repo_name string | path string | copies string | size string | content string | license string |
|---|---|---|---|---|---|
jakobworldpeace/scikit-learn | sklearn/metrics/classification.py | 2 | 72558 | """Metrics to assess performance on classification task given class prediction
Functions named as ``*_score`` return a scalar value to maximize: the higher
the better
Function named as ``*_error`` or ``*_loss`` return a scalar value to minimize:
the lower the better
"""
# Authors: Alexandre Gramfort <alexandre.gramf... | bsd-3-clause |
k1643/StratagusAI | projects/player-1/gamelogs.py | 1 | 87828 | import os.path
import csv
import datetime
import glob
import math
import matplotlib.pyplot as plt
import numpy as np
import os
import pickle
import random
import scipy
import scipy.stats # confidence intervals
import sqlite3
import sys
import yaml
# statistics CSV column names and indexes.
cols = {
... | apache-2.0 |
xuewei4d/scikit-learn | sklearn/utils/tests/test_sparsefuncs.py | 8 | 31943 | import pytest
import numpy as np
import scipy.sparse as sp
from scipy import linalg
from numpy.testing import assert_array_almost_equal, assert_array_equal
from numpy.random import RandomState
from sklearn.datasets import make_classification
from sklearn.utils.sparsefuncs import (mean_variance_axis,
... | bsd-3-clause |
tmthydvnprt/compfipy | compfipy/asset.py | 1 | 74951 | # pylint: disable=too-many-public-methods
"""
asset.py
Define the an asset class to contain price data and various calculations, measures, and processed versions of data.
"""
import datetime
import collections
import tabulate
import scipy.stats
import pandas as pd
import numpy as np
import matplotlib.pyplot as plt
... | mit |
cbertinato/pandas | pandas/tests/io/formats/test_style.py | 1 | 54948 | import copy
import re
import textwrap
import numpy as np
import pytest
import pandas.util._test_decorators as td
import pandas as pd
from pandas import DataFrame
import pandas.util.testing as tm
jinja2 = pytest.importorskip('jinja2')
from pandas.io.formats.style import Styler, _get_level_lengths # noqa # isort:sk... | bsd-3-clause |
fujicoin/electrum-fjc | electrum/gui/qt/history_list.py | 2 | 31462 | #!/usr/bin/env python
#
# Electrum - lightweight Bitcoin client
# Copyright (C) 2015 Thomas Voegtlin
#
# Permission is hereby granted, free of charge, to any person
# obtaining a copy of this software and associated documentation files
# (the "Software"), to deal in the Software without restriction,
# including without... | mit |
mugizico/scikit-learn | sklearn/linear_model/stochastic_gradient.py | 130 | 50966 | # Authors: Peter Prettenhofer <peter.prettenhofer@gmail.com> (main author)
# Mathieu Blondel (partial_fit support)
#
# License: BSD 3 clause
"""Classification and regression using Stochastic Gradient Descent (SGD)."""
import numpy as np
import scipy.sparse as sp
from abc import ABCMeta, abstractmethod
from ... | bsd-3-clause |
pjryan126/solid-start-careers | store/api/zillow/venv/lib/python2.7/site-packages/pandas/computation/tests/test_eval.py | 1 | 70497 | #!/usr/bin/env python
# flake8: noqa
import warnings
import operator
from itertools import product
from distutils.version import LooseVersion
import nose
from nose.tools import assert_raises
from numpy.random import randn, rand, randint
import numpy as np
from numpy.testing import assert_allclose
from numpy.testing... | gpl-2.0 |
ioam/lancet | lancet/core.py | 1 | 39453 | #
# Lancet core
#
import os, itertools, copy
import re, glob, string
import json
import param
try:
import numpy as np
np_ftypes = np.sctypes['float']
except:
np, np_ftypes = None, []
try: from pandas import DataFrame
except: DataFrame = None # pyflakes:ignore (try/except import)
try: from holoviews ... | bsd-3-clause |
kashif/scikit-learn | sklearn/feature_extraction/tests/test_text.py | 59 | 35604 | from __future__ import unicode_literals
import warnings
from sklearn.feature_extraction.text import strip_tags
from sklearn.feature_extraction.text import strip_accents_unicode
from sklearn.feature_extraction.text import strip_accents_ascii
from sklearn.feature_extraction.text import HashingVectorizer
from sklearn.fe... | bsd-3-clause |
dominicelse/scipy | scipy/stats/_continuous_distns.py | 6 | 146462 | #
# Author: Travis Oliphant 2002-2011 with contributions from
# SciPy Developers 2004-2011
#
from __future__ import division, print_function, absolute_import
import warnings
import numpy as np
from scipy.misc.doccer import inherit_docstring_from
from scipy import optimize
from scipy import integrate
impor... | bsd-3-clause |
ndingwall/scikit-learn | sklearn/cluster/_optics.py | 6 | 37726 | # -*- coding: utf-8 -*-
"""Ordering Points To Identify the Clustering Structure (OPTICS)
These routines execute the OPTICS algorithm, and implement various
cluster extraction methods of the ordered list.
Authors: Shane Grigsby <refuge@rocktalus.com>
Adrin Jalali <adrinjalali@gmail.com>
Erich Schuber... | bsd-3-clause |
kalvdans/scipy | scipy/stats/_distn_infrastructure.py | 3 | 119483 | #
# Author: Travis Oliphant 2002-2011 with contributions from
# SciPy Developers 2004-2011
#
from __future__ import division, print_function, absolute_import
from scipy._lib.six import string_types, exec_, PY3
from scipy._lib._util import getargspec_no_self as _getargspec
import sys
import keyword
import r... | bsd-3-clause |
Ziqi-Li/bknqgis | pandas/pandas/tests/test_nanops.py | 2 | 42408 | # -*- coding: utf-8 -*-
from __future__ import division, print_function
from functools import partial
import pytest
import warnings
import numpy as np
import pandas as pd
from pandas import Series, isna, _np_version_under1p9
from pandas.core.dtypes.common import is_integer_dtype
import pandas.core.nanops as nanops
i... | gpl-2.0 |
MattDerry/pendulum_3d | src/pendulum_3d_simulator_corr_inv.py | 1 | 30386 | #!/usr/bin/env python
"""
Matt Derry
Summer 2014
Simulate spherical inverted pendulum and publish results so that
ROS can be visualization.
"""
## define all imports:
import roslib
roslib.load_manifest('pendulum_3d')
import rospy
import tf
from sensor_msgs.msg import JointState as JS
from pendulum_3d.msg import *
im... | gpl-2.0 |
dimroc/tensorflow-mnist-tutorial | lib/python3.6/site-packages/matplotlib/text.py | 10 | 82852 | """
Classes for including text in a figure.
"""
from __future__ import (absolute_import, division, print_function,
unicode_literals)
import six
from six.moves import zip
import math
import warnings
import contextlib
import numpy as np
from matplotlib import cbook
from matplotlib import rcPa... | apache-2.0 |
ZwickyTransientFacility/ztf_sim | ztf_sim/QueueManager.py | 1 | 55792 | """Queue classes."""
import os
from collections import defaultdict
from datetime import datetime
import logging
import numpy as np
import pandas as pd
import astropy.coordinates as coord
import astropy.units as u
from astropy.time import Time, TimeDelta
import astroplan
from .Fields import Fields
from .optimize import... | bsd-3-clause |
ubenu/Blits | src/blitspak/blits.py | 1 | 50733 | """
Blits:
Created on 23 May 2017
Original Blivion:
Created on Tue Oct 25 13:11:32 2016
@author: Maria Schilstra
"""
#from PyQt5.uic import loadUiType
from PyQt5 import QtCore as qt
from PyQt5 import QtWidgets as widgets
from PyQt5 import QtGui as gui
import pandas as pd, numpy as np, copy as cp
from blitspak.bli... | gpl-3.0 |
Spinmob/spinmob | _plotting_mess.py | 1 | 40481 | import os as _os
import pylab as _pylab
import numpy as _n
import itertools as _itertools
import time as _time
import spinmob as _s
try: from . import _functions as _fun
except: import _functions as _fun
try: from . import _pylab_tweaks as _pt
except: impor... | gpl-3.0 |
pap/nupic | external/linux32/lib/python2.6/site-packages/matplotlib/backends/backend_gtk.py | 69 | 43991 | from __future__ import division
import os, sys
def fn_name(): return sys._getframe(1).f_code.co_name
try:
import gobject
import gtk; gdk = gtk.gdk
import pango
except ImportError:
raise ImportError("Gtk* backend requires pygtk to be installed.")
pygtk_version_required = (2,2,0)
if gtk.pygtk_version <... | agpl-3.0 |
simsynser/SimSyn | SimSyn.py | 1 | 38537 | # -*- coding: utf-8 -*-
# Form implementation generated from reading ui file 'SimSyn_v02.ui'
#
# Created by: PyQt4 UI code generator 4.11.4
#
# WARNING! All changes made in this file will be lost!
from PyQt4 import QtCore, QtGui
import psycopg2
from psycopg2.extensions import AsIs
import time
import pysd
... | agpl-3.0 |
NixaSoftware/CVis | venv/lib/python2.7/site-packages/pandas/tests/indexes/test_category.py | 3 | 41440 | # -*- coding: utf-8 -*-
import pytest
import pandas.util.testing as tm
from pandas.core.indexes.api import Index, CategoricalIndex
from .common import Base
from pandas.compat import range, PY3
import numpy as np
from pandas import Categorical, IntervalIndex, compat, notna
from pandas.util.testing import assert_alm... | apache-2.0 |
victor-prado/broker-manager | environment/lib/python3.5/site-packages/pandas/tools/tests/test_merge.py | 7 | 56114 | # pylint: disable=E1103
import nose
from datetime import datetime
from numpy.random import randn
from numpy import nan
import numpy as np
import random
import pandas as pd
from pandas.compat import lrange, lzip
from pandas.tools.merge import merge, concat, MergeError
from pandas.util.testing import (assert_frame_equ... | mit |
great-expectations/great_expectations | great_expectations/dataset/dataset.py | 1 | 198226 | import inspect
import logging
from datetime import datetime
from functools import lru_cache, wraps
from itertools import zip_longest
from numbers import Number
from typing import Any, List, Optional, Set, Union
import numpy as np
import pandas as pd
from dateutil.parser import parse
from scipy import stats
from great... | apache-2.0 |
zzcclp/spark | python/pyspark/sql/tests/test_dataframe.py | 9 | 42005 | #
# Licensed to the Apache Software Foundation (ASF) under one or more
# contributor license agreements. See the NOTICE file distributed with
# this work for additional information regarding copyright ownership.
# The ASF licenses this file to You under the Apache License, Version 2.0
# (the "License"); you may not us... | apache-2.0 |
leriomaggio/code-coherence-evaluation-tool | code_comments_coherence/source_code_analysis/admin.py | 1 | 40106 |
from __future__ import division, absolute_import
#-------------------------
# Django framework imports
#-------------------------
from django.contrib import admin
from django.core import urlresolvers
from django.conf import settings
from django.contrib.messages import ERROR
from django.utils.translation import gettex... | bsd-3-clause |
kenshay/ImageScripter | ProgramData/SystemFiles/Python/Lib/site-packages/dask/dataframe/io/tests/test_csv.py | 2 | 39060 | from __future__ import print_function, division, absolute_import
from io import BytesIO
import os
import gzip
from time import sleep
import pytest
pd = pytest.importorskip('pandas')
dd = pytest.importorskip('dask.dataframe')
from toolz import partition_all, valmap
import pandas.util.testing as tm
import dask
impor... | gpl-3.0 |
lvwang2002/python-data-mining-platform | pymining/classifier/smo_csvc.py | 8 | 33742 | import math
import matplotlib
import matplotlib.pyplot as plt
import numpy
import os
import pickle
import psyco
psyco.full()
import sys
import time
from ..common.global_info import GlobalInfo
from ..common.configuration import Configuration
from ..math.matrix import Matrix
from ..math.text2matrix import Text2Matrix
fr... | bsd-3-clause |
makinacorpus/formhub | odk_viewer/tests/test_exports.py | 1 | 87463 | from sys import stdout
import os
import datetime
import json
import StringIO
import csv
import tempfile
import zipfile
import shutil
from openpyxl import load_workbook
from time import sleep
from pyxform.builder import create_survey_from_xls
from django.conf import settings
from main.tests.test_base import MainTestCase... | bsd-2-clause |
IndraVikas/scikit-learn | sklearn/linear_model/least_angle.py | 57 | 49338 | """
Least Angle Regression algorithm. See the documentation on the
Generalized Linear Model for a complete discussion.
"""
from __future__ import print_function
# Author: Fabian Pedregosa <fabian.pedregosa@inria.fr>
# Alexandre Gramfort <alexandre.gramfort@inria.fr>
# Gael Varoquaux
#
# License: BSD 3 ... | bsd-3-clause |
arhik/nupic | external/linux32/lib/python2.6/site-packages/matplotlib/contour.py | 69 | 42063 | """
These are classes to support contour plotting and
labelling for the axes class
"""
from __future__ import division
import warnings
import matplotlib as mpl
import numpy as np
from numpy import ma
import matplotlib._cntr as _cntr
import matplotlib.path as path
import matplotlib.ticker as ticker
import matplotlib.cm... | agpl-3.0 |
Aegeaner/spark | python/pyspark/sql/functions.py | 1 | 134163 | #
# Licensed to the Apache Software Foundation (ASF) under one or more
# contributor license agreements. See the NOTICE file distributed with
# this work for additional information regarding copyright ownership.
# The ASF licenses this file to You under the Apache License, Version 2.0
# (the "License"); you may not us... | apache-2.0 |
pbrod/numpy | numpy/core/fromnumeric.py | 2 | 122368 | """Module containing non-deprecated functions borrowed from Numeric.
"""
import functools
import types
import warnings
import numpy as np
from . import multiarray as mu
from . import overrides
from . import umath as um
from . import numerictypes as nt
from .multiarray import asarray, array, asanyarray, concatenate
fr... | bsd-3-clause |
apbard/scipy | scipy/signal/spectral.py | 1 | 66503 | """Tools for spectral analysis.
"""
from __future__ import division, print_function, absolute_import
import numpy as np
from scipy import fftpack
from . import signaltools
from .windows import get_window
from ._spectral import _lombscargle
from ._arraytools import const_ext, even_ext, odd_ext, zero_ext
import warning... | bsd-3-clause |
TNT-Samuel/Coding-Projects | DNS Server/Source - Copy/Lib/site-packages/dask/bag/tests/test_bag.py | 2 | 40727 | # coding=utf-8
from __future__ import absolute_import, division, print_function
import pytest
import math
import os
import random
import sys
from collections import Iterator
from itertools import repeat
import partd
from toolz import merge, join, filter, identity, valmap, groupby, pluck
import dask
import dask.bag a... | gpl-3.0 |
chugunovyar/factoryForBuild | env/lib/python2.7/site-packages/numpy/lib/npyio.py | 23 | 73862 | from __future__ import division, absolute_import, print_function
import sys
import os
import re
import itertools
import warnings
import weakref
from operator import itemgetter, index as opindex
import numpy as np
from . import format
from ._datasource import DataSource
from numpy.core.multiarray import packbits, unpa... | gpl-3.0 |
dnjohnstone/hyperspy | hyperspy/_signals/signal2d.py | 1 | 35008 | # -*- coding: utf-8 -*-
# Copyright 2007-2020 The HyperSpy developers
#
# This file is part of HyperSpy.
#
# HyperSpy is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at... | gpl-3.0 |
CallaJun/hackprince | indico/matplotlib/axes/_axes.py | 10 | 260820 | from __future__ import (absolute_import, division, print_function,
unicode_literals)
import six
from six.moves import reduce, xrange, zip, zip_longest
import math
import warnings
import numpy as np
from numpy import ma
import matplotlib
rcParams = matplotlib.rcParams
import matplotlib.cbook... | lgpl-3.0 |
bzero/statsmodels | statsmodels/regression/tests/test_regression.py | 18 | 38246 | """
Test functions for models.regression
"""
# TODO: Test for LM
from statsmodels.compat.python import long, lrange
import warnings
import pandas
import numpy as np
from numpy.testing import (assert_almost_equal, assert_approx_equal, assert_,
assert_raises, assert_equal, assert_allclose)
fro... | bsd-3-clause |
jforbess/pvlib-python | pvlib/pvsystem.py | 1 | 42489 | """
The ``pvsystem`` module contains functions for modeling the output and
performance of PV modules and inverters.
"""
from __future__ import division
import logging
pvl_logger = logging.getLogger('pvlib')
import io
try:
from urllib2 import urlopen
except ImportError:
from urllib.request import urlopen
imp... | bsd-3-clause |
Winand/pandas | pandas/tests/indexes/timedeltas/test_ops.py | 6 | 48590 | import pytest
import numpy as np
from datetime import timedelta
from distutils.version import LooseVersion
import pandas as pd
import pandas.util.testing as tm
from pandas import to_timedelta
from pandas.util.testing import assert_series_equal, assert_frame_equal
from pandas import (Series, Timedelta, DataFrame, Time... | bsd-3-clause |
GuessWhoSamFoo/pandas | pandas/tests/frame/test_axis_select_reindex.py | 1 | 44950 | # -*- coding: utf-8 -*-
from __future__ import print_function
from datetime import datetime
import numpy as np
import pytest
from pandas.compat import lrange, lzip, u
from pandas.errors import PerformanceWarning
import pandas as pd
from pandas import (
Categorical, DataFrame, Index, MultiIndex, Series, compat,... | bsd-3-clause |
HaebinShin/tensorflow | tensorflow/contrib/learn/python/learn/estimators/estimator.py | 1 | 33804 | # Copyright 2016 The TensorFlow Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applica... | apache-2.0 |
abhisg/scikit-learn | sklearn/tree/tree.py | 2 | 37683 | """
This module gathers tree-based methods, including decision, regression and
randomized trees. Single and multi-output problems are both handled.
"""
# Authors: Gilles Louppe <g.louppe@gmail.com>
# Peter Prettenhofer <peter.prettenhofer@gmail.com>
# Brian Holt <bdholt1@gmail.com>
# Noel Da... | bsd-3-clause |
jbloom/mutpath | src/trajectory.py | 1 | 39654 | """Module for representing mutational trajectories as directed graphs.
Represents mutational trajectories through sequence space, which is the space in
which each node is a unique sequence and edges are directional connections
between nodes corresponding to mutations.
These digraphs can be used to visualize mutationa... | gpl-3.0 |
HarllanAndrye/nilmtk | nilmtk/elecmeter.py | 5 | 30305 | from __future__ import print_function, division
from warnings import warn
from collections import namedtuple
from copy import deepcopy
from itertools import izip
import numpy as np
import pandas as pd
import matplotlib.pyplot as plt
import random
from .preprocessing import Clip
from .stats import TotalEnergy, GoodSecti... | apache-2.0 |
allisony/pyspeckit | ah_bootstrap.py | 16 | 35044 | """
This bootstrap module contains code for ensuring that the astropy_helpers
package will be importable by the time the setup.py script runs. It also
includes some workarounds to ensure that a recent-enough version of setuptools
is being used for the installation.
This module should be the first thing imported in th... | mit |
Transkribus/TranskribusDU | TranskribusDU/tasks/DU_Table/rowDetection.py | 1 | 90019 | # -*- coding: utf-8 -*-
"""
Build Rows for a BIESO model
H. Déjean
copyright Xerox 2017, Naver 2017, 2018
READ project
Developed for the EU project READ. The READ project has received funding
from the European Union's Horizon 2020 research and innovation programme
u... | bsd-3-clause |
fabiopetroni/Dato-Core | src/unity/python/graphlab/data_structures/sarray.py | 13 | 91593 | """
This module defines the SArray class which provides the
ability to create, access and manipulate a remote scalable array object.
SArray acts similarly to pandas.Series but without indexing.
The data is immutable, homogeneous, and is stored on the GraphLab Server side.
"""
'''
Copyright (C) 2015 Dato, Inc.
All rig... | agpl-3.0 |
raghavrv/scikit-learn | sklearn/ensemble/tests/test_forest.py | 6 | 42990 | """
Testing for the forest module (sklearn.ensemble.forest).
"""
# Authors: Gilles Louppe,
# Brian Holt,
# Andreas Mueller,
# Arnaud Joly
# License: BSD 3 clause
import pickle
from collections import defaultdict
from itertools import combinations
from itertools import product
import numpy ... | bsd-3-clause |
fzalkow/scikit-learn | sklearn/metrics/pairwise.py | 104 | 42995 | # -*- coding: utf-8 -*-
# Authors: Alexandre Gramfort <alexandre.gramfort@inria.fr>
# Mathieu Blondel <mathieu@mblondel.org>
# Robert Layton <robertlayton@gmail.com>
# Andreas Mueller <amueller@ais.uni-bonn.de>
# Philippe Gervais <philippe.gervais@inria.fr>
# Lars Buitinck ... | bsd-3-clause |
mikegraham/dask | dask/dataframe/tests/test_io.py | 1 | 34901 | import gzip
import pandas as pd
import numpy as np
import pandas.util.testing as tm
import os
import dask
import pytest
from threading import Lock
import shutil
from time import sleep
import threading
import dask.array as da
import dask.dataframe as dd
from dask.dataframe.io import (from_array, from_bcolz, from_dask_a... | bsd-3-clause |
kenshay/ImageScript | ProgramData/SystemFiles/Python/Lib/site-packages/matplotlib/backends/backend_tkagg.py | 10 | 40267 | # Todd Miller jmiller@stsci.edu
from __future__ import (absolute_import, division, print_function,
unicode_literals)
import six
from six.moves import tkinter as Tk
from six.moves import tkinter_filedialog as FileDialog
import os, sys, math
import os.path
# Paint image to Tk photo blitter ex... | gpl-3.0 |
demiangomez/Parallel.GAMIT | classes/pyETM.py | 1 | 109441 | # -*- coding: utf-8 -*-
"""
Project: Parallel.Archive
Date: 3/3/17 11:27 AM
Author: Demian D. Gomez
"""
import numpy as np
import pyStationInfo
import pyDate
from numpy import sin
from numpy import cos
from numpy import pi
from scipy.stats import chi2
import pyEvents
from zlib import crc32
from Utils import ct2lg
from... | gpl-3.0 |
ryfeus/lambda-packs | Keras_tensorflow_nightly/source2.7/tensorflow/contrib/learn/python/learn/estimators/estimator.py | 14 | 62939 | # Copyright 2016 The TensorFlow Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applica... | mit |
joergdietrich/astropy | astropy/table/table.py | 2 | 101482 | # Licensed under a 3-clause BSD style license - see LICENSE.rst
from __future__ import (absolute_import, division, print_function,
unicode_literals)
from ..extern import six
from ..extern.six.moves import zip, range
from .index import TableIndices, TableLoc, TableILoc
import re
import sys
from ... | bsd-3-clause |
MyRookie/SentimentAnalyse | venv/lib/python2.7/site-packages/numpy/linalg/linalg.py | 11 | 75845 | """Lite version of scipy.linalg.
Notes
-----
This module is a lite version of the linalg.py module in SciPy which
contains high-level Python interface to the LAPACK library. The lite
version only accesses the following LAPACK functions: dgesv, zgesv,
dgeev, zgeev, dgesdd, zgesdd, dgelsd, zgelsd, dsyevd, zheevd, dgetr... | mit |
liam2/larray | larray/tests/test_array.py | 2 | 174871 | # -*- coding: utf8 -*-
from __future__ import absolute_import, division, print_function
import os
import re
import sys
import pytest
import numpy as np
import pandas as pd
from collections import OrderedDict
from larray.tests.common import (inputpath, tmp_path, meta,
assert_array_equ... | gpl-3.0 |
omerwe/PCGCs | deprecated/pcgcs_direct.py | 1 | 39643 | from __future__ import division
import numpy as np
import scipy.stats as stats
import scipy.linalg as la
import sys
import random
import time
import os
import os.path
import pandas as pd
import itertools
np.set_printoptions(precision=4, linewidth=200)
from sklearn.linear_model import LinearRegression, LogisticRegressio... | mit |
Azeret/galIMF | plot_stellar_yield_table.py | 1 | 38495 | import time
import math
import matplotlib.pyplot as plt
import numpy as np
from scipy import interpolate
import element_abundances_solar
reference_name = 'Anders1989'
H_abundances_solar = element_abundances_solar.function_solar_element_abundances(reference_name, 'H')
# He_abundances_solar = element_abundances_solar.fu... | gpl-3.0 |
rohit21122012/DCASE2013 | runs/2016/baseline2016_mfcc_21/src/evaluation.py | 56 | 43426 | #!/usr/bin/env python
# -*- coding: utf-8 -*-
import math
import numpy
import sys
from sklearn import metrics
class DCASE2016_SceneClassification_Metrics():
"""DCASE 2016 scene classification metrics
Examples
--------
>>> dcase2016_scene_metric = DCASE2016_SceneClassification_Metrics(class_lis... | mit |
bhargav/scikit-learn | sklearn/ensemble/tests/test_forest.py | 26 | 41675 | """
Testing for the forest module (sklearn.ensemble.forest).
"""
# Authors: Gilles Louppe,
# Brian Holt,
# Andreas Mueller,
# Arnaud Joly
# License: BSD 3 clause
import pickle
from collections import defaultdict
from itertools import combinations
from itertools import product
import numpy ... | bsd-3-clause |
LFPy/LFPy | LFPy/cell.py | 1 | 106760 | #!/usr/bin/env python
# -*- coding: utf-8 -*-
"""
Copyright (C) 2012 Computational Neuroscience Group, NMBU.
This program is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at you... | gpl-3.0 |
vrtsystems/pyhaystack | pyhaystack/client/ops/his.py | 1 | 31373 | #!/usr/bin/env python
# -*- coding: utf-8 -*-
"""
High-level history functions. These wrap the basic his_read function to allow
some alternate representations of the historical data.
"""
import hszinc
import fysom
import pytz
from copy import deepcopy
from datetime import tzinfo
from six import string_types
from ..... | apache-2.0 |
anielsen001/scipy | scipy/cluster/hierarchy.py | 2 | 96514 | """
========================================================
Hierarchical clustering (:mod:`scipy.cluster.hierarchy`)
========================================================
.. currentmodule:: scipy.cluster.hierarchy
These functions cut hierarchical clusterings into flat clusterings
or find the roots of the forest f... | bsd-3-clause |
bryangraham/ipt | ipt/att.py | 1 | 39159 | # Load library dependencies
import numpy as np
import numpy.linalg
import scipy as sp
import scipy.optimize
import scipy.stats
import pandas as pd
# Import logit() command in ipt module since att() calls it
from .logit import logit
# Define att() function
#-----------------------------------------------------------... | mit |
mbayon/TFG-MachineLearning | venv/lib/python3.6/site-packages/scipy/signal/ltisys.py | 7 | 116413 | """
ltisys -- a collection of classes and functions for modeling linear
time invariant systems.
"""
from __future__ import division, print_function, absolute_import
#
# Author: Travis Oliphant 2001
#
# Feb 2010: Warren Weckesser
# Rewrote lsim2 and added impulse2.
# Apr 2011: Jeffrey Armstrong <jeff@approximatrix.co... | mit |
trachelr/mne-python | mne/decoding/time_gen.py | 2 | 49656 | # Authors: Jean-Remi King <jeanremi.king@gmail.com>
# Alexandre Gramfort <alexandre.gramfort@telecom-paristech.fr>
# Denis Engemann <denis.engemann@gmail.com>
# Clement Moutard <clement.moutard@gmail.com>
#
# License: BSD (3-clause)
import numpy as np
import copy
from ..io.pick import pick_... | bsd-3-clause |
hainm/scipy | scipy/special/basic.py | 26 | 64332 | #
# Author: Travis Oliphant, 2002
#
from __future__ import division, print_function, absolute_import
import warnings
import numpy as np
from scipy._lib.six import xrange
from numpy import (pi, asarray, floor, isscalar, iscomplex, real, imag, sqrt,
where, mgrid, sin, place, issubdtype, extract,
... | bsd-3-clause |
xwolf12/scikit-learn | sklearn/decomposition/dict_learning.py | 104 | 44632 | """ Dictionary learning
"""
from __future__ import print_function
# Author: Vlad Niculae, Gael Varoquaux, Alexandre Gramfort
# License: BSD 3 clause
import time
import sys
import itertools
from math import sqrt, ceil
import numpy as np
from scipy import linalg
from numpy.lib.stride_tricks import as_strided
from ..b... | bsd-3-clause |
blorgon9000/pyopus | pyopus/evaluator/measure.py | 1 | 36720 | # Measurements module
"""
.. inheritance-diagram:: pyopus.evaluator.measure
:parts: 1
**Performance measure extraction module**
All functions in this module do one of the following things:
* return an object of a Python numeric type (int, float, or complex)
* return an n-dimensional array (where n ca... | gpl-3.0 |
Statoil/libecl | python/ecl/grid/ecl_grid.py | 1 | 58619 | # Copyright (C) 2011 Equinor ASA, Norway.
#
# The file 'ecl_grid.py' is part of ERT - Ensemble based Reservoir Tool.
#
# ERT is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the Licens... | gpl-3.0 |
DGrady/pandas | pandas/tests/test_multilevel.py | 2 | 106590 | # -*- coding: utf-8 -*-
# pylint: disable-msg=W0612,E1101,W0141
from warnings import catch_warnings
import datetime
import itertools
import pytest
import pytz
from numpy.random import randn
import numpy as np
from pandas.core.index import Index, MultiIndex
from pandas import Panel, DataFrame, Series, notna, isna, Tim... | bsd-3-clause |
MicrosoftGenomics/FaST-LMM | fastlmm/util/runner/Hadoop.py | 1 | 31716 | '''
Runs a distributable job on an Hadoop cluster. Its run method return 'None'
See SamplePi.py for examples.
'''
import logging
from fastlmm.util.runner import *
import os
import cPickle as pickle
import subprocess, sys, os.path
import multiprocessing
import fastlmm.util.util as util
import pdb
from collections impo... | apache-2.0 |
dneuman/Weather | Weather.py | 1 | 93251 | #!/usr/bin/env python
"""
Weather Module
**************
Routines to deal with bulk weather data from Environment Canada
WxDF Class
----------
* Update - Add years to data
* Save - Save consolidated data
* GetFirstDay - returns index to first day of data
* GetLastDay - Returns index to last day of data
... | bsd-3-clause |
nburn42/tensorflow | tensorflow/contrib/learn/python/learn/estimators/dnn_linear_combined_test.py | 30 | 70017 | # Copyright 2016 The TensorFlow Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applica... | apache-2.0 |
muLAn-project/muLAn | muLAn/models/grid_dmcmc.py | 1 | 59319 | # -*-coding:Utf-8 -*
# ----------------------------------------------------------------------
# ----------------------------------------------------------------------
# External libraries
# ----------------------------------------------------------------------
import sys
import os
# ---------------------------------... | mit |
DucQuang1/py-earth | pyearth/earth.py | 1 | 31698 | from ._forward import ForwardPasser
from ._pruning import PruningPasser
from ._util import ascii_table, apply_weights_2d, apply_weights_1d, gcv
from sklearn.base import RegressorMixin, BaseEstimator, TransformerMixin
from sklearn.utils.validation import (assert_all_finite, check_is_fitted,
... | bsd-3-clause |
BigDataforYou/movie_recommendation_workshop_1 | big_data_4_you_demo_1/venv/lib/python2.7/site-packages/pandas/tests/indexes/test_multi.py | 1 | 88291 | # -*- coding: utf-8 -*-
from datetime import timedelta
from itertools import product
import nose
import re
import warnings
from pandas import (date_range, MultiIndex, Index, CategoricalIndex,
compat)
from pandas.core.common import PerformanceWarning
from pandas.indexes.base import InvalidIndexErro... | mit |
flowmatters/veneer-py | veneer/general.py | 1 | 36068 | try:
from urllib2 import quote
import httplib as hc
except:
from urllib.request import quote
import http.client as hc
import json
import re
from .server_side import VeneerIronPython
from .utils import SearchableList, _stringToList, read_veneer_csv, objdict#, deprecate_async
import pandas as pd
# Source... | isc |
lhilt/scipy | scipy/optimize/zeros.py | 3 | 50128 | from __future__ import division, print_function, absolute_import
import warnings
from collections import namedtuple
from . import _zeros
import numpy as np
_iter = 100
_xtol = 2e-12
_rtol = 4 * np.finfo(float).eps
__all__ = ['newton', 'bisect', 'ridder', 'brentq', 'brenth', 'toms748',
'RootResults']
# M... | bsd-3-clause |
dsm054/pandas | pandas/tests/io/test_excel.py | 1 | 99752 | # pylint: disable=E1101
import os
import warnings
from datetime import datetime, date, time, timedelta
from distutils.version import LooseVersion
from functools import partial
from warnings import catch_warnings
from collections import OrderedDict
import numpy as np
import pytest
from numpy import nan
import pandas a... | bsd-3-clause |
linebp/pandas | pandas/io/pytables.py | 1 | 161539 | """
High level interface to PyTables for reading and writing pandas data structures
to disk
"""
# pylint: disable-msg=E1101,W0613,W0603
from datetime import datetime, date
import time
import re
import copy
import itertools
import warnings
import os
from pandas.core.dtypes.common import (
is_list_like,
is_cate... | bsd-3-clause |
stuartsale/marg_iso | marg_iso/posterior.py | 1 | 36565 | # Import stuff
from __future__ import print_function, division
import emcee
import numpy as np
from scipy import linalg
import sklearn.cluster as sk_c
import sklearn.mixture as sk_m
# Attempt to import matplotlib
try:
import matplotlib as mpl
import matplotlib.pyplot as plt
mpl_present = True
except Impor... | bsd-3-clause |
mtkwock/Genome-Matching | code/thinkbayes2.py | 1 | 67439 | """This file contains code for use with "Think Stats" and
"Think Bayes", both by Allen B. Downey, available from greenteapress.com
Copyright 2014 Allen B. Downey
License: GNU GPLv3 http://www.gnu.org/licenses/gpl.html
"""
from __future__ import print_function, division
"""This file contains class definitions for:
H... | mit |
treycausey/scikit-learn | sklearn/metrics/pairwise.py | 1 | 42965 | # -*- coding: utf-8 -*-
"""
The :mod:`sklearn.metrics.pairwise` submodule implements utilities to evaluate
pairwise distances, paired distances or affinity of sets of samples.
This module contains both distance metrics and kernels. A brief summary is
given on the two here.
Distance metrics are a function d(a, b) such... | bsd-3-clause |
nachandr/cfme_tests | cfme/utils/smem_memory_monitor.py | 2 | 67126 | """Monitor Memory on a CFME/Miq appliance and builds report&graphs displaying usage per process."""
import json
import os
import time
import traceback
from collections import OrderedDict
from datetime import datetime
from threading import Thread
import yaml
from yaycl import AttrDict
from cfme.utils.conf import cfme_... | gpl-2.0 |
huzq/scikit-learn | sklearn/model_selection/_search.py | 1 | 63016 | """
The :mod:`sklearn.model_selection._search` includes utilities to fine-tune the
parameters of an estimator.
"""
# Author: Alexandre Gramfort <alexandre.gramfort@inria.fr>,
# Gael Varoquaux <gael.varoquaux@normalesup.org>
# Andreas Mueller <amueller@ais.uni-bonn.de>
# Olivier Grisel <olivier.... | bsd-3-clause |
geopandas/geopandas | geopandas/base.py | 1 | 112249 | from warnings import warn
import numpy as np
import pandas as pd
from pandas import DataFrame, Series
from shapely.geometry import box
from shapely.geometry.base import BaseGeometry
from shapely.ops import cascaded_union
from .array import GeometryArray, GeometryDtype
def is_geometry_type(data):
"""
Check ... | bsd-3-clause |
jhprinz/openpathsampling | openpathsampling/high_level/move_scheme.py | 1 | 35322 | import openpathsampling as paths
from openpathsampling.tools import refresh_output
from . import move_strategy
from .move_strategy import levels as strategy_levels
from openpathsampling.netcdfplus import StorableNamedObject
try:
import pandas as pd
has_pandas = True
except ImportError:
has_pandas = False
... | lgpl-2.1 |
drammock/mne-python | mne/preprocessing/ica.py | 2 | 118763 | # -*- coding: utf-8 -*-
#
# Authors: Denis A. Engemann <denis.engemann@gmail.com>
# Alexandre Gramfort <alexandre.gramfort@inria.fr>
# Juergen Dammers <j.dammers@fz-juelich.de>
#
# License: BSD (3-clause)
from inspect import isfunction
from collections import namedtuple
from copy import deepcopy
from... | bsd-3-clause |
zfrenchee/pandas | pandas/tests/frame/test_to_csv.py | 1 | 45178 | # -*- coding: utf-8 -*-
from __future__ import print_function
import csv
import pytest
from numpy import nan
import numpy as np
from pandas.compat import (lmap, range, lrange, StringIO, u)
from pandas.core.common import _all_none
from pandas.errors import ParserError
from pandas import (DataFrame, Index, Series, Mu... | bsd-3-clause |
utke1/numpy | numpy/core/tests/test_multiarray.py | 3 | 247597 | from __future__ import division, absolute_import, print_function
import collections
import tempfile
import sys
import shutil
import warnings
import operator
import io
import itertools
import ctypes
import os
import gc
if sys.version_info[0] >= 3:
import builtins
else:
import __builtin__ as builtins
from decima... | bsd-3-clause |
chngchinboon/intercomstats | scripts/LLdataframe.py | 1 | 43472 | # -*- coding: utf-8 -*-
"""
Created on Wed Nov 16 16:19:36 2016
########################################################################################################
#Current bugs
########################################################################################################
#Possible errors in overal... | mit |
MJuddBooth/pandas | pandas/tests/series/test_analytics.py | 1 | 58296 | # coding=utf-8
# pylint: disable-msg=E1101,W0612
from distutils.version import LooseVersion
from itertools import product
import operator
import numpy as np
from numpy import nan
import pytest
from pandas.compat import PY2, PY35, is_platform_windows, lrange, range
import pandas.util._test_decorators as td
import pa... | bsd-3-clause |
adamrp/qiime | qiime/group.py | 15 | 35019 | #!/usr/bin/env python
"""This module contains functions useful for obtaining groupings."""
__author__ = "Jai Ram Rideout"
__copyright__ = "Copyright 2011, The QIIME project"
__credits__ = ["Jai Ram Rideout",
"Greg Caporaso",
"Jeremy Widmann"]
__license__ = "GPL"
__version__ = "1.9.1-dev"... | gpl-2.0 |
krez13/scikit-learn | sklearn/svm/classes.py | 34 | 40599 | import warnings
import numpy as np
from .base import _fit_liblinear, BaseSVC, BaseLibSVM
from ..base import BaseEstimator, RegressorMixin
from ..linear_model.base import LinearClassifierMixin, SparseCoefMixin, \
LinearModel
from ..feature_selection.from_model import _LearntSelectorMixin
from ..utils import check_X... | bsd-3-clause |
waterponey/scikit-learn | sklearn/ensemble/tests/test_gradient_boosting.py | 6 | 40529 | """
Testing for the gradient boosting module (sklearn.ensemble.gradient_boosting).
"""
import warnings
import numpy as np
from itertools import product
from scipy.sparse import csr_matrix
from scipy.sparse import csc_matrix
from scipy.sparse import coo_matrix
from sklearn import datasets
from sklearn.base import clo... | bsd-3-clause |
ishank08/scikit-learn | sklearn/cluster/tests/test_k_means.py | 26 | 32656 | """Testing for K-means"""
import sys
import numpy as np
from scipy import sparse as sp
from sklearn.utils.testing import assert_equal
from sklearn.utils.testing import assert_array_equal
from sklearn.utils.testing import assert_array_almost_equal
from sklearn.utils.testing import SkipTest
from sklearn.utils.testing i... | bsd-3-clause |
tomlof/scikit-learn | sklearn/model_selection/_validation.py | 6 | 38471 | """
The :mod:`sklearn.model_selection._validation` module includes classes and
functions to validate the model.
"""
# Author: Alexandre Gramfort <alexandre.gramfort@inria.fr>,
# Gael Varoquaux <gael.varoquaux@normalesup.org>,
# Olivier Grisel <olivier.grisel@ensta.org>
# License: BSD 3 clause
from __... | bsd-3-clause |
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