repo_name
string
path
string
copies
string
size
string
content
string
license
string
MJuddBooth/pandas
pandas/tests/groupby/test_function.py
1
41092
from string import ascii_lowercase import numpy as np import pytest from pandas.compat import product as cart_product from pandas.errors import UnsupportedFunctionCall import pandas as pd from pandas import ( DataFrame, Index, MultiIndex, Series, Timestamp, compat, date_range, isna) import pandas.core.nanops as ...
bsd-3-clause
maartenbreddels/vaex
packages/vaex-core/vaex/dataframe.py
1
282160
# -*- coding: utf-8 -*- from __future__ import division, print_function import os import math import time import itertools import functools import collections import sys import platform import warnings import re from functools import reduce import threading import six import vaex.utils # import vaex.image import numpy...
mit
NeuroVault/NeuroVault
neurovault/apps/statmaps/views.py
1
72792
import csv import functools import gzip import json import nibabel as nib import shutil import numpy as np import os import re import shutil import tarfile import tempfile import traceback import urllib import zipfile import zipstream from collections import OrderedDict from django.contrib import messages from django.c...
mit
pratapvardhan/pandas
pandas/tests/indexes/interval/test_interval.py
1
40846
from __future__ import division import pytest import numpy as np from pandas import ( Interval, IntervalIndex, Index, isna, notna, interval_range, Timestamp, Timedelta, date_range, timedelta_range) from pandas.compat import lzip import pandas.core.common as com from pandas.tests.indexes.common import Base impo...
bsd-3-clause
Ciaran1981/geospatial-learn
geospatial_learn/raster.py
1
57521
# -*- coding: utf-8 -*- """ The raster module. Description ----------- A series of tools for the manipulation of geospatial imagery/rasters such as masking or raster algebraic type functions and the conversion of Sentinel 2 data to gdal compatible formats. """ import gdal, ogr, osr import os import numpy as np...
gpl-3.0
leylabmpi/pyTecanFluent
pyTecanFluent/Tn5.py
1
30253
from __future__ import print_function # import ## batteries import os import sys import argparse import functools from itertools import product,cycle ## 3rd party import numpy as np import pandas as pd ## package from pyTecanFluent import Utils from pyTecanFluent import Fluent from pyTecanFluent import Labware from pyT...
mit
bkaiser94/red_cam_pipeline
diagnostics.py
1
37373
# -*- coding: utf-8 -*- """ Diagnostic Plots for Pipeline Author: Patrick O'Brien Date last updated: February 2017 """ # Import statements from glob import glob import os import numpy as np from matplotlib.backends.backend_pdf import PdfPages import matplotlib.pyplot as plt from PyPDF2 import PdfFileMerger import panda...
mit
cloud-fan/spark
python/pyspark/pandas/indexes/multi.py
1
41886
# # Licensed to the Apache Software Foundation (ASF) under one or more # contributor license agreements. See the NOTICE file distributed with # this work for additional information regarding copyright ownership. # The ASF licenses this file to You under the Apache License, Version 2.0 # (the "License"); you may not us...
apache-2.0
biocyberman/bcbio-nextgen
bcbio/install.py
1
33701
"""Handle installation and updates of bcbio-nextgen, third party software and data. Enables automated installation tool and in-place updates to install additional data and software. """ from __future__ import print_function import argparse import collections import contextlib import datetime import dateutil from distu...
mit
ColumbiaCMB/kid_readout
kid_readout/analysis/noise_measurement.py
1
34439
import numpy as np import pandas as pd import matplotlib from kid_readout.measurement.io import readoutnc #matplotlib.use('agg') #matplotlib.rcParams['mathtext.fontset'] = 'stix' #matplotlib.rcParams['font.size'] = 16.0 from matplotlib import pyplot as plt from mpl_toolkits.axes_grid1.inset_locator import inset_axes...
bsd-2-clause
grlee77/numpy
numpy/lib/function_base.py
1
158779
import collections.abc import functools import re import sys import warnings import numpy as np import numpy.core.numeric as _nx from numpy.core import transpose from numpy.core.numeric import ( ones, zeros, arange, concatenate, array, asarray, asanyarray, empty, ndarray, around, floor, ceil, take, dot, where,...
bsd-3-clause
carolFrohlich/nipype
nipype/pipeline/engine/utils.py
1
51555
#!/usr/bin/env python # -*- coding: utf-8 -*- # emacs: -*- mode: python; py-indent-offset: 4; indent-tabs-mode: nil -*- # vi: set ft=python sts=4 ts=4 sw=4 et: """Utility routines for workflow graphs """ from __future__ import print_function, division, unicode_literals, absolute_import from builtins import str, open, m...
bsd-3-clause
Garrett-R/scikit-learn
sklearn/svm/classes.py
1
30327
import numpy as np from .base import _fit_liblinear, BaseSVC, BaseLibSVM from ..base import BaseEstimator, RegressorMixin from ..linear_model.base import LinearClassifierMixin, SparseCoefMixin from ..feature_selection.from_model import _LearntSelectorMixin from ..utils import check_array, check_X_y class LinearSVC(B...
bsd-3-clause
dricciardelli/vae2vec
capt_gen_aux_e2o.py
1
41104
# -*- coding: utf-8 -*- import math import os import tensorflow as tf import numpy as np import pandas as pd import pickle import pickle as pkl import cv2 import skimage import random import tensorflow.python.platform from tensorflow.python.ops import rnn from keras.preprocessing import sequence from collections import...
mit
ganong123/HARK
ConsumptionSaving/ConsAggShockModel.py
1
31792
''' Consumption-saving models with aggregate productivity shocks as well as idiosyn- cratic income shocks. Currently only contains one microeconomic model with a basic solver. Also includes a subclass of Market called CobbDouglas economy, used for solving "macroeconomic" models with aggregate shocks. ''' import sys ...
apache-2.0
LoadedCoders/iHear
iHear-Py/pyAudioAnalysis/audioFeatureExtraction.py
1
31203
import time import os import glob import math import numpy from scipy.fftpack import fft from scipy.fftpack.realtransforms import dct import matplotlib.pyplot as plt from scipy.signal import lfilter from scikits.talkbox import lpc import audioBasicIO import utilities eps = 0.00000001 """ Time-domain audio features ...
mit
dpinney/omf
omf/models/smartSwitching.py
1
51679
import json, os, tempfile, shutil, csv, math, itertools, base64, re, datetime, platform from os.path import join as pJoin import pandas as pd import numpy as np import scipy.stats as stats import plotly as py import plotly.graph_objs as go from plotly.tools import make_subplots import networkx as nx import matplotlib ...
gpl-2.0
vansky/meg_playground
notebooks/exported/Topomap_real.py
1
30562
# -*- coding: utf-8 -*- # <nbformat>3.0</nbformat> # <markdowncell> # Imports # ======= # <codecell> #disable autosave functionality; #This script is taxing enough, and autosaving tends to push it over the edge # plus, autosaving seems to zero out the file before restoring it from the backup # this means an autosav...
gpl-2.0
caseyjlaw/vlart
realfast/controllers.py
1
43035
from __future__ import print_function, division, absolute_import#, unicode_literals # not casa compatible from builtins import bytes, dict, object, range, map, input#, str # not casa compatible from future.utils import itervalues, viewitems, iteritems, listvalues, listitems from io import open import pickle import os....
bsd-3-clause
boada/astlib_dev
astLib/astImages.py
1
50200
"""module for simple .fits image tasks (rotation, clipping out sections, making .pngs etc.) (c) 2007-2014 Matt Hilton U{http://astlib.sourceforge.net} Some routines in this module will fail if, e.g., asked to clip a section from a .fits image at a position not found within the image (as determined using the WCS). Wh...
lgpl-2.1
jreback/pandas
pandas/core/groupby/generic.py
1
64670
""" Define the SeriesGroupBy and DataFrameGroupBy classes that hold the groupby interfaces (and some implementations). These are user facing as the result of the ``df.groupby(...)`` operations, which here returns a DataFrameGroupBy object. """ from collections import abc, namedtuple import copy from functools import p...
bsd-3-clause
cloudera/ibis
ibis/backends/pandas/execution/generic.py
1
35498
"""Execution rules for generic ibis operations.""" import collections import datetime import decimal import functools import math import numbers import operator from collections.abc import Sized from typing import Optional import numpy as np import pandas as pd import toolz from pandas.api.types import DatetimeTZDtyp...
apache-2.0
BigDataforYou/movie_recommendation_workshop_1
big_data_4_you_demo_1/venv/lib/python2.7/site-packages/pandas/tests/series/test_analytics.py
1
67159
# coding=utf-8 # pylint: disable-msg=E1101,W0612 from itertools import product from distutils.version import LooseVersion import nose import random from numpy import nan import numpy as np import pandas as pd from pandas import (Series, DataFrame, isnull, notnull, bdate_range, date_range, _np_ve...
mit
gsnyder206/mock-surveys
CodeProject/5_Postprocess/hudfimagescript.py
1
34889
#### #### Name: hudfimagescript.py #### Author: Greg Snyder gsnyder@stsci.edu #### Purpose: The final step. Converts output of add_all_broadband_flux.py into PDF image files. #### Disclaimer: This code is provided AS-IS with absolutely NO warranty. #### It is largely meant as a guide rather than ide...
mit
bmazin/SDR
DataReadout/ChannelizerControls/channelizerSnap.py
1
46241
import sys, os, random, math, array, fractions from PyQt4.QtCore import * from PyQt4.QtGui import * import socket import matplotlib, corr, time, struct, numpy from bitstring import BitArray import matplotlib.pyplot as mpl from matplotlib.backends.backend_qt4agg import FigureCanvasQTAgg as FigureCanvas from matp...
gpl-2.0
MattNolanLab/ei-attractor
noisefigs/noisefigs/plotters/grids.py
1
63679
'''Figure plotters for grid field-related data. .. currentmodule:: noisefigs.plotters.grids Classes ------- .. autosummary:: GridSweepsPlotter GenericGridSweepsPlotter IPCGridSweepsPlotter IPCScatterPlotter IPCHistogramsPlotter IPCExamplePlotter IPCExampleColorbarPlotter GridExamples...
gpl-3.0
mrgloom/menpofit
menpofit/visualize/widgets/base.py
1
127304
import numpy as np from collections import OrderedDict import matplotlib.pyplot as plt from matplotlib import collections as mc import IPython.html.widgets as ipywidgets import IPython.display as ipydisplay from menpo.visualize.widgets import (RendererOptionsWidget, ChannelOptions...
bsd-3-clause
healpy/healpy
healpy/projaxes.py
1
44011
# # This file is part of Healpy. # # Healpy is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by # the Free Software Foundation; either version 2 of the License, or # (at your option) any later version. # # Healpy is distributed in the hope...
gpl-2.0
markgw/jazzparser
lib/nltk/probability.py
1
87458
# -*- coding: utf-8 -*- # Natural Language Toolkit: Probability and Statistics # # Copyright (C) 2001-2010 NLTK Project # Author: Edward Loper <edloper@gradient.cis.upenn.edu> # Steven Bird <sb@csse.unimelb.edu.au> (additions) # Trevor Cohn <tacohn@cs.mu.oz.au> (additions) # Peter Ljunglöf <pete...
gpl-3.0
jniediek/mne-python
mne/viz/_3d.py
3
43523
"""Functions to make 3D plots with M/EEG data """ from __future__ import print_function # Authors: Alexandre Gramfort <alexandre.gramfort@telecom-paristech.fr> # Denis Engemann <denis.engemann@gmail.com> # Martin Luessi <mluessi@nmr.mgh.harvard.edu> # Eric Larson <larson.eric.d@gmail.com> # ...
bsd-3-clause
zfrenchee/pandas
pandas/tests/indexes/period/test_ops.py
1
37592
import pytest import numpy as np import pandas as pd import pandas._libs.tslib as tslib import pandas.util.testing as tm import pandas.core.indexes.period as period from pandas import (DatetimeIndex, PeriodIndex, period_range, Series, Period, _np_version_under1p10, Index) from pandas.tests.test_b...
bsd-3-clause
BiaDarkia/scikit-learn
sklearn/linear_model/tests/test_logistic.py
1
50127
import numpy as np import scipy.sparse as sp from scipy import linalg, optimize, sparse from sklearn.datasets import load_iris, make_classification from sklearn.metrics import log_loss from sklearn.model_selection import StratifiedKFold from sklearn.preprocessing import LabelEncoder from sklearn.utils import compute_cl...
bsd-3-clause
mtustin-handy/airflow
airflow/www/views.py
1
74575
import sys import os import socket from functools import wraps from datetime import datetime, timedelta import dateutil.parser import copy from itertools import chain, product from past.utils import old_div from past.builtins import basestring import inspect import traceback import sqlalchemy as sqla from sqlalche...
apache-2.0
cjbrasher/LipidFinder
LipidFinder/Configuration/LFParametersGUI.py
1
38609
# Copyright (c) 2019 J. Alvarez-Jarreta and C.J. Brasher # # This file is part of the LipidFinder software tool and governed by the # 'MIT License'. Please see the LICENSE file that should have been # included as part of this software. """Graphical User Interface (GUI) to manage the parameters' collection. """ from co...
mit
clarkfitzg/xray
xray/test/test_dataset.py
1
84290
from copy import copy, deepcopy from textwrap import dedent try: import cPickle as pickle except ImportError: import pickle try: import dask.array as da except ImportError: pass import numpy as np import pandas as pd from xray import (align, concat, conventions, backends, Dataset, DataArray, ...
apache-2.0
JWarmenhoven/seaborn
seaborn/categorical.py
1
135340
from __future__ import division from textwrap import dedent import colorsys import numpy as np from scipy import stats import pandas as pd from pandas.core.series import remove_na import matplotlib as mpl from matplotlib.collections import PatchCollection import matplotlib.patches as Patches import matplotlib.pyplot as...
bsd-3-clause
louispotok/pandas
pandas/tests/scalar/period/test_period.py
1
51460
import pytest import pytz import numpy as np from datetime import datetime, date, timedelta import pandas as pd import pandas.util.testing as tm import pandas.core.indexes.period as period from pandas.compat import text_type, iteritems from pandas.compat.numpy import np_datetime64_compat from pandas._libs import tsl...
bsd-3-clause
thilbern/scikit-learn
sklearn/linear_model/tests/test_sgd.py
2
42269
import pickle import unittest import numpy as np import scipy.sparse as sp from sklearn.utils.testing import assert_array_equal from sklearn.utils.testing import assert_almost_equal from sklearn.utils.testing import assert_array_almost_equal from sklearn.utils.testing import assert_greater from sklearn.utils.testing ...
bsd-3-clause
sniemi/EuclidVisibleInstrument
sandbox/spotForwardModelGaussianApprox.py
1
72584
""" CCD Spot Measurements ===================== Analyse laboratory CCD PSF measurements by forward modelling. :requires: PyFITS :requires: NumPy :requires: SciPy :requires: astropy :requires: matplotlib :requires: VISsim-Python :requires: emcee :requires: sklearn :version: 1.1 :author: Sami-Matias Niemi :contact: s...
bsd-2-clause
dsm054/pandas
pandas/tests/series/test_missing.py
1
51794
# coding=utf-8 # pylint: disable-msg=E1101,W0612 from datetime import datetime, timedelta from distutils.version import LooseVersion import numpy as np from numpy import nan import pytest import pytz from pandas._libs.tslib import iNaT from pandas.compat import range from pandas.errors import PerformanceWarning impo...
bsd-3-clause
pligor/predicting-future-product-prices
04_time_series_prediction/models/model_27_price_history_mobattrs_date.py
1
44908
from __future__ import division import numpy as np import tensorflow as tf from cost_functions.huber_loss import huber_loss from data_providers.data_provider_27_price_history_mobattrs_date import PriceHistoryMobAttrsDateDataProvider from mylibs.batch_norm import BatchNormer, batchNormWrapper, fully_connected_layer_wit...
agpl-3.0
albertfxwang/grizli
grizli/multifit.py
1
180455
"""Functionality for manipulating multiple grism exposures simultaneously """ import os import time import glob from collections import OrderedDict import multiprocessing as mp import scipy.ndimage as nd import numpy as np import matplotlib.pyplot as plt from astropy.table import Table import astropy.io.fits as pyfi...
mit
majetideepak/arrow
python/pyarrow/tests/test_flight.py
1
30859
# -*- coding: utf-8 -*- # Licensed to the Apache Software Foundation (ASF) under one # or more contributor license agreements. See the NOTICE file # distributed with this work for additional information # regarding copyright ownership. The ASF licenses this file # to you under the Apache License, Version 2.0 (the # "...
apache-2.0
DailyActie/Surrogate-Model
01-codes/scikit-learn-master/sklearn/feature_extraction/text.py
1
50262
# -*- coding: utf-8 -*- # Authors: Olivier Grisel <olivier.grisel@ensta.org> # Mathieu Blondel <mathieu@mblondel.org> # Lars Buitinck <L.J.Buitinck@uva.nl> # Robert Layton <robertlayton@gmail.com> # Jochen Wersdörfer <jochen@wersdoerfer.de> # Roman Sinayev <roman.sinayev@gma...
mit
HaroldMills/Vesper
vesper/mpg_ranch/nfc_coarse_classifier_4_0/train_classifier.py
1
41082
""" Trains a Vesper coarse clip classifier. A coarse clip classifier is a binary classifier that tries to determine whether or not a clip contains a nocturnal flight call. """ from pathlib import Path import bisect import math import os import shutil import time from matplotlib.backends.backend_pdf import PdfPages ...
mit
AmedeoSapio/scapy
scapy/layers/inet.py
1
60349
## This file is part of Scapy ## See http://www.secdev.org/projects/scapy for more informations ## Copyright (C) Philippe Biondi <phil@secdev.org> ## This program is published under a GPLv2 license """ IPv4 (Internet Protocol v4). """ import os,time,struct,re,socket,new from select import select from collections impo...
gpl-2.0
gfyoung/pandas
pandas/core/dtypes/dtypes.py
1
40043
""" Define extension dtypes. """ from __future__ import annotations import re from typing import ( TYPE_CHECKING, Any, Dict, List, MutableMapping, Optional, Tuple, Type, Union, cast, ) import numpy as np import pytz from pandas._libs.interval import Interval from pandas._libs....
bsd-3-clause
joshfuchs/ZZCeti_pipeline
ReduceSpec_tools.py
1
57800
# -*- coding: utf-8 -*- """ Created on Sun Aug 23 20:48:10 2015 @author: jmeza """ # =========================================================================== # Packages ================================================================== # =========================================================================== ...
mit
titu1994/Neural-Style-Transfer
MRFNetwork.py
1
43994
from scipy.misc import imread, imresize, imsave from scipy.optimize import fmin_l_bfgs_b from sklearn.feature_extraction.image import reconstruct_from_patches_2d, extract_patches_2d import scipy.interpolate import scipy.ndimage import numpy as np import time import os import argparse import h5py from keras.models imp...
apache-2.0
MJuddBooth/pandas
pandas/tests/io/test_sql.py
1
99240
"""SQL io tests The SQL tests are broken down in different classes: - `PandasSQLTest`: base class with common methods for all test classes - Tests for the public API (only tests with sqlite3) - `_TestSQLApi` base class - `TestSQLApi`: test the public API with sqlalchemy engine - `TestSQLiteFallbackApi`: t...
bsd-3-clause
quiltdata/quilt
api/python/quilt3/formats.py
1
38941
""" formats.py This module handles binary formats, and conversion to/from objects. # FormatRegistry Class (singleton) The `FormatsRegistry` class acts as a global container for registered formats, and provides a place to register and discover formats. Formats may be discovered by: * metadata * file extensio...
apache-2.0
timothydmorton/coolkoi-radii
radiusfn.py
1
102986
#!/usr/bin/env python import os,sys,re,os.path,shutil,glob import pickle FPPDIR = '%s/FPP' % os.environ['DROPBOX'] RESULTSDIR = '%s/results/coolkois.txt.roboao' % FPPDIR #RESULTSDIR = '%s/results/coolkois.txt.nocc' % FPPDIR if sys.path[0] != FPPDIR: sys.path.insert(0,'%s/src' % FPPDIR) import numpy as np try: ...
mit
borismarin/genesis2.4gamma
Scripts/gpython-tools/netview.py
1
31381
#!/usr/bin/env python # Basic wxPython frame to hold a matplotlib figure for plotting # It defines some basic menu items with bindings to functions to execute import sys, os, glob, time, math, bz2 # import needed wxPython modules import wx import wx.html import wx.lib.dialogs from wx.lib.stattext import GenStaticTe...
gpl-2.0
fangohr/plot_vtk_matplotlib
plot_vtk_matplotlib/plot_vtk_matplotlib.py
1
39460
""" plot_vtk_matplotlib library for plotting VTK files in two dimensions using Matplotlib Authors: David Cortes, Hans Fangohr License: BSD, stated in the Github repository: https://github.com/fangohr/plot_vtk_matplotlib FUTURE IDEAS:: A 3D plot is also possible to do, but the plt.quiver() function is ...
bsd-2-clause
sclc/NAEF
exp_scripts/worker_exp_160614.py
1
33986
""" Experiment Diary 2016-06-14 """ import sys import math import matplotlib.pyplot as plt from scipy import io import numpy as np from scipy.sparse.linalg import * from scipy.sparse import * sys.path.append("../src/") from worker import Worker from native_conjugate_gradient import NativeConjugateGradient from native...
gpl-3.0
winklerand/pandas
pandas/tests/series/test_analytics.py
1
67663
# coding=utf-8 # pylint: disable-msg=E1101,W0612 from itertools import product from distutils.version import LooseVersion import pytest from numpy import nan import numpy as np import pandas as pd from pandas import (Series, Categorical, DataFrame, isna, notna, bdate_range, date_range, _np_versi...
bsd-3-clause
abhisg/scikit-learn
sklearn/preprocessing/data.py
1
66797
# Authors: Alexandre Gramfort <alexandre.gramfort@inria.fr> # Mathieu Blondel <mathieu@mblondel.org> # Olivier Grisel <olivier.grisel@ensta.org> # Andreas Mueller <amueller@ais.uni-bonn.de> # Eric Martin <eric@ericmart.in> # Giorgio Patrini <giorgio.patrini@anu.edu.au> # Lic...
bsd-3-clause
pslacerda/GromacsWrapper
gromacs/fileformats/xvg.py
1
49600
# -*- encoding: utf-8 -*- # GromacsWrapper: formats.py # Copyright (c) 2009-2012 Oliver Beckstein <orbeckst@gmail.com> # Released under the GNU Public License 3 (or higher, your choice) # See the file COPYING for details. """ Simple xmgrace XVG file format ============================== Gromacs produces graphs in the ...
gpl-3.0
NixaSoftware/CVis
venv/lib/python2.7/site-packages/pandas/tests/io/test_html.py
1
34259
from __future__ import print_function import glob import os import re import threading import warnings # imports needed for Python 3.x but will fail under Python 2.x try: from importlib import import_module, reload except ImportError: import_module = __import__ from distutils.version import LooseVersion i...
apache-2.0
tkcroat/Augerquant
Development/AES_tk_gui.py
1
32687
''' This is intended to be a plot interface w/ 1)filenumber/filename text string filter (allowing update of current Augerfile) 2) adjustable charging energy value, 3) comparison of data with plotted line energies (including shift), entry for element list? ''' import tkinter as tk from matplotlib.figure import Fi...
mit
silly-wacky-3-town-toon/SOURCE-COD
toontown/chat/WhiteListData.py
1
600424
WHITELIST = [ '', ' pages', '!', '"', '$', '$1', '$10', '$5', '%', '%s', '&', "'", "'boss", "'cause", "'course", "'ello", "'em", "'n", "'s", '(', '(:', '(=<', '(>^.^)>', ')', '):', ')=<', '*', '*scared', ...
apache-2.0
thirdwing/SFrame
oss_src/unity/python/sframe/test/test_sframe.py
1
122219
''' Copyright (C) 2015 Dato, Inc. All rights reserved. This software may be modified and distributed under the terms of the BSD license. See the LICENSE file for details. ''' # from nose import with_setup from ..data_structures.sframe import SFrame from ..data_structures.sarray import SArray from ..data_structures.ima...
bsd-3-clause
chrissly31415/amimanera
competition_scripts/plankton.py
1
41682
#!/usr/bin/python # coding: utf-8 #http://nbviewer.ipython.org/github/udibr/datasciencebowl/blob/master/141215-tutorial.ipynb #Import libraries for doing image analysis #http://www.pyimagesearch.com/2014/09/22/getting-started-deep-learning-python/ #mklhttp://verahill.blogspot.de/2013/06/465-intel-mkl-math-kernel-libr...
lgpl-3.0
remi-daigle/MarxanConnect
MarxanConnectGUI.py
1
153544
# importing wx files import wx import wx.lib.agw.aui as aui import wx.adv import wx.html2 # import matplotlib import matplotlib matplotlib.use('WXAgg') import matplotlib.pyplot as plt from matplotlib.backends.backend_wxagg import FigureCanvasWxAgg as FigureCanvas from matplotlib.collections import PatchCollection #...
mit
alephu5/Soundbyte
environment/lib/python3.3/site-packages/matplotlib/backends/backend_pgf.py
1
35328
import math import os import sys import re import shutil import tempfile import codecs import atexit import weakref import matplotlib as mpl from matplotlib.backend_bases import RendererBase, GraphicsContextBase,\ FigureManagerBase, FigureCanvasBase from matplotlib.backends.backend_mixed import MixedModeRenderer...
gpl-3.0
plotly/python-api
packages/python/plotly/plotly/graph_objs/sankey/_link.py
1
31636
from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType import copy as _copy class Link(_BaseTraceHierarchyType): # class properties # -------------------- _parent_path_str = "sankey" _path_str = "sankey.link" _valid_props = { "color", "colorscaledefault...
mit
chaluemwut/fbserver
venv/lib/python2.7/site-packages/sklearn/datasets/samples_generator.py
1
52427
""" Generate samples of synthetic data sets. """ # Authors: B. Thirion, G. Varoquaux, A. Gramfort, V. Michel, O. Grisel, # G. Louppe, J. Nothman # License: BSD 3 clause import numbers import warnings import numpy as np from scipy import linalg from ..preprocessing import MultiLabelBinarizer from ..utils imp...
apache-2.0
bmcage/stickproject
stick/pcm/pcmmodel.py
1
59568
# # Copyright (C) 2010 B. Malengier # Copyright (C) 2010 P.Li # # This program is free software; you can redistribute it and/or modify # it under the terms of the GNU General Public License as published by # the Free Software Foundation; either version 2 of the License, or # (at your option) any later version. # # Th...
gpl-2.0
jaeilepp/mne-python
mne/channels/channels.py
1
47704
# Authors: Alexandre Gramfort <alexandre.gramfort@telecom-paristech.fr> # Matti Hamalainen <msh@nmr.mgh.harvard.edu> # Denis Engemann <denis.engemann@gmail.com> # Andrew Dykstra <andrew.r.dykstra@gmail.com> # Teon Brooks <teon.brooks@gmail.com> # # License: BSD (3-clause) import os ...
bsd-3-clause
jeffseif/dogWalkScore
static/py/dogWalkScore.py
1
39621
#! /usr/bin/env python3 # Import from json import loads as JSONLoad from math import pi as pi,\ sin as Sine,\ cos as Cosine,\ acos as ArcCosine from os.path import exists as Exists from pickle import dump as Pickle,\ load as UnPickle import sys # M...
bsd-3-clause
cschenck/blender_sim
fluid_sim_deps/blender-2.69/2.69/python/lib/python3.3/site-packages/numpy/fft/fftpack.py
1
39280
""" Discrete Fourier Transforms Routines in this module: fft(a, n=None, axis=-1) ifft(a, n=None, axis=-1) rfft(a, n=None, axis=-1) irfft(a, n=None, axis=-1) hfft(a, n=None, axis=-1) ihfft(a, n=None, axis=-1) fftn(a, s=None, axes=None) ifftn(a, s=None, axes=None) rfftn(a, s=None, axes=None) irfftn(a, s=None, axes=None...
gpl-3.0
MikeDMorgan/proj036
src/pipeline_project036_timeseries.py
1
98331
################################################################################ # # MRC FGU Computational Genomics Group # # $Id: pipeline_snps.py 2870 2010-03-03 10:20:29Z andreas $ # # Copyright (C) 2009 Andreas Heger # # This program is free software; you can redistribute it and/or # modify it under the t...
mit
datapythonista/pandas
pandas/tests/series/test_constructors.py
1
64818
from collections import OrderedDict from datetime import ( datetime, timedelta, ) from dateutil.tz import tzoffset import numpy as np import numpy.ma as ma import pytest from pandas._libs import ( iNaT, lib, ) import pandas.util._test_decorators as td from pandas.core.dtypes.common import ( is_ca...
bsd-3-clause
wronk/mne-python
mne/label.py
1
77822
# Authors: Alexandre Gramfort <alexandre.gramfort@telecom-paristech.fr> # Martin Luessi <mluessi@nmr.mgh.harvard.edu> # Denis Engemann <denis.engemann@gmail.com> # # License: BSD (3-clause) from collections import defaultdict from colorsys import hsv_to_rgb, rgb_to_hsv from os import path as op impor...
bsd-3-clause
treycausey/scikit-learn
sklearn/linear_model/coordinate_descent.py
1
66995
# Author: Alexandre Gramfort <alexandre.gramfort@inria.fr> # Fabian Pedregosa <fabian.pedregosa@inria.fr> # Olivier Grisel <olivier.grisel@ensta.org> # Gael Varoquaux <gael.varoquaux@inria.fr> # # License: BSD 3 clause import sys import warnings from abc import ABCMeta, abstractmethod import n...
bsd-3-clause
m-rossi/matplotlib2tikz
tikzplotlib/_cleanfigure.py
1
42818
import matplotlib as mpl import mpl_toolkits import numpy as np from matplotlib import pyplot as plt from mpl_toolkits import mplot3d STEP_DRAW_STYLES = ["steps-pre", "steps-post", "steps-mid"] def clean_figure(fig=None, target_resolution=600, scale_precision=1.0): """Cleans figure as a preparation for tikz expo...
mit
samuelshaner/openmc
openmc/mgxs/mgxs.py
1
224815
from __future__ import division from collections import OrderedDict from numbers import Integral import warnings import os import sys import copy from abc import ABCMeta import itertools from six import add_metaclass, string_types import numpy as np import openmc import openmc.checkvalue as cv from openmc.tallies im...
mit
jameslao/QuantSoftwareToolkit
QSTK/qstktools/report.py
1
47947
''' (c) 2011, 2012 Georgia Tech Research Corporation This source code is released under the New BSD license. Please see http://wiki.quantsoftware.org/index.php?title=QSTK_License for license details. Created on Jan 1, 2011 @author:Drew Bratcher @contact: dbratcher@gatech.edu @summary: Contains tutorial for backteste...
bsd-3-clause
effigies/mne-python
mne/tests/test_epochs.py
1
50500
# Author: Alexandre Gramfort <alexandre.gramfort@telecom-paristech.fr> # Denis Engemann <denis.engemann@gmail.com> # # License: BSD (3-clause) import os.path as op from copy import deepcopy from nose.tools import (assert_true, assert_equal, assert_raises, assert_not_equal) from numpy....
bsd-3-clause
Pragmatismo/Pigrow
scripts/gui/test/system_pnl.py
1
87723
import wx import wx.lib.scrolledpanel as scrolled class ctrl_pnl(wx.Panel): # # def __init__( self, parent ): self.parent = parent shared_data = parent.shared_data print(self, dir(parent), " <----") wx.Panel.__init__ ( self, parent, id = wx.ID_ANY, style = wx.TAB_TRAVERSAL )...
gpl-3.0
cbertinato/pandas
pandas/core/strings.py
1
106721
import codecs from functools import wraps import re import textwrap from typing import Dict, List import warnings import numpy as np import pandas._libs.lib as lib import pandas._libs.ops as libops from pandas.util._decorators import Appender, deprecate_kwarg from pandas.core.dtypes.common import ( ensure_object...
bsd-3-clause
roshantha9/AbstractManycoreSim
src/libNoCModel/NoCSchedulabilityAnalysis.py
1
59438
import pprint import sys, os import numpy as np import time #import networkx as nx import simpy import matplotlib.pyplot as plt from datetime import timedelta, datetime ## local imports from SimParams import SimParams from libDebug.Debug import Debug, DebugCat from libNoCModel.NoCFlow import FlowType class NoCSchedu...
gpl-3.0
kbrannan/PyHSPF
src/pyhspf/forecasting/forecastplots.py
2
43195
# HSPF Model Plot Routines # # David J. Lampert, PhD, PE # # Last updated: 11/16/2013 # # Purpose: Lots of routines here to generate images for climate data for an HSPF # model. Descriptions below. # from scipy import stats, log10 from matplotlib import pyplot, path, patches, ticker from matplotlib....
bsd-3-clause
Winand/pandas
pandas/tests/series/test_indexing.py
1
88319
# coding=utf-8 # pylint: disable-msg=E1101,W0612 import pytest from datetime import datetime, timedelta from numpy import nan import numpy as np import pandas as pd import pandas._libs.index as _index from pandas.core.dtypes.common import is_integer, is_scalar from pandas import (Index, Series, DataFrame, isna, ...
bsd-3-clause
sauloal/cnidaria
scripts/venv/lib/python2.7/site-packages/pandas/core/index.py
1
201059
# pylint: disable=E1101,E1103,W0232 import datetime import warnings import operator from functools import partial from pandas.compat import range, zip, lrange, lzip, u, reduce, filter, map from pandas import compat import numpy as np from math import ceil from sys import getsizeof import pandas.tslib as tslib import ...
mit
davidwaroquiers/pymatgen
pymatgen/io/lammps/tests/test_data.py
1
45304
# coding: utf-8 # Copyright (c) Pymatgen Development Team. # Distributed under the terms of the MIT License. import gzip import json import os import random import unittest from collections import OrderedDict import numpy as np import pandas as pd from pymatgen import yaml from pymatgen.core.periodic_table import Ele...
mit
jajcayn/pyclits
pyclits/empirical_model.py
1
40015
""" created on Aug 21, 2016 @author: Nikola Jajcay, jajcay(at)cs.cas.cz last update on Sep 22, 2017 Based on Kondrashov D., Kravtsov S., Robertson A. W. and Ghil M., J. Climate, 18, 2005. """ import numpy as np import scipy.stats as sts from pyclits.functions import cross_correlation, kdensity_estimate from pyclit...
mit
openfisca/openfisca-qt
openfisca_qt/scripts/victor/debugger.py
1
40972
# -*- coding:utf-8 -*- # Created on 5 juil. 2013 # This file is part of OpenFisca. # OpenFisca is a socio-fiscal microsimulation software # Copyright ©2013 Clément Schaff, Mahdi Ben Jelloul # Licensed under the terms of the GVPLv3 or later license # (see openfisca/__init__.py for details) # Author: Victor Le Breton ...
agpl-3.0
rs2/pandas
pandas/tests/frame/test_query_eval.py
1
47565
from io import StringIO import operator import numpy as np import pytest import pandas.util._test_decorators as td import pandas as pd from pandas import DataFrame, Index, MultiIndex, Series, date_range import pandas._testing as tm from pandas.core.computation.check import NUMEXPR_INSTALLED PARSERS = "python", "pan...
bsd-3-clause
jos4uke/getSeqFlankBlatHit
lib/python2.7/site-packages/pybedtools/test/test1.py
1
47373
import pybedtools import os, difflib, sys from textwrap import dedent from nose import with_setup from nose.tools import assert_raises, raises from pybedtools.helpers import BEDToolsError from pybedtools import featurefuncs from tfuncs import setup, teardown, testdir, test_tempdir, unwriteable def fix(x): """ ...
gpl-2.0
OzFlux/PyFluxPro
scripts/pfp_cpd_mcnew.py
1
37606
# Python modules #import datetime import logging import os # 3rd party modules import numpy as np import pandas as pd from scipy import stats from scipy.interpolate import PchipInterpolator import xarray as xr # PFP modules from scripts import pfp_utils # get the logger logger = logging.getLogger("pfp_log") #--------...
bsd-3-clause
ryfeus/lambda-packs
Pandas_numpy/source/pandas/core/series.py
1
107829
""" Data structure for 1-dimensional cross-sectional and time series data """ from __future__ import division # pylint: disable=E1101,E1103 # pylint: disable=W0703,W0622,W0613,W0201 import types import warnings from textwrap import dedent import numpy as np import numpy.ma as ma from pandas.core.dtypes.common impor...
mit
sebotic/cdk_pywrapper
cdk_pywrapper/chemlib.py
1
56337
import requests import sys import simplejson import time import re import wikidataintegrator.wdi_core as wdi_core import wikidataintegrator.wdi_login as wdi_login import pprint import pandas as pd import numpy as np import os import chemspipy # sys.path.append('/home/sebastian/PycharmProjects/cdk_pywrapper/') from cdk...
agpl-3.0
abinit/abinit
fkiss/project.py
1
53462
# coding: utf-8 """ """ from __future__ import print_function, division, unicode_literals, absolute_import import os import sys import io import re import time import shutil import pickle import difflib from collections import OrderedDict, defaultdict from textwrap import TextWrapper from pprint import pprint, pforma...
gpl-3.0
zohannn/motion_manager
scripts/old/task_2_reaching/var_1/training_task_2_var_1_10k.py
1
299691
#!/usr/bin/env python3 import sys import pandas as pd import sklearn from sklearn import decomposition from IPython import display import seaborn as sns import matplotlib.pyplot as plt from mpl_toolkits.mplot3d import Axes3D # sklearn from sklearn.cluster import KMeans from sklearn import metrics from sklearn impo...
mit
rothadamg/UPSITE
LSA_2.py
1
35021
''' Created on Oct 8, 2014 @author: agr9 ''' from numpy import zeros from scipy.linalg import svd #following needed for TFIDF from math import log from numpy import asarray, sum from sklearn.metrics.pairwise import cosine_similarity from sklearn.metrics.pairwise import linear_kernel import math #=====...
mit
kdebrab/pandas
pandas/tests/test_resample.py
1
135218
# pylint: disable=E1101 from warnings import catch_warnings from datetime import datetime, timedelta from functools import partial from textwrap import dedent from operator import methodcaller import pytz import pytest import dateutil import numpy as np from pandas._libs.tslibs.period import IncompatibleFrequency fr...
bsd-3-clause
DeviceTestFramework/dtest
dtest/report_gen.py
1
42678
# # Copyright (C) 2015 Prevas A/S # # This file is part of dtest, an embedded device test framework # # dtest is free software; you can redistribute it and/or modify it under the # terms of the GNU Lesser General Public License as published by the Free # Software Foundation; either version 2.1 of the License, or (at yo...
gpl-2.0
kutakieu/tensorflow-wavenet
test/test_model.py
1
43943
"""Unit tests for the WaveNet that check that it can train on audio data.""" import json import numpy as np import sys import tensorflow as tf import random import os import matplotlib.pyplot as plt import librosa from scipy import signal import pickle from wavenet import (WaveNetModel, time_to_batch, batch_to_time, c...
mit
steinnymir/RegAscope2017
lib/redred.py
1
38349
# -*- coding: utf-8 -*- """ Created on Tue Apr 25 14:11:19 2017 @author: sagustss """ #%% Import modules import numpy as np import scipy as sp import scipy.signal as spsignal import pickle import csv import os import matplotlib.pyplot as plt from mpl_toolkits.mplot3d import axes3d, Axes3D #other from datetime impo...
mit