id stringlengths 12 30 | sequence stringlengths 12 4.38k | secondary_structure stringlengths 12 4.38k | aligned_ids listlengths 1 10 | aligned_sequences listlengths 1 10 | split stringclasses 4
values |
|---|---|---|---|---|---|
URS0001A23261_1120953_1-52 | CGUAUGGUGGCCAGCUUCGGGCUGGUUAGCGAUGCGGCCUUGAUGAUGAGGU | (((((.((..((((((...))))))...)).)))))................ | [
"URS0001A23261_1120953/1-52",
"URS0001A23D70_1247024/1-51",
"URS0001A23845_388384/1-52",
"URS0001A23CB7_12908/1-52",
"URS0001A236A9_1115515/1-52",
"URS0001A23B35_12908/1-51",
"URS0001A23DF0_12908/1-52"
] | [
"CGUAUGGUGGCCAGCUUCGGG-CUGG-UUAGCGAUGCGGCCUUGAUGAUGAGGU",
"CGUAUGGUGUCUAGCGUUAGGGUUAG-AUAGCGAUGCGGCCUAAGUAGAGGU--",
"CGUAUGGUACCAGACUACGGGUUUGG-AGAGCGAUGCGGCCUUAACUAGAGGU-",
"CGUAUGGUGCCAGACUCCGGGUUUGG-AGAGCGAUGCGGCCUUAACUAGAGGU-",
"CGCAUGGUGUCCGGCGUUAGGGCUGGAAGAGCGAUGCGGCCUUAACUGAGGU--",
"CGUAUGGUGGCCAAC... | rfam_14_5_mafft |
URS0001A23269_12908_1-38 | GCGGUACCGGUUCCCGCCUGCGAGGCGACCCGGCGACU | ..(((.((((....(((((...)))))..))))..))) | [
"URS0001A23269_12908/1-38",
"URS0001A244B8_28264/1-37"
] | [
"GCGGUACCGGUUCCCGCCUGCGAGGCGACCCGGCGACU",
"UCUGUUCCGGUUCACCGCUCUGGCG-GACCCGGCGACC"
] | rfam_14_5_mafft |
URS0001A2326C_12908_1-35 | CUCUGGACCCGCACUGCGGUUCAGGGCGGAAAGAG | (((((((............)))))))......... | [
"URS0001A2326C_12908/1-35",
"URS0001A2396A_12908/1-34",
"URS0001A23F70_1590651/1-34",
"URS0001A2461F_12908/1-35",
"URS0001A23774_12908/1-34",
"URS0001A249D3_12908/1-34"
] | [
"CUCUGGACCCGCACUGCGGUUCAGGGCGGAAAGAG",
"CUCUGGUUCCACAUGA-GCUCCAGGGCGGAAAGAG",
"CUCUGGAUUCGCAAAG-AGUCCAGGGCGGAAAGAG",
"CUCUGGAACCGAAUGUUGUUCCAGGGCGGAAAGAG",
"CUCUGGAUUCGCAUGA-AGUCCAGGGCGGAAAGAG",
"CUCUGGUUCCACAUGA-GUUCCAGGGCGGAAAGAG"
] | rfam_14_5_mafft |
URS0001A23276_12908_1-68 | UAUCUUUGCACACGAAUUGAGAGAAUCUCGAUUCAUACAUAAUAAUCAUUAAAAAUAAUAUUGGAAUG | .............((((((.........)))))).................................. | [
"URS0001A23276_12908/1-68",
"URS0001A247FA_12908/1-54",
"URS0001A235B1_12908/1-54",
"URS0001A23B13_12908/1-61",
"URS0001A24411_12908/1-67",
"URS0001A23AA8_12908/1-56",
"URS0001A247F5_12908/1-65",
"URS0001A23879_12908/1-67",
"URS0001A2483A_12908/1-68",
"URS0001A23737_12908/1-55"
] | [
"UAUCUUUGCACACGAAUUGAGAGAAUCUCGAUUCAUACAUAAUAAUCAUUAAAAAUAAUAUUGGAAUG",
"UAUAUUUGC------------AGAAUUCAAAUUAAUACAUAAUAAUUAUU--AAAUAAUAUUGGAAUG",
"UAUAUUUGC------------AGAAUUCAAAUUAAUACAUAAUAAUUAUU--AAAUAAUAUUGGCAUG",
"UAUAUUUGCACCCGA------GAAAAAUUUUCUCGUACAUAAUAAUCAUU-GAAAUAAUAUUUGCAUG",
"UAGCUUUGCACACGAAUUG... | rfam_14_5_mafft |
URS0001A2329B_12908_1-67 | UACUUUUGCAGCCGUCUUACAAUAGCUGUGAGACAUACAUAAAAAUCAUUAAACAAAUAUUGGAAUG | .............((((((.........))))))................................. | [
"URS0001A2329B_12908/1-67",
"URS0001A23D51_12908/1-60",
"URS0001A2336A_12908/1-57",
"URS0001A2355B_12908/1-66",
"URS0001A23EDE_1492737/1-66",
"URS0001A2425F_12908/1-46",
"URS0001A24A60_12908/1-67",
"URS0001A231F0_1423323/1-67",
"URS0001A242F3_1423322/1-67",
"URS0001A23B62_12908/1-67"
] | [
"UACUUUUGCAGCCGUCUUACAAUAGCUGUGAGACAUACAUAAAAAUCAUUAAACA-AAUAUUGGAAUG",
"UACAUUUGCAGCC--------UUAAAUUUAAAACAUACAUAAUAAACAUUAAAAACAAUUUUAGCAUG",
"UAUAUUUGCACCG--------CUUAAUAAUAAGCAUACAUAA-AAUCAUUAAAU--AAUAUUAGCAUG",
"UACUUUUGC-CCGGUCUUAUAAUAGCUGUAAGACAUACAUAAAAAUCAUUAAACA-AAUAUUGGAAUG",
"UACUUUUGCACCCAUCUUG... | rfam_14_5_mafft |
URS0001A232AB_12908_1-91 | CUGAACGUGGCGUAAAGGGUGGACGUAAACCCCAGAUGGGUUAUGUGCCCAUUCCCUGCCAUCCCAAUGGCCAGGUGAACGCCCACAUCAG | ((((....(((((...((((...(((((............))))).))))..((.(((((((....)))))..)).)))))))....)))) | [
"URS0001A232AB_12908/1-91",
"URS0001A23668_12908/1-90",
"URS0001A2418D_12908/1-89"
] | [
"CUGAACGUGGCGUAAAGGGUGGACGUAAACCCCAGAUGGGUUAUGUGCCCAUUCCCUGCCAUCCCAAUGGCCAGGUGAACGCCCACAUCAG",
"CUGAACGUGGCGUAAAGGGUGGACGUAAA-CCCAGAUGGGUUAUGUGCCCAUUCCCUGCCAUCCCAAUGGCCAGGUGAACGCCCACAUCAG",
"CUGAACGUGGCGUAAAGGGU-GACGUAAA-CCCAGAUGGGUUAUGUGCCCAUUCCCUGCCAUCCCAAUGGCCAGGUGAACGCCCACAUCAG"
] | rfam_14_5_mafft |
URS0001A232B1_1045854_1-34 | CUCUGUUUCCAAGAUGGAUCAGGGCUAUAAGGAG | (((((..(((.....))).))))).......... | [
"URS0001A232B1_1045854/1-34",
"URS0001A23A2D_637971/1-33"
] | [
"CUCUGUUUCCA-AGAUGGAUCAGGGCUAUAAGGAG",
"CUCUGUUCCAGUAAAUGGAUCAGGGCAAAGGAG--"
] | rfam_14_5_mafft |
URS0001A232C1_12908_1-75 | GAGAGUGAACUUAGAACUCUCAGCACAUUGUGUGUUAAUAGCGUUACUUUUGGCCGGGUUACGUGGUUAGAGAAU | ((((((.........)))))).............(((((.((((.((((......)))).)))).)))))..... | [
"URS0001A232C1_12908/1-75",
"URS0001A23840_12908/1-75",
"URS0001A24024_12908/1-75"
] | [
"GAGAGUGAACUUAGAACUCUCAGCACAUUGUGUGUUAAUAGCGUUACUUUUGGCCGGGUUACGUGGUUAGAGAAU",
"GAGAGUGAACUUAGAACUCUCAGCACAUUGUGUGUUAAUAGCGUUGCUUUUGGCCGGGUUACGUGGUUAGAGAAU",
"GAGAGUGAACUUAGAACUCUCAGCACAUUGUAUGUUAAUAGCGUUACUUUUGGCCGGGUUACGUGGUUAGAGAAU"
] | rfam_14_5_mafft |
URS0001A232C6_12908_1-49 | CGGGAUAGUAUCCCGAAAGGAAUGUAGCUUAUCCAAGCUGAACCUUGAG | (((((.....)))))...((.....(((((....)))))...))..... | [
"URS0001A232C6_12908/1-49",
"URS0001A2401C_12908/1-49",
"URS0001A24481_12908/1-49"
] | [
"CGGGAUAGUAUCCCGAAAGGAAUGUAGCUUAUCCAAGCUGAACCUUGAG",
"CGGGAUCUAUCCCGUAAAGGAAUGUGGCUCAAAAGAGCUGAACCUGGAG",
"CGGGAUCUUUCCCGUAAAGGAAUGUGGCUCAUACGAGCUGAACCUGGAG"
] | rfam_14_5_mafft |
URS0001A232CD_12908_1-83 | GGCACUGCUCCGUGACAAACAGGUGCUGACUGAAGUAAGUCCGACGUGUUUCAAUGACACUGCCCUUGAGGCUUUGGGAUUAC | ((((((...............)))))).......((((..((...(((((.....))))).(((.....)))....)).)))) | [
"URS0001A232CD_12908/1-83",
"URS0001A242F7_1122230/1-75",
"URS0001A232AF_410358/1-74"
] | [
"GGCACUGCUCCGUGACAAACAGGUGCUGACUGAAGUAAGUCCGACGUGUUU-----CAAUGACACUGCCCUUGAGGCUUUGGGAUUAC",
"-------------AGCACUUAGGUGCUGACUGAAGUAAGUCCGACGUGUCUGUCUACUAAGACACUGCCUUUUUGGCUUUGGGAUUAC",
"-------------AGCACUUAGGUGCUGACUGAAGUAAGUCCGACGUGUCUGUCUACUAAGACACUGCC-UUAUGGCUUUGGGAUUAC"
] | rfam_14_5_mafft |
URS0001A232D1_1069082_1-67 | UCGGGAACAGCACGACCGCAAAUCUGACCCGCCACGCGGUUGCGUGGCUUCGAGAUUGCGGCCGUGU | .........((((..((((((..((.....(((((((....)))))))....)).))))))..)))) | [
"URS0001A232D1_1069082/1-67",
"URS0001A232D1_485914/1-67",
"URS0001A23228_12908/1-66",
"URS0001A24A2A_12908/1-67",
"URS0001A245F3_12908/1-66"
] | [
"-UCGGGAACAGCACGACCGCAAAUCUGACCCGCCACGCGGUUGCGUGGCUUCGAGAUUGCGGCCGUGU",
"-UCGGGAACAGCACGACCGCAAAUCUGACCCGCCACGCGGUUGCGUGGCUUCGAGAUUGCGGCCGUGU",
"-UCGGGAACAGCACGACCGCAAAUCUGACACGCUGUGGGUUUCCACAGCUU-GAGAUUGCGGCCGUGU",
"-ACGGGAACAGCACGACCGCAAAUCUGACUCGCCGUCCGUUUGGGCGGCUCCGAGAUUGCGGCCGUGU",
"AACGGGAAC-GCACGACCG... | rfam_14_5_mafft |
URS0001A232D9_12908_1-35 | CUCUGUUUCAGCAAAUGAUUCAGGGGCAAAAGGAG | (((((..(((.....)))..))))).......... | [
"URS0001A232D9_12908/1-35",
"URS0001A23F1A_12908/1-34",
"URS0001A23F1A_1051653/1-34",
"URS0001A23F1A_1423816/1-34",
"URS0001A23F1A_1203258/1-34",
"URS0001A23F1A_47715/1-34",
"URS0001A23F1A_1390383/1-34",
"URS0001A23F1A_1582/1-34",
"URS0001A2490B_797516/1-34",
"URS0001A23FE6_1423780/1-34"
] | [
"CUCUGUUUCAGCAAAUGAUUCAGGGGCAAAAGGAG",
"CUCUAGAUCAGGCAAUGAUUUA-GGGCAAAAGGAG",
"CUCUAGAUCAGGCAAUGAUUUA-GGGCAAAAGGAG",
"CUCUAGAUCAGGCAAUGAUUUA-GGGCAAAAGGAG",
"CUCUAGAUCAGGCAAUGAUUUA-GGGCAAAAGGAG",
"CUCUAGAUCAGGCAAUGAUUUA-GGGCAAAAGGAG",
"CUCUAGAUCAGGCAAUGAUUUA-GGGCAAAAGGAG",
"CUCUAGAUCAGGCAAUGAUUUA-GGGCA... | rfam_14_5_mafft |
URS0001A232E1_12908_1-50 | GCGGACGGUGAUGUCCGCUUGGGAUGUAGCCUUGAAGGCUGAACCGUUAA | (((((........)))))..((.....(((((...)))))...))..... | [
"URS0001A232E1_12908/1-50",
"URS0001A23A49_12908/1-46",
"URS0001A245E2_12908/1-48",
"URS0001A24272_12908/1-48",
"URS0001A23E02_12908/1-47",
"URS0001A2452B_12908/1-47",
"URS0001A23F2C_12908/1-46",
"URS0001A23A97_12908/1-47",
"URS0001A24AFD_12908/1-47",
"URS0001A2494D_12908/1-47"
] | [
"GCGGACGGUGAUGUCCGCUUGGGAUGUAGCCUUGAAGGCUGAACCGUUAA",
"GCGGAC--GAAAGUCCGC-AGGGAUGUGGCCGCA-AGGCUGAACCAUAAA",
"GCGGAC-UAACUGUCCGC-UGGGAUGUAGCCAUAUAGGCUGAACCGUAAA",
"GCGGAU-GUAAUGUCCGC-UGGGAUGUAGCCGUAUAGGCUGAACCAUAAA",
"GCGGAU--AAUUGUCCGC-UGGGAUGUAGCCGCAUAGGCUGAACCAUAAA",
"GCGGAU--AGGUGUCCGC-UGGGAUGUAGCCGUAU... | rfam_14_5_mafft |
URS0001A232E7_1121928_1-52 | CCGGUUCCGGUUCACACCCCGAGUCAGAGUUCUCGGCGGUGACCCGGCGACC | ..(((.((((....(((((((............))).))))..))))..))) | [
"URS0001A232E7_1121928/1-52",
"URS0001A23730_1223544/1-47",
"URS0001A23730_173559/1-47",
"URS0001A24811_247156/1-43",
"URS0001A249F4_526226/1-46",
"URS0001A23E7B_1027371/1-46",
"URS0001A23E7B_1220574/1-46",
"URS0001A23E7B_337191/1-46",
"URS0001A23E7B_1223543/1-46",
"URS0001A23E7B_1077975/1-46"
] | [
"CCGGUUCCGGUUCACACCCCGAGUCAGAGUUCUCGGCGGUGACCCGGCGACC",
"CCGGUUCCGGUUCACACCACUGAAAAA-----UCAGAGGUGACCCGGCGACC",
"CCGGUUCCGGUUCACACCACUGAAAAA-----UCAGAGGUGACCCGGCGACC",
"UCGGUUCCGGUUCACGUUCACG---------CCCGUGGGCGACCCGGCGACC",
"CCGGUUCCGGUUCACACCGUCGAGACA------CGACGGUGACCCGGCGACC",
"CCGGUUCCGGUUCACACCGUCGAGA... | rfam_14_5_mafft |
URS0001A2330E_12908_1-76 | GGGGGUAACCCUUAGAGCCCCCACCGCAAUCGUGUUAAUAGUCACGCUUUUGGCCGAGCUUGGCGGUUAGUGAAUC | ((((((..........))))))............(((((.((((.((((......)))).)))).)))))...... | [
"URS0001A2330E_12908/1-76",
"URS0001A249B3_12908/1-76",
"URS0001A23CC7_12908/1-76",
"URS0001A23CC7_619693/1-76",
"URS0001A24160_12908/1-76",
"URS0001A2357E_12908/1-76",
"URS0001A24706_12908/1-76"
] | [
"GGGGGUAACCCUUAGAGCCCCCACCGCAAUCGUGUUAAUAGUCACGCUUUUGGCCGAGCUUGGCGGUUAGUGAAUC",
"GGGGGUAAGCCUUAGAGCCUCCACCGCAAUCGUGUUAAUAGUCACGCUUUUGGCCGAGCUUGGCGGUUAGUGAAUC",
"GGGGGUAAACCUUAGAGCCUCCACCGCAAUCGUGUUAAUAGUCACGCUUUUGGCCGAGCUUGGCGGUUAGUGAAUC",
"GGGGGUAAACCUUAGAGCCUCCACCGCAAUCGUGUUAAUAGUCACGCUUUUGGCCGAGCUUGGCGGUUA... | rfam_14_5_mafft |
URS0001A23317_1604354_1-62 | CUCGUGGUGUUUGGAAACUCUUUAGAGUUGGUCCUUAUAGCGGCGAGGCUUCAAUUUGAGGU | (((((.((....(((................))).....)).)))))............... | [
"URS0001A23317_1604354/1-62",
"URS0001A232D6_221988/1-61"
] | [
"CUCGUGGUGUUUGGAAACUCUUUAGAGUUGGUCCUUAUAGCGGCGAGGCUUCAAUUUGAGGU",
"CUCGUGGUGUUUGGAAGCUC-UCAGAGCUGGUCCUUAUAGCGGCGAGGCUUCAUUUUGAGGU"
] | rfam_14_5_mafft |
URS0001A23323_12908_1-37 | AUUAAUAACCCGAGGUCGAGAACCUCAAUUAAUUAAU | ((((((.....(((((.....))))).....)))))) | [
"URS0001A23323_12908/1-37",
"URS0001A23711_12908/1-33",
"URS0001A240EE_1250006/1-34",
"URS0001A2466A_12908/1-35",
"URS0001A24350_1848903/1-36",
"URS0001A23FF3_12908/1-35",
"URS0001A249EA_12908/1-35",
"URS0001A2402C_12908/1-35",
"URS0001A23A63_12908/1-35",
"URS0001A23537_12908/1-35"
] | [
"AUUAAUAACCCGAGGUCGAGAACCUCAAUUAAUUAAU",
"-UUAAUAA-CCCGGGUCGAGUACCCAAAAUAUUGA--",
"-UUAAUAA-CAAAGGUCGAGAACCUUAAAAAAUUAA-",
"AUUAAUAA-CCUGGGUCGAGAACCCAAAAUAUUGAA-",
"AUUAAUAA-CUGAGGUCGAGAACCUCUAAAAAUUAAA",
"AUUAAUAA-CUGAGGUCGAGAACCUUAAAAUUUAAU-",
"AUUAAUAA-ACUAGGUCGAGAACCUAAAAAUUUAAU-",
"AUUAAUAA-CUUAG... | rfam_14_5_mafft |
URS0001A23338_1341155_1-69 | UACCUUUGCACCACGUUUUAGGAUAAACCUAUCGCGCUACAUAAUAAUCAUUUAAAGAAUAUUAGCAUG | .............((...(...........).))................................... | [
"URS0001A23338_1341155/1-69",
"URS0001A240DA_1341154/1-69",
"URS0001A23C8A_1121898/1-65",
"URS0001A241B5_1341181/1-69",
"URS0001A23CC4_1121912/1-67",
"URS0001A23429_1121895/1-66",
"URS0001A23981_12908/1-59",
"URS0001A2464D_1121899/1-65",
"URS0001A2439C_12908/1-67",
"URS0001A23DBE_1121891/1-67"
] | [
"UACCUUUGCACCACGUUUU-AGGAUAAACCUAUCGCGCUACAUAAUAAUCAUUUA-AAGAAUAUUAGCAUG",
"UACCUUUGCACCACGUUUU-AGGACAAACCUAUUGCGCUACAUAAUAAUCAUUUA-AAGGAUAUUAGCAUG",
"UAACUUUGCACC-CAAAUU-AGGAUAAACCUAAU---CUACAUAAUAAUUAUUUA-AAGAAUAUUAGCAUG",
"UAUUUUUGCGCCACGUUUU-AGGAUAGUCCUAUUUCGUUACAUAAUAAUCAUUUA-AAGAAUAUUUGCAUG",
"UAUCUUU... | rfam_14_5_mafft |
URS0001A2333C_12908_1-70 | CUGGUUCCGGUUCACGUCCUAGCCUGCGGGCCGCCCCGGCCACGCGCGAGGCGACGACGACCCGGCGACC | ..(((.((((....((((.(.(.............................).).))))..))))..))) | [
"URS0001A2333C_12908/1-70",
"URS0001A235A4_12908/1-37",
"URS0001A24482_12908/1-43",
"URS0001A23FA8_1169198/1-58",
"URS0001A23FA8_369723/1-58",
"URS0001A23917_12908/1-45",
"URS0001A233F1_875328/1-47",
"URS0001A244D2_1370120/1-47",
"URS0001A23551_12908/1-43",
"URS0001A244B1_1136425/1-57"
] | [
"CUGGUUCCGGUUCACGUCCUAGCCUGCGGGCC-GCCCCGGCCACGCGCGAGGCGACGACGACCCGGCGACC-",
"-CCGGUCCGGUUCACGU---------------------GCCCCGGCA-----------CGACCCGGCGCC--",
"CUGGCUCCGGUUCACGUCCCGCAUCCG--------------CGGA-------------CGACCCGGCGCU--",
"CCGGUUCCGGUUCACGCCCUGUCCGUGGUACACCCCGCGGCCGGG-------------CGACCCGGCGACC-",
"CCG... | rfam_14_5_mafft |
URS0001A23348_314256_1-81 | GGGGACCUUCGGGGCCCUUCAACUGCCGGGUCGACCAGCGCCACGCGCCGCGAGAUCCGCAAAGCAACGGAAAGACAGUAA | ((((.(((...)))))))......(.(((.(((.................)))...))))..................... | [
"URS0001A23348_314256/1-81",
"URS0001A23EC0_12908/1-67",
"URS0001A24009_12908/1-67",
"URS0001A23FB7_12908/1-68",
"URS0001A24743_1122180/1-64",
"URS0001A245EE_12908/1-66",
"URS0001A24195_12908/1-66"
] | [
"GGGGACCUUCGGGGCCCUUCAACUGCCGGGUCGACCAGCGCCACGCGCCGCGAGAUCCGCAAAGCAACGGAAAGACAGUAA-",
"GGGGACCUUCGGGGCCCUUCACCACAUAGGCCUU--------------UGACCAGGCCGCAAAGCAACGGAAAGACAGUAA-",
"GGGGACCUUCGGGGCCCUUGACACCAUAGGCCCA--------------UGACCGGGCCGCAAAGCAACGGAAAGUCAGUAA-",
"GGGGACCUUCGGGGCCCUUCAACUGGCCGGGCGG--------------GAC... | rfam_14_5_mafft |
URS0001A23353_12908_1-79 | GGCCACCUUUCAAAAGGGGGCUUGAACAUAGGCGGAGAUGCCCGAAGGGCCUUCGCCGUUAGCAAACGGAAGACAGAAA | ((((.(((.......)))))))........(((((....(((.....)))..)))))...................... | [
"URS0001A23353_12908/1-79",
"URS0001A23C2A_12908/1-74",
"URS0001A23E19_12908/1-66",
"URS0001A244E3_12908/1-69",
"URS0001A23217_12908/1-69",
"URS0001A239B6_12908/1-69",
"URS0001A23F3B_12908/1-69",
"URS0001A23AB8_12908/1-69",
"URS0001A246D4_12908/1-69",
"URS0001A2456B_12908/1-69"
] | [
"GGCCACCUUUCAAAAGGGGGCU-UGAACAUAGGCGGAGAUGCCCGAAGGGCCUUCGCCGUU--AGCA-AACGGAAGACAGAAA",
"GGCCACCUU----CGGGGGGCUGUCAACAUAGGAGAGCGCCGC---AAGGGCCUCUUCGUU--UGCUAAACGGAAGACAGAAA",
"GGCCACCUU----CGGGGGGCUGUAAACAUAGGCAGGC----------AAGACCUGCCGUU--AGCU-AACGGAAGACAGAAA",
"GGCCACCUU----CGGGGGGCU-UUACCAUCGGCAAGGGAUC------... | rfam_14_5_mafft |
URS0001A2335B_12908_1-67 | GGGCACCUAAGGGGGCCUAUAACCAAAGAGAACUUUUUCUCUUAAUAUAGCAAACGGAAGACAGCAA | ((((.(((...)))))))........(((((......)))))......................... | [
"URS0001A2335B_12908/1-67",
"URS0001A24668_12908/1-67"
] | [
"GGGCACCUAAGGGGGCCUAUAACCAAAGAGAACUUUUUCUCUUAAUAUAGCAAACGGAAGACAGCAA",
"GGGCACCUAAGGGGGCCUAUAACCAAAGAGAAGUUUUUCUCUUAAUAUAGCAAACGGAAGACAGCAA"
] | rfam_14_5_mafft |
URS0001A2335F_728_1-51 | CACUCGGUGCUAAAUUCAGUUUUAGAGAGCGGAGUGGCUUCAAAUUGAGGU | (((((.((.(((((......)))))...)).)))))............... | [
"URS0001A2335F_728/1-51",
"URS0001A24A9C_908285/1-51",
"URS0001A24A9C_1461579/1-51",
"URS0001A24A9C_1400001/1-51"
] | [
"CACUCGGUGCUAAAUUCAGUUUUAGAGAGCGGAGUGGCUUCAAAUUGAGGU",
"CACUCGGUGCCGAAUUCAGUUUCGGAAAGCGGAGUGGCUUCAGAUUGAGGU",
"CACUCGGUGCCGAAUUCAGUUUCGGAAAGCGGAGUGGCUUCAGAUUGAGGU",
"CACUCGGUGCCGAAUUCAGUUUCGGAAAGCGGAGUGGCUUCAGAUUGAGGU"
] | rfam_14_5_mafft |
URS0001A23370_12908_1-98 | AGAGAGCGUUGAUUUGAAAGGUUGCUGUGAUUUCUUAAUUAAAAGGAAUCAAAGGUUUUUUCAAGGAGCGAUGUCCAGUUCAUGAAAUGGGACGACAA | .............(((.((((...((.((....................)).))..)))).))).......((((..((((........)))))))). | [
"URS0001A23370_12908/1-98",
"URS0001A23E69_12908/1-94"
] | [
"AGAGAGCGUUGAUUUGAAAGGUUGCUGUGAUUUCUUAAUUAAAAGGAAUCAAAGGUUUUUUCAAGGAGCGAUGUCCAGUUCAUGAAAUGGGACGACAA",
"AGAGAGCGUUGAUUUGAAAGGUUGCUUUGAUUUC----UUAAAAGGAAUCAAAGGUUUUUUCAAGGAGCGAUGUCCAGUUCAUGAAAUGGGACGACAA"
] | rfam_14_5_mafft |
URS0001A2337A_12908_1-53 | GAAAGGCUGUAGUAUCUAGCAGCUGGGUACGUUAUGAUGUAUCCCAAUUUGAG | ....((((((........))))))((((((((....))))))))......... | [
"URS0001A2337A_12908/1-53",
"URS0001A23BFB_12908/1-52"
] | [
"GAAAGGCUGUAGUAUCUAGCAGCUGGGUACGUUAUGAUGUAUCCCAAUUUGAG",
"GAAAGGCUGUAGUAUCUAGCAGCUGGGUACGUUAUGAUGUACCCCAAUUUGA-"
] | rfam_14_5_mafft |
URS0001A23380_1300343_1-32 | GGUUUGCAAAGGAUUGACCUUAAUUUCUAACC | ((((.(.(((((.....))))....)).)))) | [
"URS0001A23380_1300343/1-32",
"URS0001A23380_313590/1-32"
] | [
"GGUUUGCAAAGGAUUGACCUUAAUUUCUAACC",
"GGUUUGCAAAGGAUUGACCUUAAUUUCUAACC"
] | rfam_14_5_mafft |
URS0001A23383_12908_1-39 | GACUGCUUUCAAAACAUCACCUCUCAGCAGUCGCGGCUG | (((((((..................)))))))....... | [
"URS0001A23383_12908/1-39",
"URS0001A235D0_12908/1-37",
"URS0001A243D5_12908/1-32",
"URS0001A23D20_12908/1-33",
"URS0001A2416D_12908/1-34"
] | [
"GACUGCUUUCAAAACAUCA--CCUCUCAGCAGUCGCGGCUG",
"GACUGC---CACAGCAUCUU-UCUCUCGGCAGUCGCGGCUG",
"GACUGC-------AUCUUU--CCUUUCUGCAGUCGCGGCUG",
"GAUUGC-------ACAUUAU-CCUCUCUGCAGUCGCGGCUG",
"GAUUGC-------ACAUUAUCCCUCUCUGCAGUCGCGGCUG"
] | rfam_14_5_mafft |
URS0001A2338A_12908_1-68 | UACCUUUGCGGUCCCUUUAGACGCUUAGCGUUGAAUGGCAUAACAAUCAUUGAAACAAUAUUGGAAUG | ................((.((.........)).))................................. | [
"URS0001A2338A_12908/1-68",
"URS0001A23862_12908/1-59",
"URS0001A23DB1_12908/1-57",
"URS0001A2339C_12908/1-56",
"URS0001A2359B_12908/1-56"
] | [
"--UACCUUUGCGGUCCCUUUAGACGCUUAGCGUUGAAUGGCAUAACAAUCAUU-GAAACAAUAUUGGAAUG",
"--UACCUUUGCAGCC----------CUGAAAAUCAGGAUACAUAACAAUCAUUAAAAACAAUAUUGAAAUG",
"UAUAUUUGCG-------------CCGCUGUUAACAGCAUACAUAAUAAUCA-UUUAAACAAUAUUGGAAUG",
"--UACCUUUGC------------CCCCGAUUUAAAAAAUACAUAAUAAUCA-UUUAAACAAUAUUGGAAUG",
"--UACCU... | rfam_14_5_mafft |
URS0001A2338B_1227490_1-92 | UUGGGAAUCGCACGGCCGCAAAUCUGACCCGUCGCGCCUCGCGUCCACCUCGGGCGUGAUCUAUCUCGCGCGACUCGAGAUUGCGGAAGUGC | .........((((..((((((..((.....(((((((..............................)))))))...)).))))))..)))) | [
"URS0001A2338B_1227490/1-92",
"URS0001A23592_12908/1-86",
"URS0001A23E99_12908/1-85"
] | [
"UUGGGAAUCGCACGGCCGCAAAUCUGACCCGUCGCGCCUCGCGUCCACCUCGGGCGUGAUCUAUCUCGCGCGACUCGAGAUUGCGGAAGUGC",
"CUGGGAAGCGCACGGCCGCAAAUCUGACCCGUCGU-CCAGACGGCGACCCCUGUCGCCGU-----CUGGACGACUCGAGAUUGCGGAAGUGC",
"CUGGGAAGCGCACGGCCGCAAAUCUGACUCGUCGU-CCACGCCAC-CCACUCGGUGUCGG-----UCGGGCGACUCGAGAUUGCGGAAGUGC"
] | rfam_14_5_mafft |
URS0001A233A9_12908_1-34 | CUCUGGAUUAGCAAAUAAUUCAGGGCAGGAGGAA | ((((((((.........))))))))......... | [
"URS0001A233A9_12908/1-34",
"URS0001A23490_626369/1-34",
"URS0001A23490_12908/1-34",
"URS0001A236ED_945021/1-33"
] | [
"CUCUGGAUUAGCAAAUAAUUCAGGGCAGGAGGAA",
"CUCUGGAUUAGGCAAUAAUUCAGGGCAGGAGGAA",
"CUCUGGAUUAGGCAAUAAUUCAGGGCAGGAGGAA",
"CUCUGAUUUAGCAAAUAAUUCAGGGCAAAGGAG-"
] | rfam_14_5_mafft |
URS0001A233BB_1336237_1-61 | CGUGUGGUGCCGUGCGGAUCCUGUAUCUGGUGCGGAGAGCGACGCGGACUUCUAUCGAGGU | (((((.((.((((((..............))))))...)).)))))............... | [
"URS0001A233BB_1336237/1-61",
"URS0001A23ED8_12908/1-60",
"URS0001A23CDE_66270/1-59",
"URS0001A23CDE_66269/1-59"
] | [
"CGUGUGGUGCCGUGCGGAUCCUGUAUCUGGUGCGGAGAGCGACGCGGACUUCUAUCGAGGU",
"CGUGUGGUGCUGCGCAGGUUCACGUCCUGGCGCGGAGAGCGACACGGCCUUAUAU-GAGGU",
"CGUGUGGUGCUGCGCAGGUUU-CGUCCUGGCGCGGAGAGCGACACGGCCUUCUAU-GAGGU",
"CGUGUGGUGCUGCGCAGGUUU-CGUCCUGGCGCGGAGAGCGACACGGCCUUCUAU-GAGGU"
] | rfam_14_5_mafft |
URS0001A233C3_12908_1-76 | GGGGACCUUCGGGGCCCUACAACCAUCUCGGCGCCAUCACCACGGGGCCGGGGACAAGCAAAACGGAAGACAGAGA | ((((.(((...)))))))........((((((.(..........).))))))........................ | [
"URS0001A233C3_12908/1-76",
"URS0001A2451F_12908/1-68",
"URS0001A234FF_12908/1-63",
"URS0001A23B66_759362/1-63",
"URS0001A23CBF_1402135/1-66",
"URS0001A23CBF_1380367/1-66",
"URS0001A24A84_12908/1-69",
"URS0001A23BAE_12908/1-68",
"URS0001A24AB4_12908/1-67",
"URS0001A23B63_12908/1-66"
] | [
"GGGGACCUUCGGGGCCCUACAACCAUCUCGGCGCCAUCACCACGGGGCCGGGGACAAGCAAAACGGAAGACAGAGA",
"UGGGACCUUCGGGGCCCUAUAACCAUGACGGUGCA-------CACUGCACCCGAUAAGCAAAACGGAAGACAUCA-",
"GGGGAUCUUCGGAGCCCUUCACCC---GAGACCCG-------CAAGG---GUCGCGAAGCAAACGGAAGACAGAGA",
"CGGGACCUUCGGGGCCCUUCAC-----GUGUCGGG-------CAUGACUGCCCGCAAAGCAAACGGAAG... | rfam_14_5_mafft |
URS0001A233DD_12908_1-47 | GCGGAUACGUCCGCGCGGGAUGUGGCCCUCUGAGGCUGAACCACAAA | (((((....)))))..((.....((((......))))...))..... | [
"URS0001A233DD_12908/1-47",
"URS0001A24AC1_12908/1-47",
"URS0001A23EA0_12908/1-47"
] | [
"GCGGAUACGUCCGCGCGGGAUGUGGCCCUCUGAGGCUGAACCACAAA",
"GCGGAUACGUCCGCAAGGGAUGUGGCCCGCAGGGGCUGAACCACAAA",
"GCGGAUGCGUCCGCACGGGAUGUGGCCCUUAGGGGCUGAACCACAAA"
] | rfam_14_5_mafft |
URS0001A233EB_136857_1-66 | ACUCAGGCACGAUCGUGGCCUCUGUUCACCACGCCGCGAACCGACCUGAUGUUCCAUCCUGAGGGA | ((.((((.....(((((((.............))))))).....))))..)).............. | [
"URS0001A233EB_136857/1-66",
"URS0001A24092_558173/1-62",
"URS0001A2384C_1401064/1-61",
"URS0001A23A83_156978/1-56",
"URS0001A241F3_156976/1-56",
"URS0001A24917_525263/1-64",
"URS0001A234EE_1224163/1-62"
] | [
"ACUCAGGCACGAUCGUGGCCUCUGUUCACCACGCCGCGAACCGACCUGAUGU-UCCAUCCUGAGGGA",
"ACUCAGGCACGAUCGCCGCACAUACCG-----CCGGCGAACCGACCUGAAGUAUCAAUCCUGAAGGG",
"ACUCAGGCACGAUCCGGUGAAAGCAU------UCCCGGAACCGACCUGAAGUAUCAAUCCUGAGGGA",
"ACUCAGGCACGAUCCCUUGAGA----------AAAGGGAACCGACCUGAAGU-UCAAUCCUGAGGGA",
"ACUCAGGCACGAUCGCCGAAAA-... | rfam_14_5_mafft |
URS0001A233EF_351672_1-56 | CGUGUGGUGUCUGGCAGCAAAACAAGGCUGGAUAGCGACACGGCCUGAACAGAGGU | (((((.((..(((((..........).))))...)).))))).............. | [
"URS0001A233EF_351672/1-56",
"URS0001A23DD0_12908/1-51",
"URS0001A24322_663321/1-55",
"URS0001A237C0_1283284/1-51",
"URS0001A237C0_595494/1-51",
"URS0001A23E9B_1268236/1-52",
"URS0001A238D0_600645/1-52",
"URS0001A238D0_12908/1-52",
"URS0001A238D0_440079/1-52",
"URS0001A23C45_104623/1-54"
] | [
"CGUGUGGUGUCUGGCAGCAAAACAAGGCUGGAUAGCGACACGGCC-UG-AACAGAGGU",
"CGUAUGGUGUUCGCGGA------GAGCGCGGAUGGCGAUACGGCCUGA-AACUGAGGU",
"CGUGUGGUGUCUGGCGG--GAUAAAGGCCCGAUAGCGACACGGUCUUA-AAGAGAGCU",
"CGUGUGGUGUCUGGCUU------CGGGUCAGAUGGCGACACGGCCUGA-AUCAGAGGU",
"CGUGUGGUGUCUGGCUU------CGGGUCAGAUGGCGACACGGCCUGA-AUCAGAGGU"... | rfam_14_5_mafft |
URS0001A23427_12908_1-58 | GAAAGGUCAUGCCUUUAGCAGCAUGGCUGGAUGCUUGCAUACCGGCAUCCCAGUUAGG | ....((((((((........))))))))(((((((........)))))))........ | [
"URS0001A23427_12908/1-58",
"URS0001A2415C_1123075/1-58",
"URS0001A24578_12908/1-56",
"URS0001A241E8_12908/1-53"
] | [
"GAAAGGUCAUGCCUUUAGCAGCAUGGCUGGAUGCU-UGCAUACCGGCAUCCCAGUUAGG",
"GAAAGGUCAUGCGUUUAGCGGCAUGGCUGGAUGCU-UGCAUACCGGCAUCCCAGUUAGG",
"GAAAGGUCAUGGUAAAAGAGACAUGACUGGAUG---CACAUACCGGCAUCCCAAUUAGG",
"GAAAGGUCAUG------GAGACAUGGCUGGAUGCUUCACAUACCGGCAUCCCAAUUAGG"
] | rfam_14_5_mafft |
URS0001A2342B_12908_1-33 | CUCUGAUUAAUCAAUUAAUCAGGGCCGAAGGAG | ((((((((........))))))))......... | [
"URS0001A2342B_12908/1-33",
"URS0001A24AC2_12908/1-32",
"URS0001A23377_12908/1-33",
"URS0001A241BA_12908/1-33",
"URS0001A24605_12908/1-33"
] | [
"CUCUGAUUAAUCAAUUAAUCAGGGCCGAAGGAG",
"CUCUGGUUAACCUA-CAAUCAGGGCCGAAGGAG",
"CUCUGAUUUAAAAAUUAAUCAGGGCCGAAGGAG",
"CUCUGAUUAAAGAAUUAAUCAGGGCCGAAGGAG",
"CUCUGAUUAAAUAAUUAAUCAGGGCCGAAGGAG"
] | rfam_14_5_mafft |
URS0001A23444_12908_1-77 | UAUAUUUGCAUCUUCAAUUUUUCCGAAAAUCGGAUUGAAUUGAAUACAUAAAAAUCAUUUAAAUAAAUAUUGGCAUG | .............((((((..................)))))).................................. | [
"URS0001A23444_12908/1-77",
"URS0001A23607_1034807/1-67",
"URS0001A24971_12908/1-66",
"URS0001A2451E_12908/1-66",
"URS0001A23AF2_12908/1-54",
"URS0001A24964_12908/1-69",
"URS0001A23D26_12908/1-69",
"URS0001A2324B_12908/1-55",
"URS0001A233BC_12908/1-55",
"URS0001A23E75_12908/1-55"
] | [
"UAUAUUUGCAUCUUCAAUUUUUCCGAAAAUCGGAUUGAAUUGAAUACAUAAAAAUCAUUUAAAUAAAUAUUGGCAUG",
"UAAAUUUGCACCGUCU---------UACAAAAGCUGUAAUGACAUACAUAAGAAUUAUU-AAAUAAAUAUUGGAAUG",
"UAUCUUUGCAGCUGC----------AAAGCAAAAUGCUAUGCAACACAUAAAAAUCAUUUAAAU-AAUAUUGGCAUG",
"UACUUUUGCAACCGAACCU---------GAAAAUCAGGAAUUCAUACAUAAAAAUCAUU--AAUAA... | rfam_14_5_mafft |
URS0001A23467_12908_1-62 | GAUUGCAACUUUUUUACCAUUCGCAAUAAAAAAGAUACCAUACCUCUCUGCAAUCGCGGCUG | (((((((.........................................)))))))....... | [
"URS0001A23467_12908/1-62",
"URS0001A23A5C_12908/1-37",
"URS0001A243AB_12908/1-39",
"URS0001A23FF7_12908/1-30",
"URS0001A231E8_12908/1-31",
"URS0001A23781_12908/1-31",
"URS0001A23599_12908/1-38",
"URS0001A23563_12908/1-33",
"URS0001A23DFA_1121485/1-33",
"URS0001A241AD_12908/1-29"
] | [
"GAUUGCAACUUUUUUACCAUUCGCAAUAAAAAAGAUACCAUACCUCUCUGCAAUCGCGGCUG",
"GAUUGCACACAUA-------------------------CCACCCUCUCUGCAAUCGCGGCUG",
"GAUUGCAAAU-----------------------AGACCUUAUCCUCUCUGUAAUCGCGGCUG",
"GAUUACAAA--------------------------------CCCUCUCUGUAAUCGCGGCUG",
"GAUUGCA-------------------------------UCAAU... | rfam_14_5_mafft |
URS0001A2346B_65497_1-72 | CCGGCUCCGGUUCACCCCCUCACCCGGCCCCUGGCGAGUGCCAGGCGACCAGGCAGGGCGGACCCGGCGGCC | ..(((.((((....((((((..................................)))).))..))))..))) | [
"URS0001A2346B_65497/1-72",
"URS0001A24A35_12908/1-60",
"URS0001A23A1B_1114962/1-71",
"URS0001A2348E_12908/1-54",
"URS0001A246BF_12908/1-62",
"URS0001A2461C_12908/1-47",
"URS0001A24B11_12908/1-49",
"URS0001A23ACF_365528/1-48",
"URS0001A23604_1856/1-45",
"URS0001A23604_326424/1-45"
] | [
"CCGGCUCCGGUUCACCCCCUCACCCGGCCCCUGGCGAGUGCCAGGC-GACCAGGCAGGGCGGACCCGGCGGCC",
"UUGGUUCCGGUUCACCUCAACCCGCUGGUCA-------------GCAGGAUCGGCGGCGAGGACCCGGCGGCC",
"ACGGCUCCGGUUCACCCCCUCGCCCGGCCCC--GGUAGCACCGGGCUGGCCAGGCAGGGCGGACCCGGCGGCC",
"UCGGCUCCGGUUCACGCUCGCCCGUCCGAU-------------------GCGGGUGCUGGCGACCCGGCGGCC",
... | rfam_14_5_mafft |
URS0001A23477_12908_1-86 | GCGGUACCGGUUCACGCCCCGCGUUAGCAGUGCUAGCCCAGGGGGACGACCCCCUGGACCCCCCGGCGCGGGACGACCCGGCGACC | ..(((.((((....((.(((((.............................................))))).))..))))..))) | [
"URS0001A23477_12908/1-86",
"URS0001A23F19_12908/1-56",
"URS0001A23927_1121926/1-43",
"URS0001A2322F_12908/1-43",
"URS0001A24933_12908/1-52",
"URS0001A24478_12908/1-54",
"URS0001A23FD6_12908/1-43",
"URS0001A23FD7_12908/1-43",
"URS0001A235AC_12908/1-86",
"URS0001A24AB8_12908/1-40"
] | [
"GCGGUACCGGUUCACGCCCCGCGUUAGCAGUGCUAGCCCAGGGGGACGACCCCCUGGACCCCCCGGCGCGGGACGACCCGGCGACC",
"GCGGUACCGGUUCACGUCCCGUGC------AGCUAGCGCAGCACGG------------------------UGGCGACCCGGCGACC",
"GCGGUACCGGUUCACG-------------------GCCCAGCAAUG------------------------CGCCGACCCGGCGACC",
"GCGGUUCCGGUUCACGCCUGC--------------A---... | rfam_14_5_mafft |
URS0001A23488_12908_1-95 | GAAAGGCUGCAGUGAAAUAUUCGCAGGUUCGGAAAGUGAUCGUCACACUUUGCCCACAGACUGCAGCUGGGCGUUACCGAGGCGCCUCAAUUAGG | ....((((((((................................................))))))))(((((((.....)))))))........ | [
"URS0001A23488_12908/1-95",
"URS0001A23E33_12908/1-60"
] | [
"GAAAGGCUGCAGUGAAAUAUUCGCAGGUUCGGAAAGUGAUCGUCACACUUUGCCCACAGACUGCAGCUGGGCGUUACCGAGGCGCCUCAAUUAGG",
"GAAAGGCCGC----GUACAUUCGCCG-------------UCGUC------------------GCGGCUGGGUGUUACCGAGGCACCCCAAUUAGG"
] | rfam_14_5_mafft |
URS0001A23489_12908_1-77 | UGGGGAGAGACUUAGAAUCCCCACGGGUUGAUGUGUGAAUAGCUGUGUCUUUGGCCGGGCGCGGUGGUUCGAGAAUC | ((((((...........))))))............(((((.(((((((((......))))))))).)))))...... | [
"URS0001A23489_12908/1-77",
"URS0001A23809_12908/1-75",
"URS0001A23483_12908/1-75",
"URS0001A236E5_12908/1-75",
"URS0001A240E3_12908/1-77",
"URS0001A2370E_12908/1-76",
"URS0001A23D89_12908/1-75",
"URS0001A237FD_12908/1-77",
"URS0001A24360_12908/1-76",
"URS0001A23875_1410614/1-76"
] | [
"UGGGGAGAGACUUAGAAUCCCCACGGGUU-GAUGUGUGAAUAGCU-GUGUCUUUGGCCGGGCGCGGUGGUUCGAGAAUC",
"--GGGAGGUUCUUAGAAUCCCCGCGGGU--GACGUGUAAAUAGCGUUUGUCUUUGGCCGGACUACGUGGUUUGUGAAUC",
"UGGGGGAAGUCUUAGAA-CCCCAUGGAU--GCCGUGUUAAUAGCU-GUGCCUUUGGCCGGGCAUGGCGGUUAGUGAAUC",
"-GGGGAUACGCUUAGAGUCCCCAGUACA--GGAGUGUUAAUAGCU-GUGUCUUUGGCCGG... | rfam_14_5_mafft |
URS0001A2348B_1122978_1-79 | GAAGGUCUACGCUUAGAAGCCUUCGCGCAGAGCCGUGUUAAUAGUACUUCUUCUGGCCGAGAAGUGCGGUUAGUGAAUC | ((((((............)))))).............(((((.(((((((((......))))))))).)))))...... | [
"URS0001A2348B_1122978/1-79",
"URS0001A23F3C_12908/1-77",
"URS0001A23EF5_12908/1-77"
] | [
"GAAGGUCUACGCUUAGAAGCCUUCGCGCAGAG-CCGUGUUAAUAGUACUUCUUCUGGCCGAGAAGUGCGGUUAGUGAAUC",
"GGAGGUUAAC---UUAGGACCUCCGCGUACAGUUCGUGUUAAUAGUCACAUCUUUGGCCAGGUGUGACGGUUAGUGAAUC",
"GGAGGUUAAC---UUAGGACCUCCGCGUACAGUUCGUGUUAAUAGUCAUAUCUUUGGCCAGGUGUGACGGUUAGUGAAUC"
] | rfam_14_5_mafft |
URS0001A2348D_12908_1-69 | UAUAUUUGGCCCCUUAAUUGCGAUAAACGCUAUUAACCGCAUAAAAAUUAUUUAAAUAAUAUUGGAAUG | .............(((((.............)))))................................. | [
"URS0001A2348D_12908/1-69",
"URS0001A23254_12908/1-67",
"URS0001A2332A_12908/1-52",
"URS0001A23E58_12908/1-69",
"URS0001A23AD1_12908/1-68",
"URS0001A246CE_12908/1-68",
"URS0001A2458C_12908/1-67",
"URS0001A24177_12908/1-68",
"URS0001A23D25_12908/1-68",
"URS0001A23A8F_12908/1-68"
] | [
"UAUAUUUGGCCCCUUAAUUGCGAUAAACGCUAUUAACCGCAUAAAAAUUAUUUAAA-UAAUAUUGGAAUG",
"UAUAUUUGCCACUU-GAUUGU--UUCAAAAAAUUGAUUACAUAAAAAUUAUUUAAAGAAAUAUUGGAAUG",
"UAUAUUUGC------------------GGGUAUAAAAUGCAUAAAAAUUAUUAAAAUUAAUAUUGGCAUG",
"UAUAUUUGGCGUCUGAAUUGCGAUAAACGUAAUCAAACGCAUAAAAAUUAUUUAAA-UAAUAUUGGAAUG",
"UAUAUUUGCCC... | rfam_14_5_mafft |
URS0001A23495_444103_1-58 | CCGGGGGGCGCGACGCCCCCCGGACCCCGAUCACCGGUACCUGACACGGCCGGUGCGG | (((((((((.....)))))))))...(((..(((((((..........)))))))))) | [
"URS0001A23495_444103/1-58",
"URS0001A24556_1298879/1-58",
"URS0001A23E14_1169161/1-58",
"URS0001A24805_1137269/1-57"
] | [
"CCGGGGGGCGCGACGCCCCCCGGACCCCGAUCACCGGUACCUGACACGGCCGGUGCGG",
"CCGGGGGGCGCCUCGCCCCCCGGACCCCGAUCACCGGUACCUGAUACGGCCGGUGCGG",
"CCGGGGGGCGCUGCGCCCCCCGGACCCCGAUCACCGGUACCUGACACGGCCGGUGCGG",
"UCGGGGGGC-CACCGCCCCCCGAACCCCGAUCACCGGUACCUGACACGGCCGGUGCGG"
] | rfam_14_5_mafft |
URS0001A23499_478749_1-90 | GAAAGGUCGUCAGUAUUGCCGUUUGCUUAUCAGACGGCAGUCAUUUUUUGCGGCUGGGUGGUGGAAAAGAUUUCCAAAACCCCAAUUAAA | ....((((((.(...................................).))))))((((...................))))........ | [
"URS0001A23499_478749/1-90",
"URS0001A24946_12908/1-54"
] | [
"GAAAGGUCGUCAGUAUUGCCGUUUGCUUAUCAGACGGCAGUCAUUUUUUGCGGCUGGGUGGUGGAAAAGAUUUCCAAAACCCCAAUUAAA",
"GAAAGGUCG----------------------------------UAUUUCGCGGCUGGGUGCUGGAACAA--UUCCAGAACCCCAAUUAAA"
] | rfam_14_5_mafft |
URS0001A234A4_324925_1-78 | UUGCAGAUGGUGUUCACAGGGAAACCUUUGAAGCCGUGGGGCUGGUCUGCGCAAUGCCAGACCCUCGCCAUAUUGCAA | ((((((((((((((((.((......)).)))).....((((((((...........)))).)))))))))).)))))) | [
"URS0001A234A4_324925/1-78",
"URS0001A239FD_12908/1-77",
"URS0001A23E4F_377431/1-77",
"URS0001A24369_12908/1-78"
] | [
"UUGCAGAUGGUGUUCACAGGGAAACCUUUGAAGCCGUGGGGCUGGUCUGCGCAAUGCCAGACCCUCGCCAUAUUGCAA",
"UUGCAGAUGGUGUUCCCCUUUAAUGG-UUGAAGCCGUGGGGCUGAUUAGCGCAAUGUCAGACCCUCACCAUAUUGCAA",
"UUGCAGAUGGUGUUCAACGGGAAACC-GUGAAGCCGUGGGGCUGGUCUGCGCAAUACCGGACCCUCGCCGUUUUGCAA",
"UUGCAGAUGGUGUUCACAGGGAGACCUUUGAAGCCGUGGGGCUGGUCUGCGCAAUACCGGACC... | rfam_14_5_mafft |
URS0001A234B0_12908_1-54 | ACGGGAUGCGUCCCGUCAAGGAAUGUGGCCCGGUCUUCCGGGCUGAACCUGAAA | (((((......)))))...((.....(((((........)))))...))..... | [
"URS0001A234B0_12908/1-54",
"URS0001A234B0_882090/1-54",
"URS0001A24AD8_12908/1-50",
"URS0001A2368B_12908/1-52",
"URS0001A2441C_12908/1-51",
"URS0001A235C4_12908/1-51",
"URS0001A231BC_12908/1-51",
"URS0001A23742_12908/1-53",
"URS0001A24203_12908/1-51",
"URS0001A2415E_12908/1-53"
] | [
"ACGGGAUGCGUCCCGUC-AAGGAAUGUGGCCCGGUCUUC-CGGGCUGAACCUGAAA",
"ACGGGAUGCGUCCCGUC-AAGGAAUGUGGCCCGGUCUUC-CGGGCUGAACCUGAAA",
"-CGGGAUCCGUCCCGUG-AAGGAAUGUGGCGUC--UCU--GACGCUGAACCUGAUG",
"-CGGGAUCCGUCCCGUG-AAGGAAUGUGGCGUU--UUUCAGACGCUGAACCUGAGG",
"-CGGGAUCCGUCCCGUGCAAGGAAUGUGGCGGU--UCA--UCCGCUGAACCUCAGG",
"-CGGG... | rfam_14_5_mafft |
URS0001A234C2_12908_1-84 | CCGGCUCCGGUUCACGUCCUGUCCCGCGACACCACCGCACCCGUCGGUGGCGCGCGGGAGUCCCACCAGGGCGACCCGGCGGCC | ..(((.((((....(((((((.............................................)))))))..))))..))) | [
"URS0001A234C2_12908/1-84",
"URS0001A2422C_1172181/1-48",
"URS0001A23A5F_12908/1-39",
"URS0001A23D99_106370/1-46",
"URS0001A23C40_12908/1-82",
"URS0001A23523_1170698/1-46",
"URS0001A23523_1114961/1-46",
"URS0001A23523_713612/1-46",
"URS0001A242D5_1089546/1-45",
"URS0001A2358C_882856/1-42"
] | [
"CCGGCUCCGGUUCACGUCCUGUCCCGCGACACCACCGCACCCGUCGGUGGCGCGCGGGAGUCCCACCAGGGCGACCCGGCGGCC",
"UCGGCUCCGGUUCACGUUGG--------------------UCG---------------UAUCCCGCGACAACGACCCGGCGCC-",
"CCGGCUCCGGUUCACGU---------------------------------------------GCGCGAGCACGACCCGGCGGCC",
"CCGGCUCCGGUUCACGUCGU-------------------------... | rfam_14_5_mafft |
URS0001A234CA_12908_1-80 | CUGACCGUGACGCAUGGGUGGACGUUUCCAUAAAAAACGAGCCUGUUCCCCGGAAUUACCCGGGGAUGCGUCAAUGUCAG | (((((...(((((..((((...(((((.......))))).))))..(((((((......))))))).)))))...))))) | [
"URS0001A234CA_12908/1-80",
"URS0001A24B13_12908/1-80",
"URS0001A23664_12908/1-79",
"URS0001A2477A_12908/1-80",
"URS0001A23A35_12908/1-79",
"URS0001A24ADE_456442/1-76"
] | [
"CUGACCGUGACGCAUGGGUGGACGUUUCCAU-AAAAAACGAGCCUGUUCCCCGGAAUUACCCGGGGAUGCGUCAAUGUCAG",
"CUGACCGUGACGCAUGGGUGGACGUUUUCAUAAAAAAACGAGCCUGUUCCCCGGAA-UACCCGGGGAUGCGUCAAUGUCAG",
"CUGACCGUGACGCAUGGGUGGACGUUUUCAU-AAAAAACGAGCCUGUUCCCCGGAA-UACCCGGGGAUGCGUCAAUGUCAG",
"CUGACCGUGACGCACGGGUGGACGUUUCCAA-GAGAAACGAGCCUGUUCCCCGG... | rfam_14_5_mafft |
URS0001A234CF_12908_1-104 | CUCGCCGCCGGACCGAGGCGUCGGGUCGACGCGGAGUCAACCCCGUCGACGCCGAGGGUCCGGGACGAGACGAAAUGUGGCCGCAUGCGCGGCUGAAUCGCAAC | ((((.............................................................))))..((.....(((((......)))))...))..... | [
"URS0001A234CF_12908/1-104",
"URS0001A23F9A_12908/1-51",
"URS0001A2327D_12908/1-93",
"URS0001A24068_12908/1-95",
"URS0001A243D1_12908/1-97",
"URS0001A23C0D_12908/1-95",
"URS0001A23D7F_12908/1-95",
"URS0001A2355F_12908/1-101",
"URS0001A232EE_1227466/1-82",
"URS0001A233B1_1194088/1-83"
] | [
"CUCGCCGCCGGACCGAGGCGUCGGGUCGA-CGCGGAGUCAACCCCGUCGACGCCGAGGGUCCGGGACGAGACGAAAUGUGGCCGCAUGCGCGGCUGAAUCGCAAC",
"---------------------------------------------------CCCG--AACACCGUUCGGGACGAAAUGUGGCGGUAU-AUCCGCUGAAUCGCAAG",
"CUCGCCGCCGGAGCCGGGUCGCGA------CGCGGAGGUCGCUCCGCUCGCUCC---CGCCCGGGACGAGACGAAAUGUGGCCCUUC---GGG... | rfam_14_5_mafft |
URS0001A234D1_12908_1-100 | CUGAUGACCGCGUCCGGGUCAAUUGUGAACUGCAACACCCAAUUUCUCUCCAUGUACCAGACUCGAUGUCUGUGCGAGAAGGGACACGCGUUGCCAUCAG | (((((...(((((..((((...(((((...))))).))))..((((((((.........................))).))))).))))).....))))) | [
"URS0001A234D1_12908/1-100",
"URS0001A23D11_768065/1-100",
"URS0001A23D11_12908/1-100",
"URS0001A2388F_12908/1-100"
] | [
"CUGAUGACCGCGUCCGGGUCAAUUGUGAACUGCAACACCCAAUUUCUCUCCAUGUACCAGACUCGAUGUCUGUGCGAGAAGGGACACGCGUUGCCAUCAG",
"CUGAUGACCGCGUUCGGGUCAAUUGUGAAUUGCAACACCCGGUCUCUCUCCAUGUGCCAGAAUCGGUAUCUGUACGAGAGGGGACACGCGUUGCUAUCAG",
"CUGAUGACCGCGUUCGGGUCAAUUGUGAAUUGCAACACCCGGUCUCUCUCCAUGUGCCAGAAUCGGUAUCUGUACGAGAGGGGACACGCGUUGCUAUCAG",
... | rfam_14_5_mafft |
URS0001A234D6_12908_1-30 | UAACCUCUGACGAAGAAAUCGUGAAUGUUG | ((((...(.((((.....))))..).)))) | [
"URS0001A234D6_12908/1-30",
"URS0001A244A0_12908/1-25",
"URS0001A2360E_12908/1-28",
"URS0001A23D72_12908/1-28",
"URS0001A23CCF_12908/1-28",
"URS0001A236D9_1500290/1-28",
"URS0001A236D9_1674291/1-28",
"URS0001A236D9_1500286/1-28",
"URS0001A236D9_491205/1-28",
"URS0001A236D9_12908/1-28"
] | [
"UAACCUCUGACGAAGAAAUCGUGAAUGUUG",
"UAACCUCUGAUG-----UAUAUGUAUGUUA",
"GAACCUCUGACGAUC--AUCGUGAAUGUCC",
"CAACCUCUGACGAAA--CGCGUGUAUGUUG",
"CAACCUCUGACGAAG--UCCGUGCAUGUUG",
"CAACCUCUGACGAAG--UCCGUGUAAGUUG",
"CAACCUCUGACGAAG--UCCGUGUAAGUUG",
"CAACCUCUGACGAAG--UCCGUGUAAGUUG",
"CAACCUCUGACGAAG--UCCGUGUAAG... | rfam_14_5_mafft |
URS0001A234F2_12908_1-117 | CCUGUUUCAGCACAGGUCGGGAUGUGAACCGGGAGGGUGAGAUCGAAGAUCUCGCAGCCCUCCACGAGAUUUCCAAUCUCGCCGGGGCCUUCGACCCCGCAUGGUUUGAACCACGCA | (((((......)))))..((.....(((((........................................................................)))))...))..... | [
"URS0001A234F2_12908/1-117",
"URS0001A23437_12908/1-85"
] | [
"CCUGUUUCAGCACAGGUCGGGAUGUGAACCGGGAGGGUGAGAUCGAAGAUCUCGCAGCCCUCCACGAGAUUUCCAAUCUCGCCGGGGCCUUCGACCCCGCAUGGUUUGAACCACGCA",
"CCUGUCACAGAACAGGUCGGGAUGUGAACC------GCGAGGUCGAAGAUCUCGC---------CGAGAUUGGAAAUCUCGC-----------------UACGGUUUGAACCACGCA"
] | rfam_14_5_mafft |
URS0001A234FB_1123488_1-45 | CCGGUUCCGGUUCACCUUAUGUAACCUGCAUUUGGACCCGGCGCC | ..(((.((((....((..((((.....))))..))..)))).))) | [
"URS0001A234FB_1123488/1-45",
"URS0001A2474B_12908/1-39",
"URS0001A243C0_1089544/1-38"
] | [
"CCGGUUCCGGUUCACCUUAUGUAACCUGCAU-UUGGACCCGGCGCC",
"CGGGCUCCGGUUCACCUCGCA------ACGC-GGGGACCCGGCGCC",
"CCGGCACCGGUUCACC--------CCUGCACAGGGGACCCGGGGCC"
] | rfam_14_5_mafft |
URS0001A23507_12908_1-63 | CAUGCGGUGUCAGGGAUUGCUUUCGCAAUUGGCUUGAUAGCGGCAUGGCUUCAAAUUUGAGGU | (((((.((..((((..................))))...)).)))))................ | [
"URS0001A23507_12908/1-63",
"URS0001A24908_12908/1-63",
"URS0001A23D22_12908/1-63",
"URS0001A23D22_1321772/1-63",
"URS0001A24620_12908/1-63",
"URS0001A245C0_12908/1-63",
"URS0001A24B19_12908/1-63",
"URS0001A23BDF_12908/1-63",
"URS0001A2439B_12908/1-63",
"URS0001A23624_12908/1-63"
] | [
"CAUGCGGUGUCAGGGAUUGCUUUCGCAAUUGGCUUGAUAGCGGCAUGGCUUCAAAUUUGAGGU",
"CAUGCGGUGUCAGGGAUUGCUUUUGCGAUUGGCUUGAUAGCGGCAUGGCUUCAACUUUGAGGU",
"CAUGCGGUGUCAGGGAUUGCGUUUGCGAUUGGCUUGAUAGCGGCAUGGCUUCAACUUUGAGGU",
"CAUGCGGUGUCAGGGAUUGCGUUUGCGAUUGGCUUGAUAGCGGCAUGGCUUCAACUUUGAGGU",
"CAUGCGGUGUCAGGGAUUGCGUUUGCGAUUGGCUUGAUA... | rfam_14_5_mafft |
URS0001A23508_12908_1-52 | CGGGAUGCGUCCCGUGAAGGAAUGUGGCGUGGCAACACGCUUGAACCUGGAU | (((((....)))))....((.....(((((......)))))....))..... | [
"URS0001A23508_12908/1-52",
"URS0001A23585_28892/1-52",
"URS0001A23443_12908/1-47",
"URS0001A236F3_12908/1-46"
] | [
"CGGGAUGCGUCCCGUGAAGGAAUGUGGCGUGGCAACACGCUUGAACCUGGAU",
"CGGGAUCAGUCCCGUGAAGGAAUGUGGCGCGAAACCAGCGCUGAACCUGAAG",
"CGGGAUACGUCCCGGGAAGGAAUGUGGCGGAAA-----CGCUGAACCUGAGG",
"CGGGAUACGUCCC-UGAAGGAAUGUGGCGGAAA-----CGCUGAACCUGAGG"
] | rfam_14_5_mafft |
URS0001A2350A_12908_1-74 | UGUGGCUCAUUUGCAACCACACUCGCGUGUUAAUAGCCGGGUUUCAUUGGCCGAAACACGGUGGUUAGUGAAUC | (((((...........)))))........(((((.((((.((((.........)))).)))).)))))...... | [
"URS0001A2350A_12908/1-74",
"URS0001A23796_12908/1-74",
"URS0001A24A50_12908/1-74",
"URS0001A2347A_12908/1-72",
"URS0001A23C6A_12908/1-73",
"URS0001A23C85_12908/1-73",
"URS0001A23A5A_12908/1-73"
] | [
"UGUGGCUCAUUUGCAACCACACUCGCGUGUUAAUAGCCGGGUUUCAUUGGCCGAAACACGGUGGUUAGUGAAUC",
"UGUGGCUCAUUUGCAGCCACACUCGCGUGUUAAUAGCCGGGUUUCAUUGGCCGAAACACGGUGGUUAGUGAAUC",
"UGUGGCUCAUUUGCAGCCACACUCGCGUGUUAAUAGCCGGGUUUCAUUGGCCGAAAAACGGUGGUUAGUGAAUC",
"-GUGCCUCAAAAGAGU-CACGGCCGCGUGUUAAUAGCCGAGUUUCAUUGGCCGAAAAUCGGUGGUUAGUGAAUC"... | rfam_14_5_mafft |
URS0001A2350B_12908_1-58 | GGUGGAGCCCGUGCCGGUCUCCAUCCUUCCCACCCGGUACCUCAUACGGCCGGAGUGG | (((((((.(.......).)))))))....(((.(((((..........)))))..))) | [
"URS0001A2350B_12908/1-58",
"URS0001A24090_246197/1-56",
"URS0001A247C5_1242864/1-58",
"URS0001A2459B_1406225/1-57",
"URS0001A2459B_48/1-57",
"URS0001A23C9D_12908/1-57",
"URS0001A231E5_378806/1-57",
"URS0001A232DF_1334629/1-57",
"URS0001A232D0_1278073/1-57",
"URS0001A23CC3_1297742/1-57"
] | [
"GGUGGAGCCCGUGCCGGUCUCCAUCCUUCCCACCCGGUACCUCAUACGGCCGGAGUGG",
"-GCGGGCCUCGUGCCGGG-UCCGCCCAUCCCACCCGGUACCUGAUACGGCCGGAGUGG",
"GGUGGAGCCCGUGCCGGCCUCCAUCCUUUCCACCCGGUACCUCGUACGGCCGGAGUGG",
"GGUGGAGCCCGUGCCGGU-UCCAUCCUUCCCACCCGGUACCUCGUACGGCCGGAGUGG",
"GGUGGAGCCCGUGCCGGU-UCCAUCCUUCCCACCCGGUACCUCGUACGGCCGGAGUGG"... | rfam_14_5_mafft |
URS0001A23517_12908_1-77 | GGGGGAGAGACUUAGAAUCCCCCGUGGACCUUGUGUAAAUAGUAGUGUCUUUGGCCGGGCAUUGCGGUUUGUGAAUC | ((((((...........))))))............(((((.(((((((((......))))))))).)))))...... | [
"URS0001A23517_12908/1-77",
"URS0001A248BB_12908/1-76",
"URS0001A23C75_12908/1-75",
"URS0001A23B47_12908/1-75",
"URS0001A24221_12908/1-76",
"URS0001A23D75_12908/1-75",
"URS0001A2401E_12908/1-75",
"URS0001A231F3_12908/1-77",
"URS0001A237D3_12908/1-76",
"URS0001A24A42_1408472/1-76"
] | [
"GGGGGAGAGACUUAGAAUCCCCCGUGGACCUU-GUGUAAAUAGUAG-UGUCUUUGGCCGGGCAUUGCGGUUUGUGAAUC",
"-GGGGAGAGACUUAGAAUCCCCUUCGGGCAUU-GUGUAAAUAGCGC-CGCCUUUGGCCAGACGUCGCGGUUUGAGAAUC",
"-GGGGAGAGUCUUAGAAUCC-CCGCCGGUCCC-GUGUAAAUAGUCG-UGCCUUUGGCCGGACAUGACGGUUUGUGAAUC",
"-GGGGAGAGUCUUAGAAUCC-CCGCCGGUCCC-GUGUAAAUAGUCG-UGCCUUUGGCCGG... | rfam_14_5_mafft |
URS0001A23531_137591_1-33 | CUCUGGUUCUUAUGGAUCCAGGGCGAUAAGGAG | ((((((((......))).))))).......... | [
"URS0001A23531_137591/1-33",
"URS0001A24A21_12908/1-33",
"URS0001A235E3_46256/1-33"
] | [
"CUCUGGUUCUUAUGGAUCCAGGGCGAUAAGGAG",
"CUCUGGUUCUUAUAGAUCCAGGGCGAUAAGGAG",
"CUCUGAUUUUUAUAAAUUCAGGGCGAUAAGGAG"
] | rfam_14_5_mafft |
URS0001A23538_12908_1-34 | CUAUGACUAUUACUAUUAGUCAUGGCGGAAGGAG | ((((((((.........))))))))......... | [
"URS0001A23538_12908/1-34",
"URS0001A231BE_12908/1-28",
"URS0001A233A8_12908/1-28",
"URS0001A23BAF_12908/1-31",
"URS0001A23CE6_12908/1-31",
"URS0001A241B7_12908/1-30",
"URS0001A235B9_12908/1-31",
"URS0001A24934_12908/1-30",
"URS0001A23357_12908/1-31",
"URS0001A241D7_12908/1-31"
] | [
"-CUAUGACUAUUACUAUUAGUCAUGGCGGAAGGAG",
"-CUAUGACUU------AUAGUCAUGGCGGAAGGAG",
"-CUAUGACAU------UAAGUCAUGGCGGAAGGAG",
"CUUAUCAUGA----UUAAAUUCAUGGCGGAAGGAG",
"-CUAUGGCUUG---AAUUAGUCAUGGCGGAAGGAG",
"-CUAUGGUAU----UAAAUACCAUGGCGGAAGGAG",
"-CUAUAGUUAC---CUACAACUAUGGCGGAAGGAG",
"-CUAUGAACG----UAAAGUUCAUGGCG... | rfam_14_5_mafft |
URS0001A2354E_97138_1-94 | UACGAGCGAUGAUACAGAAGGUUGCGGCAUACAAAAUGAGUUGUGUGCAGGUUUUUCUGAGGAGCGAUGUCCAGUUCAAGAAACCGGGCGACAU | ..............((.((((...(.(((................))).)..)))).))........((((..((((........)))))))). | [
"URS0001A2354E_97138/1-94",
"URS0001A23DD1_12908/1-78"
] | [
"UACGAGCGAUGAUACAGAAGGUUGCGGCAUACAAAAUGAGUUGUGUGCAGGUUUUUCUGAGGAGCGAUGUCCAGUUCAAGAAACCGGGCGACAU",
"UAGGAGCGAUGAUGCAG-AGGUUGC---------------CUAGAGAUAGGGUUUUCUGCGGAGCGAUGUCCAGUUCAAGAAACCGGGCGACAA"
] | rfam_14_5_mafft |
URS0001A23564_12908_1-54 | GAAAGGUCGGGCAGAUACCCGGCUGGACGCGCGAACUUGCGUGUCUCAUUUAGG | ....(((((((......)))))))((((((((......))))))))........ | [
"URS0001A23564_12908/1-54",
"URS0001A2468E_12908/1-51"
] | [
"GAAAGGUCGGGCAGAUACCCGGCUGGACGCGCGAACUUGCGUGUCUCAUUUAGG",
"GAAAGAUCGGGUAGAUACCCGGUUGGGCGUCCA---CUGGAUGCCUCAAUUAGG"
] | rfam_14_5_mafft |
URS0001A23566_1463920_1-50 | UCGGCUCCGGUUCACGCCGUGGGCAAUUCCGCCCCCUGCGACCCGGCGCC | ..(((.((((....(((.(.((..........)).).)))..)))).))) | [
"URS0001A23566_1463920/1-50",
"URS0001A23EF4_1609137/1-49",
"URS0001A23EF4_1648182/1-49",
"URS0001A235EA_1463842/1-49",
"URS0001A2431A_1609135/1-49",
"URS0001A2431A_1463851/1-49",
"URS0001A2495A_1463843/1-49",
"URS0001A23792_1460244/1-49",
"URS0001A23792_1961/1-49",
"URS0001A23792_465541/1-49"
] | [
"UCGGCUCCGGUUCACGCCGUGGGCAAUUCCGCCCCCUGCGACCCGGCGCC",
"UCGGCCCCGGUUCACGCACGUAGCAAUU-CGGCUCCUGCGACCCGGCGCC",
"UCGGCCCCGGUUCACGCACGUAGCAAUU-CGGCUCCUGCGACCCGGCGCC",
"UCGGCCCCGGUUCACGCAAGCAGCAAUU-CGGCUCCUGCGACCCGGCGCC",
"UCGGCCCCGGUUCACGCAAGUAGCAAUU-CGGCUCCUGCGACCCGGCGCC",
"UCGGCCCCGGUUCACGCAAGUAGCAAUU-CGGCUC... | rfam_14_5_mafft |
URS0001A2356D_12908_1-39 | CUAUGAUUUACUAGAAAAACCAAAUCAUGGCGGAAGGAG | ((((((((..............))))))))......... | [
"URS0001A2356D_12908/1-39",
"URS0001A23FD8_12908/1-32",
"URS0001A245D0_12908/1-33",
"URS0001A23EEE_12908/1-33",
"URS0001A2448D_12908/1-28",
"URS0001A2337F_12908/1-32",
"URS0001A24225_12908/1-32",
"URS0001A23D08_12908/1-32",
"URS0001A247B1_12908/1-35",
"URS0001A23906_12908/1-32"
] | [
"CUAUGAUUUACUAGAAAAACCAAAUCAUGGCGGAAGGAG",
"CUAUGUCAGGAA-------AACUGUCAUGGCGGAAGGAG",
"CUAUAGUUCUACA------GAGAAUUAUGGCGGAAGGAG",
"CUAUGAUUGAAA------UGAAAAUCAUGGCAGAAGGAG",
"CUAUGA----UG-------AAAAAUCAUGGCGGAAGGAG",
"CUAUGAACUAUA-------GAAGUUCAUGGCGGAAGGAG",
"CUAUGUCUAGAU-------AUUAGAUAUGGCGGAAGGAG",
"... | rfam_14_5_mafft |
URS0001A23581_1223515_1-84 | ACUCAGGCACGAUCCGGGCCUCUGGAACACCUCAUGUAGCAGGUGUGUACGCGCGGAACCGACCUGAUGUUCAAUCCUGAGGGA | ((.((((.....((((.((.......(((((..........)))))....)).)))).....))))..)).............. | [
"URS0001A23581_1223515/1-84",
"URS0001A240B8_548477/1-71",
"URS0001A240B8_548478/1-71",
"URS0001A24621_585529/1-77"
] | [
"ACUCAGGCACGAUCCGGGCCUCUGGAACACCUCAUGUAGCAGGU---GUGUACGCGCGGAACCGACCUGAUGU-UCAAUCCUGAGGGA",
"ACUCAGGCACGACCCG-----------UUUCGCUCAUGGCGAGU------GCACGACGGGGACGACCUGAAGUCUCAAUCCUGAGGGA",
"ACUCAGGCACGACCCG-----------UUUCGCUCAUGGCGAGU------GCACGACGGGGACGACCUGAAGUCUCAAUCCUGAGGGA",
"ACUCAGGCACGAUCCG-----------UUUCUG... | rfam_14_5_mafft |
URS0001A2358F_12908_1-109 | ACUCAGGCACGAUCUCUGCCAAGGUAAGUUGUCGUUGUUAUUAAGUGAUAGUGACGCUUUUGGCCUGUGAAGAUGCGGAGAACCGACCUGAAGUUUCAAUCCUGAGGGA | (((((((.....(((((((..((((.....................................))))........))))))).....)))).)))............... | [
"URS0001A2358F_12908/1-109",
"URS0001A24A1A_12908/1-109",
"URS0001A247E9_945711/1-107",
"URS0001A247E9_65058/1-107",
"URS0001A24452_1006579/1-107"
] | [
"ACUCAGGCACGAUCUCUGCCAAGGUAAGUUGUCGUUGUUAUUAAGUGAUAGUGACGCUUUUGGCCUGUGAAGAUGCGGAGAACCGACCUGAAGUUUCAAUCCUGAGGGA",
"ACUCAGGCACGAUCUCUGCCAAGGUAAGUUGUCGUUGUUAUUAAGUGAUAAUGACGCUUUUGGCCUGUGAAGAUGCGGAGAACCGACCUGAAGUUUCAAUCCUGAGGGA",
"ACUCAGGCACGAUCCCUGCC-GGGCGGGCUGUCAUUG-CAACAGGCGAUGAUGAUGCCUCUGGCCAGUGAAGAUGUAGGGAACCG... | rfam_14_5_mafft |
URS0001A23597_12908_1-53 | ACGGUACCGGUUCCCGUUGGUGCGCAAACUCCGCGCCCAUCGACCCGGCGACC | ..(((.((((....((.(((.(.............)))).))..))))..))) | [
"URS0001A23597_12908/1-53",
"URS0001A23C97_12908/1-50"
] | [
"ACGGUACCGGUUCCCGUUGGUGCGCAAACUCCGCGCCCAUCGACCCGGCGACC",
"GCGGUACCGGUUCACGCCGGGGCGGA---UUCCCCCCCGGCGACCCGGCGACC"
] | rfam_14_5_mafft |
URS0001A235A7_12908_1-52 | CCUGUCAUCGACAGGUCAUCGGAAUGUGGUCCCUCCGGGACUGAACCGGCAA | (((((.....))))).....((.....(((((.....)))))...))..... | [
"URS0001A235A7_12908/1-52",
"URS0001A245F1_12908/1-51",
"URS0001A232E0_12908/1-51"
] | [
"CCUGUC-AUCGACAGGUCAUCGGAAUGUGGUCCCUCCGGGACUGAACCGGCAA",
"CCUGCCAGAUAGCAGGUCAUCGGAAUGUGGUCUU--CGGGACUGAACCGGCCA",
"CCUGUC-GUCGACAGGUCAUCGGAAUGUGGUCCCU-CGGGACUGAACCGGCAA"
] | rfam_14_5_mafft |
URS0001A235A9_1463824_1-68 | UCGGUUCCGGUUCACGUCCAGCACGGCAGCACGGCAGAUACAGCCGUGGGCCGGGGCGACCCGGGGCC | ..(((.((((....(((((..................................)))))..)))).))) | [
"URS0001A235A9_1463824/1-68",
"URS0001A235E5_1122247/1-58",
"URS0001A24A86_1206733/1-43",
"URS0001A23744_1206743/1-68",
"URS0001A2443A_1206720/1-68",
"URS0001A234BD_1206727/1-68",
"URS0001A23FE1_1415166/1-65"
] | [
"UCGGUUCCGGUUCACGUCCAGCACGGCA-GCACGGCAGAUACAGCCGUGGGCCGGGGCGACCCGGGGCC",
"UCGGUUCCGGUUCACGCCGUCAACUGCCCGAACGAC-----------UCGGCAGCGGCGACCCGGGGCC",
"UCGGUUCCGGUUCACGUCUCGCAUCGC--------------------------CAGGCGACCCGGAGCC",
"UCGGUUCCGGUUCACGUCCAUCAAGGCA-GCACGGCAGAUUCCGCCGUGGGCUCGGGCGACCCGGGGCC",
"UCGGUUCCGGUUCAC... | rfam_14_5_mafft |
URS0001A235BC_548476_1-121 | ACUCGGGCACGAUCCUUUCACGCUCCCAGUUGUCAUCGGGCGCCGUCAUAGCGACGGCGCGCGAUAGUGCGAAUAGGGAAGCGUUGCGGAAGGAACCGACCCGUAGUUCAACCCUGAGGGA | (((((((.....((((((((((((.......................................................)))))...))))))).....)))).))).............. | [
"URS0001A235BC_548476/1-121",
"URS0001A249F6_553206/1-58"
] | [
"ACUCGGGCACGAUCCUUUCACGCUCCCAGUUGUCAUCGGGCGCCGUCAUAGCGACGGCGCGCGAUAGUGCGAAUAGGGAAGCGUUGCGGAAGGAACCGACCCGUAGUUCAACCCUGAGGGA",
"ACUCGGGCACGAUCCUC---------------------------------------------------------------ACUAAGCGUGUGGAACCGACCCGUAGUCCAACCCUGAGGGA"
] | rfam_14_5_mafft |
URS0001A235E0_12908_1-34 | CUUUGGGCGACAUUACGGCUCAAGGCGGAAGGAG | ((((((((.........))))))))......... | [
"URS0001A235E0_12908/1-34",
"URS0001A24104_12908/1-34"
] | [
"CUUUGGGCGACAUUACGGCUCAAGGCGGAAGGAG",
"CUUUGAGGCAGGCAAUGCCUCAAGGCGGAAGGAG"
] | rfam_14_5_mafft |
URS0001A235ED_12908_1-33 | CUAUAUUUCCGUUAAGGACUUAUGGCAAAGGAG | (((((..(((.....)))..)))))........ | [
"URS0001A235ED_12908/1-33",
"URS0001A23B04_12908/1-33",
"URS0001A23587_12908/1-33",
"URS0001A23983_1074467/1-33",
"URS0001A23983_12908/1-33",
"URS0001A238FF_12908/1-33"
] | [
"CUAUAUUUCCGUUAAGGACUUAUGGCAAAGGAG",
"CUAUAUUUCCGUCAAGGAUUUAUGGCAAAGGAG",
"CUAUAUUUCCGUUCAGGAUUUAUGGCAAAGGAG",
"CUAUAUUUCCGUUAAGGAUUUAUGGCAAAGGAG",
"CUAUAUUUCCGUUAAGGAUUUAUGGCAAAGGAG",
"CUAUAUUUCCGGUAAGGAUUUAUGGCAAAGGAG"
] | rfam_14_5_mafft |
URS0001A235F1_12908_1-77 | GGGCGUGUUCUUAGCACGGUCGCAGCAAAGUCGUGUUAAUAGCGAUGCCUUUGGCCAGACAUCGUGGUUAGUGAAUC | ((.(((.........))).))..............(((((.((((((.((......)).)))))).)))))...... | [
"URS0001A235F1_12908/1-77",
"URS0001A24491_12908/1-73",
"URS0001A23C43_12908/1-73",
"URS0001A236BA_12908/1-75"
] | [
"-GGG-------CGUGUUCUUAGCACGGUCGCAGCAAAGUCGUGUUAAUAGCGAUGCCUUUGGCCAGACAUCGUGGUUAGUGAAUC",
"GGGGCACGCUUAGAGUCCCUUGCGC------------AUUGUGUUAAUAGUGGUGCCUUUGGCCGGACAUCGUGGUUAGUGAAUC",
"GGGGCACGCUUAGAGUCCCUUGCGC------------GUUGUGUUAAUAGCGAUGCCUUUGGCCGGACAUCGUGGUUAGUGAAUC",
"GGGG-------AGAGUCUUAGGCUC---CCCAGCACGGGAGU... | rfam_14_5_mafft |
URS0001A235F7_12908_1-82 | CCGGUUCCGGUUCACGCCCGAGUCCGUGCCCCGCCGCGACCAUCUGCCGCCGGGUCGGACGCCGAGGGGCGACCCGGCGACC | ..(((.((((....(((((...............................................)))))..))))..))) | [
"URS0001A235F7_12908/1-82",
"URS0001A23CC9_12908/1-68",
"URS0001A239A7_12908/1-40",
"URS0001A2356C_12908/1-37",
"URS0001A237BE_1206725/1-46"
] | [
"CCGGUUCCGGUUCACGCCCGAGUCCGUGCCCCGCCGCGACCAUCUGCCG-CCGGGUCGGACGCCGAGGGGCGACCCGGCGACC",
"CAGGUUCCGGUUCACGCCCGAGC-------------CGCCCGCUUGAUGAUCAAGGCGGCGCU--GACGGCGACCCGGCGACC",
"CAGGUUCCGGUUCACGCCCG-----------------------------------------GC--GCGGGCGACCCGGCGACC",
"GCGGUACCGGUUCACGCCU-----------------------------... | rfam_14_5_mafft |
URS0001A235FB_12908_1-82 | UGAUAGCUAUGAAGUUUGAAGUUACUGUCCAUGAGACAGAGAAUUCGGCGGAGCGAAUGUCAAGUUAGGAAACUGACGGCAA | .............(((.(((....(((((.....)))))....))))))........((((..((((......)))))))). | [
"URS0001A235FB_12908/1-82",
"URS0001A239A4_12908/1-82"
] | [
"UGAUAGCUAUGAAGUUUGAAGUUACUGUCCAUGAGACAGAGAAUUCGGCGGAGCGAAUGUCAAGUUAGGAAACUGACGGCAA",
"UGAUAGCUAUGAAGUUUGAAGUUACUGUCCGUGAGACAGAGAAUUCGGCGGAGCGAAUGUCAAGUUAGGAAACUGACGGCAA"
] | rfam_14_5_mafft |
URS0001A23603_12908_1-57 | GAAAGGGUACGGAUACCGAAACGUACCUGGGCGAGCAAAGCGCAAGCCCCUAUUAAA | ....(((((((..........)))))))((((.............))))........ | [
"URS0001A23603_12908/1-57",
"URS0001A23CF6_12908/1-52",
"URS0001A238EE_12908/1-52",
"URS0001A23C83_12908/1-55",
"URS0001A23541_12908/1-54",
"URS0001A23603_1232454/1-57",
"URS0001A2373D_1232441/1-56",
"URS0001A23603_658085/1-57"
] | [
"GAAAGGGUACGGAUACCGAAACGUACCUGGGCGAGC-AAAGCGCAAGCCCCUAUUAAA",
"GAAAGGGUGUGGAUACCGAAACGCACCU-GGGAUUU-AAAG----AUCCCCUAUUAAA",
"GAAAGGGUGUGGAUACCGAAACACACCU-GGGAUUU-AAAG----AUCCCCUAUUAAA",
"GAAAGGGUGCGAAUACCG--ACGCACCUGGGUGGCGCGAAGCGC-AACCCCUAUUAAA",
"GAAAGGGUGUGGAUACCG--ACACACCUGGAUGGCG-GCACAGC-CAUCCCUAUUAAA"... | rfam_14_5_mafft |
URS0001A2361C_12908_1-58 | GAAAGGUUGUGUUUUAGCGCACAACUGGAUGCGUAACAUACCGAGCAUCCCAAUUAGG | ....((((((((......))))))))((((((.(........).))))))........ | [
"URS0001A2361C_12908/1-58",
"URS0001A23333_12908/1-54",
"URS0001A2335A_12908/1-56",
"URS0001A24758_12908/1-57",
"URS0001A239DE_12908/1-57",
"URS0001A24643_12908/1-57"
] | [
"GAAAGGUUGUGUUUUAGCGCACAACUGGAUGCGUAACAUACCGAGCAUCCCAAUUAGG",
"GAAAGGUUGUG---UAAAACACAACUGGAUGCACAACAUACCG-GCAUCCCAAUUAGG",
"GAAAGGUUGUGUUUUAGCGCACAACUGGAUGCGU-ACAUACCG-GCAUCCCAAUUAGG",
"GAAAGGUUGUGUUUUAGCGCACAACUGGAUGCGU-UCAUACCGAGCAUCCCAAUUAGG",
"GAAAGGUUGUGUUUUAGCGCACAACUGGAUGCGU-ACAUACCGAGCAUCCCAAUUAGG"... | rfam_14_5_mafft |
URS0001A23620_28444_1-55 | GUGGUUCCGGUUCCCGCCCCCUGGUCUCCAGGCUGACAGAGGCGAUCCGGCGACC | ..(((.((((....(((((...................).))))..))))..))) | [
"URS0001A23620_28444/1-55",
"URS0001A2469E_512565/1-49"
] | [
"GUGGUUCCGGUUCCCGCCCCCUGGUCUCCAGGCUGACAGAGGCGAUCCGGCGACC",
"GGGGUUCCGGUUCACGCCACGU----UCCAG--CAGGAAUGGCGACCCGGCGACC"
] | rfam_14_5_mafft |
URS0001A23623_1501230_1-33 | CUCUGAUUCACAUGGUGUUUCAGGGCAAAAGAG | (((((...((.....))...)))))........ | [
"URS0001A23623_1501230/1-33",
"URS0001A249AD_12908/1-28",
"URS0001A241C9_12908/1-32",
"URS0001A24773_1684142/1-33",
"URS0001A24773_1408103/1-33",
"URS0001A24476_1460641/1-32",
"URS0001A24476_1246626/1-32",
"URS0001A246DC_1036673/1-33",
"URS0001A23623_1007103/1-33",
"URS0001A23623_1444314/1-33"
] | [
"CUCUGAUUCACAUGGUGUUUCAGGGCAAAAGAG-",
"-----CUCUGAGUG-UGUUUCAGGGCAAAAGGAG",
"CUCUGAUUCCGGUG--GAUUCAGGGCAAAAGGAG",
"CUCUGUCUCGCAUA-UGAUUCAGGGCAAAAGGAG",
"CUCUGUCUCGCAUA-UGAUUCAGGGCAAAAGGAG",
"CUCUGUUUCGAAUA--GAUUCAGGGCAAAAGGAG",
"CUCUGUUUCGAAUA--GAUUCAGGGCAAAAGGAG",
"CUCUGAUCCACAUGGUGGUUCAGGGCAAAAGAG-"... | rfam_14_5_mafft |
URS0001A23629_12908_1-77 | GAGGGCAGUCUUAGAGCCCUUGGCACAUACGUGUUAAUAGUGUCAUGCUUUUGGCCGAGCAACAUGGUUAGUGAAUC | ((((((.........))))))............(((((.(((...(((((......))))).))).)))))...... | [
"URS0001A23629_12908/1-77",
"URS0001A23BCA_1236509/1-76",
"URS0001A23FCA_12908/1-77",
"URS0001A23832_12908/1-77",
"URS0001A2381C_12908/1-76",
"URS0001A23B8D_12908/1-76",
"URS0001A24118_575611/1-77",
"URS0001A24099_28126/1-77",
"URS0001A24099_873513/1-77",
"URS0001A24099_1032506/1-77"
] | [
"GAGGGCAGUCUUAGAG--CCCUUGGCACA-UACGUGUUAAUAGUGUCAUGCUUUUGGCCGAGCAACAUGGUUAGUGAAUC",
"GGAGGUUGACUUAGAG--CCUCCGGCACG-UGCGUGUUAAUAGUGUCA-GCUUUUGGCCGAGCUGUACGGUUAGUGAAUC",
"GAGGGCAGUCUUAGAG--CCCUUGGCACA-UGCGUGUUAAUAGUGUCAUGCUUUUGGCCGAGCAACAUGGUUAGUGAAUC",
"GAGGGCAGUCUUAGAG--CCCUUAGCACA-UGCGUGUUAAUAGUGUCAUGCUUUUGG... | rfam_14_5_mafft |
URS0001A2362B_12908_1-91 | CCCGUACACACGGGACGACAUGUGGCUCGGGUGGUCCACCGGACCACCGCAACCGAGCGGCGGAGCCGCGAGGGGAGAGCUGAAUCGCAAG | (((((....)))))..((.....(((((................................................)))))...))..... | [
"URS0001A2362B_12908/1-91",
"URS0001A247FE_12908/1-64"
] | [
"CCCGUACACACGGGACGACAUGUGGCUCGGGUGGUCCACCGGACCACCGCAACCGAGCGGCGGAGCCGCGAGGGGAGAGCUGAAUCGCAAG",
"CCCGUCGACACGGGACGAUAUGUGGCUCAAGCGGUCCGACGGACCAC---------------------------GAGGGCCGAAUCGCAAG"
] | rfam_14_5_mafft |
URS0001A23634_12908_1-63 | GGCUCCCAGGAGCCCAAACAUAGCGGGUCGUCAAAGACCCGCACUGCUAACGGAAGACAGAAA | (((((....)))))........(((((((......)))))))..................... | [
"URS0001A23634_12908/1-63",
"URS0001A24577_1454373/1-62",
"URS0001A23569_12908/1-63",
"URS0001A23569_988812/1-63"
] | [
"GGCUCCCAGGAGCCCAAACAUAGCGGGUCGUCAAAGACCCGCACUGCU-AACGGAAGACAGAAA",
"--GGCCGAAAGGCCCACACAUAGCGGGGCGCAAAGCCCUCGCACAGCUAAACGGAAGACAGAAA",
"GGCUCGCAAGAGCCCAAACAUAGCGGGGCG-GAAAGCCUCGCAUUGCUAAACGGAAGACAGAAA",
"GGCUCGCAAGAGCCCAAACAUAGCGGGGCG-GAAAGCCUCGCAUUGCUAAACGGAAGACAGAAA"
] | rfam_14_5_mafft |
URS0001A23648_12908_1-103 | CUGAUGGCCGCGUACGGGUCAAUUGCGGACUGCAACACCCGGUCUCCCUGCCGGUCCCGUCCGGAAUGGACGAACCGGUCGAGGGGGAACGCGUCUCCGUCAG | (((((...(((((..((((...(((((...))))).))))..(((((((((..........................))..)))))))))))).....))))) | [
"URS0001A23648_12908/1-103",
"URS0001A24191_12908/1-100",
"URS0001A23815_12908/1-100",
"URS0001A24936_12908/1-100",
"URS0001A238A6_662479/1-100",
"URS0001A244DE_12908/1-100",
"URS0001A23562_12908/1-100",
"URS0001A24782_12908/1-100",
"URS0001A23C88_12908/1-103",
"URS0001A2486D_797114/1-100"
] | [
"CUGAUGGCCGCGUACGGGUCAAUUGCGGACUGCAACACCCGGUCUCCCUGCCGGUCCCGUCCGGAAUGGACGAACCGGUCGAGGGGGAACGCGUCUCCGUCAG",
"CUGAUGGGCGCGUCUGGGUCAAUUGCGGACUGCAACACCCACUCUCUCUCCCCGUCCCGAACGGGAUGGA---ACUCACGGAGGGAGACCGCGUUUCCGUCAG",
"CUGAUGGGCGCGUCUGGGUCAAUUGCGGACUGCAACACCCACUCUCUCUCCCCGUCCCGGAUGGGAUGGA---ACUCACGGAGGGAGAACGCGUUUC... | rfam_14_5_mafft |
URS0001A2364A_12908_1-33 | CAUUGGCGAAGGAGUAUGCCUUAAUUCUCAGUG | ((((((.(((((......))))....))))))) | [
"URS0001A2364A_12908/1-33",
"URS0001A242A1_12908/1-31",
"URS0001A243C8_12908/1-33"
] | [
"CAUUGGCGAAGGAGUAUGCCUUAAUUCUCAGUG",
"AACUAGCGAAGGAUA--GCCUUAAUUCUUAGUU",
"CGCUGGCGAAGGAGGAUGCCUUAAUUCCCAGUG"
] | rfam_14_5_mafft |
URS0001A23650_12908_1-99 | GGGGACCUUCGGGGCCCUUCACAUCACAGACAGCCGGGCCCAUACCCGGCGCAAACCAGAGAGCGGGCCCUUGGGUCCGACGCAAACGGAAGACAGAAA | ((((.(((...)))))))..............(.((((((.................................)))))).).................. | [
"URS0001A23650_12908/1-99",
"URS0001A2400A_12908/1-98",
"URS0001A237F8_12908/1-71"
] | [
"GGGGACCUUCGGGGCCCUUCACAUCACAGACAGCCGGGCCCAUACCCGGCGCAAACCAGAGAGCGGGCCCUUGGGUCCGACGCA-AACGGAAGACAGAAA",
"GGGGACCUCAGGGGCCCUACACA-CAUAGACAGCCGGGCCCAUACCCGGCGCGACCCAAAGAGCGGACCUCU-GGUCCGACGCAAAACGGAAGACAGAAA",
"GGGGACCUUCGGGGCCCUAUACA-CACAGACAGCCGGGCCCAUACCCGGCGCAGACC----------------------------AACGGAAGACAGAAA"
] | rfam_14_5_mafft |
URS0001A23687_1219080_1-52 | CGUGUGGUGUCCAACCUUAGAUUUGGAUAGCGACGCGGCCUAUAAAUGAGGU | (((((.((..(((((....)..))))...)).)))))............... | [
"URS0001A23687_1219080/1-52",
"URS0001A23687_1219072/1-52",
"URS0001A23E71_1191324/1-49",
"URS0001A24066_675813/1-51"
] | [
"CGUGUGGUGUCCAACCUUAGAUUUGGAUAGCGACGCGGCCUAUAAAUGAGGU",
"CGUGUGGUGUCCAACCUUAGAUUUGGAUAGCGACGCGGCCUAUAAAUGAGGU",
"CGUGUGGUGUCCGG-CUUAGAAUCGGAUGGCGACGCGGCCU--AAUUGAGGU",
"CGUGUGGUGUCCGG-CAUUGAUCCGGAUAGCGACGCGGCCUACAUUUGAGGU"
] | rfam_14_5_mafft |
URS0001A236A0_391598_1-35 | AAUUAUCGAAGGAUAUAUGACCUGAAUUCAUAAUU | ((((((.(.(((........))).....))))))) | [
"URS0001A236A0_391598/1-35",
"URS0001A23213_12908/1-33",
"URS0001A2361A_12908/1-34",
"URS0001A2361A_1121896/1-34",
"URS0001A24512_12908/1-33",
"URS0001A238FB_12908/1-32",
"URS0001A24301_12908/1-31",
"URS0001A23494_12908/1-32",
"URS0001A243D6_12908/1-32",
"URS0001A24342_12908/1-34"
] | [
"-AAUUAUCGAAGGAUAUAUGACCUGAAUUCAUAAUU-",
"-GGUUAUCGAAGGAUUC--GACCUGAAUUCAUAACC-",
"-AAUUAUCGAAGGAUAUA-GACCUGAAUUCAUAAUU-",
"-AAUUAUCGAAGGAUAUA-GACCUGAAUUCAUAAUU-",
"UAAUUAUCGAAGGAA----UGCCUUAAUUCAUAAUCA",
"-UAUUAUCGAAGGAA----UGCCUUAAUUCAUAAUUA",
"-AAUUAUCGAAGGAC----UGCCUUAAUUCAUAGUU-",
"-GAUUGUCGAAGGA... | rfam_14_5_mafft |
URS0001A236A2_1203562_1-67 | ACUCGGGCACGAUCCGUACCGGCAUAAUUCAGUGUGCGGAACCGACCCGUAGUCCAACCCUGAGGGA | (((((((.....(((((((..............))))))).....)))).))).............. | [
"URS0001A236A2_1203562/1-67",
"URS0001A23785_161896/1-61",
"URS0001A247B8_12908/1-67",
"URS0001A247B8_1203561/1-67",
"URS0001A238C7_12908/1-67",
"URS0001A24246_169292/1-60",
"URS0001A245E8_12908/1-60",
"URS0001A245E8_1203563/1-60",
"URS0001A23918_12908/1-60",
"URS0001A243C3_169292/1-58"
] | [
"ACUCGGGCACGAUCCGUACCGGCAUAAUUCAGUGUGCGGAACCGACCCGUAGUCCAACCCUGAGGGA",
"ACUCGGGCACGAUCUUCGACAGUAU----UCGAGCGAAGAACCGACCCGU--UACAAACCUGAGGGA",
"ACUCGGGCACGAUCCGUACCGUCAUUAUUCAGUGUGCGGAACCGACCCGUAGUCCAACCCUGAGGGA",
"ACUCGGGCACGAUCCGUACCGUCAUUAUUCAGUGUGCGGAACCGACCCGUAGUCCAACCCUGAGGGA",
"ACUCGGGCACGAUCCGUACCGUC... | rfam_14_5_mafft |
URS0001A236B4_12908_1-93 | AGCACUCUUUCAUUUUUAUGAAAGUGCUGGCAUAUGUAAGUCCGACGUGCCGCUCCCGGCACGGCCCCCCGAGAAAUUGGGCUUUGGGAUUAC | ((((((................)))))).......((((..((...(((((......)))))(((((...........)))))...)).)))) | [
"URS0001A236B4_12908/1-93",
"URS0001A243F2_12908/1-78",
"URS0001A23ED3_12908/1-82",
"URS0001A23F28_12908/1-84",
"URS0001A236AE_12908/1-80",
"URS0001A23DDF_12908/1-74",
"URS0001A23D44_12908/1-72",
"URS0001A231D0_12908/1-70",
"URS0001A23E59_12908/1-70",
"URS0001A247E0_12908/1-70"
] | [
"AGCACUCUUUCAUUUUUAUGAAAGUGCUGGCAUAUGUAAGUCCGACGUGC---CGCUCCCGGCACGGCCCCCCGAGAAAUUGGGCUUUGGGAUUAC",
"AGCACUAU----UCGUGAUGAAAGUGCUGGCAUAUGUAAAUCCGACGUGC---UUCAC-C-GCACGGCCUGC---------GUGGCUGGGGAUUAC",
"AGCACUU-----UUAAAAUUUAAGUGCUGGCAGAAGUAAGUCCGACGUGCACUAUUGCGU-GCACUGCCC--------AACUGGGCUUGGGAUUAC",
"AGCACUCUU... | rfam_14_5_mafft |
URS0001A236CD_12908_1-87 | CUGAUCAGGCGUAUUGGGCGAACGUUCGUGCAACGAGCCCUUCUUCAUACAGCCAUUAAUGAUGUGAUGAAGAUGCGCCAUUGUCAG | (((((..(((((...((((...((((.....)))).))))..(((((((((.(.......).)))).)))))..)))))...))))) | [
"URS0001A236CD_12908/1-87",
"URS0001A24974_593750/1-85"
] | [
"CUGAUCAGGCGUAUUGGGCGAACGUUCGUGCAACGAG-CCCUUCUUCAUACAGCCAUUAAUGAUGUGAUGAAGAUGCGCCAUUGUCAG",
"CUGAUCAGGCGCA-UGGGCGAACGUUCGUGCAACGAGCCCCUUCUUCGUGCGG--ACUAAUGUCCGCGUGAAGAUGCGCCAUUGUCAG"
] | rfam_14_5_mafft |
URS0001A236D0_12908_1-77 | UUGCGGGUGGUGUUUGCGUUUUAUUGCGUGAAGCCUUGGGUCCGGUGUGCGCAAUCCCGGAACCUCGCCGUCUGCAA | (((((((((((((((((((......))))))).....((((((((...........)))).)))))))))))))))) | [
"URS0001A236D0_12908/1-77",
"URS0001A246AB_12908/1-70",
"URS0001A23EA3_12908/1-76",
"URS0001A23393_12908/1-76",
"URS0001A23505_12908/1-75",
"URS0001A24240_12908/1-76",
"URS0001A24780_12908/1-77",
"URS0001A23A45_12908/1-77",
"URS0001A23F29_12908/1-77",
"URS0001A242A6_290318/1-77"
] | [
"UUGCGGGUGGUGUUUGCGUUUUAUUGCGUGAAGCCUUGGGUCCGGUGUGCGCAAUCCCGGAACCUCGCCGUCUGCAA",
"UUGCGGGUGGUGUU---GCGUUUAUGCGUGAAGC-UUGGGUCC-GUGUGCGC-AUCCCGGAACCUC-CCGUCUGCAA",
"UUGCGGGUGGUGUUUGCGUUUUAUUGCGUGAAGCCUUGGGUCCGGUGUGCGCAAUCCCGGAACCUCGCCGUC-GCAA",
"UUGCGGGUGGUGUUUGCGUUUUAUUGCGUGAAGCCUUGGGUCC-GUGUGCGCAAUCCCGGAACCUC... | rfam_14_5_mafft |
URS0001A236D3_1033810_1-34 | CUCUGGGUUGAAAUAACAUUCAGGGCGGAAGGAG | ((((((((.........))))))))......... | [
"URS0001A236D3_1033810/1-34",
"URS0001A23530_1202533/1-31",
"URS0001A23530_1397/1-31",
"URS0001A2371F_12908/1-34",
"URS0001A23530_1579338/1-31",
"URS0001A2433D_12908/1-29",
"URS0001A23E26_1444308/1-32",
"URS0001A23E26_1659191/1-32",
"URS0001A246C5_1422/1-32",
"URS0001A246C5_420246/1-32"
] | [
"CUCUGGGUUGAAAUAACAUUCAGGGCGGAAGGAG",
"--CUCUGUUUCGA-AAGUUGCAGGGCGGAAGGAG",
"--CUCUGUUUCGA-AAGUUGCAGGGCGGAAGGAG",
"CUCUGAACGACAUUACAGUUCAGGGCGGAAGGAG",
"--CUCUGUUUCGA-AAGUUGCAGGGCGGAAGGAG",
"--CUAUGGUUU---AGAAACCAUGGCGGAAGGAG",
"--CUCUGUUUCGAUCAGAUACAGGGCGGAAGGAG",
"--CUCUGUUUCGAUCAGAUACAGGGCGGAAGGAG"... | rfam_14_5_mafft |
URS0001A236EB_320778_1-55 | CGUGUGGUGCCCGGCUUAGGAUCGGGAGAGCGACACGGCCUUAAAUGUUUGAGGU | (((((.((.((((((....).)))))...)).))))).................. | [
"URS0001A236EB_320778/1-55",
"URS0001A243A8_1279016/1-52",
"URS0001A243A8_43662/1-52",
"URS0001A243A8_1165091/1-52",
"URS0001A243A8_81037/1-52",
"URS0001A243A8_12908/1-52",
"URS0001A243A8_43658/1-52",
"URS0001A243A8_1117318/1-52",
"URS0001A243C4_87626/1-51",
"URS0001A235CF_1190607/1-51"
] | [
"CGUGUGGUGCCCGGCUUAGGAUCGGGAGAGCGACACGGCCUUAAAUGUUUGAGGU",
"CGUAUGGUGCCAGACUUCGGGUUUGGAGAGCGAUACGGCCUUA---ACUAGAGGU",
"CGUAUGGUGCCAGACUUCGGGUUUGGAGAGCGAUACGGCCUUA---ACUAGAGGU",
"CGUAUGGUGCCAGACUUCGGGUUUGGAGAGCGAUACGGCCUUA---ACUAGAGGU",
"CGUAUGGUGCCAGACUUCGGGUUUGGAGAGCGAUACGGCCUUA---ACUAGAGGU",
"CGUAUGGUGC... | rfam_14_5_mafft |
URS0001A236EC_12908_1-69 | GGCCUACCGUUCGGGGGGCUUUACCAUGGGCGGGGAAAACUCGUCGAACACACAAACGGAAGUCAGAAA | ((((..((......))))))........((((((.....))))))........................ | [
"URS0001A236EC_12908/1-69",
"URS0001A238AE_12908/1-66",
"URS0001A238AE_1366046/1-66",
"URS0001A23E47_12908/1-66",
"URS0001A2486A_12908/1-67",
"URS0001A23248_12908/1-66",
"URS0001A234B8_12908/1-67",
"URS0001A249A3_12908/1-65",
"URS0001A2323E_12908/1-66",
"URS0001A2366E_12908/1-69"
] | [
"GGCCUACCGUUCGGGGGGC-UUUACCAUGGGCGGGGAAAACUCGUCGAACACACAAACGGAAGUCAGAAA",
"-GGCCACCUUC-GGGGGGC-UUUACCAUGGGCGGGG-AGACCCGUCGAACACACAAACGGAAGUCAGAAA",
"-GGCCACCUUC-GGGGGGC-UUUACCAUGGGCGGGG-AGACCCGUCGAACACACAAACGGAAGUCAGAAA",
"-GGCCACCUUC-GGGGGGC-UUUACCAUGGGCGGGG-AAACUCGUCGAACACACAAACGGAAGUCAGAAA",
"-GGCCACCUUC... | rfam_14_5_mafft |
URS0001A23701_12908_1-89 | UUCUGUGAACUGUGGGGACCAUCUCCCCCUGCAGAUCCAGCAGCGGCAUGUGUCGCAGAAGAUGUAUUCAUUUUAAAGAUUAGAAGGAG | ..(((.((.((((((((.........)))))))).)))))..................(((((......)))))............... | [
"URS0001A23701_12908/1-89",
"URS0001A241A2_12908/1-76",
"URS0001A23509_12908/1-78"
] | [
"UUCUGUGAACUGUGGGGACCAUCUCCCCCUGCAGAUCCAGCAGCGGCAUGUGUCGCAGAAGAUGUAUUCAUUUUAAAGAUUAGAAGGAG",
"GGCUGCGAACUGUGGGGACGAUCUCCCCCUGCAGAUCCGGCCACGGCAAAUGCCG--AAA--------CCAUUUAGAGAGAAGGAG---",
"GGUUGUGAACUGUGGGGACAAUCUCCCCCUGCAGAUCCAGCCACGGCAGUUGCCGAAAAA--------CUAUUCAAUGAGAAGGAG---"
] | rfam_14_5_mafft |
URS0001A23704_12908_1-36 | GCGCUGUCGAAGGAUAUAGACCUGAAUUCACAGUAC | (.(((((.(.(((.......))).....)))))).) | [
"URS0001A23704_12908/1-36",
"URS0001A24084_906888/1-35",
"URS0001A24084_156586/1-35",
"URS0001A24A39_12908/1-32"
] | [
"GCGCUGUCGAAGGAUAUAGACCUGAAUUCACAGUAC",
"-GGCUGUCGAAGGAUAUUGACCUGAAUUCACAGUAC",
"-GGCUGUCGAAGGAUAUUGACCUGAAUUCACAGUAC",
"-AGUUGUCGAAGGAAA--GACCUUAAUUCACAAUU-"
] | rfam_14_5_mafft |
URS0001A2374B_12908_1-57 | AUCCCUGAAUCGCGAGGAACGGCCCCUUGCGCAUCGGGCAAAUUAAAACUGAAGGAG | ..(((.((..(((((((.......)))))))..)))))....(((....)))..... | [
"URS0001A2374B_12908/1-57",
"URS0001A246ED_12908/1-55",
"URS0001A23287_12908/1-56",
"URS0001A2413A_398767/1-56",
"URS0001A2413A_12908/1-56"
] | [
"AUCCCUGAAUCGCGAGGAACGGCCCCUUGCGCAUCGGGCAAAUUAAAACUGAAGGAG",
"GACCCAGAACCGCGAGGAACGGCCCCUUGCGGAUCGGGC-AAUAC-ACCUAAAGGAG",
"GACCCAGAACCGCGAGGAACGGCCCCUUGCGGAUCGGGC-AAUUAAACCUGAAGGAG",
"GACCCAGAACCGCGAGGAACGGCCCCUUGCGGAUCGGGC-AAUUCAACCUGAAGGAG",
"GACCCAGAACCGCGAGGAACGGCCCCUUGCGGAUCGGGC-AAUUCAACCUGAAGGAG"
] | rfam_14_5_mafft |
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