reference stringlengths 7 774 ⌀ | aptamer_chemistry stringclasses 21
values | aptamer_name stringlengths 1 164 | target_name stringlengths 2 1.2k ⌀ | aptamer_sequence stringlengths 2 380 | origin stringclasses 6
values | target_chemistry stringclasses 11
values | external_id stringclasses 509
values | target_sequence stringclasses 357
values | new_affinity stringlengths 3 193 ⌀ |
|---|---|---|---|---|---|---|---|---|---|
https://pubmed.ncbi.nlm.nih.gov/9035109/ | 2'-amino-RNA | 1N | Keratinocyte growth factor (hKGF), Human | GGGAGGACGAUGCGGGAAGGGACGAUAAAGAGGAAUCGAACAACAAGUGGCUGGCCAGACGACUCGCCCGA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 0.5 nM Ki: 16.7 nM, 0,5 |
https://pubmed.ncbi.nlm.nih.gov/9035109/ | 2'-amino-RNA | 29N | Keratinocyte growth factor (hKGF), Human | GGGAGGACGAUGCGGAGAAGAAUGCAGGAAACAGCGAAAUGCGUGUGGCCAGACGACUCGCCCGA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 0.43 nM Ki: 13.3 nM, 0,43 |
https://pubmed.ncbi.nlm.nih.gov/9035109/ | 2'-amino-RNA | 6N | Keratinocyte growth factor (hKGF), Human | GGGAGGACGAUGCGGGCAGGGAGCAAUGAACUCAAGUCAAGCCGGUGCACGUGGGCAGACGACUCGCCCGA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 0.7 nM Ki: 26.7 nM, 0,7 |
https://pubmed.ncbi.nlm.nih.gov/9035109/ | 2'-amino-RNA | 2N | Keratinocyte growth factor (hKGF), Human | GGGAGGACGAUGCGGGCGGGAAGGUCCGAAGACCGGCGAAAGGAACGAGAUUGCCCAGACGACUCGCCCGA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 0.8 nM Ki: 66.7 nM, 0,8 |
https://pubmed.ncbi.nlm.nih.gov/9035109/ | 2'-amino-RNA | 24N | Keratinocyte growth factor (hKGF), Human | GGGAGGACGAUGCGGGUGGGAAGAUGAGCCGGUCGGCAGUAAUGUGACACUGCGGCAGACGACUCGCCCGA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 1.2 nM, 1,2 |
https://pubmed.ncbi.nlm.nih.gov/9035104/ | 2'-amino-RNA | SE RNA | Monoclonal antibody 198 (Mab198) | GGGAGAGCGGAAGCGUGCUGGGCCGGAGGUUAGCUUGCCCAUGGCAAGCAGGGCGCCACGGACCCAUAACCCAGAGGUCGAUGGAUCCCCCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 60 nM, 60 |
https://pubmed.ncbi.nlm.nih.gov/9062133/ | ssDNA | DD18 | Neutrophil elastase (NE) | CACGATGGTTAGGCGGGCCTTGAGGCTAATAATGTTGTTA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/9062133/ | ssDNA | ED1 | Neutrophil elastase (NE) | CAGCGTCATTTAGGATTCGTCAGGTTCTACCCGTAGTGTG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/9062133/ | ssDNA | ED45 | Neutrophil elastase (NE) | CCTGCGTAACAACGCGGAGGAAACTTCCCTCCTATCTCT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/9062133/ | ssDNA | DD7 | Neutrophil elastase (NE) | GACTGCGTATCAACGCGGTGAAACCTAACCTCATCTTGAT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/9062133/ | ssDNA | ED38 | Neutrophil elastase (NE) | CACGGTAGTGCTACCAGATGGTTATGTTACTTCAATTCTG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/9062133/ | ssDNA | DD25 | Neutrophil elastase (NE) | CATGACAGAATGTCTGCAGAGCTAATCTTGGTCACTGAT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/9526554/ | 2'-amino-RNA | Aptamer 5 | Nonpancreatic secretory phospholipase A2 (hnps-PLA2), Human | GGGAAAAGCGAAUCAUACACAAGACGGCCGGCGCCAUAGCCGAGAUCCGAGGUGUUGAACGAUGACAACUCGGUGCUCCGCCAGAGACCAACCGAGAA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 0.5\u2009±\u20090.3, Ki: 0.2 nM , 0,5 |
https://pubmed.ncbi.nlm.nih.gov/9526554/ | 2'-amino-RNA | Aptamer 15 | Nonpancreatic secretory phospholipase A2 (hnps-PLA2), Human | GGGAAAAGAGACGGCCGGCGCCAUAGCCGAGAUCCGAGGUGUUGCCGAGAA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 1.7 ± 0.2 nM, IC50: 4 nM, Ki: 0.14 nM , 1,7 |
https://pubmed.ncbi.nlm.nih.gov/9512549/ | ssRNA | XBA RNA | Xanthine (2,6-dioxypurine) | GGCACGUGUAUUACCCUAGUGGUCGACGUGCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 3.3 µM, 3300 |
https://pubmed.ncbi.nlm.nih.gov/9512549/ | ssRNA | XBA RNA | Guanine | GGCACGUGUAUUACCCUAGUGGUCGACGUGCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 1.3 µM, 1300 |
https://pubmed.ncbi.nlm.nih.gov/9546673/ | ssRNA | APC-167 | Activated protein C (APC), Human | GGGAGAAUUCCGACCAGAAGCUUGUGAGACCAGCCGAGUGGUGUCUGGCUAUUCACUGGAGCGUGGGUGGAACCCCUGCGCACUCGUUUGGCUGUCCGGGCCUUCGGGCCGGGAUUAUCUCUUUGGGUUUUGUGAUUUGGUCAUAUGUGCGUCUACAUGGAUCCUCA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Ki: 83 ± 17 nM, nan |
https://pubmed.ncbi.nlm.nih.gov/9546673/ | ssRNA | APC-99 | Activated protein C (APC), Human | GUGAGACCAGCCGAGUGGUGUCUGGCUAUUCACUGGAGCGUGGGUGGAACCCCUGCGCACUCGUUUGGCUGUCCGGGCCUUCGGGCCGGGAUUAUCUCU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Ki: 137 ± 14 nM, nan |
https://pubmed.ncbi.nlm.nih.gov/9831529/ | ssDNA | clone 73 | Fluorophore sulforhodamine B | CGGGATCCTAATGACCAAGGGTGGGAGGGAGGGGGTCATTAAATCCAGTATCAACACGCCACGATGGGATCACCGCCATGGGCCGTCCCACTGGTGCCAGTCGGATAGTGTTCCTATAGTGAGTCGTATTAGAA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Reported , nan |
https://pubmed.ncbi.nlm.nih.gov/9831529/ | ssDNA | minimized clone 73 | Fluorophore sulforhodamine B | CCGGCCAAGGGTGGGAGGGAGGGGGGCCGG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Reported , nan |
https://pubmed.ncbi.nlm.nih.gov/9831529/ | ssDNA | clone 6 | Fluorophore sulforhodamine B | CGGGATCCTAATGACCAAGGCCAAGGGAGGCTCCTTGTTATTCAGCAGGTACTACTATCTGGGAAAGAATCCCGAGTGTGTAGATGTTCCTGGGTGCCAGTCGGATAGTGTTCCTATAGTGAGTCGTATTAGAA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Reported , nan |
https://pubmed.ncbi.nlm.nih.gov/9831529/ | ssDNA | clone 26 | Fluorophore sulforhodamine B | CGGGATCCTAATGACCAAGGGGCGGGGGTGGTGGGAGTCGAGGTCATGGGTTCCCTGCGGTTGCGGCTCAGGCAAGACAAATCGATTAGAGCGGTGCCAGTCGGATAGTGTTCCTATAGTGAGTCGTATTAGAA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Reported , nan |
https://pubmed.ncbi.nlm.nih.gov/9831529/ | ssDNA | clone 39 | Fluorophore sulforhodamine B | CGGGATCCTAATGACCAAGGGTGGGGGGGAGTGGAGGTTATTAGGTTCAGTAGTGCCAACTGCAGTCTAAGCGCGTCGCGAGTACACCTTCTGGTGCCAGTCGGATAGTGTTCCTATAGTGAGTCGTATTAGAA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Reported , nan |
https://pubmed.ncbi.nlm.nih.gov/9889155/ | ssRNA | SRB-2 | Fluorophore sulforhodamine B | GGAACACUAUCCGACUGGCACCUGUGCUCUAUAGCAGAAUGCUAACAUUAGAUGAUGGAGGGGCGCAAGGUUAACCGCCUCAGUACAUCGGUGCCUUGGUCAUUAGGAUCCCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 70 ± 10 nM, 70 |
https://pubmed.ncbi.nlm.nih.gov/9889155/ | ssRNA | FB-1 | Fluorescein | GGACGGCACCACGGUCGGAUCCGUGAGUUGUGACAAUUUAGCGGGUGGUAUUAGAGCCUACUGCCACAGCAAUAGGAUCGAUACAGAUCU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/9843415/ | ssDNA | clone 7 | Nuclear factor for human IL6 (NF-IL6) | CAGTGCTCTAGAGGATCCGTGACGGCCGACCGCACAGCACAACCCCGAAGCTTATCGATCCGAGCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kobs < 2nM, nan |
https://pubmed.ncbi.nlm.nih.gov/9843415/ | ssDNA | clone 8 | Nuclear factor for human IL6 (NF-IL6) | CAGTGCTCTAGAGGATCCGTGACGGGCCCGCTGTACATGCACACGCGAAGCTTATCGATCCGAGCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kobs < 2nM, nan |
https://pubmed.ncbi.nlm.nih.gov/9843415/ | ssDNA | clone 13 | Nuclear factor for human IL6 (NF-IL6) | CAGTGCTCTAGAGGATCCGTGACCCCGTTGTTGTCCCACTCCACGCGAAGCTTATCGATCCGAGCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kobs < 2nM, nan |
https://pubmed.ncbi.nlm.nih.gov/9576904/ | ssDNA | Cel#183 | Cellobiose | TAGCGGGTGTGGTGGGTGGGGGAGGCATGGTTTTTGGTAA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 10−7 to 10−5 M, 1000 |
https://pubmed.ncbi.nlm.nih.gov/9576904/ | ssDNA | Cel#202 | Cellobiose | GTCAAGGTGGGTGGGTGGGGTTGGTTGTTGTTTTGA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 10−7 to 10−5 M, 1000 |
https://pubmed.ncbi.nlm.nih.gov/9603938/ | ssRNA | N30yc5 | Protein tyrosine phosphatases (PTPase) ( Yop51*Δ162 ), Yersinia | GGGAAUGGAUCCACAUCUACGUAUUACUGCUGGUGACGAGGGCUAGACGACGUACCUUCACUGCAGACUUGACGAAGCUU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 28 ± 12 nM, 28 |
https://pubmed.ncbi.nlm.nih.gov/9603938/ | ssRNA | N71yc16 | Protein tyrosine phosphatases (PTPase) ( Yop51*Δ162 ), Yersinia | GGGAGAUACCAGCUUAUUCAAUUCUGGCAAUGGGCUAUCCCAAGUGCUAGGCUUCAGGGAGCGAGGACCAGACGACGUACCUAACCCUAAGGUGAGAUAGUAAGUGCAAUCU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 18 ± 2.9 nM, 18 |
https://pubmed.ncbi.nlm.nih.gov/9883908/ | ssRNA | 21.01 | Glutathione S-transferase-fused RBD (GST-RBD) Ras-binding domain (Raf-1 RBD) | GGGAGAUCAGAAUAAACGCUCAACUGAUCAAUGGCGUACAAUGGAUUCGUUCUCAUAACCAAAACCCUUACCCCUUGGACUGAUUCGACAUGAGGCCCCUGCAGGGCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 332 ± 93 nM, 332 |
https://pubmed.ncbi.nlm.nih.gov/9883908/ | ssRNA | 21.07 | Glutathione S-transferase-fused RBD (GST-RBD) Ras-binding domain (Raf-1 RBD) | GGGAGAUCAGAAUAAACGCUCAAUUGACUCAAUGGCGUACAAUGGAUUCGUUCUCAUAACCAAAACCCUUACCCCUUGGACUGUUCGACAUGAGGCCCCUGCAGGGCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 332 ± 93 nM, 332 |
https://pubmed.ncbi.nlm.nih.gov/9425088/ | ssRNA | J6f1 | Tobramycin | GGCUUAGUAUAGCGAGGUUUAGCUACACUCGUGCUGAGCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 5.15 ± 1.52 nM, 5,15 |
https://pubmed.ncbi.nlm.nih.gov/9873529/ | ssRNA | ps11-20 | Recombinant basic fibroblast growth factor (bFGF), Human | GGGAAUGGAUCCACAUCUACGAAUUCAAUCCCAAUGGCUUGAACUGCCAACGAACGUUCACUGCAGACUUGACGAAGCUU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 1.8 ± 0.8 nM, 1,8 |
https://pubmed.ncbi.nlm.nih.gov/9436913/ | ssRNA | C #128 | Streptomycin | GGAGCUCAGCCUUCACUGCACCCCUUUGUGGGAACGCAAAACUAAAGGAAGAUCUCAAGAAAGGUGGAUCGCAUUUGGACUUCUGCCCAGGGUGGCACCACGGUCGGAUCCAC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/9436913/ | ssRNA | C #128 (46 mer) | Streptomycin | GGAUCGCAUUUGGACUUCUGCCCAGGGUGGCACCACGGUCGGAUCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/9436913/ | ssRNA | B # 84 | Streptomycin | GGAGCUCAGCCUUCACUGCCAGACAGUAGAGGGAAGUGUGAGCUAUCACCUCAAGGAAAACGCUUCAGAAAGGGACUUAGGUGAUGAUAGUGUGGCACCACGGUCGGAUCCAC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/9436913/ | ssRNA | B #84 (41 mer) | Streptomycin | AUCACCUCAAGGAAAACGCUUCAGAAAGGGACUUAGGUGAU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/10473594/ | ssDNA | 29A-OH | Nucleolin | TTTGGTGGTGGTGGTTGTGGTGGTGGTGG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/10496219/ | ssRNA | clone 488 | SelB protein, Escherichia coli | GCGCUAAGUCCUCGCUCAGCCCAUAAGUUGUCCCAAGUCUUGGGCGCAAAUACAUCCCACGCGCGACUCGGAUCCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/10449422/ | ssRNA | B2 | Phenylalanine tRNA, Yeast | GGGAAUUCCGCGUGUGCUACGUAUCUUCAGGCGGUAACUAACUGUGCUGAGUCUAAUCUUUGUGAGGGACGGUAACAUAUGGUUCCCGCGUGGUCCGUUCGGGAUCCUC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | binding efficiency: recovery as percentage of load: 66%; Kd: 12 ± 1.2 nM, 12 |
https://pubmed.ncbi.nlm.nih.gov/10449422/ | ssRNA | B3 | Phenylalanine tRNA, Yeast | GGGAAUUCCGCGUGUGCAAGCCUGUCGUGUGAACCUUGGUAGUCUUCAGAUACCAUUCUAGCCACGAGAGACUACGACACUGCUCCGUCGCCCGUCCGUUCGGGAUCCUC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | binding efficiency: recovery as percentage of load: 55%; Kd: 26 ± 1.4 nM, 26 |
https://pubmed.ncbi.nlm.nih.gov/10449422/ | ssRNA | B4 | Phenylalanine tRNA, Yeast | GGGAAUUCCGCGUGUGCUCGGUCACGCAUCUUCACGUCGAAAGCUACAUCGGUCUGCUGACGGUGAUGGCAUUUGCGCGGCUUACGCCGGUCGUGGUCCGUUCGGGAUCCUC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | binding efficiency: recovery as percentage of load: 40%, nan |
https://pubmed.ncbi.nlm.nih.gov/10449422/ | ssRNA | B6 | Phenylalanine tRNA, Yeast | GGGAAUUCCGCGUGUGCAGAGUGGCCGGGCCUCCAUUCGGGGGUUAUCUUCACCUACGGGCCCCACGCGUUAUUUAGUGUUGUACCGUAGGGCUGUGUCCGUUCGGGAUCCUC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | binding efficiency: recovery as percentage of load: 37%, nan |
https://pubmed.ncbi.nlm.nih.gov/10449422/ | ssRNA | B7 | Phenylalanine tRNA, Yeast | GGGAAUUCCGCGUGUGCGGGUCUUCACAGACUUGGCAAUUACCAGAACAUGUGCCUGGUAUACGUCAAUACGUCUGGUGGUUAAUACCGCCGUGGUCCGUUCGGGAUCCUC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | binding efficiency: recovery as percentage of load: 41%, nan |
https://pubmed.ncbi.nlm.nih.gov/10449422/ | ssRNA | B1 | Phenylalanine tRNA, Yeast | GGGAAUUCCGCGUGUGCAUCACGGGUGUAUGCAAGACUCAGCAGUGGGCCAUAUGGUCGGAUCGAGGCUAGCUAAGUCUCCCAAUUGCACCUUCGUGGUCCGUUCGGGAUCCUC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | binding efficiency: recovery as percentage of load: 16%, nan |
https://pubmed.ncbi.nlm.nih.gov/10097084/ | ssRNA | D20 | Cytoplasmic domain of CD18 | GGGCGCUAAGUCCUCGCUCAUGCGCGUCCCAUGGGGUAUAGAGGGGUCGAAGUGGACGCGCGACUCGGAUCCUAC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: between 500 and 1,000 nM, 500 |
https://pubmed.ncbi.nlm.nih.gov/10097084/ | ssRNA | D28 | Cytoplasmic domain of CD18 | GGGCGCUAAGUCCUCGCUCAUACAACGAGGGGUCGUGUAGGGAUGUAUGGGCUUGGACACACGCGCGACUCGGAUCCUAC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: between 500 and 1,000 nM, 500 |
https://pubmed.ncbi.nlm.nih.gov/10097084/ | ssRNA | D31 | Cytoplasmic domain of CD18 | GGGCGCUAAGUCCUCGCUCACAAGGUGCAAUGCAAUAUGUGAGUGCGCCGCCCUUUCUCUCGCGCGACUCGGAUCCUAC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: between 500 and 1,000 nM, 500 |
https://pubmed.ncbi.nlm.nih.gov/10348914/ | ssRNA | RNA-1 | Subtilisin BPN | GGGCGAAUUCGAGCUCGGGCCACUCGCUCAACACGGUAAGUAGAGACCUAGUGGUACAUAAAGGACUGCAGGCAUGCAAGCU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Ki: 2.5 µM, nan |
https://pubmed.ncbi.nlm.nih.gov/10101203/ | ssRNA | 85 | Unr (Upstream of N-Ras) protein, Human | GGGCCACCAACGACAUUGAAUGAGAGAGAAGUAAAAGGUUGAUAUAAAUAGUGCCCA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 11 nM, 11 |
https://pubmed.ncbi.nlm.nih.gov/10101203/ | ssRNA | 88 | Unr (Upstream of N-Ras) protein, Human | GGGCCACCAACGACAUUUCGAAAGAAAAGAGUAACUGGUUGAUAUAAAUAGUGCCCA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 10 nM, 10 |
https://pubmed.ncbi.nlm.nih.gov/10101203/ | ssRNA | 76 | Unr (Upstream of N-Ras) protein, Human | GGGCCACCAACGACAUUAAGAGAAGAAGUACCCGAGCGUUGAUAUAAAUAGUGCCCA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 10 nM, 10 |
https://pubmed.ncbi.nlm.nih.gov/10101203/ | ssRNA | 98 | Unr (Upstream of N-Ras) protein, Human | GGGCCACCAACGACAUUGAUGAAGUAAAAAGCGAUGAGUUGAUAUAAAUAGUGCCCA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 21 nM, 21 |
https://pubmed.ncbi.nlm.nih.gov/10101203/ | ssRNA | 58 | Unr (Upstream of N-Ras) protein, Human | GGGCCACCAACGACAUUGGGAGGCAGAAAGGAAAAAGUGUUGAUAUAAAUAGUGCCCA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 13 nM, 13 |
https://pubmed.ncbi.nlm.nih.gov/10101203/ | ssRNA | 77 | Unr (Upstream of N-Ras) protein, Human | GGGCCACCAACGACAUUAAGAAAGAACGGAACCAUGGUUGAUAUAAAUAGUGCCCA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 10 nM, 10 |
https://pubmed.ncbi.nlm.nih.gov/10101203/ | ssRNA | 78 | Unr (Upstream of N-Ras) protein, Human | GGGCCACCAACGACAUUGAAAAAAAAACAAGAAGAAGGUUGAUAUAAAUAGUGCCCA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 8 nM, 8 |
https://pubmed.ncbi.nlm.nih.gov/10408383/ | 2'-fluoro-RNA | C5C6 | C5 component of human complement (serum glycoprotein) | GGGAGGACGAUGCGGUCUCAUGCGUCGAGUGUGAGUUUACCUUCGUCAGACGACUCGCCCGA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/10408383/ | 2'-fluoro-RNA | truncated C5C6 | C5 component of human complement (serum glycoprotein) | CGAUGCGGUCUCAUGCGUCGAGUGUGAGUUUACCUUCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/10322029/ | ssDNA | QH' | Integration host factor (IHF) | GCCTGCTTTTTTATACTAAGTTGGCAATTATAAAAAAGCATTGCTTATCAATTTGTTGCAACGAACAGGTCACTA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | IC50: 11 nM, nan |
https://pubmed.ncbi.nlm.nih.gov/10322029/ | ssDNA | 1-5 | Integration host factor (IHF) | GCCTGCTTTTTTATACTAAGTTGGCATCTGCCGCTAAGTTGTTGATTCCAATTTGTTGCAACGAACAGGTCACTA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | IC50: 3.2 nM, nan |
https://pubmed.ncbi.nlm.nih.gov/10322029/ | ssDNA | 1-46 | Integration host factor (IHF) | GCCTGCTTTTTTATACTAAGTTGGCAACCGTCGCATATGTAAGGAATTCAATTTGTTGCAACGAACAGGTCACTA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | IC50: 3.9 nM, nan |
https://pubmed.ncbi.nlm.nih.gov/10322029/ | ssDNA | 1-50 | Integration host factor (IHF) | GCCTGCTTTTTTATACTAAGTTGGCAATGAATCTTGGATAGTCGGCAGCAATTTGTTGCAACGAACAGGTCACTA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | IC50: 10 nM, nan |
https://pubmed.ncbi.nlm.nih.gov/10322029/ | ssDNA | 1-52 | Integration host factor (IHF) | GCCTGCTTTTTTATACTAAGTTGGCAAGGATTCGTCTTGTCCCGAAATCAATTTGTTGCAACGAACAGGTCACTA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | IC50: 42 nM, nan |
https://pubmed.ncbi.nlm.nih.gov/10198434/ | ssRNA | 2-16 | Trypanosome variant surface glycoprotein (VSG) | GAAUUCAGUCGGACAGCGUCGGGUGGCCCGUGUCUGAGCGGGGACGGCCACUUGAGCGCGAUGGACGAAUAUCGUCUCCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 60 ± 17 nM, 60 |
https://pubmed.ncbi.nlm.nih.gov/10606271/ | ssRNA | R-06 | Trans-activation responsive (TAR) RNA element of HIV-1 | GGUUACCAGCCUUCACUGCGGGCCACGAUUGUCGAGUCCAUCAACAGGUCCCAGACGUGUUGAACUGGAGAUCCCCCCGCACCACGGUCGGUCACAC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 30 nM, 30 |
https://pubmed.ncbi.nlm.nih.gov/10606271/ | ssRNA | R-39 | Trans-activation responsive (TAR) RNA element of HIV-1 | GGUUACCAGCCUUCACUGCACAGCCUCACUCCGGUCCCAGACGAAGUGACGGCACCAUGUGAGAAGCCCUACUGUGCCCGCACCACGGUCGGUCACAC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/10606271/ | ssRNA | R-42 | Trans-activation responsive (TAR) RNA element of HIV-1 | GGUUACCAGCCUUCACUGCCCAGCGCAAUGACGACCCCCAGUCCCAGAUGGGAGGUCAUAGUCAUAGUCGGACUCACCGCGGCACCACGGUCGGUCACAC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/10606271/ | ssRNA | R-06 24 | Trans-activation responsive (TAR) RNA element of HIV-1 | UCAACACGGUCCCAGACGUGUUGA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 32 ± 8 nM , 32 |
https://pubmed.ncbi.nlm.nih.gov/10212256/ | ssDNA | IV-04 | Human immunodeficiency virus type-1 trans-activation-responsive (TAR) RNA element | GCAGTCTCGTCGACACCCAGCAGCGCATGTAACTCCCATATCATGTGTGTGCTGGATCCGACGCAG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 20 nM, 20 |
https://pubmed.ncbi.nlm.nih.gov/10212256/ | ssDNA | III-25 39 | Human immunodeficiency virus type-1 trans-activation-responsive (TAR) RNA element | CCCACGGGAGAATACTCCCATCATTGAATCCCGTGCTGG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 50 nM, 50 |
https://pubmed.ncbi.nlm.nih.gov/10212256/ | ssDNA | III-33 39 | Human immunodeficiency virus type-1 trans-activation-responsive (TAR) RNA element | CCACAGTACGTTAACTCCCATATACACGTATGGTGCTGG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 50 nM, 50 |
https://pubmed.ncbi.nlm.nih.gov/10212256/ | ssDNA | IV-04 39 | Human immunodeficiency virus type-1 trans-activation-responsive (TAR) RNA element | CCAGCAGCGCATGTAACTCCCATATCATGTGTGTGCTGG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 50 nM, 50 |
https://pubmed.ncbi.nlm.nih.gov/10212256/ | ssDNA | IV-40 38 | Human immunodeficiency virus type-1 trans-activation-responsive (TAR) RNA element | CCAGTAGGACATTACTCCCACACTGATGTCCGTGCTGG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 120 nM, 120 |
https://pubmed.ncbi.nlm.nih.gov/10074372/ | ssRNA | RNA aptamer 3 | Human transcription factor NF-kB as a p50 homodimer (p502) | GGGAUAUCCUCGAGACAUAAGAAACAAGAUAGAUCCUGAAACUGUUUUAAGGUUGGCCGAUCUUCUGCUCGAGAAUGCAUGAAGCGUUCCAUAUUUUU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 1.34 ± 0.2 nM , 1,34 |
https://pubmed.ncbi.nlm.nih.gov/10233958/ | ssDNA | 8-5 aptamer | Rex fusion protein of Human T-lymphotropic virus 1 (HTLV-1) | GGGAACTCGATGAAGCGAATTCTGTAGGCGACGGTACGCAAGTACTCTTGCGCCACAGGCCTATCTATCGGATCCACG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kapp: 25 nM & 30 nM, nan |
https://pubmed.ncbi.nlm.nih.gov/10908352/ | ssRNA | 109.2-3 | Prokaryotic 16s-rRNA region | GGGAGAAUUCCGACCAGAAGCCUUCUCCUGCCGCGCGAUUUUACGCCGACAAGGGUGGCAUGAUGAUGUGUCUNUAUAUAGCAUAUGUGCGUCUACAUGGAUCCUCA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 1.236 ± 0.051 uM, 1,236 |
https://pubmed.ncbi.nlm.nih.gov/10908352/ | ssRNA | 109.1-7 | Prokaryotic 16s-rRNA region | GGGAGAAUUCCGACCAGAAGCUUUUAGGGCGGGACUUUUGGCCGCAAAGGUUGGUGUGAGGGUUCUCAAUAAUGGCCCAAGCAUAUGUGCGUCUACAUGGAUCCUCA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 1.446 ± 0.088 uM, 1,446 |
https://pubmed.ncbi.nlm.nih.gov/10908352/ | ssRNA | 109.2-15 | Prokaryotic 16s-rRNA region | GGGAGAAUUCCGACCAGAAGCGGCGUUCCGCAUCGGCAACUGGCGAGGAGUUGUAUUCGGCGGAAACGGGUUGAGGUCCGACAUAUGUGCGUCUACAUGGAUCCUCA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 1.665 ± 0.101 uM, 1,665 |
https://pubmed.ncbi.nlm.nih.gov/10908352/ | ssRNA | 69.1-4 | Prokaryotic 16s-rRNA region | GGGAGAAUUCCGACCAGAAGCAGUGGAAGAGCCGGGUUGGGCAUAUGUGCGUCUACAUGGAUCCUCA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 2.946 ± 0.149 uM, 2,946 |
https://pubmed.ncbi.nlm.nih.gov/10908352/ | ssRNA | 69.1-11 | Prokaryotic 16s-rRNA region | GGGAGAAUUCCGACCAGAAGCAGCGGAACGGCCGACUUCAACAUAUGUGCGUCUACAUGGAUCCUCA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 2.786 ± 0.188 uM, 2,786 |
https://pubmed.ncbi.nlm.nih.gov/29711918/ | ssRNA | 1D13-01 | Doxycyline | GGAGCUCGGUAGUGACGCGUUGUGUUUACGCGUCUGAUGAGUGUAUAUGACACCGAUGGGUAUUUGCUAGUAUCCUGCGUUCACGAAACUACCUCGAGACGU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Ki: 70 ± 20 nM, nan |
https://pubmed.ncbi.nlm.nih.gov/29711918/ | ssRNA | 1D16-05 | Doxycyline | GGAGCUCGGUAGUGACGCGUUGUGUUUACGCGUCUGAUGAGUGGUACAGUCCAGGGUGAAGUUCCAAUUUUGAACACCUCCACGAAACUACCUCGAGACGU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Ki: 20 ± 5 nM, nan |
https://pubmed.ncbi.nlm.nih.gov/29711918/ | ssRNA | 1D16-06 | Doxycyline | GGAGCUCGGUAGUGACGCGUUGUGUUUACGCGUCUGAUGAGUGGUUUGACCCUUGAUUCGAUGUAUUCGAAAGUGCUUGUUGACGAAACUACCUCGAGACGU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Ki: 25 ± 3 nM, nan |
https://pubmed.ncbi.nlm.nih.gov/11101810/ | ssRNA | rafl7 | Adenosine triphosphate (ATP) | GGAAGGCACGACGAAGCAAGCAGGCAACGAACACAGAAGACCGGGGGAACUACCGCGCGUGCCAGACCCAACCAGCCAGAGACC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 223 μM ± 20 μM, 223000 |
https://pubmed.ncbi.nlm.nih.gov/11101810/ | ssRNA | rafl7-U61C | Adenosine triphosphate (ATP) | GGAAGGCACGACGAAGCAAGCAGGCAACGAACACAGAAGACCGGGGGAACUACCGCGCGCGCCAGACCCAACCAGCCAGAGACC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 165 μM ± 10 μM, 165000 |
https://pubmed.ncbi.nlm.nih.gov/11101810/ | ssRNA | rafl7s | Adenosine triphosphate (ATP) | GGGCGCGACGAAGCAAGCAGGCAACGAACACAGAAGACCGGGGGAACUACCGCGCGCGCCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 175 μM ± 5 μM, 175 |
https://pubmed.ncbi.nlm.nih.gov/11101810/ | ssRNA | rafl28 | Adenosine triphosphate (ATP) | GGAAGGCACGACCGCGCAAGAUACCGCCCGACAGCGGAAGGAGGGGCAUGCGGUCCAGGGCUGAGACCCAACCAGCCAGAGACC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/29711918/ | ssRNA | 1D16-13 | Doxycyline | GGAGCUCGGUAGUGACGCGUUGUGUUUACGCGUCUGAUGAGUCCUCGGUAAUCGCCGUAUCAAAAGUCGGAAUGGAGGGUCGACGAAACUACCUCGAGACGU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Ki: 50 ± 30 nM, nan |
https://pubmed.ncbi.nlm.nih.gov/10671532/ | ssRNA | 9-41U22 | Pepocin | GGGAGUCUGAAGUCGGACUCGAUAUCAAUUCACUUCAGACU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 17.9 ± 2.2 nM, 17,9 |
https://pubmed.ncbi.nlm.nih.gov/10671532/ | ssRNA | 08-09 | Pepocin | GGGAAUGGAUCCACAUCUACGUAUUCAACCAAGUCUAAUGUCGGACUCGAUAUCAAUUCACUGCAGACUUGACGAAGCUU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 21.0 ± 2.0 nM, 21 |
https://pubmed.ncbi.nlm.nih.gov/10671532/ | ssRNA | 8-14 | Pepocin | GGGAAUGGAUCCACAUCUACGUAUUCAGUCUAGGAAGCAGUCGGACUUGUUAUCAAUUCACUGCAGACUGUACGAAGCUU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 23.4 ± 2.3 nM, 23,4 |
https://pubmed.ncbi.nlm.nih.gov/11128644/ | ssDNA | 8 | Hematoporphyrin IX (HPIX) | TAGGGAATTCGTCGACGGATCCTATGAACCAAGGGAGGGGCAGGGCGGGTAGGGTTAATAACGGATTCCGAGCGCCCAGCTCCTGCAGGTCGACGCATGCGCCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 1.1x10^-5 M, 11000 |
https://pubmed.ncbi.nlm.nih.gov/11128644/ | ssDNA | 13 | Hematoporphyrin IX (HPIX) | TAGGGAATTCGTCGACGGATCCACGAAGAAACAGGGCGCTTCGAACGAACATGGGCAGGGTGGGAAGTTTTAAAGTGGTACCTGCAGGTCGACGCATGCGCCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 9.1x10^-6 M, 9100 |
https://pubmed.ncbi.nlm.nih.gov/11128644/ | ssDNA | 14 | Hematoporphyrin IX (HPIX) | TAGGGAATTCGTCGACGGATCCCAGCGTAAGGTCGTGGGTGGTTGGGTGCCTAAGCGTATACTTACAGCGATTGATTTGGTCCTGCAGGTCGACGCATGCGCCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 1.2x10^-4 M, 120000 |
https://pubmed.ncbi.nlm.nih.gov/11128644/ | ssDNA | 20 | Hematoporphyrin IX (HPIX) | TAGGGAATTCGTCGACGGATCCGGTGCGGGTAGGGATGAGGGCGGGTCGGGTTGAGTGTGAGCTTAGGGGTGGCGGATCTACCTGCAGGTCGACGCATGCGCCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 6.3x10^-6 M, 6300 |
https://pubmed.ncbi.nlm.nih.gov/11128644/ | ssDNA | 22 | Hematoporphyrin IX (HPIX) | TAGGGAATTCGTCGACGGATCCCTAGAGTAACCTGTTGGGAGGGCGGGTAGGGCCCATTGAGAGGAGGACGTATTCGTCCGCCTGCAGGTCGACGCATGCGCCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 1.3x10^-5 M, 13000 |
https://pubmed.ncbi.nlm.nih.gov/11128644/ | ssDNA | 30 | Hematoporphyrin IX (HPIX) | TAGGGAATTCGTCGACGGATCCGCGGCAAATCAGCATACGAGTGTACAGGGACGGGACGGGTGGGTAAAAGGTGTCGCCTCAGCTGCAGGTCGACGCATGCGCCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 2.7x10^-6 M, 2700 |
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