repo_name string | path string | copies string | size string | content string | license string |
|---|---|---|---|---|---|
rohit21122012/DCASE2013 | runs/2016/dnn2016med_traps/traps2/src/dataset.py | 55 | 78980 | #!/usr/bin/env python
# -*- coding: utf-8 -*-
import locale
import socket
import tarfile
import urllib2
import zipfile
from sklearn.cross_validation import StratifiedShuffleSplit, KFold
from files import *
from general import *
from ui import *
class Dataset(object):
"""Dataset base class.
The specific da... | mit |
yufengg/tensorflow | tensorflow/contrib/learn/python/learn/estimators/estimator_test.py | 16 | 46691 | # Copyright 2016 The TensorFlow Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applica... | apache-2.0 |
Tong-Chen/scikit-learn | sklearn/cross_validation.py | 2 | 50225 | """
The :mod:`sklearn.cross_validation` module includes utilities for cross-
validation and performance evaluation.
"""
# Author: Alexandre Gramfort <alexandre.gramfort@inria.fr>,
# Gael Varoquaux <gael.varoquaux@normalesup.org>,
# Olivier Grisel <olivier.grisel@ensta.org>
# License: BSD 3 clause
from... | bsd-3-clause |
jereze/scikit-learn | sklearn/utils/estimator_checks.py | 31 | 52862 | from __future__ import print_function
import types
import warnings
import sys
import traceback
import pickle
from copy import deepcopy
import numpy as np
from scipy import sparse
import struct
from sklearn.externals.six.moves import zip
from sklearn.externals.joblib import hash, Memory
from sklearn.utils.testing imp... | bsd-3-clause |
edwardb/sattrackV2 | base.py | 2 | 54414 | #!/usr/bin/python
# -*- coding: utf-8 -*-
"""Basic methods to help plot and interpret experimental data
This module contains the following classes:
- :class:`ArrowLine` - A matplotlib subclass to draw an arrowhead on a line
- :class:`Quantity` - Named tuple class for a constant physical quantity
and the following f... | gpl-3.0 |
rmcgibbo/scipy | scipy/stats/tests/test_morestats.py | 2 | 44608 | # Author: Travis Oliphant, 2002
#
# Further enhancements and tests added by numerous SciPy developers.
#
from __future__ import division, print_function, absolute_import
import warnings
import numpy as np
from numpy.random import RandomState
from numpy.testing import (TestCase, run_module_suite, assert_array_equal,
... | bsd-3-clause |
MartialD/hyperspy | hyperspy/_signals/eds.py | 2 | 44775 | # -*- coding: utf-8 -*-
# Copyright 2007-2016 The HyperSpy developers
#
# This file is part of HyperSpy.
#
# HyperSpy is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at... | gpl-3.0 |
saketkc/statsmodels | statsmodels/discrete/tests/test_discrete.py | 19 | 55886 | """
Tests for discrete models
Notes
-----
DECIMAL_3 is used because it seems that there is a loss of precision
in the Stata *.dta -> *.csv output, NOT the estimator for the Poisson
tests.
"""
# pylint: disable-msg=E1101
from statsmodels.compat.python import range
import os
import numpy as np
from numpy.testing import ... | bsd-3-clause |
hlin117/scikit-learn | sklearn/tree/tests/test_tree.py | 17 | 64758 | """
Testing for the tree module (sklearn.tree).
"""
import copy
import pickle
from functools import partial
from itertools import product
import struct
import numpy as np
from scipy.sparse import csc_matrix
from scipy.sparse import csr_matrix
from scipy.sparse import coo_matrix
from sklearn.random_projection import s... | bsd-3-clause |
mgr0dzicki/python-neo | neo/io/neuralynxio.py | 2 | 106780 | # -*- coding: utf-8 -*-
"""
Class for reading data from Neuralynx files.
This IO supports NCS, NEV and NSE file formats.
Depends on: numpy
Supported: Read
Author: Julia Sprenger, Carlos Canova
Adapted from the exampleIO of python-neo
"""
# needed for python 3 compatibility
from __future__ import absolute_import, di... | bsd-3-clause |
ericmckean/syzygy | third_party/numpy/files/numpy/lib/function_base.py | 16 | 109648 | __docformat__ = "restructuredtext en"
__all__ = ['select', 'piecewise', 'trim_zeros', 'copy', 'iterable',
'percentile', 'diff', 'gradient', 'angle', 'unwrap', 'sort_complex',
'disp', 'extract', 'place', 'nansum', 'nanmax', 'nanargmax',
'nanargmin', 'nanmin', 'vectorize', 'asarray_chkfinite', 'av... | apache-2.0 |
lancezlin/ml_template_py | lib/python2.7/site-packages/matplotlib/backends/backend_pgf.py | 7 | 36822 | from __future__ import (absolute_import, division, print_function,
unicode_literals)
from matplotlib.externals import six
import math
import os
import sys
import errno
import re
import shutil
import tempfile
import codecs
import atexit
import weakref
import warnings
import numpy as np
import... | mit |
Mistobaan/tensorflow | tensorflow/contrib/metrics/python/ops/metric_ops_test.py | 7 | 266607 | # Copyright 2016 The TensorFlow Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applica... | apache-2.0 |
krez13/scikit-learn | sklearn/utils/estimator_checks.py | 17 | 56282 | from __future__ import print_function
import types
import warnings
import sys
import traceback
import pickle
from copy import deepcopy
import numpy as np
from scipy import sparse
import struct
from sklearn.externals.six.moves import zip
from sklearn.externals.joblib import hash, Memory
from sklearn.utils.testing imp... | bsd-3-clause |
RegulatoryGenomicsUPF/pyicoteo | pyicoteolib/parser_old.py | 1 | 45496 | """
Pyicoteo is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY... | gpl-3.0 |
buguen/pylayers | pylayers/antprop/signature.py | 1 | 118968 | #-*- coding:Utf-8 -*-
"""
Class Signatures
================
.. autosummary::
:toctree: generated/
Signatures.__init__
Signatures.__repr__
Signatures.__len__
Signatures.num
Signatures.info
Signatures.saveh5
Signatures.loadh5
Signatures._saveh5
Signatures._loadh5
Signatures.l... | lgpl-3.0 |
ahaberlie/MetPy | src/metpy/xarray.py | 1 | 42403 | # Copyright (c) 2018,2019 MetPy Developers.
# Distributed under the terms of the BSD 3-Clause License.
# SPDX-License-Identifier: BSD-3-Clause
"""Provide accessors to enhance interoperability between xarray and MetPy.
MetPy relies upon the `CF Conventions <http://cfconventions.org/>`_. to provide helpful
attributes an... | bsd-3-clause |
MycChiu/tensorflow | tensorflow/contrib/learn/python/learn/estimators/estimator_test.py | 6 | 36350 | # Copyright 2016 The TensorFlow Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applica... | apache-2.0 |
lordkman/burnman | misc/pyrolite_uncertainty.py | 5 | 38404 | from __future__ import absolute_import
from __future__ import print_function
# This file is part of BurnMan - a thermoelastic and thermodynamic toolkit for the Earth and Planetary Sciences
# Copyright (C) 2012 - 2015 by the BurnMan team, released under the GNU
# GPL v2 or later.
import os.path
import sys
if not os.pa... | gpl-2.0 |
ofrei/ldsc | ldsc.py | 1 | 33879 | #!/usr/bin/env python
'''
(c) 2014 Brendan Bulik-Sullivan and Hilary Finucane
LDSC is a command line tool for estimating
1. LD Score
2. heritability / partitioned heritability
3. genetic covariance / correlation
'''
from __future__ import division
import ldscore.ldscore as ld
import ldscore.parse as ps
im... | gpl-3.0 |
kirichoi/tellurium | tellurium/sedml/tesedml.py | 1 | 82282 | # -*- coding: utf-8 -*-
"""
Tellurium SED-ML support.
This module implements SED-ML support for tellurium.
----------------
Overview SED-ML
----------------
SED-ML is build of main classes
the Model Class,
the Simulation Class,
the Task Class,
the DataGenerator Class,
and the Output Class.
The Mo... | apache-2.0 |
pv/scikit-learn | sklearn/externals/joblib/parallel.py | 86 | 35087 | """
Helpers for embarrassingly parallel code.
"""
# Author: Gael Varoquaux < gael dot varoquaux at normalesup dot org >
# Copyright: 2010, Gael Varoquaux
# License: BSD 3 clause
from __future__ import division
import os
import sys
import gc
import warnings
from math import sqrt
import functools
import time
import thr... | bsd-3-clause |
webmasterraj/FogOrNot | flask/lib/python2.7/site-packages/pandas/tseries/tests/test_period.py | 2 | 119392 | """Tests suite for Period handling.
Parts derived from scikits.timeseries code, original authors:
- Pierre Gerard-Marchant & Matt Knox
- pierregm_at_uga_dot_edu - mattknow_ca_at_hotmail_dot_com
"""
from datetime import datetime, date, timedelta
from numpy.ma.testutils import assert_equal
from pandas import Timesta... | gpl-2.0 |
PatrickOReilly/scikit-learn | sklearn/cluster/k_means_.py | 5 | 59442 | """K-means clustering"""
# Authors: Gael Varoquaux <gael.varoquaux@normalesup.org>
# Thomas Rueckstiess <ruecksti@in.tum.de>
# James Bergstra <james.bergstra@umontreal.ca>
# Jan Schlueter <scikit-learn@jan-schlueter.de>
# Nelle Varoquaux
# Peter Prettenhofer <peter.prettenh... | bsd-3-clause |
xyguo/scikit-learn | sklearn/tree/tests/test_tree.py | 32 | 52369 | """
Testing for the tree module (sklearn.tree).
"""
import pickle
from functools import partial
from itertools import product
import platform
import numpy as np
from scipy.sparse import csc_matrix
from scipy.sparse import csr_matrix
from scipy.sparse import coo_matrix
from sklearn.random_projection import sparse_rand... | bsd-3-clause |
ritviksahajpal/LUH2 | LUH2/GlobalCropRotations/crop_stats.py | 1 | 44843 | import logging
import os
import pdb
import sys
import matplotlib.pyplot as plt
import numpy as np
import pandas as pd
import pygeoutil.util as util
import GLM.constants as constants_glm
import constants
import plots
reload(sys)
sys.setdefaultencoding('utf-8')
pd.options.mode.chained_assignment = None # default='war... | mit |
alexsavio/scikit-learn | sklearn/ensemble/gradient_boosting.py | 6 | 74941 | """Gradient Boosted Regression Trees
This module contains methods for fitting gradient boosted regression trees for
both classification and regression.
The module structure is the following:
- The ``BaseGradientBoosting`` base class implements a common ``fit`` method
for all the estimators in the module. Regressio... | bsd-3-clause |
pkruskal/scikit-learn | sklearn/metrics/tests/test_common.py | 83 | 41144 | from __future__ import division, print_function
from functools import partial
from itertools import product
import numpy as np
import scipy.sparse as sp
from sklearn.datasets import make_multilabel_classification
from sklearn.preprocessing import LabelBinarizer
from sklearn.utils.multiclass import type_of_target
fro... | bsd-3-clause |
awsteiner/o2sclpy | o2sclpy/doc_data.py | 1 | 39617 | from o2sclpy.utils import terminal
ter=terminal()
version='0.926.a1'
cmaps=[('Perceptually Uniform Sequential',
['viridis','plasma','inferno','magma']),
('Sequential',
['Greys','Purples','Blues','Greens','Oranges','Reds',
'YlOrBr','YlOrRd','OrRd','PuRd','RdPu','BuPu',
'GnBu'... | gpl-3.0 |
krikru/tensorflow-opencl | tensorflow/contrib/learn/python/learn/estimators/linear_test.py | 6 | 64222 | # Copyright 2016 The TensorFlow Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applica... | apache-2.0 |
chaluemwut/fbserver | venv/lib/python2.7/site-packages/sklearn/metrics/tests/test_metrics.py | 1 | 104453 | from __future__ import division, print_function
import numpy as np
from functools import partial
from itertools import product
import warnings
from sklearn import datasets
from sklearn import svm
from sklearn import ensemble
from sklearn.preprocessing import LabelBinarizer, MultiLabelBinarizer
from sklearn.datasets ... | apache-2.0 |
jblackburne/scikit-learn | sklearn/metrics/cluster/supervised.py | 11 | 33436 | """Utilities to evaluate the clustering performance of models.
Functions named as *_score return a scalar value to maximize: the higher the
better.
"""
# Authors: Olivier Grisel <olivier.grisel@ensta.org>
# Wei LI <kuantkid@gmail.com>
# Diego Molla <dmolla-aliod@gmail.com>
# Arnaud Fouchet ... | bsd-3-clause |
MTgeophysics/mtpy | mtpy/utils/shapefiles_creator.py | 1 | 35249 | #! /usr/bin/env python
"""
Description:
Create shape files for Phase Tensor Ellipses, Tipper Real/Imag.
export the phase tensor map and tippers into jpeg/png images
CreationDate: 2017-03-06
Developer: fei.zhang@ga.gov.au
Revision History:
LastUpdate: 10/11/2017 FZ fix bugs after the big merge... | gpl-3.0 |
btabibian/scikit-learn | sklearn/externals/joblib/parallel.py | 24 | 33170 | """
Helpers for embarrassingly parallel code.
"""
# Author: Gael Varoquaux < gael dot varoquaux at normalesup dot org >
# Copyright: 2010, Gael Varoquaux
# License: BSD 3 clause
from __future__ import division
import os
import sys
from math import sqrt
import functools
import time
import threading
import itertools
fr... | bsd-3-clause |
HolgerPeters/scikit-learn | sklearn/mixture/tests/test_gaussian_mixture.py | 26 | 40216 | # Author: Wei Xue <xuewei4d@gmail.com>
# Thierry Guillemot <thierry.guillemot.work@gmail.com>
# License: BSD 3 clauseimport warnings
import sys
import warnings
import numpy as np
from scipy import stats, linalg
from sklearn.covariance import EmpiricalCovariance
from sklearn.datasets.samples_generator import... | bsd-3-clause |
rhyolight/nupic | external/linux32/lib/python2.6/site-packages/matplotlib/mlab.py | 69 | 104273 | """
Numerical python functions written for compatability with matlab(TM)
commands with the same names.
Matlab(TM) compatible functions
-------------------------------
:func:`cohere`
Coherence (normalized cross spectral density)
:func:`csd`
Cross spectral density uing Welch's average periodogram
:func:`detrend`... | agpl-3.0 |
atechnicolorskye/Stratospheric-UAV-Simulator | gfs_data_simulator_local.py | 1 | 100831 | """
gfs_data_simulator_local.py
GFS Local Data Simulator
DESCRIPTION
-----------
GFS Data Local Simulator Module:
This module simulates the descent of a UAV through multiple atmopsheric layers. The properties of the layers are obtained from National
Oceanic and Atmospheric Administration's (NOAA) Global Forecast Sys... | gpl-2.0 |
lheagy/casingResearch | casingSimulations/sources.py | 2 | 32188 | import numpy as np
import matplotlib.pyplot as plt
import os
import properties
import discretize
from discretize.utils import closestPoints
from SimPEG.utils import setKwargs
from SimPEG.electromagnetics import frequency_domain as fdem
from SimPEG.electromagnetics import time_domain as tdem
from .base import Loadabl... | mit |
cligs/tmw | tmw.py | 1 | 81506 | #!/usr/bin/env python3
# -*- coding: utf-8 -*-
# Filename: tmw.py
# Authors: christofs, daschloer
# Version 0.3.0 (2016-03-20)
##################################################################
### Topic Modeling Workflow (tmw) ###
##########################################################... | mit |
OLAPLINE/TM1py | Tests/Utils.py | 1 | 41892 | import configparser
import json
from pathlib import Path
import unittest
import uuid
import pandas as pd
from TM1py import Subset
from TM1py.Objects import Process, Dimension, Hierarchy, Cube
from TM1py.Services import TM1Service
from TM1py.Utils import TIObfuscator
from TM1py.Utils import Utils, MDXUtils
from TM1py.... | mit |
ammarkhann/FinalSeniorCode | lib/python2.7/site-packages/pandas/tests/indexes/common.py | 4 | 35247 | # -*- coding: utf-8 -*-
import pytest
from pandas import compat
from pandas.compat import PY3
import numpy as np
from pandas import (Series, Index, Float64Index, Int64Index, UInt64Index,
RangeIndex, MultiIndex, CategoricalIndex, DatetimeIndex,
TimedeltaIndex, PeriodIndex, Int... | mit |
tangyouze/tushare | tushare/datayes/macro.py | 17 | 191349 | # -*- coding:utf-8 -*-
"""
通联数据
Created on 2015/08/24
@author: Jimmy Liu
@group : waditu
@contact: jimmysoa@sina.cn
"""
from pandas.compat import StringIO
import pandas as pd
from tushare.util import vars as vs
from tushare.util.common import Client
from tushare.util import upass as up
class Macro():
def __... | bsd-3-clause |
gcarq/freqtrade | tests/optimize/test_backtesting.py | 1 | 36022 | # pragma pylint: disable=missing-docstring, W0212, line-too-long, C0103, unused-argument
import random
from pathlib import Path
from unittest.mock import MagicMock, PropertyMock
import numpy as np
import pandas as pd
import pytest
from arrow import Arrow
from freqtrade import constants
from freqtrade.commands.optimi... | gpl-3.0 |
MTgeophysics/mtpy | mtpy/modeling/ws3dinv.py | 1 | 280366 | # -*- coding: utf-8 -*-
"""
===============
ws3dinv
===============
* Deals with input and output files for ws3dinv written by:
Siripunvaraporn, W.; Egbert, G.; Lenbury, Y. & Uyeshima, M.
Three-dimensional magnetotelluric inversion: data-space method
Physics of The Earth and Planetary Inte... | gpl-3.0 |
dimroc/tensorflow-mnist-tutorial | lib/python3.6/site-packages/matplotlib/backend_bases.py | 6 | 111196 | """
Abstract base classes define the primitives that renderers and
graphics contexts must implement to serve as a matplotlib backend
:class:`RendererBase`
An abstract base class to handle drawing/rendering operations.
:class:`FigureCanvasBase`
The abstraction layer that separates the
:class:`matplotlib.fi... | apache-2.0 |
macks22/scikit-learn | sklearn/linear_model/tests/test_sgd.py | 129 | 43401 | import pickle
import unittest
import numpy as np
import scipy.sparse as sp
from sklearn.utils.testing import assert_array_equal
from sklearn.utils.testing import assert_almost_equal
from sklearn.utils.testing import assert_array_almost_equal
from sklearn.utils.testing import assert_greater
from sklearn.utils.testing ... | bsd-3-clause |
PyPSA/PyPSA | pypsa/linopf.py | 1 | 45233 | ## Copyright 2019 Tom Brown (KIT), Fabian Hofmann (FIAS)
## This program is free software; you can redistribute it and/or
## modify it under the terms of the GNU General Public License as
## published by the Free Software Foundation; either version 3 of the
## License, or (at your option) any later version.
## This p... | gpl-3.0 |
gojira/tensorflow | tensorflow/python/estimator/canned/dnn_linear_combined_test.py | 11 | 33691 | # Copyright 2017 The TensorFlow Authors. All Rights Reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
# http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applica... | apache-2.0 |
RRCKI/panda-jedi | pandajedi/jedibrokerage/AtlasProdTaskBroker.py | 1 | 40285 | import re
import sys
import random
import traceback
from pandajedi.jedicore.MsgWrapper import MsgWrapper
from pandajedi.jedicore import Interaction
from TaskBrokerBase import TaskBrokerBase
from pandajedi.jedicore.ThreadUtils import ListWithLock,ThreadPool,WorkerThread,MapWithLock
import AtlasBrokerUtils
from AtlasPro... | apache-2.0 |
JPFrancoia/scikit-learn | sklearn/ensemble/forest.py | 14 | 67896 | """Forest of trees-based ensemble methods
Those methods include random forests and extremely randomized trees.
The module structure is the following:
- The ``BaseForest`` base class implements a common ``fit`` method for all
the estimators in the module. The ``fit`` method of the base ``Forest``
class calls the ... | bsd-3-clause |
smeerten/ssnake | src/ssNake.py | 1 | 398261 | #!/usr/bin/env python
# -*- coding: utf-8 -*-
# Copyright 2016 - 2020 Bas van Meerten and Wouter Franssen
# This file is part of ssNake.
#
# ssNake is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either vers... | gpl-3.0 |
mueller-lab/PyFRAP | pyfrp/subclasses/pyfrp_fit.py | 2 | 30354 | #=====================================================================================================================================
#Copyright
#=====================================================================================================================================
#Copyright (C) 2014 Alexander Blaessle... | gpl-3.0 |
rkmaddox/mne-python | mne/fixes.py | 4 | 35959 | """Compatibility fixes for older versions of libraries
If you add content to this file, please give the version of the package
at which the fix is no longer needed.
# originally copied from scikit-learn
"""
# Authors: Emmanuelle Gouillart <emmanuelle.gouillart@normalesup.org>
# Gael Varoquaux <gael.varoquau... | bsd-3-clause |
themrmax/scikit-learn | sklearn/cluster/k_means_.py | 8 | 60187 | """K-means clustering"""
# Authors: Gael Varoquaux <gael.varoquaux@normalesup.org>
# Thomas Rueckstiess <ruecksti@in.tum.de>
# James Bergstra <james.bergstra@umontreal.ca>
# Jan Schlueter <scikit-learn@jan-schlueter.de>
# Nelle Varoquaux
# Peter Prettenhofer <peter.prettenh... | bsd-3-clause |
zzcclp/spark | python/pyspark/pandas/utils.py | 9 | 34052 | #
# Licensed to the Apache Software Foundation (ASF) under one or more
# contributor license agreements. See the NOTICE file distributed with
# this work for additional information regarding copyright ownership.
# The ASF licenses this file to You under the Apache License, Version 2.0
# (the "License"); you may not us... | apache-2.0 |
leezu/mxnet | python/mxnet/numpy/multiarray.py | 1 | 408331 | #!/usr/bin/env python
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
# "L... | apache-2.0 |
pabryan/smc | src/build.py | 1 | 54952 | #!/usr/bin/env python
###############################################################################
#
# SageMathCloud: A collaborative web-based interface to Sage, IPython, LaTeX and the Terminal.
#
# Copyright (C) 2014-2015, William Stein
#
# This program is free software: you can redistribute it and/or modify... | gpl-3.0 |
informatics-isi-edu/deriva-py | tests/deriva/core/test_datapath.py | 1 | 35124 | # Tests for the datapath module.
#
# Environment variables:
# DERIVA_PY_TEST_HOSTNAME: hostname of the test server
# DERIVA_PY_TEST_CREDENTIAL: user credential, if none, it will attempt to get credentail for given hostname
# DERIVA_PY_TEST_VERBOSE: set for verbose logging output to stdout
from copy import deepcopy
... | apache-2.0 |
Aegeaner/spark | python/pyspark/sql/types.py | 1 | 67445 | #
# Licensed to the Apache Software Foundation (ASF) under one or more
# contributor license agreements. See the NOTICE file distributed with
# this work for additional information regarding copyright ownership.
# The ASF licenses this file to You under the Apache License, Version 2.0
# (the "License"); you may not us... | apache-2.0 |
byuflowlab/gaussian-wake | doc/compare_all_sowfa.py | 1 | 44719 | import numpy as np
import matplotlib.pyplot as plt
from scipy.io import loadmat
import cPickle as pickle
from openmdao.api import Problem
from wakeexchange.OptimizationGroups import OptAEP
from wakeexchange.gauss import gauss_wrapper, add_gauss_params_IndepVarComps
from wakeexchange.floris import floris_wrapper, add_... | apache-2.0 |
tejasnikumbh/ThesisCode | lib/python2.7/site-packages/numpy/linalg/linalg.py | 35 | 67345 | """Lite version of scipy.linalg.
Notes
-----
This module is a lite version of the linalg.py module in SciPy which
contains high-level Python interface to the LAPACK library. The lite
version only accesses the following LAPACK functions: dgesv, zgesv,
dgeev, zgeev, dgesdd, zgesdd, dgelsd, zgelsd, dsyevd, zheevd, dgetr... | mit |
GuessWhoSamFoo/pandas | pandas/io/pytables.py | 1 | 168497 | # pylint: disable-msg=E1101,W0613,W0603
"""
High level interface to PyTables for reading and writing pandas data structures
to disk
"""
import copy
from datetime import date, datetime
from distutils.version import LooseVersion
import itertools
import os
import re
import time
import warnings
import numpy as np
from p... | bsd-3-clause |
cbmoore/statsmodels | statsmodels/regression/tests/test_robustcov.py | 25 | 31412 | # -*- coding: utf-8 -*-
"""Testing OLS robust covariance matrices against STATA
Created on Mon Oct 28 15:25:14 2013
Author: Josef Perktold
"""
import numpy as np
from scipy import stats
from numpy.testing import (assert_allclose, assert_equal, assert_warns,
assert_raises)
from statsmode... | bsd-3-clause |
PanDAWMS/pilot | RunJob.py | 1 | 98438 | # Class definition:
# RunJob
# This is the main RunJob class; RunJobEvent etc will inherit from this class
# Note: at the moment, this class is essentially the old runJob module turned object oriented.
# The class will later become RunJobNormal, ie responible for running normal PanDA jobs.
# At th... | apache-2.0 |
pjryan126/solid-start-careers | store/api/zillow/venv/lib/python2.7/site-packages/pandas/io/tests/test_pytables.py | 1 | 202104 | import nose
import sys
import os
import warnings
import tempfile
from contextlib import contextmanager
import datetime
import numpy as np
import pandas
import pandas as pd
from pandas import (Series, DataFrame, Panel, MultiIndex, Int64Index,
RangeIndex, Categorical, bdate_range,
... | gpl-2.0 |
wasade/american-gut-web | amgut/lib/locale_data/american_gut.py | 1 | 136152 | #!/usr/bin/env python
from __future__ import division
from amgut.lib.config_manager import AMGUT_CONFIG
# -----------------------------------------------------------------------------
# Copyright (c) 2014--, The American Gut Project Development Team.
#
# Distributed under the terms of the BSD 3-clause License.
#
# The... | bsd-3-clause |
bblay/iris | lib/iris/unit.py | 2 | 60011 | # (C) British Crown Copyright 2010 - 2013, Met Office
#
# This file is part of Iris.
#
# Iris is free software: you can redistribute it and/or modify it under
# the terms of the GNU Lesser General Public License as published by the
# Free Software Foundation, either version 3 of the License, or
# (at your option) any l... | gpl-3.0 |
C2SM/hymet_idealized | neatpostproc_user.py | 1 | 69273 | # This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
# This program is distributed in the hope that it will be useful... | lgpl-3.0 |
DailyActie/Surrogate-Model | 01-codes/scipy-master/scipy/interpolate/interpolate.py | 1 | 101080 | """ Classes for interpolating values.
"""
from __future__ import division, print_function, absolute_import
__all__ = ['interp1d', 'interp2d', 'spline', 'spleval', 'splmake', 'spltopp',
'ppform', 'lagrange', 'PPoly', 'BPoly', 'NdPPoly',
'RegularGridInterpolator', 'interpn']
import itertools
impor... | mit |
louisLouL/pair_trading | capstone_env/lib/python3.6/site-packages/matplotlib/backends/backend_tkagg.py | 2 | 39111 | # Todd Miller jmiller@stsci.edu
from __future__ import (absolute_import, division, print_function,
unicode_literals)
import six
from six.moves import tkinter as Tk
from six.moves import tkinter_filedialog as FileDialog
import os, sys, math
import os.path
# Paint image to Tk photo blitter ex... | mit |
futurulus/scipy | scipy/spatial/kdtree.py | 11 | 37913 | # Copyright Anne M. Archibald 2008
# Released under the scipy license
from __future__ import division, print_function, absolute_import
import sys
import numpy as np
from heapq import heappush, heappop
import scipy.sparse
__all__ = ['minkowski_distance_p', 'minkowski_distance',
'distance_matrix',
... | bsd-3-clause |
matthewalbani/scipy | scipy/interpolate/interpolate.py | 4 | 106038 | """ Classes for interpolating values.
"""
from __future__ import division, print_function, absolute_import
__all__ = ['interp1d', 'interp2d', 'spline', 'spleval', 'splmake', 'spltopp',
'ppform', 'lagrange', 'PPoly', 'BPoly', 'NdPPoly',
'RegularGridInterpolator', 'interpn']
import itertools
fro... | bsd-3-clause |
CanisMajoris/ThinkStats2 | code/thinkstats2.py | 68 | 68825 | """This file contains code for use with "Think Stats" and
"Think Bayes", both by Allen B. Downey, available from greenteapress.com
Copyright 2014 Allen B. Downey
License: GNU GPLv3 http://www.gnu.org/licenses/gpl.html
"""
from __future__ import print_function, division
"""This file contains class definitions for:
H... | gpl-3.0 |
kalvdans/scipy | scipy/special/basic.py | 2 | 71090 | #
# Author: Travis Oliphant, 2002
#
from __future__ import division, print_function, absolute_import
import warnings
import numpy as np
import math
from scipy._lib.six import xrange
from numpy import (pi, asarray, floor, isscalar, iscomplex, real,
imag, sqrt, where, mgrid, sin, place, issubdtype,... | bsd-3-clause |
css-lucas/GAT | gat/core/sna/SNAcityUpdate.py | 1 | 33078 | import tempfile
import matplotlib.pyplot as plt
import networkx as nx
import numpy as np
import xlrd
from networkx.algorithms import bipartite as bi
from networkx.algorithms import centrality
from itertools import product
from collections import defaultdict
import pandas as pd
import datetime
from gat.core.sna import ... | mit |
pv/scikit-learn | sklearn/utils/estimator_checks.py | 41 | 47834 | from __future__ import print_function
import types
import warnings
import sys
import traceback
import inspect
import pickle
from copy import deepcopy
import numpy as np
from scipy import sparse
import struct
from sklearn.externals.six.moves import zip
from sklearn.externals.joblib import hash, Memory
from sklearn.ut... | bsd-3-clause |
ryfeus/lambda-packs | Sklearn_scipy_numpy/source/numpy/linalg/linalg.py | 32 | 75738 | """Lite version of scipy.linalg.
Notes
-----
This module is a lite version of the linalg.py module in SciPy which
contains high-level Python interface to the LAPACK library. The lite
version only accesses the following LAPACK functions: dgesv, zgesv,
dgeev, zgeev, dgesdd, zgesdd, dgelsd, zgelsd, dsyevd, zheevd, dgetr... | mit |
ryfeus/lambda-packs | LightGBM_sklearn_scipy_numpy/source/sklearn/utils/estimator_checks.py | 3 | 66863 | from __future__ import print_function
import types
import warnings
import sys
import traceback
import pickle
from copy import deepcopy
import numpy as np
from scipy import sparse
from scipy.stats import rankdata
import struct
from sklearn.externals.six.moves import zip
from sklearn.externals.joblib import hash, Memor... | mit |
tetherless-world/ecoop | pyecoop/lib/ecoop/cf.py | 1 | 36336 | # /usr/bin/env python
# -*- coding: utf-8 -*-
# ##############################################################################
#
#
# Project: ECOOP, sponsored by The National Science Foundation
# Purpose: this code is part of the Cyberinfrastructure developed for the ECOOP project
# http://tw.rpi.edu/web/project/ECOOP... | apache-2.0 |
clawpack/seismic | 2d/sloping_fault_water/dtopotools_horiz_okada.py | 2 | 80673 | #!/usr/bin/env python
# encoding: utf-8
r"""
GeoClaw dtopotools Module `$CLAW/geoclaw/src/python/geoclaw/dtopotools.py`
Module provides several functions for dealing with changes to topography (usually
due to earthquakes) including reading sub-fault specifications, writing out
dtopo files, and calculating Okada bas... | bsd-2-clause |
mikestock/intf-tools | xintf.py | 1 | 41182 | #!/usr/bin/python
import matplotlib
matplotlib.use('WXAgg')
from matplotlib.backends.backend_wxagg import FigureCanvasWxAgg as FigureCanvas
from matplotlib.backends.backend_wx import NavigationToolbar2Wx
from matplotlib.figure import Figure, SubplotParams
from matplotlib.widgets import SpanSelector, RectangleSelector... | gpl-2.0 |
shahankhatch/scikit-learn | sklearn/linear_model/stochastic_gradient.py | 65 | 50308 | # Authors: Peter Prettenhofer <peter.prettenhofer@gmail.com> (main author)
# Mathieu Blondel (partial_fit support)
#
# License: BSD 3 clause
"""Classification and regression using Stochastic Gradient Descent (SGD)."""
import numpy as np
import scipy.sparse as sp
from abc import ABCMeta, abstractmethod
from ... | bsd-3-clause |
mhvk/numpy | numpy/lib/histograms.py | 8 | 40215 | """
Histogram-related functions
"""
import contextlib
import functools
import operator
import warnings
import numpy as np
from numpy.core import overrides
__all__ = ['histogram', 'histogramdd', 'histogram_bin_edges']
array_function_dispatch = functools.partial(
overrides.array_function_dispatch, module='numpy')
... | bsd-3-clause |
datapythonista/pandas | versioneer.py | 4 | 70101 | # Version: 0.19
"""The Versioneer - like a rocketeer, but for versions.
The Versioneer
==============
* like a rocketeer, but for versions!
* https://github.com/python-versioneer/python-versioneer
* Brian Warner
* License: Public Domain
* Compatible with: Python 3.6, 3.7, 3.8, 3.9 and pypy3
* [![Latest Version][pypi... | bsd-3-clause |
sid88in/incubator-airflow | airflow/www/views.py | 1 | 113062 | # -*- coding: utf-8 -*-
#
# Licensed to the Apache Software Foundation (ASF) under one
# or more contributor license agreements. See the NOTICE file
# distributed with this work for additional information
# regarding copyright ownership. The ASF licenses this file
# to you under the Apache License, Version 2.0 (the
#... | apache-2.0 |
jm-begon/scikit-learn | doc/sphinxext/gen_rst.py | 142 | 40026 | """
Example generation for the scikit learn
Generate the rst files for the examples by iterating over the python
example files.
Files that generate images should start with 'plot'
"""
from __future__ import division, print_function
from time import time
import ast
import os
import re
import shutil
import traceback
i... | bsd-3-clause |
effigies/mne-python | mne/coreg.py | 1 | 38779 | """Coregistration between different coordinate frames"""
# Authors: Christian Brodbeck <christianbrodbeck@nyu.edu>
#
# License: BSD (3-clause)
from .externals.six.moves import configparser
import fnmatch
from glob import glob, iglob
import os
import stat
import sys
import re
import shutil
from warnings import warn
i... | bsd-3-clause |
clemkoa/scikit-learn | sklearn/model_selection/_search.py | 8 | 56392 | """
The :mod:`sklearn.model_selection._search` includes utilities to fine-tune the
parameters of an estimator.
"""
from __future__ import print_function
from __future__ import division
# Author: Alexandre Gramfort <alexandre.gramfort@inria.fr>,
# Gael Varoquaux <gael.varoquaux@normalesup.org>
# Andreas... | bsd-3-clause |
bnaul/scikit-learn | sklearn/decomposition/_nmf.py | 2 | 47427 | """ Non-negative matrix factorization
"""
# Author: Vlad Niculae
# Lars Buitinck
# Mathieu Blondel <mathieu@mblondel.org>
# Tom Dupre la Tour
# License: BSD 3 clause
import numbers
import numpy as np
import scipy.sparse as sp
import time
import warnings
from math import sqrt
from ._cdnmf_fast ... | bsd-3-clause |
daodaoliang/neural-network-animation | matplotlib/finance.py | 10 | 51311 | """
A collection of functions for collecting, analyzing and plotting
financial data. User contributions welcome!
This module is deprecated in 1.4 and will be moved to `mpl_toolkits`
or it's own project in the future.
"""
from __future__ import (absolute_import, division, print_function,
unic... | mit |
anntzer/scikit-learn | sklearn/utils/tests/test_extmath.py | 1 | 30713 | # Authors: Olivier Grisel <olivier.grisel@ensta.org>
# Mathieu Blondel <mathieu@mblondel.org>
# Denis Engemann <denis-alexander.engemann@inria.fr>
#
# License: BSD 3 clause
import numpy as np
from scipy import sparse
from scipy import linalg
from scipy import stats
from scipy.special import expit
im... | bsd-3-clause |
WangWenjun559/Weiss | summary/sumy/sklearn/metrics/tests/test_classification.py | 15 | 49665 | from __future__ import division, print_function
import numpy as np
from scipy import linalg
from functools import partial
from itertools import product
import warnings
from sklearn import datasets
from sklearn import svm
from sklearn.datasets import make_multilabel_classification
from sklearn.preprocessing import La... | apache-2.0 |
mjfarmer/scada_py | env/lib/python2.7/site-packages/IPython/core/interactiveshell.py | 6 | 132557 | # -*- coding: utf-8 -*-
"""Main IPython class."""
#-----------------------------------------------------------------------------
# Copyright (C) 2001 Janko Hauser <jhauser@zscout.de>
# Copyright (C) 2001-2007 Fernando Perez. <fperez@colorado.edu>
# Copyright (C) 2008-2011 The IPython Development Team
#
# Distribu... | gpl-3.0 |
Titan-C/scikit-learn | sklearn/ensemble/tests/test_gradient_boosting.py | 21 | 41305 | """
Testing for the gradient boosting module (sklearn.ensemble.gradient_boosting).
"""
import warnings
import numpy as np
from itertools import product
from scipy.sparse import csr_matrix
from scipy.sparse import csc_matrix
from scipy.sparse import coo_matrix
from sklearn import datasets
from sklearn.base import clo... | bsd-3-clause |
DuCorey/bokeh | bokeh/core/properties.py | 2 | 64367 | ''' Properties are objects that can be assigned as class attributes on Bokeh
models, to provide automatic serialization, validation, and documentation.
This documentation is broken down into the following sections:
.. contents::
:local:
Overview
--------
There are many property types defined in the module, for ... | bsd-3-clause |
Martin09/E-BeamPatterns | 111 Wafers - 1.2cm Triangles/111A Nanowires/v1.3/gdsCAD_v045/templates111.py | 2 | 33363 | # -*- coding: utf-8 -*-
"""
Templates for automating the design of different wafer styles.
.. note::
Copyright 2009-2012 Lucas Heitzmann Gabrielli
Copyright 2013 Andrew G. Mark
gdsCAD (based on gdspy) is released under the terms of the GNU GPL
"""
# TODO: Make it more pythonic, create separate c... | gpl-3.0 |
guilgautier/DPPy | dppy/multivariate_jacobi_ope.py | 1 | 36593 | # coding: utf8
""" Implementation of the class :class:`MultivariateJacobiOPE` used in :cite:`GaBaVa19` for Monte Carlo with Determinantal Point Processes
It has 3 main methods:
- :py:meth:`~dppy.multivariate_jacobi_ope.MultivariateJacobiOPE.sample` to generate samples
- :py:meth:`~dppy.multivariate_jacobi_ope.Multiva... | mit |
gertingold/scipy | scipy/cluster/tests/test_hierarchy.py | 11 | 41545 | #
# Author: Damian Eads
# Date: April 17, 2008
#
# Copyright (C) 2008 Damian Eads
#
# Redistribution and use in source and binary forms, with or without
# modification, are permitted provided that the following conditions
# are met:
#
# 1. Redistributions of source code must retain the above copyright
# notice, this... | bsd-3-clause |
nistats/nistats | nistats/first_level_model.py | 1 | 42594 | """
This module presents an interface to use the glm implemented in
nistats.regression.
It contains the GLM and contrast classes that are meant to be the main objects
of fMRI data analyses.
Author: Bertrand Thirion, Martin Perez-Guevara, 2016
"""
import glob
import json
import os
import sys
import time
from warnings... | bsd-3-clause |
feilchenfeldt/enrichme | enrichme.py | 1 | 51923 | #!/usr/bin/env python
"""
TODO:
-- fix the gene summary mode so that is supports overlapping features
(necessary to implement max_dist argument)
DONE?
-- allow prior windowing of input data for better performance
-- ask magnus about applications
In top scores enrichment:
If data is on a grid: do not keep the ... | mit |
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