGUAUAUAUUUAAGUAAGUAGAUUAAAUGAAUCGAUAAAUUUAUUGAGUCUUAUACAUUAGUUUCAAAGGAGAAUUUUGGUUC
((((...........))))......((((((((..(((..((((((...((.....))..(((((((...............)))))))...))))))...)))...(((((...............................))))).))))))))....................
[ "URS0000D6D2F3_12908/1-177", "URS0000D695A8_12908/1-154" ]
[ "AAGAAUAUUAUAUAUUCUUAAAGAUGACUAAUGAUAAU-UAUACUAGGACGCUUCUUGCAUGGUUAAAGUUUUAUUCAUUUACUUUAAUUUCAUUGGUAUAUAUUUAAGUAAGUAGAU-UAAAUGAAUCGAUAAAUUUAUUGAGUCUUAUACAUUAGUUUCAAAGGAGAAUUUUGGUUC", "-AGAAUA-UAUUUAUUCUUAAAGUUGAUUAAUGAUGUUAUAUGCUCGGACGCUUCUUGCAUGGUUAAGAGUUUGUUCAUUUAUCUUAAUUUCAUGGGUAUAUA-CUAUGUAAGUAUUUAUAAAUGAA---...
rfam_14_5_mafft
URS0000D6D2F4_12908_1-80
ACUGUGGAGUAUACGUGAACUUGUGAGUAGUAUAUUUAAUUUUGUGUUGAAUUAUGAAAGCAUAUACGUUGAAGCAGUAA
(((((...(((((........(((.....(((..((.............)).)))....))))))))......)))))..
[ "URS0000D6D2F4_12908/1-80", "URS0000D6B963_12908/1-74", "URS0000D6CF3E_12908/1-72", "URS0000D6D12C_12908/1-73", "URS0000D67C78_12908/1-73", "URS0000D676AB_12908/1-75", "URS0000D65D8B_12908/1-75", "URS0000D65D8B_999413/1-75", "URS0000D65D8B_469614/1-75", "URS0000D680DB_12908/1-75" ]
[ "ACUGUGGAGUAUACGUGAACUUGUGAGUAGUAUAUUUAAUUUUGUGUUGAAUUAUGAAAGCAUAUACGUUGAAGCAGUAA", "ACUGUGGAGUGUACAUGAAUCUGCGAGUAGUA-----AAUCACUUAGUG-AUUACCAAAGCAUACACAUUGAAGCAGUAA", "ACUGUGGAGUGUAGAUGAACUUGUAAGUAGU-------AUUGUUUAUAC-AGUACCAAAGCAUACACGAUGAAGCAGUAA", "ACUGUAGAGUGUACAAGAACUUGUGAGUAG-AUAUGAUUUCGGUCAAU------CCA...
rfam_14_5_mafft
URS0000D6D2F8_12908_1-87
UGCAGGCAAGCGCGGAGCUUGUAGAGGUCGUCGAAAGACGGCAGCCCGUUUUGGGUGGGAUCCUCGAAUCCGGGGCCCUGCACCGUC
(((((((...(.((((.....(.(((((((((....))))))..(((.....))).......))).).))))).).)))))).....
[ "URS0000D6D2F8_12908/1-87", "URS0000D69AAE_360910/1-85", "URS0000D6A256_243261/1-85", "URS0000D68954_1042878/1-85", "URS0000D68C99_1042878/1-85", "URS0000D6B15F_1366050/1-86" ]
[ "UGCAGGCAAGCGCGGAGCUUGUAGAGGUCGUCGAAAGACGGCAGCCCGUUUUGGGUGGGAUCCUCGAAUCCGGGGCCCUGCACCGUC", "UGUAGGCAAGCGCUGGGCUUGUAGAGGUCGUCGAGAGACGGCAGCCCU-UAUGGGUGGGACCCUCGAACCAGGGGCCUACAGACUA-", "UGCAGGCAAGCGCGGAGCUUGUAGAGGUCGUCGCAAGACGGCAGCCCA-GAUGGGUGGAAUCCUCGAAUCCGGGGUCUGCAACCCC-", "UGCAGGCAAGCGCGGAAC-UGUAGAGGUCGCCGACA...
rfam_14_5_mafft
URS0000D6D2FB_12908_1-79
CCUAUUGAGUGUUAUAUCAAAUGAUAGUAGACACAUGAGCAAAGUCCAUGUGUCGAGGUCAGACACGGUGAUGUAGGAA
(((((...(((((........(((.....(((((...............)))))....))))))))......)))))..
[ "URS0000D6D2FB_12908/1-79", "URS0000D6BF4C_12908/1-79", "URS0000D65CAA_12908/1-79", "URS0000D65DB7_12908/1-79", "URS0000D690EB_12908/1-79", "URS0000D68635_12908/1-77", "URS0000D68614_12908/1-76", "URS0000D6BA20_12908/1-75", "URS0000D69498_12908/1-75", "URS0000D6C18C_12908/1-75" ]
[ "CCUAUUGAGUGUUAUAUCAAAUGAUAGUAGACACAUGAGCAAAGUCCAUGUGUCGAGGUCAGACACGGUGAUGUAGGAA", "CCUAUUGAGUGUUACAUCAAAUGAUAGUAGACACAUGAGCAAAGCUCAUGUGUCAAGGUCAGACACGGUGAUGUAGGAA", "CCUAUUGAGUGUUACAUCAAAUGAUAGUAGACACAUGAGCUUUGCUCAUGUGUCAAGGUCAGACACGGUGAUGUAGGAA", "CCUAUUGAGUGUUAUACCAAAUGAUAGUAGACACAUGAGCUUUGCUCAUGUGUCGAGGUC...
rfam_14_5_mafft
URS0000D6D2FE_12908_1-130
GACCUAACCCCUAUGUUUUCAUAAGGUAUGGUUAAAAAUCCUAUCCUACAUAAAAAUGGUUUUCCAACCAGUACUUGUAGGAUAGGUCUAUGCUCGAAAGGGUGUAGUGGCAUUUUCGCAAGGACUUGUC
((((....((.((((....)))).))...))))......(((((((((((....(.((((......)))).)...))))))))))).((((((((....)))))))).((((..(........)..))))
[ "URS0000D6D2FE_12908/1-130", "URS0000D6BC04_12908/1-128" ]
[ "GACCUAACCCCUAUGUUUUCAUAAGGUAUGGUUAAAAAUCCUAUCCUACAUAAAAAUGGUUUUCCAACCAGUACUUGUAGGAUAGGUCUAUGCUCGAAAGGGUGUAGUGGCAUUUUCGCAAGGACUUGUC", "GACCUAACCCU--UGAUUUAUCGAGAUAUGGUCGUAAAUCCUAUCCUACAUAUUAAUGGUCUUCCGACCAGUACUUGUAGGAUAGGUCUAUGCUCGAAAGGGUGUAGUGGCGUCUCCGUAAGGAUUCGUC" ]
rfam_14_5_mafft
URS0000D6D301_441165_1-70
GCCGAGCCUAGCUAUGGCCAGCGAAGAGCCGGACACCUUCACCGGCCUGGCAGCGGCUUCCGAUUGAAGG
((((.(((..(((......))).....(((((...[[[[[[)))))..)))..)))).......]]]]]]
[ "URS0000D6D301_441165/1-70", "URS0000D6B757_441156/1-70" ]
[ "GCCGAGCCUAGCUAUGGCCAGCGAAGAGCCGGACACCUUCACCGGCCUGGCAGCGGCUUCCGAUUGAAGG", "UCUCUGCCUAGCUCGACGGAGCGAAAAACCGGACACCUUCACCGGCCUGGCAGAGGUACCCGAAUGAAGG" ]
rfam_14_5_mafft
URS0000D6D308_12908_1-95
GGCUCGGGAGUGGACCUGUGGGAGGGUCCGCAUGAAUGGAGCCACACCCCCCGUUUCGCAAGCGGCGCGGCGCCUGAUGCCCGACAGCGCGCCCG
(((((....((((((((......)))))))).......)))))........................((((((.((........)))))..).))
[ "URS0000D6D308_12908/1-95", "URS0000D6C314_12908/1-92", "URS0000D68C3B_12908/1-92", "URS0000D6C1B7_12908/1-92", "URS0000D69FB8_12908/1-93", "URS0000D6D225_12908/1-92", "URS0000D69E13_12908/1-92", "URS0000D6BFCD_12908/1-92", "URS0000D6A238_12908/1-93", "URS0000D6C2F9_12908/1-93" ]
[ "GGCUCGGGAGUGGACCUGUGGGAGGGUCCGCAUGAAUGGAGCCACACCCCCCGUUUCGCAAGCGGCGCGGCGCCUGAUGCCCGACAGCGCGCCCG", "GGCUCGGGAGUGGACCUGUGGGAGGGUUCGCAUGAAUUGGGCCAAA--CCCUGUUUCGCAAGCGGCGCGGUGCCAGAUGCCCAACUGCGCCGCC-", "GGCCCGGGAGCGCGCCUGUGGGAUGGCGCGCGGGAAUAGGGCCCAC--ACCCGUUUCGCAAGCGGC-CGGCGGCUGAGGCCCGACAGCCCGCCCG", "GGCUCGGGAGCG...
rfam_14_5_mafft
URS0000D6D322_12908_1-123
CGCCUAAACUCACCGUUUUUCUUAGUGAGCAUGGUGCAAAAGCCAACCAAGGUACUGAGCUCGUCGUCAGAGCACCUUGGUUGGUCAUAUCUCGAAAGGGGUAUGGGUAGCCGAAAGGCUAUC
((((....(((((.(.......).)))))...))))......(((((((((((.....((((.......))))))))))))))).((((((((....))))))))(((((((....)))))))
[ "URS0000D6D322_12908/1-123", "URS0000D6AB4B_12908/1-119", "URS0000D6A68C_12908/1-120" ]
[ "CGCCUAAACUCACCGUUUUUCUUAGUGAGCAUGGUGCAAAAGCCAACCA--AGGUACUGAGCUCGUCGUCAGAGCACCU-UGGUUGGUCAUAUCUCGAAAGGGGUAUGGGUAGCCGAAAGGCUAUC", "CGCCUAAACCCAUAAAUCU------UGGGCAUGGCGCAAAAACCUUUCA-CAGAUAUUAAGCUCGUCGUCAGAGCAUCUGUGAAAGGUCAUAUCUCGAAAGGGGUAUGGGUGGUCGCAAGGCCAUC", "UGCCUAAACUCUAUUUAAU------AGGGCAUGGCACAAAAACCCAGUAAG...
rfam_14_5_mafft
URS0000D6D332_12908_1-85
CGCGCCACAGGAGGCUUUGACGCGCGGCCAUUCCCACGGCCGCCGAGACCGCGCCGAGCCACCGGCGAGACCGACCUGCGGCGAC
..((((.((((.(((......((((((.(........[[.[[[[..).))))))...)))...]]]]...]]..)))).))))..
[ "URS0000D6D332_12908/1-85", "URS0000D666BA_12908/1-85" ]
[ "CGCGCCA-CAGGAGGCUUUGACGCGCGGCCAUUCCCACGGCCGCCGAGACCGCGCCGAGCCACCGGCGAGACCGACCUGCGGCGAC", "-GCGCCAGCGGGAGGCUCUGACACGCGGCCCAUGCUCCGGCCGCCGGGACCGCGUCCAGCCACUGGCGAGACCGACCUGCGCAUGC" ]
rfam_14_5_mafft
URS0000D6D335_12908_1-71
GAAGCGCGAACCAAGCGGGCGCAUAAGGGCGCUGUGAGGCUUGGAGCUGGCCUUGGUAACGGGGCCAUACA
..........(((((..(((..........)))......)))))...((((((((....))))))))....
[ "URS0000D6D335_12908/1-71", "URS0000D6CE4F_12908/1-71", "URS0000D6AAB3_12908/1-71", "URS0000D686C6_12908/1-69", "URS0000D66283_12908/1-69", "URS0000D6AB05_12908/1-69", "URS0000D66E21_12908/1-69", "URS0000D6D0D4_12908/1-70", "URS0000D6C867_12908/1-71", "URS0000D67C0A_12908/1-71" ]
[ "GAAGCGCGAACCAAGCGGGCGCAUAAGGGCGCUGUGAGGCUUGGAGC-UGGCCUUGGUAACGGGGCCAUACA", "GAAGCGCGAACCAAGCGGUCAUCGACUGGUGGCGUGAGGCUUGGAGC-UGGCCUUGGUAACGAGGCCAUGCA", "GAAGUGCGAACCAAGCGGGCGCGUAAAAGCGUCGUGAGACUUGGAGC-UGGCCUUGGUAACGAGGCCAUGUA", "GAAGCGCGAACCAAGCGGCGGC--GAAAGCCGCGUGAGACUUGGAGC-UGACCUUGGUAACGAGGCCAUGCA", "GAA...
rfam_14_5_mafft
URS0000D6D336_12908_1-66
ACGACCCUGUUCUGUCCGAAGUCUGACGCACCGCGUCAGGUAUUAAUGUAGGCAGAGUGGGGUCUU
(.(((((((((((..((...(((((((((...))))))))).........)).))))))))))).)
[ "URS0000D6D336_12908/1-66", "URS0000D6A75D_12908/1-65", "URS0000D69967_12908/1-65" ]
[ "ACGACCCUGUUCUGUCCGAAGUCUGACGCACCGCGUCAGGUAUUAAUGUAGGCAGAGUGGGGUCUU", "ACUCCCCUG-UCUGACCGAAGUCUGACGUUAUGCGUCAGAUACUUAUGUAGGUCAGGCGGGGUUUU", "AAAACCCUG-UCUGACCGAAGUCUGACGUUAUGCGUCAGAUACUGAUGUAGGUCAGGUGGGGUUUU" ]
rfam_14_5_mafft
URS0000D6D33C_12908_1-48
UGGCUUGGGCGUAAGCUCUUUGGGCCACCGCAGGCGGGAAGAAUUUCC
((((((((((....))))...)))))).....................
[ "URS0000D6D33C_12908/1-48", "URS0000D6CCE1_12908/1-48", "URS0000D6972F_12908/1-48", "URS0000D68FF1_657324/1-48", "URS0000D6CEFB_12908/1-48", "URS0000D69DD0_12908/1-48", "URS0000D66465_1280668/1-48", "URS0000D66DA0_12908/1-48", "URS0000D6B5D9_12908/1-48", "URS0000D686A6_12908/1-48" ]
[ "UGGCUUGGGCGUAAGCUCUUUGGGCCACCGCAGGCGGGAAGAAUUUCC", "UGGUCUGGGCAGAAGCUCUUUGGACCACCGUAGACGGGGAGAAUUCCC", "UGGCUUGGGCGUAAGUUCUUUGGGCCACCGCAGGCGGGAAGAAUUUCC", "UGGACUGGGCGAGAGCUCUUUGGUCCACCGUAGACGGGAAGAAUUUCC", "UGGUCUGGGCGAAAGUUCUUUGGACCACAGUAGGCGGGAAGAAUUCCC", "UGAACUGAGCGAAAGCUCUUUGGUUCACCGUAGACGGGAAGAAUU...
rfam_14_5_mafft
URS0000D6D358_12908_1-60
GGGUUCUGAAGUUUAUAUUUUAAGCUUCAGAAGGGACUGUAGAUGGUCGGGCCGCCAUCC
....(((((((((.........)))))))))..........((((((......)))))).
[ "URS0000D6D358_12908/1-60", "URS0000D6938A_12908/1-51", "URS0000D66E5D_12908/1-52", "URS0000D660F6_12908/1-51" ]
[ "GGGUUCUGAAGUUUAUAUUUUAAGCUUCAGAAGGGA-CUGUAGAUGGUCGGGCCGCCAUCC-", "GGGUUCGGAA-----------UAAUUUCCGAAGGGUUAACUGGAUGGUCGGGCCGCCAUUCG", "GGGUCCGGAAGCUUUUU------GCUGCCGGAGGA---UUUAGAUGGUCGGGCCGCCAUCU-", "GGGUUCGGGAAGAUUUU-------CUCCCGGAGGA---CUUGGGUGGUCGGGCCGCCACUC-" ]
rfam_14_5_mafft
URS0000D6D35A_1121354_1-131
CUGCCCCGCGGUCGCUGAUGUGCGACGGAGUCCGCCGCGGACGGCAGCAGUUUUUAAAGACGUCCAUCGCACCGCUCCCCGCGCCGACGGGGUGCGGCCCGAGAACGGGAGAGAACGCUGAGCGUUACAAC
(((((((((((.......................))))))..)))))........................((((.(((((......))))).))))..................................
[ "URS0000D6D35A_1121354/1-131", "URS0000D67A9B_558173/1-129" ]
[ "-CUGCCCCGCGGUCGCUGAUGUGCGACGGAGUCCGCCGCGGACGGCAGCAGU--UUUUAAAGACGUCCAUCGCACCGCUCCCCGCGCCGACGGGGUGCGGCCCGAGAACGGGAGAGAACGCUGAGCGUUACAAC", "UUGUCACCGUCGUCGCUGAUGUGCGACGGAGUCCGC----GACGGUGGCAGUGAGUUUUAAGACGUCCAUCGCACCGAGCAGGGCACUCGCCCUGU-CGGCCCGAGAACGGGAGAGAACGCUGAGCGUUACCAC" ]
rfam_14_5_mafft
URS0000D6D35B_12908_1-106
UCACUCCCAGAUGUUCCACCGUACGUGUCCGUGAAAGCGGAGGCAGGCGGAGACGACUCGAAACCGAACGCGGCAAAGCACGACCUGGGCGCGUCAGAGUCUCCGA
.....(((((..........((.(((((((((....)))))......[[[[[[[...(((....)))[[[[[......)))))))))))]]]]]....]]]]]]].
[ "URS0000D6D35B_12908/1-106", "URS0000D65FC7_12908/1-102" ]
[ "UCACUCCCAGAUGUUCCACCGUACGUGUCCGUGAAAGCGGAGGCAGGCGGAGACGACUCGAAACCGAACGCGGCAAAGCACGACCUGGGCGCGUCAGAGUCUCCGA", "GCACUCCCAGAAGAU---CCGUACGUGUCCGCGCAAGCGGAGGCAGACGGGGACGAUCCGAUA-GGAACGCGGCAAAGCACGACCUGGGCGCGUCCGAGUCCCCCG" ]
rfam_14_5_mafft
URS0000D6D360_12908_1-135
AUUAAUUGAGGGCAGAAAGGUUCCUGCCACACCUAACUUGAGGCAUUAAUUAAGAUGUCGGUACUAUUUUAUAGUUGUAAAUCUUGCAUUUACAUAGGUAUCUGAGAUGUUGGGUACACCGUCCAACCAAUUAAU
((((((((..(((((...[[[..))))).((((((...........................................................)))))....)....(((((....]]]..)))))))))))))
[ "URS0000D6D360_12908/1-135", "URS0000D6B7F3_12908/1-135" ]
[ "AUUAAUUGAGGGCAGAAAGGUUCCUGCCACACCUAACUUGAGGCAUUAAUUAAGAUGUCGGUACUAUUUUAUAGUUGUAAAUCUUGCAUUUACAUAGGUAUCUGAGAUGUUGGGUACACCGUCCAACCAAUUAAU", "AUUAAUUGAGGGCAGAAAGGUUCCUGCCGCACCUAACUUGAGGCAUUAAUUAAGAUGUCGGUACUAUUUUAUAGUUGUAAAUCUUGCAUUUACAUAGGUAUCUGAGAUGUUGGGUACACCGUCCAACCAAUUAAU" ]
rfam_14_5_mafft
URS0000D6D363_12908_1-201
CUAGCAUAUUGUUUGGAGAAUUAUUCUCCUAGAAUAAUUUGAUGAAGCGUAAUAUCUGGGGUUACACGCUUAUUUGUAAUGCAACAAAAGUUGUUAUAAAAUACAACAGCAAUAGUUGGUAGCUAUAAAAGGCGUGUGGGAAGCCCUUUCGCGAAUACUAAAGUUGUGGUGACAAAAAAAAUUAUUAGUAAGCUAACUUUG
((((.(((((((..................................))..)))))))))........(((((((.((............................(((((..(((......((...........................)).....)))..)))))................)).)))))))........
[ "URS0000D6D363_12908/1-201", "URS0000D69D00_12908/1-198" ]
[ "CUAGCAUAUUGUUUGGAGAAUUAUUCUCCUAGAAUAAUUUGAUGAAGCGUAAUAUCUGGGGUUACACGCUUAUUUGUAAUGCAACAAAAGUUGUUAUAAAAUACAACAGCAAUAGUUGGUAGCUAUAAAAGGCGUGUGGGAAGCCCUUUCGCGAAUACUAAAGUUGUGGUGACAAAAAAAAUUAUUAGUAAGCUAACUUUG", "CUAGCAUAUUAUUUGGAGAAUUAUUUUCCUAAAAUAUUUUUAUGAAAAAUAGUAUCUUGGGCUACACGCUUAUACAUAAUGCAACGUUA-UUGCUAUAAAAUACAACA...
rfam_14_5_mafft
URS0000D6D36C_12908_1-222
GAUGGGUCAGGACAGUAACCGGCAGCGGCGAAGCAGCACCCUUGCAGAAGGAGAGCUUGUUCCCGGCACGGCCAAAACAAUCCUCUGAUGCAGUCAGCCGGACGCUGCUUGCAUGGCGGGCAAACGUGCGGAUAGCCCGUUCCAUGGCUGGUACUGCCACGCGGAUAGAACACGCACCCAAGAAUAAUUCCGUACAGGGGAUGCCCUAACGGGCGAGGAGAA
...((((...........((......)).........)))).......................(((...)))......((((((((..(((((((((((...((.....))..(((((((.............)))))))...))))))..)))))...(((((.......................))))).))))))))....................
[ "URS0000D6D36C_12908/1-222", "URS0000D6BC86_12908/1-222" ]
[ "GAUGGGUCAGGACAGUAACCGGCAGCGGCGAAGCAGCACCCUUGCAGAAGGAGAGCUUGUUCCCGGCACGGCCAAAACAAUCCUCUGAUGCAGUCAGCCGGACGCUGCUUGCAUGGCGGGCAAACGUGCGGAUAGCCCGUUCCAUGGCUGGUACUGCCACGCGGAUAGAACACGCACCCAAGAAUAAUUCCGUACAGGGGAUGCCCUAACGGGCGAGGAGAA", "GAUGGGUCAGGACAGUAACCGGCAGCGGCGAAGCAGCACCCUUGCAGAAGGAGAGCUUGUUCCCGGCACGGCCAAAACAAUCCUCUG...
rfam_14_5_mafft
URS0000D6D36E_12908_1-98
CUGCGUCCGACCACGUACGGGGCCCGUCCACGUCCGCCUCGGCGGCCGGAUGCAAGGGCCCGCGAUGGCACGGUAGGGUGAGUGGGAGCACGCUCAUG
.............(((...(((((((((.....((((....))))...)))....)))))))))..................................
[ "URS0000D6D36E_12908/1-98", "URS0000D66C92_12908/1-97", "URS0000D65C6F_12908/1-95", "URS0000D67822_12908/1-92", "URS0000D695EA_12908/1-95" ]
[ "CUGCGUCCG--ACCACGUACGGGGCCCGUCCACGUCCGCCUCGGCGGCCG-GAUGCAAGGGCCCGCGAUGGCACGGUAGGGUGAGUGGGAGCACGCUCAUG", "--GCAGUCGGCACCUCGUACGGGGCCCGUCCGCG-CCGCCUCGGCGGCCGUGAUGCAAGGGCCCGCGAUGACCCGGCAGGGCUGGAGGAGACCGCACAUG-", "--CGAGCCGGCACCUCGUACGGGGCCCGUCCGCG-CCGCUCCGGCGGCCGUGAUGCAAGGGCCCGCGAUGACCCGACCGGGACGAGGAGACGCGCAUG---...
rfam_14_5_mafft
URS0000D6D378_443218_1-79
UGCGUCACGCAAGUGGGCCGAGGGUCGACUCCUGUGACGAAGGGGCUUCGAGGCACUGUCCCGCCCCGGAAAGUGGCAA
..((((((.........................))))))..(((((................)))))............
[ "URS0000D6D378_443218/1-79", "URS0000D6C610_164757/1-74", "URS0000D6C610_164756/1-74", "URS0000D6B96B_685727/1-68", "URS0000D6B96B_525370/1-68", "URS0000D68036_1108045/1-74" ]
[ "UGCGUCACGCAAGUGGGCCGAGGGUCGACUCCUGUGACGAAGGGGCUUCGAGGCACUGUCCCGCCCCGGAAAGUGGCAA", "AGCGCCGCGCAAGUGGGCCGAGGGUCGACUCCGGCGGCGCAGGGGUCGUCA-----GCCCCGACCCCGGAAAGCUGUGG", "AGCGCCGCGCAAGUGGGCCGAGGGUCGACUCCGGCGGCGCAGGGGUCGUCA-----GCCCCGACCCCGGAAAGCUGUGG", "GGCGUCACGCAAGUGGGCCGAGGGUCGACUCCGGUGACGCAGGGGC-----------GGU...
rfam_14_5_mafft
URS0000D6D38A_1174528_1-79
GCACUGGCAGAACGUUAAACCGCUCAAGUUCUUUAUAUGUAGUCACCAUCAAAAGCGAUGCUAAAACUACCGACAGUGC
((((((..((((................))))......(((((......................)))))...))))))
[ "URS0000D6D38A_1174528/1-79", "URS0000D67C7B_372781/1-78" ]
[ "GCACUGGCAGAACGUUAAACCGCUCAAGUUCUUUAUAUGUAGUCACCAUCAAAAGCGAUGCUAAAACUACCGACAGUGC", "GCACUGGCAGAACGUUAAACCGCUUAAGUUCUUGAUA-GUAGUUACCAUCAAAAGUGAUGUUAAAACUAUUAACGGUGC" ]
rfam_14_5_mafft
URS0000D6D391_12908_1-71
GAAGUGCGAACCAAGCAGUCACACGCUGGUGAUGUGAGACUUGGAGCUGACCUUGGUGACGGGGUCAUGCA
..........(((((..(((((......)))))......)))))...((((((((....))))))))....
[ "URS0000D6D391_12908/1-71", "URS0000D6C292_12908/1-71", "URS0000D67A1D_12908/1-71", "URS0000D66A60_12908/1-71", "URS0000D6C96C_12908/1-71", "URS0000D6C63C_12908/1-71", "URS0000D6CD86_12908/1-71" ]
[ "GAAGUGCGAACCAAGCAGUCACACGCUGGUGAUGUGAGACUUGGAGCUGACCUUGGUGACGGGGUCAUGCA", "GAAGCGCGAACCAAGCAGUCACCCGCUGGUGGCGUAAGGCUUGGAGCUGGCCUUGGUAACGAGGCUAUGCA", "GAAGCGCGAACCAAGCAGUCACCCACUGGUGGCGUGAGACUUGGAGCUGGCCUUGGCAACGAGGCCAUGCA", "GAAGCGCGAACCAAGCAGUCACCCACUGGUGGCGUGAGGCUUGGAGCUGGCCUUGGUAACGAGGUCAUGCG", "GAAGCGC...
rfam_14_5_mafft
URS0000D6D39B_12908_1-258
CGAACUCGGGUCUGUGGUUGAAAAUCGAUGCCAGCUGCGGGCAAAGCGAUCCACGUAAGCCGUUCAAAGAGCGGUGAUCAUGGGGCAGUUUAGAGGUAAGACCGGCCAGGCACUUGCUUUGUAGGAAAGACAAACUUCGGUUGCGCAUCCGUCAAAUGUAAGAUUCCUGAGAGGGGUAGUAGUGGGGAGGCAGAUAGCCUUAGGAGCGAACCCUCCAGCCGGCGGAUGUGGGGACAAAGACCAGGUCAGCCGAUGCUG
((...((((..((((((((.....(((.((((.[[[[[.))))...)))((((((.....(.(.....).).............]]]]].............((((((((.(...................................................).))))...((((.....((....(((.......))).....))....))))..)))).....))))))......)))))...)))))))...))
[ "URS0000D6D39B_12908/1-258", "URS0000D67ED1_12908/1-257", "URS0000D69E6A_12908/1-257" ]
[ "CGAACUCGGGUCUGUGGUUGAAAAUCGAUGCCAGCUGCGGGCAAAGCGAUCCACGUAAGCCGUUCAAAGAGCGGUGAUCAUGGGGCAGUUUAGAGGUAAGACCGGCCAGGCACUUGCUUUGUAGGAAAGACAAACUUCGGUUGCGCAUCCGUCAAAUGUAAGAUUCCUGAGAGGGGUAGUAGUGGGGAGGCAGAUAGCCUUAGGAGCGAACCCUCCAGCCGGCGGAUGUGGGGACAAAGACCAGGUCAGCCGAUGCUG", "CGAACUCGGGUCUGUGGUUGAAAAUCGAUGCCAGCUGCGGGCGAAGCGAUC...
rfam_14_5_mafft
URS0000D6D39E_12908_1-225
CACGGUCUGACGCAGUAACCGCCGGAAGGCGGCGAAGCAGUACCCAUGCAGAAGGAGAGAUUAUUCCCGGCAAAAGCCAAAACAAUCCGCCGGUGCAGACGGCUGGACGCUGCUUGCAUGGCAGGCCGAUGUGCGCGGGCCUGUUUCAUAGCCGGACUGCCACGAGGGUAGAACGCGCACCCGACAAUCAUCCCUUACGGCGGGUGCCCGAACGGGCAAGGAGAA
...((.............((..........))...........)).......................(((....)))......((((((((..((((.((((((...((.....))..(((((((............)))))))...))))))..))))...(((((.......................))))).))))))))....................
[ "URS0000D6D39E_12908/1-225", "URS0000D6CCE6_12908/1-210" ]
[ "CACGGUCUGACGCAGUAACCGCCGGAAGGCGGCGAAGCAGUACCCAUGCAGAAGGAGAGAUUAUUCCCGGCAAAAGCCAAAACAAUCCGCCGGUGCAGACGGCUGGACGCUGCUUGCAUGGCAGGCCGAUGUGCGCGGGCCUGUUUCAUAGCCGGACUGCCACGAGGGUAGAACGCGCACCCGACAAUCAUCCCUUACGGCGGGUGCCCGAACGGGCAAGGAGAA", "CACGGUCUGACGCAGUAACCGCCGGAAGGCGGCGAAGCAGUACCUAUGCAGAAGGAGAGCUUAUUCCCGGCAAAAGCCAAAACA...
rfam_14_5_mafft
URS0000D6D3B6_12908_1-53
AGAUUUGGUCGUAGAGCCACGACCAAGCAAAUCAAAAGAAAGCUCACGAGAGA
.....((((((..[[[[..))))))................]]]]........
[ "URS0000D6D3B6_12908/1-53", "URS0000D6BA17_12908/1-50", "URS0000D67634_12908/1-50", "URS0000D6A933_12908/1-52", "URS0000D6A933_1262816/1-52", "URS0000D6B118_12908/1-51", "URS0000D678AE_12908/1-52", "URS0000D67A9E_12908/1-52", "URS0000D6D1AF_12908/1-52", "URS0000D6A0CB_12908/1-52" ]
[ "AGAUUUGGUCGUAGAGCCACGACCAAGCAAAUCAAAAGAAAGCUCACGAGAGA", "AAGAUUUCUCGUAGAGCCACGAGAAG--UAAAUUAAAGAAAGCUCACUGAGA-", "AAGAUUUCUCGUAGAGUCACGAGAAG--UAAAUUAAAGAAAGCUCACUGAGA-", "GAACUGGUUCGUAGAGCCACGAGCAGGGUAAACAAAAGAAAGCUCAAUGAGA-", "GAACUGGUUCGUAGAGCCACGAGCAGGGUAAACAAAAGAAAGCUCAAUGAGA-", "UGAUUUGUUCGUAGAG-CGC...
rfam_14_5_mafft
URS0000D6D3CE_12908_1-111
GUGCUGUGAUGUAAAUCAAUGAUUCGGGCAGAGGGUUUACGGAGCUUUAACAGUGGGUUCGCGAAAUUCCGCAACUCGAAUAGGUGUAAAAACCGAAAGAAAAUCGCAAAA
(.((......(((((((..((..[[[[.))...)))))))...)).)..............(((...........]]]]...(((......))).........))).....
[ "URS0000D6D3CE_12908/1-111", "URS0000D6C23D_12908/1-111" ]
[ "GUGCUGUGAUGUAAAUCAAUGAUUCGGGCAGAGGGUUUACGGAGCUUUAACAGUGGGUUCGCGAAAUUCCGCAACUCGAAUAGGUGUAAAAACCGAAAGAAAAUCGCAAAA", "GUGCUGUGAUGUAAAUCAAUGAUUCGGGCAGAGGAUUUACGGAGCUUUAACAGUGGGUUCGCGAAAUUCCGCAACUCGAAUAGGUGUAAAAACCGAAAGAAAAUCGCAAAA" ]
rfam_14_5_mafft
URS0000D6D3CF_12908_1-38
UAGGCGGAUUCUGAAAAGCCUGAUAGAAAGAGUAAGAA
.((((....[[[.....)))).............]]].
[ "URS0000D6D3CF_12908/1-38", "URS0000D68AAA_12908/1-36", "URS0000D687F9_12908/1-35", "URS0000D6AA43_12908/1-36", "URS0000D67A62_12908/1-36", "URS0000D6B423_12908/1-38", "URS0000D69578_12908/1-36", "URS0000D67833_12908/1-36" ]
[ "UAGGCGGAUUCUGAAAAGCCUGAUAGAAAGAGUAAGAA", "ACGGCAGAUUCUGAAAAGCCGG--UAACAGAGUAAGAG", "UAAGGGGAUGCUGAAAACCUUG---AAAAGAGUAAGCU", "UAGGCGGGUUCCGAAAAGCCUA--AGAAAGAGUAGGAA", "UAGGCGGAUUCCGAAAAGCCUU--UGAAAGAGUAGGAA", "UAGGCGGAUUCCGAAAAGCCGAGAAAAGAGAGUAGGAU", "UAGGCGGGUUCCGAAAAGCCUG--AAAGAGAGUAGGAG", "AAGGCGG...
rfam_14_5_mafft
URS0000D6D3D5_12908_1-161
CCAGUCCCCCGAAGACUACAAAUAUACCAAACCCCUAAAGGAAGCCACAAGCGUGAGCUAGAGUACUAUGGACUAUACAACGGUCAACCCUAUAAUAGGGUCAGGAGAAGGAAAAGGGUUAUCUACGAAUAAGUAUUAGAAAUAAGUAGAGUAGUCUUCUU
..........((((((((.......(((..........((...(((((....))).)).......))...((((.......)))).(((((.....)))))...............)))..(((((...................))))).))))))))..
[ "URS0000D6D3D5_12908/1-161", "URS0000D66CEB_12908/1-161" ]
[ "CCAGUCCCCCGAAGACUACAAAUAUACCAAACCCCUAAAGGAAGCCACAAGCGUGAGCUAGAGUACUAUGGACUAUACAACGGUCAACCCUAUAAUAGGGUCAGGAGAAGGAAAAGGGUUAUCUACGAAUAAGUAUUAGAAAUAAGUAGAGUAGUCUUCUU", "CCAGUCCCCUGAAGACUACAAAUAUACCAAACCCCUAAAGGAAGCCACAAGCGUGAGCUAGAGUACUACGGACUAUACAACGGUCAACCCUAUAAUAGGGUCAGGAGAAGGAAAAGGGUUAUCUACGAAUAAGUAUUAGAAAUAAGUA...
rfam_14_5_mafft
URS0000D6D3D7_290400_1-59
GGGUCCGCAGUUCACCCUGUCGUCGCCGAUGCGAUUCAUGCAUCACGCUAAACCUGCCU
((((.........))))..........((((.........))))...............
[ "URS0000D6D3D7_290400/1-59", "URS0000D6791D_12908/1-55", "URS0000D65AE7_326297/1-54" ]
[ "GGGUCCGCAGUUCACCCUGUCGUCGCCGAUGCGAUUCAUGCAUCACGCUAAACCUGCCU", "GGGUCAACAGUUCACCUAGGCGUUGCCGGAGCC---UCUUGCUCACGCUAAACCUGCU-", "GGGUCUGCAGUUCACCCAGACAUCGCCGCGGCG-----UAAGCCGAGCUAAACCUGCCU" ]
rfam_14_5_mafft
URS0000D6D3DD_12908_1-123
UCAUCCUCAGAUUCUACAAUGAUUUUUAGCCCCGUCACGGUCGCCUAAAGGCGAGGGAUUCAUGACAGAGCAUGUUUAUCAUGCACGUGGUAAAGCCGUACCUGAGCACGUUUGAUGUUAUGU
.....(((((.......................((.(((((((((....)))))......[[[[[[[..((((.......))))[[[[[......)))))))))))]]]]]....]]]]]]].
[ "URS0000D6D3DD_12908/1-123", "URS0000D66186_715225/1-119" ]
[ "UCAUCCUCAGAUUCUACAAUGAUUUUUAGCCCCGUCACGGUCGCCUAAAGGCGAGGGAUUCAUGACAGA-GCAUGUUUAUCAUGCACGUGGUAAAGCCGUACCUGAGCACGUUUGAUGUUAUGU", "CACCUCUCAGAUUCUAC-----UUUUGUAGCCCGUCACGGUCGCCGCAAGGCGAGGGAGUCAUGACAGACUUAUAUUUAAUAUAAACGUGGUAAAGCCGUACCUGAGCACGUCUGAUGUCAUGU" ]
rfam_14_5_mafft
URS0000D6D3E1_12908_1-124
AGCCUAAACUAGCAAGUAAUUGUUGGCAUGGCGAAAGAAAACCGUUGAAGAUAAAGAACCCAUCAUAUGGGAUUUGUCUUCAACGGCCGUAUCGGGAAACUGGUACGGAAGGCUCCGAGCCUUC
.(((....(((((((....)))))))...))).........(((((((((((..(...((((.....)))).)..))))))))))).((((((((....))))))))((((((.....))))))
[ "URS0000D6D3E1_12908/1-124", "URS0000D6BE69_12908/1-119" ]
[ "AGCCUAAACUAGCAAGUAAUUGUUGGCAUGGCGAAAGAAAACCGUUGAAGAUAAAGAACCCAUCAUAUGGGAUUUGUCUUCAACGGCCGUAUCGGGAAACUGGUACGGAAGGCUCCGAGCCUUC", "UGCCUAAACCUUUAG--AGAUAAAGGCAUGGCG--AGAAGGCCGUUCAAGAUAAAAAACCCAUCAUGUAGAAUUUGUCUUGAACGGCCGUAUCGGGAAACUGGUACGGAGGGCUUUGGUCCUC-" ]
rfam_14_5_mafft
URS0000D6D3E7_12908_1-256
CUCUUCCAGGUCUGUGGUUGCGGAGGCACCGAUCUGCCUCCUAGUCCAUGACAGACGAGGUCAAAGGGAUCCACGUAAGCCAGCGUGUGGGCAUGCUGGCGAUCAUGGCUCGUCCUAGAAGCAAGUCGCACUGCCUGAUCGGCUUUGGGGCAAAGAGCCCCACAGGCAAGAGGGCUUUGAGUGGGGGUGCCUGAGCAUCCGAAGCGGAGGCCCCGGUGCGCGGGUGUGGGGCCAAAGACCAGGUCAGCUGGAAGAG
(((((((((..((((((((.........................(((.((((.[[[[[[))))...)))((((((.......(..........)..............]]]]]].............((((((((((.........................))))))...((((.....((.....(((....)))......))....))))..)))).....))))))......)))))...))))))))))))
[ "URS0000D6D3E7_12908/1-256", "URS0000D65761_12908/1-254" ]
[ "CUCUUCCAGGUCUGUGGUUGCGGAGGCACCGAUCUGCCUCCUAGUCCAUGACAGACGAGGUCAAAGGGAUCCACGUAAGCCAGCGUGUGGGCAUGCUGGCGAUCAUGGCUCGUCCUAGAAGCAAGUCGCACUGCCUGAUCGGCUUUGGGGCAAAGAGCCCCACAGGCAAGAGGGCUUUGAGUGGGGGUGCCUGAGCAUCCGAAGCGGAGGCCCCGGUGCGCGGGUGUGGGGCCAAAGACCAGGUCAGCUGGAAGAG", "CUCUUCCAGGUCUGUGGUUGCGGAGGCACCGAUCUGCCUCCUAGUCCAUGACA...
rfam_14_5_mafft
URS0000D6D3ED_12908_1-91
GGCAGGUAAGCGCGGGAACUACCUCAGGUCGCCGAAAGGCGGCAGCCGGCUAACCCCCGGUGGGAUCCUGAGGCCCGGGACCUGCUUUUUA
(((((((...(.((((.....((((((((((((....))))))..((((.......)))).......))))))))))).))))))).....
[ "URS0000D6D3ED_12908/1-91", "URS0000D6D334_12908/1-89" ]
[ "GGCAGGUAAGCGCGGGAACUACCUCAGGUCGCC--GAAAGGCGGCAGCCGGCUAACCCCCGGUGGGAUCCUGAGGCCCGGGACCUGCUUUUUA", "UGCAGGUAUGCGCGGGACCAACUUCAGGUUGCUCGCAAGAACGGCAGCCCCAAGA----GGGUGGGAUCCUGAAGCCCGGGACCUGCUUUUUU" ]
rfam_14_5_mafft
URS0000D6D3F1_12908_1-69
UUAACAAGAAUGUUUGGGACAAAUCCCAGUGGGAAAGCCCGCCUCGGCGGACUACUAGACAUUCUGACC
......((((..(((((......((((...)))).((.((((....)))).)).)))))..))))....
[ "URS0000D6D3F1_12908/1-69", "URS0000D6CE63_12908/1-64", "URS0000D67E3C_12908/1-69" ]
[ "UUAACAAGAAUGUUUGGGACAAAUCCCAGUGGGAAAGCCCGCCUCGGCGGACUACUAGACAUUCUGACC", "-GAAAUAAGAAACUCGGGACAAAUCCCAGUGGGAAAGUU--CCUCGG--AACUACCGAGACUUCUAACC", "UUAACAAGAAUGUUUGGGGCAAAUCCCAGUGGGAAAGUCUGCUUCGGCAGACUACUAAACAUCCUGACC" ]
rfam_14_5_mafft
URS0000D6D3FA_12908_1-130
AAACUAAGAGGUGGAAAGUGACCUUCCAUACGCCUACGGUAUAGGAAACUAUACAAAGGGUGAUAGAAGCCCGUAACAGGUUAAGCUGACGAGGAUAAGAGAUUUCGGAAUUGGUCUCCGAACUUAGUAU
(.((((((..(((((....[[[[.))))).(((((......................)))).....................................)....(((((....]]]].))))))))))).)
[ "URS0000D6D3FA_12908/1-130", "URS0000D6AE4F_12908/1-129" ]
[ "AAACUAAGAGGUGGAAAGUGACCUUCCAUACGCCUACGGUAUAGGAAACUAUACAAAGGGUGAUAGAAGCCCGUAACAGGUUAAGCUGACGAGGAUAAGAGAUUUCGGAAUUGGUCUCCGAACUUAGUAU", "AAACUAAGAGGUGGAAAGUGACCUUCCAUACGCCUACGGCAUAGGAAACUACGCAAGGGGUGAUAGAAGCCCGUAACAGGUUAAGCUGACGAGGAUAAGAGAUUUCGG-AUUGGUCUCCGAACUUAGUAU" ]
rfam_14_5_mafft
URS0000D6D40A_12908_1-181
CUGACUGCGUAUGCGGCUCUCCAUGAUCUCAGCCGUAUACAGCUUUAAAAAGGAGGAAAUGAACAUCCCCUGACUCGGGGUGCGGCAGUGUGGAGACCUGUCGCAAAGCGGUCCGUUCCCAAGGGGCGGCCGCGAGGGCACCUCAGGCGGAGGCCGGGUGUCCGGAGUCGGAAACAUGGCA
........((((((((((............))))))))))..........................(((([[[[[[))))((((((((.((....))))))))))..((((((.((.........))))))))..((((((((..(((....))))))))))).]]]]]]...........
[ "URS0000D6D40A_12908/1-181", "URS0000D677B4_12908/1-180", "URS0000D6B558_12908/1-181" ]
[ "CUGACUGCGUAUGCGGCUCUCCAUGAUCUCAGCCGUAUACAGCUUUAAAAAGGAGGAAAUGAACAUCCCCUGACUCGGGGUGCGGCAGUGUGGAGACCUGUCGCAAAGCGGUCCG-UUCCCAAGGGGCGGCCGCGAGGGCACCUCAGGCGGAGGCCGGGUGUCCGGAGUCGGAAACAUGGCA", "CUGACUGCGUAUACGGCUCUCCAU-UUCUAAGUCGUAUACAGCUUUAAUAAGGAGGAAGUGUUCAUCCCCAGGCUCGGGGUGCGGCAGUGUGGAGACCUGUCGUAAUGCGGCGCG-CUCUCUGCGGG...
rfam_14_5_mafft
URS0000D6D419_12908_1-53
GGGUGCGGGAAGUGAUUUCCCGCAGGAGCAUCGGACGGUCGGGCCGCCGUUCG
....(((((((.....)))))))........((((.(((......))).))))
[ "URS0000D6D419_12908/1-53", "URS0000D6CD39_12908/1-49" ]
[ "GGGUGCGGGAAGUGAUUUCCCGCAGGAGCAUCG-GACGGUCGGGCCGCCGUUCG", "GGGUGC----AGCGACGUCCGCUGCAGGCAUCGCGACGGUCGGGCCGCCGUCG-" ]
rfam_14_5_mafft
URS0000D6D41B_12908_1-179
UUCCGGGCGCUGCGUCUACUCCACAAACAUAGGCGCAGCUUCCGAAAAAAGGAGGAAAAAAAAGCCCGGCUCGGGCUGCGGCAGUGUGGAGACCUGCCGUAAUGCGGGACAUCCCAAAGCGGAUGGCCGCGAGGGCGUACCAAGCGAAGGCUGUACGUCCGGAGCAUGAAAAAAUGGCG
......(.((((((((((...........)))))))))).)......................((((.[[[[))))((((((((.((....))))))))))..((((..(((..........))).))))..((((((((..(((....))))))))))).]]]]..............
[ "URS0000D6D41B_12908/1-179", "URS0000D67983_12908/1-178" ]
[ "UUCCGGGCGCUGCGUCUACUCCACAAACAUAGGCGCAGCUUCCGAAAAAAGGAGGAAAAAAAAGCCCGGCUCGGGCUGCGGCAGUGUGGAGACCUGCCGUAAUGCGGGACAUCCCAAAGCGGAUGGCCGCGAGGGCGUACCAAGCGAAGGCUGUACGUCCGGAGCAUGAAAAAAUGGCG", "UUCCGGGCGCUGCGUCUACUCCACAAACAUAGGCGCAGCUUCCGAAAAAAGGAGG-AAAAAAAGCCCGGCUCGGGCUGCGGCAGUGUGGAGACCUGCCGUAAUGCGGGACAUCCCAAAGCGGAUGGCCGC...
rfam_14_5_mafft
URS0000D6D42B_12908_1-63
GCCCCGAACCCGACCUGUCCCCUUUGUGGGGUGCGUGCCGAAAGGCUAGGGUUCGGGGUUCGU
(((((((((((.......((((.....)))).....(((....)))..)))))))))))....
[ "URS0000D6D42B_12908/1-63", "URS0000D666AD_12908/1-63" ]
[ "GCCCCGAACCCGACCUGUCCCCUUUGUGGGGUGCGUGCCGAAAGGCUAGGGUUCGGGGUUCGU", "GCCCCGAACCCGAACUGUACCCCUUGUGGGUCGCGUGCCGAAAGGCUAGGGUUCGGGGCUCUU" ]
rfam_14_5_mafft
URS0000D6D440_12908_1-88
CCGAGUGAGGUGCCCAUGCGCCGUAGGCGCAUAUUAAAAUGGCACCGACGAACUGCCGCCGAACGGAAGUGAGGGGACGAUACCAUAA
........((((((.(((((((...)))))))........)))))).......((.(.((..((....))..)).).)).........
[ "URS0000D6D440_12908/1-88", "URS0000D6CA38_12908/1-87", "URS0000D6A492_12908/1-85", "URS0000D68A43_12908/1-85", "URS0000D6B1BB_12908/1-85" ]
[ "CCGAGUGAGGUGCC-CAUGCGCCGUAGGCGCAUAUUAAAAUGGCACCGACGAACUGCCGCCGAACGGAAGUGAGGGGACGAUACCAUAA", "-AAGAGGAGGUGCCAUGUGCCAUGUGGGCACAUAUC-GGAAUGCACCGACGAACUGCCGCCGACCGAAAGGGAGGGGGCGAUACAAGGA", "-CCGAGGAGGUGCC-CAUGUGUCGGAGACGCAUAUC-GCAUGGCACCAACGAACUGCCGCCGACC-CUAGGAAGGUGGCGAUACCAGAC", "-CCGAGGAGGUGCC-CAUGUGUCGGAGACG...
rfam_14_5_mafft
URS0000D6D44B_12908_1-84
GCUAUGAUGCCUAAGCCAGCCCGCGUUCGCGCCAUGACCCGGGCGGUGUACGUUAUUACGUGCAUGAAUAAUUAUCAGAAAUCU
..............(((.(((((.(((........))).))))))))((((((....)))))).....................
[ "URS0000D6D44B_12908/1-84", "URS0000D6B518_500639/1-84" ]
[ "GCUAUGAUGCCUAAGCCAGCCCGCGUUCGCGCCAUGACCCGGGCGGUGUACGUUAUUACGUGCAUGAAUAAUUAUCAGAAAUCU", "GCUAUGAUGCCGAAGCCAGCCUGCAUUUACCCAUCCAUGCAGGCGGUGUACGUCAUUACGUGCGUGAAUAAUUACCAGAAGUCU" ]
rfam_14_5_mafft
URS0000D6D455_12908_1-48
AGAUUGGUAGCUGCAACGAAGUGUUUCGCACACGGGCUUUCAACUACC
........((((........((((.....)))).))))..........
[ "URS0000D6D455_12908/1-48", "URS0000D65AFC_12908/1-48", "URS0000D66409_12908/1-48", "URS0000D6CECF_12908/1-48", "URS0000D69291_12908/1-48", "URS0000D6D18B_12908/1-48", "URS0000D6D18B_1263007/1-48", "URS0000D6AF79_12908/1-48", "URS0000D6B088_12908/1-48", "URS0000D6BA54_12908/1-48" ]
[ "AGAUUGGUAGCUGCAACGAAGUGUUUCGCACACGGGCUUUCAACUACC-", "AGAUUGGUAGCUGUAAGGAAGUGCUUCGAGCACGGGC-UGCAACUAUCA", "AGAUUGGUAGCUGCAAGGAAGUGCUUCGCGCACGGGC-UGAAACUAUCA", "AGAUUGGUAGCUGUAAGGAAGUGCUACGCGCACGGGC-UGAAACUAUCA", "AGAUUGGUAGCUGUAAGGAAGUGUUUCGCGCACGGGC-UGAAACUAUCA", "AGAUUGGUAGCUGUAAGGAAGUGCUUCGCGCACGGGC-UG...
rfam_14_5_mafft
URS0001A231E4_1121918_1-86
CGUUGUGAACUGUGGGGACCAUCUCCCCCUGCAGAUCCGGCAGCGGUCUUAACCGCAAUCUUAAAAUCUUAUUACCCAAGAAGGAG
..(((.((.((((((((.........)))))))).)))))..(((((....)))))..............................
[ "URS0001A231E4_1121918/1-86", "URS0001A2446D_12908/1-79" ]
[ "CGUUGUGAACUGUGGGGACCAUCUCCCCCUGCAGAUCCGGCAGCGGUCUUAACCGCAAUCUUAAAAUCUUAUUACCCAAGAAGGAG", "GGCUGAGAACUGUGGGGACAAUCUCCCCCUGUAGAUCCGGCCGCGGCUUAUGCCG-------AAAAACAUACACUUUAUGAAGGAG" ]
rfam_14_5_mafft
URS0001A231FA_12908_1-55
CCUGCGUGUGCAGGUCGGGAUGUGAGGCGGCGACCACGCCGCCUUGAACCACACA
(((((....)))))..((.....(((((............)))))...)).....
[ "URS0001A231FA_12908/1-55", "URS0001A239A9_662476/1-54", "URS0001A239A9_272569/1-54", "URS0001A243BA_1227452/1-54", "URS0001A23FC4_12908/1-54", "URS0001A2451C_662475/1-54", "URS0001A2451C_575195/1-54", "URS0001A2451C_1227453/1-54" ]
[ "CCUGCGUGUGCAGGUCGGGAUGUGAGGCGGCGACCACGCCGCCUUGAACCACACA", "CCUGCGUGUGCAGGUCGGGAUGUGAGUC-GCGCCGCGCGCGACUUGAACCACGCA", "CCUGCGUGUGCAGGUCGGGAUGUGAGUC-GCGCCGCGCGCGACUUGAACCACGCA", "CCUGCGUGUGCAGGUCGGGAUGUGAGUC-GCGUCGAGCGCGACUUGAACCACGCA", "CCUGCGUGUGCAGGCCGGGAUGUGAGUC-GCGCCGAGCGCGACUUGAACCACGCA", "CCUGCGUGUG...
rfam_14_5_mafft
URS0001A231FB_12908_1-64
UGUUAAAGAUAUGUUUUGGCUGUAGGGUCUAUUCUUAGGGAAACCUAAGGCAUAUCGAGGGAAA
.......((((((.(..((((....)))).)..((((((....)))))).))))))........
[ "URS0001A231FB_12908/1-64", "URS0001A231FF_12908/1-61", "URS0001A233EE_12908/1-62", "URS0001A2446E_12908/1-61" ]
[ "UGUUAAAGAUAUGUUUUGGCUGUAGGGUCUAUUCUUAGGGAAACCUAAGGCAUAUCGAGGGAAA", "CUGUAAAGAUAUGUUUGG-CUGUAGGGUCUAUUCUUAGGGAAACCUGAGGCAUAUCGAGGAA--", "CUGUAAAGAUAUGUUUGGUCUGUAGGGUCUAUUCUUAGGGAAACCUAAGGCAUAUCGAGGAA--", "CUGUAAAGAUAUGUUUGG-CUGUAGGGUCUAUUCUUAGGGAAACCUAAGGCAUAUCGAGGAA--" ]
rfam_14_5_mafft
URS0001A231FE_12908_1-69
UAUCUUUGCACGCUGAUUCACUUAAAACGAAUCGCAUACAUAAAAAUCAUUUAAAAUAAUAUUGGCAUG
.............((((((.........))))))...................................
[ "URS0001A231FE_12908/1-69", "URS0001A240EB_12908/1-59", "URS0001A2435B_12908/1-60", "URS0001A24AD0_12908/1-58", "URS0001A2367E_12908/1-59", "URS0001A23C39_12908/1-65", "URS0001A24B36_12908/1-65", "URS0001A249A7_12908/1-65", "URS0001A2477C_12908/1-67", "URS0001A24295_12908/1-56" ]
[ "UAUCUUUG-CACGCUGAUUCACUUAAAACGAAUCGCAUACAUAAAAAUCAUUUAAAAUAAUAUUGGCAUG", "UAUCUUUG-CAG----------CCGAUUUAAAAAUCGUACAUAACAAACAUUAAAAACAAUUUUGGCAUG", "UAUCUUUGCCAU---CGCUUUAAUUAGCGAA------UACAUAACAAUCAUUGAAA-UAAUAUUAGCAUG", "UAUCUUG--CAG---CGCUUUAAUUAGCCAA------UACAUAAUAAUCAUUGAAA-UAAUAUUUGCAUG", "UAUCUUUG-CA...
rfam_14_5_mafft
URS0001A23200_12908_1-67
GGGGACCUUUGGGGCCCUACACACCGGCGGUCUUAUUGAGACACGCUAAGCAAACGGAAGACAGAAA
((((.(((...))))))).......(((((((.......))).))))....................
[ "URS0001A23200_12908/1-67", "URS0001A23C61_12908/1-60", "URS0001A23FEB_12908/1-60" ]
[ "GGGGACCUUUGGGGCCCUACACACCGGCGGUCUUAUUGAGACACGCUAAGCAAACGGAAGACAGAAA", "GGGGACCUUCGGGGCCCUUAACCCGGGUCG------CAAGGCCCGAU-AGCUAACGGAAGACAGAGA", "GGGGACCUUCGGGGCCCUUAACCCGGGUCG------UAAGGCCCGAU-AGCUAACGGAAGACAGAGA" ]
rfam_14_5_mafft
URS0001A23212_12908_1-76
GAGGGCACGCUUAGAGCCCUCGUCGGGCGUGUUAAUAGCGACUGUCAUUUGGCCUGGACAGCGUGGUUAGAGAAUC
((((((.........))))))..........(((((.(((.(((((..........)))))))).)))))......
[ "URS0001A23212_12908/1-76", "URS0001A23B5C_12908/1-74" ]
[ "GAGGGCACGCUUAGAGCCC--UCGUCGGGCGUGUUAAUAGCGACUGUCAUUUGGCCUGGACAGCGUGGUUAGAGAAUC", "-GGGGCACGCUUAGAGCCCCACGCACAGCAGUGUUAAUAGCGGC--GCCUUUGGCC-GGACGUCGUGGUUAGUGAAUC" ]
rfam_14_5_mafft
URS0001A2321C_67855_1-56
CAUAUGGUGUCAGACAAAAUAGAUGCUCUGAUGGCGAUAUGGCUUCUAAAUGAGGU
(((((.((..(((((.........).))))...)).)))))...............
[ "URS0001A2321C_67855/1-56", "URS0001A2345E_505317/1-50" ]
[ "CAUAUGGUGUCAGACAAAAUAGAUGCUCUGAUGGCGAUAUGGCUUCUAAAUGAGGU", "CAUAUGGUGUCGGACUGGUU------UCCGAUAGCGAUAUGGCUUCAAUCCGAGGU" ]
rfam_14_5_mafft
URS0001A23237_12908_1-36
UAACCGCUGGCGGGACAAGGCUGCCCGUGAAUGUUG
((((...(.((((...........))))..).))))
[ "URS0001A23237_12908/1-36", "URS0001A23229_12908/1-35" ]
[ "UAACCGCUGGCGGGACAAGGCUGCCCGUGAAUGUUG", "UAACCGCUGGCAGGAC-GUGCAGCCUGCGAAUGUUG" ]
rfam_14_5_mafft
URS0001A23243_12908_1-31
CUAUGGCUUUAUUUUGUCAUGGCGAAGGGAG
(((((((........))))))).........
[ "URS0001A23243_12908/1-31", "URS0001A24ABC_12908/1-27" ]
[ "CUAUGGCUUUAUUUUGUCAUGGCGAAGGGAG", "CUAUGAC----UUUUGUCAUGGCGAAGGGAG" ]
rfam_14_5_mafft
URS0001A23244_12908_1-71
AAGACGAUAAAAGUCUUAGAACCUGCGUGUUAAUAGCUCUUUCAUUGGCCUGGAAGGGCGGUUAGGGAAUC
(((((.......)))))............(((((.(((((((((......))))))))).)))))......
[ "URS0001A23244_12908/1-71", "URS0001A242FA_12908/1-71", "URS0001A23630_12908/1-71" ]
[ "AAGACGAUAAAAGUCUUAGAACCUGCGUGUUAAUAGCUCUUUCAUUGGCCUGGAAGGGCGGUUAGGGAAUC", "AAGACGAUAAAAGUCUUAGAACCUGCGUGUUAAUAGCUCUUUCAUUGGCCUGAAAGGGUGGUUAGGGAAUC", "AAGACGAUAAAAGUCUUAGAACCUGCGUGUUAAUAGCUCUUUCAUUGGCCUGGAAGGGUGGUUAGGGAAUC" ]
rfam_14_5_mafft