repo_name string | path string | copies string | size string | content string | license string |
|---|---|---|---|---|---|
IshankGulati/scikit-learn | sklearn/feature_extraction/text.py | 19 | 52042 | # -*- coding: utf-8 -*-
# Authors: Olivier Grisel <olivier.grisel@ensta.org>
# Mathieu Blondel <mathieu@mblondel.org>
# Lars Buitinck
# Robert Layton <robertlayton@gmail.com>
# Jochen Wersdörfer <jochen@wersdoerfer.de>
# Roman Sinayev <roman.sinayev@gmail.com>
#
# License: B... | bsd-3-clause |
cython-testbed/pandas | pandas/io/json/json.py | 3 | 33520 | # pylint: disable-msg=E1101,W0613,W0603
from itertools import islice
import os
import numpy as np
import pandas._libs.json as json
from pandas._libs.tslibs import iNaT
from pandas.compat import StringIO, long, u, to_str
from pandas import compat, isna
from pandas import Series, DataFrame, to_datetime, MultiIndex
from ... | bsd-3-clause |
endolith/scipy | scipy/stats/_multivariate.py | 5 | 153946 | #
# Author: Joris Vankerschaver 2013
#
import math
import numpy as np
from numpy import asarray_chkfinite, asarray
import scipy.linalg
from scipy._lib import doccer
from scipy.special import gammaln, psi, multigammaln, xlogy, entr, betaln
from scipy._lib._util import check_random_state
from scipy.linalg.blas import dro... | bsd-3-clause |
energyPATHWAYS/energyPATHWAYS | model_building_tools/scenario_builder/scenario_builder.py | 1 | 60144 | # -*- coding: utf-8 -*-
# WARNING: If you try to import something that isn't in your python path,
# xlwings will fail silently when called from Excel (at least on Excel 2016 for Mac)!
import os
import subprocess
import traceback
import json
import string
from datetime import datetime
import platform
import xlwings as ... | mit |
sem-geologist/hyperspy | hyperspy/_signals/lazy.py | 3 | 36898 | # -*- coding: utf-8 -*-
# Copyright 2007-2016 The HyperSpy developers
#
# This file is part of HyperSpy.
#
# HyperSpy is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at... | gpl-3.0 |
YinongLong/scikit-learn | sklearn/metrics/classification.py | 1 | 71650 | """Metrics to assess performance on classification task given class prediction
Functions named as ``*_score`` return a scalar value to maximize: the higher
the better
Function named as ``*_error`` or ``*_loss`` return a scalar value to minimize:
the lower the better
"""
# Authors: Alexandre Gramfort <alexandre.gramf... | bsd-3-clause |
clarkfitzg/xray | xray/test/test_variable.py | 2 | 35943 | from collections import namedtuple
from copy import copy, deepcopy
from datetime import datetime, timedelta
from textwrap import dedent
from distutils.version import LooseVersion
import numpy as np
import pandas as pd
from xray import Variable, Dataset, DataArray
from xray.core import indexing
from xray.core.variable... | apache-2.0 |
LiaoPan/scikit-learn | sklearn/decomposition/dict_learning.py | 83 | 44062 | """ Dictionary learning
"""
from __future__ import print_function
# Author: Vlad Niculae, Gael Varoquaux, Alexandre Gramfort
# License: BSD 3 clause
import time
import sys
import itertools
from math import sqrt, ceil
import numpy as np
from scipy import linalg
from numpy.lib.stride_tricks import as_strided
from ..b... | bsd-3-clause |
rgommers/scipy | scipy/signal/filter_design.py | 7 | 179656 | """Filter design."""
import math
import operator
import warnings
import numpy
import numpy as np
from numpy import (atleast_1d, poly, polyval, roots, real, asarray,
resize, pi, absolute, logspace, r_, sqrt, tan, log10,
arctan, arcsinh, sin, exp, cosh, arccosh, ceil, conjugate,
... | bsd-3-clause |
SiLab-Bonn/testbeam_analysis | testbeam_analysis/result_analysis.py | 1 | 88746 | ''' All functions creating results (e.g. efficiency, residuals, track density) from fitted tracks are listed here.'''
from __future__ import division
import logging
import re
from collections import Iterable
import os.path
import tables as tb
import numpy as np
from matplotlib.backends.backend_pdf import PdfPages
fro... | mit |
CalebBell/ht | tests/test_conv_tube_bank.py | 1 | 66185 | # -*- coding: utf-8 -*-
'''Chemical Engineering Design Library (ChEDL). Utilities for process modeling.
Copyright (C) 2016, 2017 Caleb Bell <Caleb.Andrew.Bell@gmail.com>
Permission is hereby granted, free of charge, to any person obtaining a copy
of this software and associated documentation files (the "Software"), to... | mit |
Windy-Ground/scikit-learn | sklearn/linear_model/tests/test_logistic.py | 59 | 35368 | import numpy as np
import scipy.sparse as sp
from scipy import linalg, optimize, sparse
import scipy
from sklearn.utils.testing import assert_almost_equal
from sklearn.utils.testing import assert_array_equal
from sklearn.utils.testing import assert_array_almost_equal
from sklearn.utils.testing import assert_equal
from... | bsd-3-clause |
karllessard/tensorflow | tensorflow/python/keras/engine/data_adapter_test.py | 2 | 43498 | # Copyright 2019 The TensorFlow Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applica... | apache-2.0 |
anntzer/scikit-learn | sklearn/model_selection/_search_successive_halving.py | 3 | 40300 | from math import ceil, floor, log
from abc import abstractmethod
from numbers import Integral
import numpy as np
from ._search import _check_param_grid
from ._search import BaseSearchCV
from . import ParameterGrid, ParameterSampler
from ..utils.validation import _num_samples
from ..base import is_classifier
from ._spl... | bsd-3-clause |
Juanlu001/xlwings | xlwings/main.py | 1 | 67142 | """
xlwings - Make Excel fly with Python!
Homepage and documentation: http://xlwings.org
See also: http://zoomeranalytics.com
Copyright (C) 2014-2016, Zoomer Analytics LLC.
All rights reserved.
License: BSD 3-clause (see LICENSE.txt for details)
"""
import os
import sys
import re
import numbers
import itertools
impo... | apache-2.0 |
tturowski/gwide | gwide/Classes/tRNAFromConcatv2.py | 1 | 65364 | #!/usr/bin/env python
import numpy as np
import sys, collections, re
from pypeaks import Data
from pyCRAC.Parsers import GTF2
import matplotlib.pyplot as plt
import pandas as pd
# import seaborn
class tRNAFromConcatv2():
def __init__(self, gtf_file, five_prime_flank, three_prime_flank, hits_threshold, lookahead, ... | apache-2.0 |
elkingtonmcb/nupic | external/linux32/lib/python2.6/site-packages/matplotlib/colors.py | 69 | 31676 | """
A module for converting numbers or color arguments to *RGB* or *RGBA*
*RGB* and *RGBA* are sequences of, respectively, 3 or 4 floats in the
range 0-1.
This module includes functions and classes for color specification
conversions, and for mapping numbers to colors in a 1-D array of
colors called a colormap. Color... | agpl-3.0 |
sem-geologist/hyperspy | hyperspy/roi.py | 2 | 47245 | # -*- coding: utf-8 -*-
# Copyright 2007-2016 The HyperSpy developers
#
# This file is part of HyperSpy.
#
# HyperSpy is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at y... | gpl-3.0 |
lthurlow/Network-Grapher | proj/external/matplotlib-1.2.1/build/lib.linux-i686-2.7/matplotlib/axes.py | 2 | 324939 | from __future__ import division, print_function
import math, sys, warnings, datetime
from operator import itemgetter
import itertools
import numpy as np
from numpy import ma
import matplotlib
rcParams = matplotlib.rcParams
import matplotlib.artist as martist
from matplotlib.artist import allow_rasterization
import m... | mit |
wwf5067/statsmodels | statsmodels/iolib/summary.py | 8 | 34185 | from statsmodels.compat.python import range, lrange, lmap, lzip, zip_longest
import numpy as np
from statsmodels.iolib.table import SimpleTable
from statsmodels.iolib.tableformatting import (gen_fmt, fmt_2,
fmt_params, fmt_base, fmt_2cols)
#from statsmodels.iolib.summary2... | bsd-3-clause |
jgbarah/revisor | report.py | 1 | 45149 | #! /usr/bin/python
# -*- coding: utf-8 -*-
## Copyright (C) 2014 Bitergia
##
## This program is free software; you can redistribute it and/or modify
## it under the terms of the GNU General Public License as published by
## the Free Software Foundation; either version 3 of the License, or
## (at your option) any later... | gpl-3.0 |
mortonjt/scipy | scipy/cluster/tests/test_hierarchy.py | 26 | 35159 | #! /usr/bin/env python
#
# Author: Damian Eads
# Date: April 17, 2008
#
# Copyright (C) 2008 Damian Eads
#
# Redistribution and use in source and binary forms, with or without
# modification, are permitted provided that the following conditions
# are met:
#
# 1. Redistributions of source code must retain the above copy... | bsd-3-clause |
albertoferna/compmech | compmech/conecyl/conecyl.py | 1 | 87599 | from __future__ import division
import gc
import os
import sys
import traceback
from collections import Iterable
import time
import cPickle
import __main__
import numpy as np
from scipy.sparse import coo_matrix, csr_matrix, csc_matrix
from scipy.sparse.linalg import eigsh
from scipy.optimize import leastsq
from numpy ... | bsd-3-clause |
paladin74/neural-network-animation | matplotlib/path.py | 10 | 36297 | """
A module for dealing with the polylines used throughout matplotlib.
The primary class for polyline handling in matplotlib is :class:`Path`.
Almost all vector drawing makes use of Paths somewhere in the drawing
pipeline.
Whilst a :class:`Path` instance itself cannot be drawn, there exists
:class:`~matplotlib.artis... | mit |
larsoner/mne-python | mne/decoding/csp.py | 3 | 34992 | # -*- coding: utf-8 -*-
# Authors: Romain Trachel <trachelr@gmail.com>
# Alexandre Gramfort <alexandre.gramfort@inria.fr>
# Alexandre Barachant <alexandre.barachant@gmail.com>
# Clemens Brunner <clemens.brunner@gmail.com>
# Jean-Remi King <jeanremi.king@gmail.com>
#
# License: BSD (3... | bsd-3-clause |
Erotemic/ubelt | ubelt/util_format.py | 1 | 40528 | # -*- coding: utf-8 -*-
"""
Defines the function :func:`repr2`, which allows for a bit more customization
than :func:`repr` or :func:`pprint`. See the docstring for more details.
Two main goals of repr2 are to provide nice string representations of nested
data structures and make those "eval-able" whenever possible. ... | apache-2.0 |
followyourheart/SFrame | oss_src/unity/python/sframe/test/test_sarray.py | 8 | 67699 | # -*- coding: utf-8 -*-
'''
Copyright (C) 2015 Dato, Inc.
All rights reserved.
This software may be modified and distributed under the terms
of the BSD license. See the LICENSE file for details.
'''
from ..data_structures.sarray import SArray
from ..util.timezone import GMT
import pandas as pd
import numpy as np
impo... | bsd-3-clause |
wlamond/scikit-learn | sklearn/model_selection/tests/test_validation.py | 7 | 42247 | """Test the validation module"""
from __future__ import division
import sys
import warnings
import tempfile
import os
from time import sleep
import numpy as np
from scipy.sparse import coo_matrix, csr_matrix
from sklearn.utils.testing import assert_true
from sklearn.utils.testing import assert_false
from sklearn.uti... | bsd-3-clause |
clemkoa/scikit-learn | sklearn/ensemble/forest.py | 1 | 78779 | """Forest of trees-based ensemble methods
Those methods include random forests and extremely randomized trees.
The module structure is the following:
- The ``BaseForest`` base class implements a common ``fit`` method for all
the estimators in the module. The ``fit`` method of the base ``Forest``
class calls the ... | bsd-3-clause |
shishaochen/TensorFlow-0.8-Win | tensorflow/contrib/learn/python/learn/estimators/base.py | 1 | 40162 | """Base estimator class."""
# Copyright 2015-present The Scikit Flow Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LIC... | apache-2.0 |
evodify/genomic-analyses_in_apache-spark | vcf_filtering_tutorial/Genomics&Spark.py | 1 | 31681 | # Databricks notebook source
# MAGIC %md # Processing genomic data in Spark
# MAGIC
# MAGIC *You can import this notebook from [here](https://github.com/evodify/genomic-analyses_in_apache-spark/tree/master/vcf_filtering_tutorial).*
# MAGIC
# MAGIC ## [Big Data: Astronomical or Genomical?](http://journals.plos.org/plo... | mit |
cloudera/hue | desktop/core/ext-py/openpyxl-2.6.4/openpyxl/styles/builtins.py | 2 | 31221 | from __future__ import absolute_import
# Copyright (c) 2010-2019 openpyxl
# Builtins styles as defined in Part 4 Annex G.2
from .named_styles import NamedStyle
from openpyxl.xml.functions import fromstring
normal = """
<namedStyle builtinId="0" name="Normal">
<alignment/>
<border>
<left/>
<rig... | apache-2.0 |
admed/molgears | widgets/read_result.py | 1 | 56114 | # -*- coding: utf-8 -*-
import xlrd
from datetime import datetime
from numpy import array
from math import log10
def read_fullplate(filepath, concs):
from math import fabs
workbook = xlrd.open_workbook(filepath)
worksheet = workbook.sheet_by_index(0)
date_cell = worksheet.cell_value(28, 1)
if date_... | bsd-3-clause |
mehdidc/scikit-learn | sklearn/utils/estimator_checks.py | 1 | 40346 | from __future__ import print_function
import warnings
import sys
import traceback
import inspect
import pickle
from copy import deepcopy
import numpy as np
from scipy import sparse
import struct
from sklearn.externals.six.moves import zip
from sklearn.externals.joblib import hash
from sklearn.utils.testing import as... | bsd-3-clause |
HBNLdev/DataStore | db/file_handling.py | 1 | 51898 | '''Handling HBNL files
'''
import os
import shutil
import subprocess
from collections import OrderedDict
from datetime import datetime
import h5py
import numpy as np
import pandas as pd
import db.database as D
from .utils.compilation import join_allcols, extract_session_fromuID, join_ufields, column_split
from .util... | gpl-3.0 |
mikebenfield/scikit-learn | sklearn/metrics/pairwise.py | 28 | 46720 | # -*- coding: utf-8 -*-
# Authors: Alexandre Gramfort <alexandre.gramfort@inria.fr>
# Mathieu Blondel <mathieu@mblondel.org>
# Robert Layton <robertlayton@gmail.com>
# Andreas Mueller <amueller@ais.uni-bonn.de>
# Philippe Gervais <philippe.gervais@inria.fr>
# Lars Buitinck
... | bsd-3-clause |
eggimasv/EcoDen | Python_Files/functions_EcoDen.py | 1 | 101952 | # ======================================================================================
# Copyright 2016 Swiss Federal Institute of Aquatic Science and Technology
#
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free ... | lgpl-3.0 |
sergiopasra/numina | numina/array/display/ximshow.py | 3 | 34038 | #
# Copyright 2015-2021 Universidad Complutense de Madrid
#
# This file is part of Numina
#
# SPDX-License-Identifier: GPL-3.0+
# License-Filename: LICENSE.txt
#
import argparse
from astropy.io import fits
import numpy as np
import re
from .matplotlib_qt import set_window_geometry
from .pause_debugplot import pause_d... | gpl-3.0 |
nelango/ViralityAnalysis | model/lib/nltk/parse/transitionparser.py | 3 | 31227 | # Natural Language Toolkit: Arc-Standard and Arc-eager Transition Based Parsers
#
# Author: Long Duong <longdt219@gmail.com>
#
# Copyright (C) 2001-2015 NLTK Project
# URL: <http://nltk.org/>
# For license information, see LICENSE.TXT
from __future__ import absolute_import
from __future__ import division
from __future... | mit |
marius311/cosmoslik | cosmoslik/chains.py | 1 | 36828 | """
Python module for dealing with MCMC chains.
Contains utilities to:
* Load chains in a variety of formats
* Compute statistics (mean, std-dev, conf intervals, ...)
* Plot 1- and 2-d distributions of one or multiple parameters.
* Post-process chains
"""
import os, sys, re
from numpy import *
from numpy.linalg ... | gpl-3.0 |
theoryno3/scikit-learn | sklearn/preprocessing/tests/test_data.py | 3 | 35967 | import warnings
import numpy as np
import numpy.linalg as la
from scipy import sparse
from distutils.version import LooseVersion
from sklearn.utils.testing import assert_almost_equal, clean_warning_registry
from sklearn.utils.testing import assert_array_almost_equal
from sklearn.utils.testing import assert_array_equal... | bsd-3-clause |
yejingxin/PyKrige | pykrige/ok3d.py | 1 | 33404 | __doc__ = """Code by Benjamin S. Murphy
bscott.murphy@gmail.com
Dependencies:
numpy
scipy
matplotlib
Classes:
OrdinaryKriging3D: Support for 3D Ordinary Kriging.
References:
P.K. Kitanidis, Introduction to Geostatistcs: Applications in Hydrogeology,
(Cambridge University Press, 1997) 272 p.
... | bsd-3-clause |
lizardsystem/lizard-measure | lizard_measure/views.py | 1 | 36112 | # (c) Nelen & Schuurmans. GPL licensed, see LICENSE.txt.
import json
import logging
import datetime
import math
import iso8601
from django.db.models.query_utils import Q
from django.shortcuts import get_object_or_404
from django.shortcuts import render_to_response
from django.template import RequestContext
from dj... | gpl-3.0 |
kvasukib/groupflow_simulator | groupflow_scripts/tree_aggregation_simulations/tree_aggregation_bidirectional.py | 2 | 31709 | from scipy.stats import truncnorm, tstd, poisson, expon
from numpy.random import randint, uniform
from datetime import datetime
from collections import defaultdict
from sets import Set
from heapq import heappop, heappush
from time import time
from scipy.cluster.hierarchy import *
from scipy.spatial.distance import pdi... | apache-2.0 |
shujaatak/UAV_MissionPlanner | Lib/site-packages/numpy/lib/npyio.py | 53 | 59490 | __all__ = ['savetxt', 'loadtxt', 'genfromtxt', 'ndfromtxt', 'mafromtxt',
'recfromtxt', 'recfromcsv', 'load', 'loads', 'save', 'savez',
'savez_compressed', 'packbits', 'unpackbits', 'fromregex', 'DataSource']
import numpy as np
import format
import sys
import os
import sys
import itertools
import ... | gpl-2.0 |
ammarkhann/FinalSeniorCode | lib/python2.7/site-packages/scipy/optimize/_lsq/least_squares.py | 27 | 37725 | """Generic interface for least-square minimization."""
from __future__ import division, print_function, absolute_import
from warnings import warn
import numpy as np
from numpy.linalg import norm
from scipy.sparse import issparse, csr_matrix
from scipy.sparse.linalg import LinearOperator
from scipy.optimize import _m... | mit |
YihaoLu/statsmodels | statsmodels/emplike/descriptive.py | 19 | 38795 | """
Empirical likelihood inference on descriptive statistics
This module conducts hypothesis tests and constructs confidence
intervals for the mean, variance, skewness, kurtosis and correlation.
If matplotlib is installed, this module can also generate multivariate
confidence region plots as well as mean-variance con... | bsd-3-clause |
blueburningcoder/nupic | external/linux32/lib/python2.6/site-packages/matplotlib/backend_bases.py | 69 | 69740 | """
Abstract base classes define the primitives that renderers and
graphics contexts must implement to serve as a matplotlib backend
:class:`RendererBase`
An abstract base class to handle drawing/rendering operations.
:class:`FigureCanvasBase`
The abstraction layer that separates the
:class:`matplotlib.fi... | agpl-3.0 |
ARudiuk/mne-python | mne/viz/evoked.py | 1 | 48115 | """Functions to make simple plot on evoked M/EEG data (besides topographies)
"""
from __future__ import print_function
# Authors: Alexandre Gramfort <alexandre.gramfort@telecom-paristech.fr>
# Denis Engemann <denis.engemann@gmail.com>
# Martin Luessi <mluessi@nmr.mgh.harvard.edu>
# Eric Lars... | bsd-3-clause |
fitermay/intellij-community | python/helpers/pydev/pydevd.py | 3 | 63162 | '''
Entry point module (keep at root):
This module starts the debugger.
'''
from __future__ import nested_scopes # Jython 2.1 support
import atexit
import os
import sys
import traceback
from _pydevd_bundle.pydevd_constants import IS_JYTH_LESS25, IS_PY3K, IS_PY34_OLDER, get_thread_id, dict_keys, dict_pop, dict_conta... | apache-2.0 |
JohannesBuchner/PLUTO | Tools/pyPLUTO/bin/GUI_pyPLUTO.py | 3 | 36620 | #!/usr/bin/env python
import matplotlib
matplotlib.use('TkAgg')
from numpy import arange, sin, pi,log10,max,min,cos,isnan, meshgrid,sqrt,abs
from matplotlib.backends.backend_tkagg import FigureCanvasTkAgg,NavigationToolbar2TkAgg
from matplotlib.figure import Figure
import pyPLUTO as pp
import string
import time
fro... | gpl-2.0 |
LukeC92/iris | lib/iris/tests/__init__.py | 2 | 45559 | # (C) British Crown Copyright 2010 - 2017, Met Office
#
# This file is part of Iris.
#
# Iris is free software: you can redistribute it and/or modify it under
# the terms of the GNU Lesser General Public License as published by the
# Free Software Foundation, either version 3 of the License, or
# (at your option) any l... | lgpl-3.0 |
mnori/foldatlas | foldatlas/importers.py | 1 | 44199 | import settings
import models
from models import Strain, Gene, Transcript, Feature, \
GeneLocation, NucleotideMeasurementRun, StructurePredictionRun, NucleotideMeasurementSet, \
Structure, RawReactivities, RawReplicateCounts, values_str_unpack_float, Bppm
from utils import Timeline
from database import engine,... | mit |
jjhelmus/scipy | scipy/optimize/nonlin.py | 11 | 46689 | r"""
Nonlinear solvers
-----------------
.. currentmodule:: scipy.optimize
This is a collection of general-purpose nonlinear multidimensional
solvers. These solvers find *x* for which *F(x) = 0*. Both *x*
and *F* can be multidimensional.
Routines
~~~~~~~~
Large-scale nonlinear solvers:
.. autosummary::
newto... | bsd-3-clause |
vortex-ape/scikit-learn | sklearn/linear_model/stochastic_gradient.py | 2 | 64475 | # Authors: Peter Prettenhofer <peter.prettenhofer@gmail.com> (main author)
# Mathieu Blondel (partial_fit support)
#
# License: BSD 3 clause
"""Classification and regression using Stochastic Gradient Descent (SGD)."""
import numpy as np
import warnings
from abc import ABCMeta, abstractmethod
from ..utils im... | bsd-3-clause |
mjudsp/Tsallis | sklearn/ensemble/forest.py | 1 | 64666 | """Forest of trees-based ensemble methods
Those methods include random forests and extremely randomized trees.
The module structure is the following:
- The ``BaseForest`` base class implements a common ``fit`` method for all
the estimators in the module. The ``fit`` method of the base ``Forest``
class calls the ... | bsd-3-clause |
McDermott-Group/LabRAD | LabRAD/TestScripts/fpgaTest/pyle/build/lib/pyle/dataking/automateDaily.py | 2 | 41937 | from datetime import datetime
import itertools
import matplotlib.pyplot as plt
from mpl_toolkits.mplot3d import Axes3D
import numpy as np
from scipy.optimize import leastsq, fsolve
import time
import random
import labrad
from labrad.units import Unit
ns, us, GHz, MHz = [Unit(s) for s in ('ns', 'us', 'GHz', 'MHz')]
f... | gpl-2.0 |
person142/scipy | scipy/spatial/kdtree.py | 4 | 38301 | # Copyright Anne M. Archibald 2008
# Released under the scipy license
import numpy as np
from heapq import heappush, heappop
import scipy.sparse
__all__ = ['minkowski_distance_p', 'minkowski_distance',
'distance_matrix',
'Rectangle', 'KDTree']
def minkowski_distance_p(x, y, p=2):
"""
Co... | bsd-3-clause |
ElDeveloper/scikit-learn | sklearn/ensemble/tests/test_forest.py | 3 | 41612 | """
Testing for the forest module (sklearn.ensemble.forest).
"""
# Authors: Gilles Louppe,
# Brian Holt,
# Andreas Mueller,
# Arnaud Joly
# License: BSD 3 clause
import pickle
from collections import defaultdict
from itertools import combinations
from itertools import product
import numpy ... | bsd-3-clause |
pratapvardhan/pandas | pandas/tests/reshape/test_pivot.py | 2 | 81063 | # -*- coding: utf-8 -*-
from datetime import datetime, date, timedelta
import pytest
import numpy as np
from collections import OrderedDict
import pandas as pd
from pandas import (DataFrame, Series, Index, MultiIndex,
Grouper, date_range, concat, Categorical)
from pandas.core.reshape.pivot impo... | bsd-3-clause |
joshloyal/scikit-learn | sklearn/linear_model/tests/test_logistic.py | 18 | 41552 | import numpy as np
import scipy.sparse as sp
from scipy import linalg, optimize, sparse
from sklearn.utils.testing import assert_almost_equal
from sklearn.utils.testing import assert_array_equal
from sklearn.utils.testing import assert_array_almost_equal
from sklearn.utils.testing import assert_equal
from sklearn.util... | bsd-3-clause |
timbalam/GroopM | groopm/plot.py | 1 | 51299 | #!/usr/bin/env python
###############################################################################
# #
# plot.py #
# ... | gpl-3.0 |
aslihandincer/ibis | docs/sphinxext/ipython_sphinxext/ipython_directive.py | 9 | 37645 | # -*- coding: utf-8 -*-
"""
Sphinx directive to support embedded IPython code.
This directive allows pasting of entire interactive IPython sessions, prompts
and all, and their code will actually get re-executed at doc build time, with
all prompts renumbered sequentially. It also allows you to input code as a pure
pyth... | apache-2.0 |
kanchenxi04/vnpy-app | vn.trader/ctaAlgo/strategy_TripleMa_v0.3.py | 1 | 32295 | # encoding: UTF-8
# 首先写系统内置模块
from datetime import datetime, timedelta, date
from time import sleep
# 其次，导入vnpy的基础模块
import sys
sys.path.append('C:\\vnpy-master\\vnpy-master\\vn.trader')
from vtConstant import EMPTY_STRING, EMPTY_INT, DIRECTION_LONG, DIRECTION_SHORT, OFFSET_OPEN, STATUS_CANCELLED, EMPTY_FLOA... | mit |
bobbymckinney/seebeck_measurement | old versions/Seebeck_HighTemp_CMDLine.py | 1 | 34381 | #! /usr/bin/python
# -*- coding: utf-8 -*-
"""
Created: 2016-02-09
@author: Bobby McKinney (bobbymckinney@gmail.com)
"""
import os
import numpy as np
import matplotlib.pyplot as plt
import minimalmodbus as modbus # For communicating with the cn7500s
import omegacn7500 # Driver for cn7500s under minimalmodbus, adds a fe... | gpl-3.0 |
ammarkhann/FinalSeniorCode | lib/python2.7/site-packages/pandas/core/resample.py | 3 | 44151 | from datetime import timedelta
import numpy as np
import warnings
import copy
from textwrap import dedent
import pandas as pd
from pandas.core.base import AbstractMethodError, GroupByMixin
from pandas.core.groupby import (BinGrouper, Grouper, _GroupBy, GroupBy,
SeriesGroupBy, groupby,... | mit |
blockstack/pybitcoin | pybitcoin/passphrases/english_words.py | 2 | 753213 | # -*- coding: utf-8 -*-
"""
pybitcoin
~~~~~
:copyright: (c) 2014 by Halfmoon Labs
:license: MIT, see LICENSE for more details.
"""
# 2048 words
english_words_bip39 = 'abandon,ability,able,about,above,absent,absorb,abstract,absurd,abuse,access,accident,account,accuse,achieve,acid,acoustic,acquire,acros... | mit |
nmayorov/scikit-learn | sklearn/gaussian_process/kernels.py | 18 | 66251 | """Kernels for Gaussian process regression and classification.
The kernels in this module allow kernel-engineering, i.e., they can be
combined via the "+" and "*" operators or be exponentiated with a scalar
via "**". These sum and product expressions can also contain scalar values,
which are automatically converted to... | bsd-3-clause |
chenhh/PySPPortfolio | PySPPortfolio/pysp_portfolio/exp_cvar.py | 1 | 38832 | # -*- coding: utf-8 -*-
"""
Authors: Hung-Hsin Chen <chenhh@par.cse.nsysu.edu.tw>
License: GPL v2
"""
import os
from time import time
import numpy as np
import pandas as pd
from PySPPortfolio.pysp_portfolio import *
from min_cvar_sp import (MinCVaRSPPortfolio, MinCVaRSPPortfolio2 )
from min_cvar_sip import (MinCVaRSIP... | gpl-3.0 |
robk5uj/invenio | modules/webstat/lib/webstat_engine.py | 3 | 92963 | ## This file is part of Invenio.
## Copyright (C) 2007, 2008, 2010, 2011 CERN.
##
## Invenio is free software; you can redistribute it and/or
## modify it under the terms of the GNU General Public License as
## published by the Free Software Foundation; either version 2 of the
## License, or (at your option) any later ... | gpl-2.0 |
mavenlin/tensorflow | tensorflow/contrib/learn/python/learn/learn_io/data_feeder.py | 88 | 31139 | # Copyright 2016 The TensorFlow Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applica... | apache-2.0 |
astocko/statsmodels | statsmodels/genmod/tests/test_glm.py | 6 | 37718 | """
Test functions for models.GLM
"""
from statsmodels.compat import range
import os
import numpy as np
from numpy.testing import (assert_almost_equal, assert_equal, assert_raises,
assert_allclose, assert_, assert_array_less, dec)
from scipy import stats
import statsmodels.api as sm
from st... | bsd-3-clause |
dato-code/SFrame | oss_src/unity/python/sframe/test/test_sframe.py | 5 | 134915 | '''
Copyright (C) 2016 Turi
All rights reserved.
This software may be modified and distributed under the terms
of the BSD license. See the LICENSE file for details.
'''
# from nose import with_setup
from ..data_structures.sframe import SFrame
from ..data_structures.sarray import SArray
from ..data_structures.image imp... | bsd-3-clause |
sunshinelover/chanlun | vn.trader/ctaAlgo/ctaBacktesting.py | 1 | 34592 | # encoding: UTF-8
'''
本文件中包含的是CTA模块的回测引擎，回测引擎的API和CTA引擎一致，
可以使用和实盘相同的代码进行回测。
'''
from __future__ import division
from datetime import datetime, timedelta
from collections import OrderedDict
from itertools import product
import pymongo
from ctaBase import *
from ctaSetting import *
from vtConstant import *
from vtGa... | mit |
bchareyre/trial | py/plot.py | 5 | 34986 | # encoding: utf-8
# 2008 © Václav Šmilauer <eudoxos@arcig.cz>
"""
Module containing utility functions for plotting inside yade. See :ysrc:`examples/simple-scene/simple-scene-plot.py` or :ysrc:`examples/concrete/uniax.py` for example of usage.
"""
## all exported names
__all__=['data','plots','labels','live','liveInt... | gpl-2.0 |
Djabbz/scikit-learn | sklearn/datasets/samples_generator.py | 103 | 56423 | """
Generate samples of synthetic data sets.
"""
# Authors: B. Thirion, G. Varoquaux, A. Gramfort, V. Michel, O. Grisel,
# G. Louppe, J. Nothman
# License: BSD 3 clause
import numbers
import array
import numpy as np
from scipy import linalg
import scipy.sparse as sp
from ..preprocessing import MultiLabelBin... | bsd-3-clause |
mbayon/TFG-MachineLearning | vbig/lib/python2.7/site-packages/scipy/interpolate/_fitpack_impl.py | 10 | 46541 | """
fitpack (dierckx in netlib) --- A Python-C wrapper to FITPACK (by P. Dierckx).
FITPACK is a collection of FORTRAN programs for curve and surface
fitting with splines and tensor product splines.
See
http://www.cs.kuleuven.ac.be/cwis/research/nalag/research/topics/fitpack.html
or
http://www.netlib.... | mit |
dice-project/DICE-Monitoring | src/pyUtil.py | 4 | 32334 | '''
Copyright 2015, Institute e-Austria, Timisoara, Romania
http://www.ieat.ro/
Developers:
* Gabriel Iuhasz, iuhasz.gabriel@info.uvt.ro
Licensed under the Apache License, Version 2.0 (the "License");
you may not use this file except in compliance with the License.
You may obtain a copy of the License at:
ht... | apache-2.0 |
mdeff/ntds_2016 | project/reports/compressed_sensing/utils.py | 1 | 44865 | import scipy.misc
import os
import shutil
import zipfile
import numpy as np
from itertools import product
import pywt
import matplotlib.pyplot as plt
import mpl_toolkits.axes_grid1
import warnings
import tensorflow as tf
def is_array_str(obj):
"""
Check if obj is a list of strings or a tuple of strings or a se... | mit |
dshean/pygeotools | pygeotools/lib/geolib.py | 1 | 85261 | #! /usr/bin/env python
"""
Geospatial functions for rasters, vectors.
"""
#Need to make sure all geom have spatial reference included
import sys
import os
import requests
import numpy as np
from osgeo import gdal, ogr, osr
#Enable GDAL exceptions
gdal.UseExceptions()
#Below are many spatial reference system defin... | mit |
rs2/pandas | pandas/plotting/_matplotlib/core.py | 1 | 52089 | from typing import TYPE_CHECKING, List, Optional, Tuple
import warnings
from matplotlib.artist import Artist
import numpy as np
from pandas._typing import Label
from pandas.errors import AbstractMethodError
from pandas.util._decorators import cache_readonly
from pandas.core.dtypes.common import (
is_float,
i... | bsd-3-clause |
nan86150/ImageFusion | lib/python2.7/site-packages/numpy/core/tests/test_multiarray.py | 23 | 175667 | from __future__ import division, absolute_import, print_function
import tempfile
import sys
import os
import shutil
import warnings
import operator
import io
if sys.version_info[0] >= 3:
import builtins
else:
import __builtin__ as builtins
from decimal import Decimal
import numpy as np
from nose import SkipT... | mit |
chinageology/GeoPython | geopytool/__init__.py | 1 | 71038 | #!/usr/bin/python3
# coding:utf-8
from geopytool.ImportDependence import *
from geopytool.CustomClass import *
LocationOfMySelf=os.path.dirname(__file__)
#print(LocationOfMySelf,' init')
sign = '''
created on Sat Dec 17 22:28:24 2016
@author: cycleuser
# Create Date: 2015-07-13
# Modify Date: 2018-02-09
a tool se... | gpl-3.0 |
sstoma/CellProfiler | cellprofiler/modules/trackobjects.py | 1 | 137657 | from cellprofiler.gui.help import USING_METADATA_HELP_REF, USING_METADATA_GROUPING_HELP_REF, LOADING_IMAGE_SEQ_HELP_REF
TM_OVERLAP = 'Overlap'
TM_DISTANCE = 'Distance'
TM_MEASUREMENTS = 'Measurements'
TM_LAP = "LAP"
TM_ALL = [TM_OVERLAP, TM_DISTANCE, TM_MEASUREMENTS,TM_LAP]
LT_NONE = 0
LT_PHASE_1 = 1
LT_SPLIT = 2
LT_... | gpl-2.0 |
letsgoexploring/linearsolve-package | linearsolve/__init__.py | 1 | 32412 | from __future__ import division,print_function
import numpy as np
import scipy.linalg as la
from statsmodels.tools.numdiff import approx_fprime_cs
from scipy.optimize import root,fsolve,broyden1,broyden2
import pandas as pd
import sys
class model:
'''Defines a class -- linearsolve.model -- with associated methods... | mit |
procoder317/scikit-learn | sklearn/linear_model/logistic.py | 57 | 65098 | """
Logistic Regression
"""
# Author: Gael Varoquaux <gael.varoquaux@normalesup.org>
# Fabian Pedregosa <f@bianp.net>
# Alexandre Gramfort <alexandre.gramfort@telecom-paristech.fr>
# Manoj Kumar <manojkumarsivaraj334@gmail.com>
# Lars Buitinck
# Simon Wu <s8wu@uwaterloo.ca>
imp... | bsd-3-clause |
plotly/plotly.py | packages/python/plotly/plotly/graph_objs/choroplethmapbox/_colorbar.py | 1 | 73541 | from plotly.basedatatypes import BaseTraceHierarchyType as _BaseTraceHierarchyType
import copy as _copy
class ColorBar(_BaseTraceHierarchyType):
# class properties
# --------------------
_parent_path_str = "choroplethmapbox"
_path_str = "choroplethmapbox.colorbar"
_valid_props = {
"bgcolo... | mit |
openfisca/openfisca-qt | openfisca_qt/openFisca.py | 1 | 63097 | # -*- coding:utf-8 -*-
#
# This file is part of OpenFisca.
# OpenFisca is a socio-fiscal microsimulation software
# Copyright © 2011 Clément Schaff, Mahdi Ben Jelloul
# Licensed under the terms of the GVPLv3 or later license
# (see openfisca/__init__.py for details)
# This file is inspired by Spyder, see openfisca/spy... | agpl-3.0 |
briandrawert/GillesPy | gillespy/gillespy.py | 2 | 52338 | """
A simple toolkit for creating and simulating discrete stochastic models in
python.
This serves primarily as a python wrapper for the C-based solvers within
StochKit2. The gillespy.Model class provides nearly all of the functionality
present in this project.
This version is updated (4/2017) to contain documentat... | gpl-3.0 |
jswanljung/iris | lib/iris/tests/__init__.py | 1 | 39426 | # (C) British Crown Copyright 2010 - 2016, Met Office
#
# This file is part of Iris.
#
# Iris is free software: you can redistribute it and/or modify it under
# the terms of the GNU Lesser General Public License as published by the
# Free Software Foundation, either version 3 of the License, or
# (at your option) any l... | lgpl-3.0 |
msotov/SPECIES | Atmos.py | 1 | 54873 | from __future__ import division
from builtins import range
import os
import math
import re
from dataclasses import dataclass
from past.utils import old_div
import numpy as np
from astropy.stats import sigma_clip
from astropy.io import ascii
from scipy.stats import sigmaclip, linregress
import scipy.odr as ODR
#from int... | mit |
jpautom/scikit-learn | sklearn/tests/test_cross_validation.py | 20 | 46586 | """Test the cross_validation module"""
from __future__ import division
import warnings
import numpy as np
from scipy.sparse import coo_matrix
from scipy.sparse import csr_matrix
from scipy import stats
from sklearn.utils.testing import assert_true
from sklearn.utils.testing import assert_false
from sklearn.utils.test... | bsd-3-clause |
arhik/nupic | external/linux32/lib/python2.6/site-packages/matplotlib/dates.py | 15 | 33969 | """
Matplotlib provides sophisticated date plotting capabilities, standing
on the shoulders of python :mod:`datetime`, the add-on modules
:mod:`pytz` and :mod:`dateutils`. :class:`datetime` objects are
converted to floating point numbers which represent the number of days
since 0001-01-01 UTC. The helper functions :f... | agpl-3.0 |
lesserwhirls/scipy-cwt | scipy/optimize/nonlin.py | 2 | 45860 | r"""
Nonlinear solvers
=================
.. currentmodule:: scipy.optimize
This is a collection of general-purpose nonlinear multidimensional
solvers. These solvers find *x* for which *F(x) = 0*. Both *x*
and *F* can be multidimensional.
Routines
--------
Large-scale nonlinear solvers:
.. autosummary::
newton... | bsd-3-clause |
bigdataelephants/scikit-learn | sklearn/linear_model/least_angle.py | 6 | 48722 | """
Least Angle Regression algorithm. See the documentation on the
Generalized Linear Model for a complete discussion.
"""
from __future__ import print_function
# Author: Fabian Pedregosa <fabian.pedregosa@inria.fr>
# Alexandre Gramfort <alexandre.gramfort@inria.fr>
# Gael Varoquaux
#
# License: BSD 3 ... | bsd-3-clause |
simongibbons/numpy | numpy/lib/npyio.py | 3 | 87121 | import sys
import os
import re
import functools
import itertools
import warnings
import weakref
import contextlib
from operator import itemgetter, index as opindex
from collections.abc import Mapping
import numpy as np
from . import format
from ._datasource import DataSource
from numpy.core import overrides
from numpy... | bsd-3-clause |
loli/sklearn-ensembletrees | sklearn/linear_model/stochastic_gradient.py | 2 | 42996 | # Authors: Peter Prettenhofer <peter.prettenhofer@gmail.com> (main author)
# Mathieu Blondel (partial_fit support)
#
# License: BSD 3 clause
"""Classification and regression using Stochastic Gradient Descent (SGD)."""
import numpy as np
import scipy.sparse as sp
from abc import ABCMeta, abstractmethod
import... | bsd-3-clause |
yufengg/tensorflow | tensorflow/contrib/learn/python/learn/estimators/estimator.py | 9 | 55718 | # Copyright 2016 The TensorFlow Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applica... | apache-2.0 |
tetherless-world/satoru | whyis/interpreter.py | 2 | 57286 | import rdflib
from datetime import datetime
from nanopub import Nanopublication
import logging
import sys
import pandas as pd
import configparser
import hashlib
from .autonomic.update_change_service import UpdateChangeService
from whyis.namespace import whyis, prov, sio
class Interpreter(UpdateChangeService):
k... | apache-2.0 |
apbard/scipy | scipy/stats/_distn_infrastructure.py | 6 | 119658 | #
# Author: Travis Oliphant 2002-2011 with contributions from
# SciPy Developers 2004-2011
#
from __future__ import division, print_function, absolute_import
from scipy._lib.six import string_types, exec_, PY3
from scipy._lib._util import getargspec_no_self as _getargspec
import sys
import keyword
import r... | bsd-3-clause |
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