reference stringlengths 7 774 ⌀ | aptamer_chemistry stringclasses 21
values | aptamer_name stringlengths 1 164 | target_name stringlengths 2 1.2k ⌀ | aptamer_sequence stringlengths 2 380 | origin stringclasses 6
values | target_chemistry stringclasses 11
values | external_id stringclasses 509
values | target_sequence stringclasses 357
values | new_affinity stringlengths 3 193 ⌀ |
|---|---|---|---|---|---|---|---|---|---|
https://pubmed.ncbi.nlm.nih.gov/11128644/ | ssDNA | 32 | Hematoporphyrin IX (HPIX) | TAGGGAATTCGTCGACGGATCCCCAACTTGGGCGGAGGGCTAACGGTGGGGGGATATTATGAGGGGTGGAGGTATTAACCATTCTGCAGGTCGACGCATGCGCCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 9.8x10^-6 M, 9800 |
https://pubmed.ncbi.nlm.nih.gov/11128644/ | ssDNA | 33 | Hematoporphyrin IX (HPIX) | TAGGGAATTCGTCGACGGATCCCCGGGGATTAGAATAGTGGAGGGCCGGTGGCAAATGGGTAAGTAGGTTGAAGGGCTAAATTCTGCAGGTCGACGCATGCGCCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 2.2x10^-4 M, 220000 |
https://pubmed.ncbi.nlm.nih.gov/11128644/ | ssDNA | 26-5' | Hematoporphyrin IX (HPIX) | ATGGGGTCGGGCGGGCCGGGTGTC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 1.5x10^-5 M, 150000 |
https://pubmed.ncbi.nlm.nih.gov/11128644/ | ssDNA | 26-3' | Hematoporphyrin IX (HPIX) | ATGGTGGACGGAGATGGGACGTAG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/10913311/ | ssRNA | cAMP - b (parent) | Second messenger adenosine 3',5'-cyclic monophosphate (cAMP; 1) | GGAAGAGAUGGCGACUAAAACGACUUGUCGCGUGCUGCCCGCCUGUUCGCUUCUGCACCCCGGCGGUAAGCUUGGCAC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | No reported, nan |
https://pubmed.ncbi.nlm.nih.gov/10913311/ | ssRNA | cAMP - b | Second messenger adenosine 3',5'-cyclic monophosphate (cAMP; 1) | GGAAGAGAUGGCGACUAAAACGACUUGUCGC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 10 uM, 10000 |
https://pubmed.ncbi.nlm.nih.gov/12903331/ | ssRNA | B-2 | R5 helix peptide | GGGAAACUGGAUGGAAUGGGCUCGAUGAAAAUCGACCGUGCGCUGAAAAGCACGCGAGGUCCUGCUGUAAGUGUGCCA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 10 nM, 10 |
https://pubmed.ncbi.nlm.nih.gov/12903331/ | ssRNA | B-6 | R5 helix peptide | GGGAAACUGGAUGGAAUGGGCUCGCAAGGCCCCCUGAGCUGCACAAGUUCAUGGCGAGGUCCUGCUGUAAGUGUGCCA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 10 nM, 10 |
https://pubmed.ncbi.nlm.nih.gov/10989176/ | ssDNA | 06.50 aptamer | Basic fibroblast growth factor (bFGF(155)), Human | GGGAGGACGATGCGGTGACGTAAGAGTGTAATCGATGCAGCCTGGCAGACGACGAGCGGGA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 560 pM, 0,56 |
https://pubmed.ncbi.nlm.nih.gov/10989176/ | ssDNA | 06.15 aptamer | Basic fibroblast growth factor (bFGF(155)), Human | GGGAGGACGATGCGGGCGAAGGCACACCGAGTTCATAGTATCCCACAGACGACGAGCGGGA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 16 pM, 0,016 |
https://pubmed.ncbi.nlm.nih.gov/10743940/ | ssDNA | Chi No 1 | Poly-beta-1,4-N-acetylglucosamine (Chitin) (poly-β-1,6-N-acetyl-D-glucosamine) | TAGGGAATTCGTCGACGGATCCCCCAGCAGCACTGGTAGTGAGGCAGTTCACCGGTGGGGCGGTGAGTTTGGCTGCTATTTATCTCCAGGTCGACGCATGCGCCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Binding Efficiency : <1%, nan |
https://pubmed.ncbi.nlm.nih.gov/10743940/ | ssDNA | Chi No 23 | Poly-beta-1,4-N-acetylglucosamine (Chitin) (poly-β-1,6-N-acetyl-D-glucosamine) | TAGGGAATTCGTCGACGGATCCTGCGCATGTGAAAGGTTGCCTAACTGGACAGGGTTTAGGAGCGACTAGACACAGCTCCAGGTCGACGCATGCGCCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Binding Efficiency : 18%, nan |
https://pubmed.ncbi.nlm.nih.gov/10743940/ | ssDNA | Chi No 28 | Poly-beta-1,4-N-acetylglucosamine (Chitin) (poly-β-1,6-N-acetyl-D-glucosamine) | TAGGGAATTCGTCGACGGATCCGGCAAGATGTGCCCAGAACAGTTGCTTGTATGGTGGGGAGCGTCCATATTGGCTTAAACCTCCAGGTCGACGCATGCGCCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Binding Efficiency : 6%, nan |
https://pubmed.ncbi.nlm.nih.gov/10743940/ | ssDNA | Chi No 46 | Poly-beta-1,4-N-acetylglucosamine (Chitin) (poly-β-1,6-N-acetyl-D-glucosamine) | TAGGGAATTCGTCGACGGATCCCCGTAACCCTGCGGGGGGGGGAGAAGGCAATGGGGGACAACTCGCCGGTAGCCATCCATATCTCCAGGTCGACGCATGCGCCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Binding Efficiency : 52%, nan |
https://pubmed.ncbi.nlm.nih.gov/10743940/ | ssDNA | Chi No 52 | Poly-beta-1,4-N-acetylglucosamine (Chitin) (poly-β-1,6-N-acetyl-D-glucosamine) | TAGGGAATTCGTCGACGGATCCCCTAAGGGGGGACTCAGCATTTTGTGCGGGCGGCGCTAACACAATCAGATAGAGCGGGGTTCTCCAGGTCGACGCATGCGCCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Binding Efficiency : 73%, nan |
https://pubmed.ncbi.nlm.nih.gov/10786843/ | ssRNA | Tyr 1 | L-tyrosine | GGGAAGCUUGUACAGGGGGCAGUCAACUCGUGCGAUCGUGAAAACGGGGCAAGAUGGCCUUACAGCGGUCAAUACGGGGGUCAUCAGAUAGGGAGGCCCUCCUGGUGGUCCGUUCGGGAUCCUC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 35 uM, 35000 |
https://pubmed.ncbi.nlm.nih.gov/10848986/ | ssRNA | G9-I | Nonstructural protein 3 (NS3) protease active site in the truncated polypeptide ΔNS3, Hepatitis C virus (HCV) | GGGAGAAUUCCGACCAGAAGCUUCGGGAUUUGAGGGUAGAAUGGGACUACCUUUCCUCUCUCCUUCCUCUUCU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 11.6 nM, 11,6 |
https://pubmed.ncbi.nlm.nih.gov/10848986/ | ssRNA | G9-II | Nonstructural protein 3 (NS3) protease active site in the truncated polypeptide ΔNS3, Hepatitis C virus (HCV) | GGGAGAAUUCCGACCAGAAGUGCUCUUAGAAUGGGACUAAGACACGGGACCCUUUCCUCUCUCCUUCCUCUUCU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 6.3 nM, 6,3 |
https://pubmed.ncbi.nlm.nih.gov/10848986/ | ssRNA | G9-III | Nonstructural protein 3 (NS3) protease active site in the truncated polypeptide ΔNS3, Hepatitis C virus (HCV) | GGGAGAAUUCCGACCAGAAGUACGACACGAUUGGGACGUGUCUAUGGGACCCUUUCCUCUCUCCUUCCUCUUCU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 8.9 nM, 8,9 |
https://pubmed.ncbi.nlm.nih.gov/11132628/ | ssRNA | clone 31 | Tat protein from HIV-1 in the presence of Zn2+ ion | GGGAGAAUUCCGACCAGAAGCUUUGGUUAUCAUGUUUAUGCGUACGGGCGCCCAUAUGUGCGUCUACAUGGAUCCUCA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 0.31 uM, 0,31 |
https://pubmed.ncbi.nlm.nih.gov/10882721/ | 2'-fluoro/O-Me-RNA | ADR58 | Oncostatin M (OSM), Human | GGGAGGACGAUGCGGAUCGCCCUGAACCGGCCCAGCAGACUGCUGACGGCACGAUCAGACGACUCGCCCGA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 7 nM, 7 |
https://pubmed.ncbi.nlm.nih.gov/10882721/ | 2'-fluoro/O-Me-RNA | truncated ADR58 | Oncostatin M (OSM), Human | GAACCGGCCCAGCAGACUGCUGACGGCACGAUCU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 7 nM, 7 |
https://pubmed.ncbi.nlm.nih.gov/11457319/ | ssDNA | F7-9D | Cocaine | GACAAGGAAAATCCTTCAATGAAGTGGGTC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd ∼ 100 µM, 100000 |
https://pubmed.ncbi.nlm.nih.gov/11668446/ | 2'-amino-RNA | Clone 3 | N-methyl mesoporphyrin IX (NMM) | UAGGGAAUUCGUCGACGGAUCCUGAACGGAGGGCGGAUGUAGAACAGGGGCUGGAAUGAUUCGGGAUUUUCUGCUGCAGGUCGACGCAUGCGCCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 0.25 μM, 250 |
https://pubmed.ncbi.nlm.nih.gov/11668446/ | 2'-amino-RNA | Clone 30 | N-methyl mesoporphyrin IX (NMM) | UAGGGAAUUCGUCGACGGAUCCAGUUCACUCGACCAAGGCGUCCCAAGCGGAGGAUCGCAAGGAGGUGUAGACGUCUGCAGGUCGACGCAUGCGCCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 0.66 μM, 660 |
https://pubmed.ncbi.nlm.nih.gov/11329270/ | ssRNA | RNA20 | WT1-ZFP & WT1[+KTS]-ZFP (two zinc finger isoforms of the WT1 DNA binding domain) | GGGGCCACCAACGACAUUGACGAAUGCGUAAAUUGCUAGGUUGAUAUAAAUAGUGCCCAUGGAUCCGCGGGUGUCGGG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 87.4\u2009±\u200910.4 nM (WT1-ZFP) & 69.8\u2009±\u20098.4 nM (WT1[+KTS]-ZFP), 87,4 |
https://pubmed.ncbi.nlm.nih.gov/11329270/ | ssRNA | RNA22 | WT1-ZFP & WT1[+KTS]-ZFP (two zinc finger isoforms of the WT1 DNA binding domain) | GGGGCCACCAACGACAUUGAUAUGGUGACCACCCCGGCGUUGAUAUAAAUAGUGCCCAUGGAUCCGCGGGUGUCGGG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 13.8\u2009±\u20091.1 nM (WT1-ZFP) & 22.8\u2009±\u20092.3 nM (WT1[+KTS]-ZFP), 13,8 |
https://pubmed.ncbi.nlm.nih.gov/11329270/ | ssRNA | RNA38 | WT1-ZFP & WT1[+KTS]-ZFP (two zinc finger isoforms of the WT1 DNA binding domain) | GGGGCCACCAACGACAUUAUCACCCACCCCGAGCUGGCGUUGAUAUAAAUAGUGCCCAUGGAUCCGCGGGUGUCGGG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 17.8\u2009±\u20091.4 nM (WT1-ZFP) & 33.7\u2009±\u20094.4 nM (WT1[+KTS]-ZFP) , 17,8 |
https://pubmed.ncbi.nlm.nih.gov/11478897/ | ssDNA | I-3 | Ff gene 5 protein (g5p) | CGGGATCCAACGTTTTGGGGTCAGGCTGGGGTTGTGCAGGTCAAGAGGCAGAATTCGC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kωapp at 10 mM NaCl: 3.0\u2009±\u20090.7 (10-5\u2009M-1)\nKωapp at 200 mM NaCl: >300 (10-5\u2009M-1), nan |
https://pubmed.ncbi.nlm.nih.gov/11478897/ | ssDNA | I-3c26 | Ff gene 5 protein (g5p) | GGGGTCAGGCTGGGGTTGTGCAGGTC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kωapp at 10 mM NaCl: 2.4\u2009±\u20090.2 (10-5\u2009M-1)\nKωapp at 200 mM NaCl: 2.1\u2009±\u20090.1 (10-5\u2009M-1), nan |
https://pubmed.ncbi.nlm.nih.gov/11557343/ | 2'-amino-RNA | C2 | Disaccharide analogue of moenomycin A | GGAGGUCGACCUCGCGCGAGGAGGGUGGAGGGUCGUAGAGCGCGUAGGAGG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 300 to 400 nM, 300 |
https://pubmed.ncbi.nlm.nih.gov/11557343/ | 2'-amino-RNA | A6 | Disaccharide analogue of moenomycin A | UCUAAUACGACUCACUAUAGGGAGAGACAAGCUUGGGUCUCAUCGGAGGAGCGGUGUGGUGAGGUGACGCGGAAAAGGUAGAAGAGAAAGAGAAGUUAAUUAAGGAUCCUCAC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 300 to 400 nM, 300 |
https://pubmed.ncbi.nlm.nih.gov/11178986/ | ssRNA | Clone 5 | Sialyl Lewis X (sLeX)-expressing HL60 cells | CCGUAAUACGACUCACUAUAGGGGAGCUCGGUACCGAAUUCAAGGYACUCUGUGCUUGUCGAUGUGYAUUGAUGGCACUUUCGAGUCAACGAGUUGACAGRACAAGUAGUCAAGCUUUGCAGAGAGGAUCCUU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 0.085 nM and 3.3 nM via SPR, 0,085 |
https://pubmed.ncbi.nlm.nih.gov/11557342/ | ssRNA | cb28 aptamer | Class I typical tetracyclins | GCAUGCUAAUACGACUCACUAUAGGAGCUCAGCCUUCACUGCUGCUUAAAGCCUAAAACAUACCAGAUCGCCACCCGCGCUUUAAUCUGGAGAGGUGAAGAAUUCGACCACCUAGGCUGCACCACAAGCUU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: ~1 μM, 1000 |
https://pubmed.ncbi.nlm.nih.gov/11557342/ | ssRNA | cb28 minimer | Class I typical tetracyclins | GGCCUAAAACAUACCAGAUUUCGAUCUGGAGAGGUGAAGAAUUCGACCACCUAGGCCGGU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/11677128/ | ssDNA | Tuda-1 | Tubulin purified, Calf brain | TAGGGAATTCGTCGTCGTCGACGGATCCATGCTCGCGCCTGCTGTGTTGTTGCTTGGTTTGGTCTTTTTTTGGTTTGTTTTGGGTTCTGCAGGTCGACGCATGCGCCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 4.50×10−5 M, 45000 |
https://pubmed.ncbi.nlm.nih.gov/11677128/ | ssDNA | Tuda-2 | Tubulin purified, Calf brain | TAGGGAATTCGTCGTCGTCGACGGATCCGTTGGGCTACAGTACTTCCCCTTTTTTCTCTTCCTCCTTCCTATCGCTCTCCCTGCAGGTCGACGCATGCGCCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 1.94×10−5 M, 1,94 |
https://pubmed.ncbi.nlm.nih.gov/11279054/ | ssDNA | III.1 | Endothelial regulatory protein pigpen (YPEN-1) | ATACCAGCTTATTCAATTAGGCGGTGCATTGTGGTTGGTAGTATACATGAGGTTTGGTTGAGACTAGTCGCAAGATATAGATAGTAAGTGCAATCT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/11591377/ | 2'-fluoro-RNA | ADR7 | Monocyte chemoattractant protein‐1 (MCP‐1) | GGGAGGACGAUGCGGGAACUCACCGGGAAGAAGCCCGUUCCGUCACAGACAUGUUCCGCAUCGUCCUCCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 180 pM, 0,18 |
https://pubmed.ncbi.nlm.nih.gov/11591377/ | 2'-fluoro-RNA | ADR22 | Monocyte chemoattractant protein‐1 (MCP‐1) | GGGAGGACGAUGCGGAAAAAUCUAGGCGCUGAAGCCCCGCUUCCUUACCUUCACCCGCAUCGUCCUCCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 370 pM, 0,37 |
https://pubmed.ncbi.nlm.nih.gov/11513587/ | ssDNA | ODNs 93 | Human immunodeficiency virus type 1 reverse transcriptase (HIV-1 RT) | CCCCTCGAGGTGATTTTGCTCAAGTGGGGGTGGGAGGAGGGTAGGCCTTAGGTTTCTGAAGTATCGCTAATCAGGCGGATA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/11513587/ | ssDNA | ODNs 112 | Human immunodeficiency virus type 1 reverse transcriptase (HIV-1 RT) | CCCCTCGAGGTGATTTTGCTCAAGTCCAGTGGCGGGTGGGTGGGTGGTGGGGGGACTTGGAGTATCGCTAATCAGGCGGATA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/11590140/ | 2'-fluoro/O-Me-RNA | TTA1 | Tenascin-C (TN-C) (Fibrinogen-like domain of TN-C) | GGGAGGGACGCGUCGCCGUAAUGGAUGUUUUGCUCCCUG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 5 × 10−9 M., 5 |
https://pubmed.ncbi.nlm.nih.gov/11139634/ | ssRNA | D8 | Sephadex G-100 | GGGAGUCGACCGACCAGAAGUCCGAGUAAUUUACGUUUUGAUACGGUUGCGGAACUUGCUAUGUGCGUCUACAUCUAGACUCAU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/11735341/ | ssRNA | Toggle-25 | Thrombin, Human and porcine | GGGAGAGAGGAAGAGGGAUGGGGAACAAAGCUGAAGUACUUACCCAAGAUCAUCCCGAACGACAUAACCCAGAGGUCGAU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: (Human: 2.8 ± 0.7 nM, Porcine: 83 ± 3 pM), 2,8 |
https://pubmed.ncbi.nlm.nih.gov/11705996/ | ssRNA | 12 E4 | N6-adenine | GCGAAUUCGGAGAGGAUACUACACGUGAUAGGACGAUUAUCGAAAAUCACCAGAUUGGACCCUGGUUAACGAUCGGAAGCUUCUGCUACAUGCAAUGG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 10 μM, 10000 |
https://pubmed.ncbi.nlm.nih.gov/11557341/ | ssDNA | pe38 | L-Tyrosinamide | AATTCGCTAGCCGAGCAGACGGCGTACGGAATTCGAGCTCGGTACCCGGGGATCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 760±21 μM, 760000 |
https://pubmed.ncbi.nlm.nih.gov/11907208/ | ssRNA | aptamer A.2 | Nonstructural 5B (NS5B) polymerase, hepatitis C virus (HCV) NS5BΔC55 protein | GGGAUGCUUCGGCAUCCCAGUCGAUGCGUAUCGCAGACUAUGUGGCUUCGGCCGUUGGAGUUGGUACCGCUUCGGCGGUACGUAAGCUUGGG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 16 ± 1.6 nM, 16 |
https://pubmed.ncbi.nlm.nih.gov/11907208/ | ssRNA | aptamer B.2 | Nonstructural 5B (NS5B) polymerase, hepatitis C virus (HCV) NS5BΔC55 protein | GGGAUGCUUCGGCAUCCCCGAAGCCGCUAUGGACCAGUGGCGCGGCUUCGGCCCGACGGAGUGGUACCGCUUCGGCGGUACGUAAGCUUGGG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 1.5 ± 0.2 nM, 1,5 |
https://pubmed.ncbi.nlm.nih.gov/11907208/ | ssRNA | aptamer B.3 | Nonstructural 5B (NS5B) polymerase, hepatitis C virus (HCV) NS5BΔC55 protein | GGGAUGCUUCGGCAUCCCGCUCUGGGCCGAAUAUGGACCACGUGGCUUCGGCCGCCAGCUCGUGUACCGCUUCGGCGGUACGUAAGCUUGGG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 10 ± 1.6 nM, 10 |
https://pubmed.ncbi.nlm.nih.gov/11907208/ | ssRNA | aptamer B.2 SLII | Nonstructural 5B (NS5B) polymerase, hepatitis C virus (HCV) NS5BΔC55 protein | CGAAGCCGCGCUAUGGACCAGUGGCGCGGCUUCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: >>200 nM, 200 |
https://pubmed.ncbi.nlm.nih.gov/12000850/ | ssRNA | SA19 Aptamer | Streptavidin (SA) | AAUUAACCCUCACUAAAGGGAACUGUUGUGAGUCUCAUGUCGAACUUUCCUAGCGCACAUGCGACCUCUAUGCGUAAUACGAACGUUGACGGUUUGAGCGUCUAGUCUUGUCU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 7 ± 1.8 nM, 7 |
https://pubmed.ncbi.nlm.nih.gov/11756401/ | ssRNA | DP3 | Neuropeptide Y (NPY) | UCGGAGAAAGGGAAGCUUGAGCAGCAGGAGGGCCGGCGUUAGGGUUAGCGAGCCGAUUGAAAGAAGAAGGAACGAGCGUACGGAUCCGAUC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 0.37 μM, 370 |
https://pubmed.ncbi.nlm.nih.gov/12490703/ | ssRNA | W2 | Complement 5 protein (C5 protein) | CGUCCCUUCGCAACCCUUUAAGACUUGGGACCCUGCUCUU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 3.6 nM, 3,6 |
https://pubmed.ncbi.nlm.nih.gov/11904188/ | ssRNA | RNA5 | Release factor 1 (RF1), Thermus thermophilus (T. thermophilus) | GGGAGAGGAUACUACACGUGGUGUGUCAAGCCAGCCCUAGCUUGCUACCUGGGGGCCACUGACCUAUCCAUUGCAUGUAGCAGAAGCUUCCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 2 x 10^-5 M, 20000 |
https://pubmed.ncbi.nlm.nih.gov/11904188/ | ssRNA | RNA7 | Release factor 1 (RF1), Thermus thermophilus (T. thermophilus) | GGGAGAGGAUACUACACGUGGAAAGCUGAAAGUGAACGGAGUAUCACAGAGAACCCGGAAAAGUGGAGCCAUUGCAUGUAGCAGAAGCUUCCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 2 x 10^-5 M, 20000 |
https://pubmed.ncbi.nlm.nih.gov/12408978/ | ssRNA | SE RNA #1 | Nuclear factor of activated T cells NFATc DNA binding domain (DBD) | GGGAGAGCGGAAGCGUGCUGGGCCUCUGUUCCCAAGGGAAUACYGGUCGUGUUGGAUCAGGUUGGCAUAACCCAGAGGUCGAUGGAUCCCCCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 30 nM, 30 |
https://pubmed.ncbi.nlm.nih.gov/12124337/ | 2'-fluoro-RNA | xPSM-A9 | Prostate-specificmembrane antigen (PSMA) of prostate cancer cells | GGGAGGACGAUGCGGACCGAAAAAGACCUGACUUCUAUACUAAGUCUACGUUCCCAGACGACUCGCCCGA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Ki: 2.1 nM, nan |
https://pubmed.ncbi.nlm.nih.gov/12124337/ | 2'-fluoro-RNA | xPSM-A10 | Prostate-specificmembrane antigen (PSMA) of prostate cancer cells | GGGAGGACGAUGCGGAUCAGCCAUGUUUACGUCACUCCUUGUCAAUCCUCAUCGGCAGACGACUCGCCCGA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Ki: 11.9 nM, nan |
https://pubmed.ncbi.nlm.nih.gov/11884639/ | ssRNA | bU118 | C8-linked ATP agarose | GGGAAAAGCGAAUCAUACACAAGACUUAGGAGGAAGAAACUGCACAAUACACAGAUCACGCGAAAGGAUAAUGCGUUCUGCGGAUUGUGGGCCUGGGCAUAAGGUAUUUAAUUCCAUA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/11884639/ | ssRNA | bU320 | C8-linked ATP agarose | GGGAAAAGCGAAUCAUACACAAGAGCAAUCUUGUUAACGGUGGAGGACGUAUGAAGGAAACUUAGGAAUCCCUGGUCCACGAAUCUGACCGUGUGGGCAUAAGGUAUUUAAUUCCAUA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/11884639/ | ssRNA | bU321 | C8-linked ATP agarose | GGGAAAAGCGAAUCAUACACAAGAAAGAACGUGAUGAAACGGUAACCAUAUCGCGUGCUCAAACUACAACGGAAAAUGAGGAGGAACGUGCUCAUGGGCAUAAGGUAUUUAAUUCCAUA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/12095300/ | ssRNA | E2F-E1 | E2F transcription factor | GUCGAUGUGAUAAGUAGGACGGAGGUGGUCGAU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd:2–4 nM, 2 |
https://pubmed.ncbi.nlm.nih.gov/11820803/ | ssRNA | beta 55 | Beta amyloid peptide (βA4(1–40)) | UUACCGUAAGGCCUGUCUUCGUUUGACAGCGGCUUGUUGACCCUCACACUUUGUACCUGCUGCCAA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 29–48 nM, 29 |
https://pubmed.ncbi.nlm.nih.gov/12185247/ | ssRNA | Aptamer 10-10 | Guanosine triphosphate (GTP) | GUGACGCGACUAGUUACGGAUGCUCAACAGUAGCCAACACGAGUACUGCUUCGGCAGUGGAACCAACGUAGUAUGUUUAGCAUUCAUUCAGUUGGCGCCUCCUAUAGUGAGUCGUAUUACAU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 28 nM, 28 |
https://pubmed.ncbi.nlm.nih.gov/12185247/ | ssRNA | Class I | Guanosine triphosphate (GTP) | GUGACGCGACUAGUUACGGACUUUCCGaAGuGGUUGGGCUGCUUCGGCAGuGuGAAAaCGGAGAGUUCAUUCAGUUGGCGCCUCCUAUAGUGAGUCGUAUUACAU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 60–300 nM, 60 |
https://pubmed.ncbi.nlm.nih.gov/12185247/ | ssRNA | Aptamer 10-59 | Guanosine triphosphate (GTP) | GUGACGCGACUAGUUACGGAGAUAAGUUCCCAAGGCGGGUUGGAAGAGAUAUCAUAGGAGCUUGUCUUCAUUCAGUUGGCGCCUCCUAUAGUGAGUCGUAUUACAU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 200 nM, 200 |
https://pubmed.ncbi.nlm.nih.gov/12185247/ | ssRNA | Aptamer 9-12 | Guanosine triphosphate (GTP) | GUGACGCGACUAGUUACGGAUCUAGCAGUUCAGGUAACCACGUAAGAUACGGGUCUAGAUUCAUUCAGUUGGCGCCUCCUAUAGUGAGUCGUAUUACAU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 250 nM, 250 |
https://pubmed.ncbi.nlm.nih.gov/12185247/ | ssRNA | Aptamer 10-24 | Guanosine triphosphate (GTP) | GUGACGCGACUAGUUACGGAGGCAUCUAUAUACUGCUUCGGCAGGGAACUCUACUAAGCACCGAUGUCUUCAUUCAGUUGGCGCCUCCUAUAGUGAGUCGUAUUACAU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 250 nM, 250 |
https://pubmed.ncbi.nlm.nih.gov/12185247/ | ssRNA | Aptamer 10-6 | Guanosine triphosphate (GTP) | GUGACGCGACUAGUUACGGAAAUGAAGAUAGUCGGGACCACUUCCCUGAGUCUGCUUCGGCAGUAACUCCAAGGAGAAAGGUCGUCAUUUUCAUUCAGUUGGCGCCUCCUAUAGUGAGUCGUAUUACAU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 500 nM, 500 |
https://pubmed.ncbi.nlm.nih.gov/12024047/ | ssRNA | C1 | Mitochondria | GGAAUUCUAAUACGACUCACUAUAGGGACGCAGGGACUGUACCUUCUAGGCUGGGUCAUGUGACUGUAGCGG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 1 nM, 1 |
https://pubmed.ncbi.nlm.nih.gov/12024047/ | ssRNA | C16 | Mitochondria | GGAAUUCUAAUACGACUCACUAUAGGGACGCAGGGACUGUACGGUAAGUCCCCGGGCAUGUGACUGUAGCGG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 0.46 nM, 0,46 |
https://pubmed.ncbi.nlm.nih.gov/12024047/ | ssRNA | C20 | Mitochondria | GGAAUUCUAAUACGACUCACUAUAGGGACGCAGGGACUGUAUGGUUUUCUGGGGUUUAUGUGACUGUAGCGG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 1.19 nM, 1,19 |
https://pubmed.ncbi.nlm.nih.gov/12024047/ | ssRNA | C32 | Mitochondria | GGAAUUCUAAUACGACUCACUAUAGGGACGCAGGGACUGUACGGAUCAGAGUCUCCUAUGUGACUGUAGCGG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 0.1 nM, 0,1 |
https://pubmed.ncbi.nlm.nih.gov/11919187/ | 2'-fluoro-RNA | Aptamer F4 | Receptor fibronectin, Trypanosoma cruzi (T. cruzi) parasite | ACCGAGUCCAGAAGCUUGUAGUACUGACCCUUCCCGACGCACGGACCAGUGAUGCCAACCCACCCGCCUAGAUGGAGUUGAAUUCUCCCUAUAGUGAGUCGUAUUAC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 142 ± 94 nM, 142 |
https://pubmed.ncbi.nlm.nih.gov/11919187/ | 2'-fluoro-RNA | Aptamer T6 | Receptor fibronectin, Trypanosoma cruzi (T. cruzi) parasite | ACCGAGUCCAGAAGCUUGUAGUACUCAAUACUCAAGCAAGCCCAGCCCUACCAACCCCGGAGCCUAGAUGGAGUUGAAUUCUCCCUAUAGUGAGUCGUAUUAC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 400 ± 239 nM, 400 |
https://pubmed.ncbi.nlm.nih.gov/11919187/ | 2'-fluoro-RNA | Aptamer HS6 | Receptor fibronectin, Trypanosoma cruzi (T. cruzi) parasite | ACCGAGUCCAGAAGCUUGUAGUACUAUCGCUACUGCGCCGGUUGCGGCUUGCGGUUGCAACGCCAGCCUAGAUGGAGUUGAAUUCUCCCUAUAGUGAGUCGUAUUAC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 40 ± 14 nM, 40 |
https://pubmed.ncbi.nlm.nih.gov/11919187/ | 2'-fluoro-RNA | Aptamer L28 | Receptor fibronectin, Trypanosoma cruzi (T. cruzi) parasite | ACCGAGUCCAGAAGCUUGUAGUACUUCUCUCAGCCACGUUCUAUGUGACGCAAGCUACCCUGUAUGCCUAGAUGGAGUUGAAUUCUCCCUAUAGUGAGUCGUAUUAC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 209 ± 99 nM, 209 |
https://pubmed.ncbi.nlm.nih.gov/12054450/ | ssRNA | P19 | Rat neurotensin receptor NTS-1 | UAAUACGACUACUAUAGGGAGGACGAUGCGGACAGAUACGGAACUACAGAGGUCAAUUACGGUGGCCACGCCAGACGACUCGCCCGA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 0.37 nM, 0,37 |
https://pubmed.ncbi.nlm.nih.gov/12667800/ | ssRNA | R1-1 | Hepatitis C virus NS5B protein (HCV NS5B protein) | GGGAGCUCAGAAUAAACGCUCAACUCCUAACCUCUCCGCAUGNGCUGUUACCUACACAGCUCAGCAUGCAUGAGGCCCGGAUCCGGC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 100 ± 6 (1/s), nan |
https://pubmed.ncbi.nlm.nih.gov/12667800/ | ssRNA | R20-43 | Hepatitis C virus NS5B protein (HCV NS5B protein) | GGGAGCUCAGAAUAAACGCUCAAUGUAGAGACUUUUCGAAAAGCGUGUUCCCAAUGAGUCUAUGCAUGCAUGAGGCCCGGAUCCGGC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd × 10e4: 1.0 ± 0.1 (1/s), nan |
https://pubmed.ncbi.nlm.nih.gov/12667800/ | ssRNA | R20-15 | Hepatitis C virus NS5B protein (HCV NS5B protein) | GGGAGCUCAGAAUAAACGCUCAAUGUAGGCUAGUACCGACCUGCGUGCCUCGCUCCUUUUCAUGCAUGCAUGAGGCCCGGAUCCGGC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd × 10e4: 100 ± 6 (1/s), nan |
https://pubmed.ncbi.nlm.nih.gov/12692304/ | ssRNA | 11-1 | Angiopoietin-2 (Ang2) | GGGAGGACGAUGCGGACUAGCCUCAUCAGCUCAUGUGCCCCUCCGCCUGGAUCACCAGACGACUCGCUGAGGAUCCGAGA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 3.1 nM, 3,1 |
https://pubmed.ncbi.nlm.nih.gov/12692304/ | ssRNA | 11-1.41 | Angiopoietin-2 (Ang2) | GAGGACGAUGCGGACUAGCCUCAUCAGCUCAUGUGCCCCUC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 2.2 nM, 2,2 |
https://pubmed.ncbi.nlm.nih.gov/14576330/ | 2'-O-Me-RNA | Spiegelmer STAR-F12 | Migraine-associated calcitonin gene-related peptide 1 (alpha-CGRP; α-CGRP) | GGACUGAUGGCGCGGUCCUAUUACGCCGAAAGGGAGAGGGGAGACAGG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 2.5 nM, 2,5 |
https://pubmed.ncbi.nlm.nih.gov/14500841/ | ssDNA | V-2 | Ribonucleases (RNase) H1, Human | GCCTGTTGTGAGCCTCCTCTCGAAGCTGGTCTCTGCGGGTTGTTGCGCCGCGGCACCCTTGGCATTGAGCGTTTATTCTTGTCTCCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 26.5 ± 2.5 nM, 26,5 |
https://pubmed.ncbi.nlm.nih.gov/14500841/ | ssDNA | VI-2 | Ribonucleases (RNase) H2, Human | CGGTCGCTCCGTGTGGCTTGGGTTGGGTGTGGCAGTGAC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 11 ± 0.8 nM, 11 |
https://pubmed.ncbi.nlm.nih.gov/12557236/ | ssRNA | T705 | Thrombin, Bovine | GCAAUGGUACGGUACUUCCUUUGGAAGAUAGCUGGAGAACUAACCAAAAGUGCACGCUACUUUGCUAA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 164 nM, 164 |
https://pubmed.ncbi.nlm.nih.gov/12557236/ | ssRNA | T710 | Thrombin, Bovine | GCAAUGGUACGGUACUUCCAAGUGCGGGGGGGAGGUGGUGGUUCCAAAAGUGCACGCUACUUUGCUAA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 240 nM, 240 |
https://pubmed.ncbi.nlm.nih.gov/12874383/ | ssRNA | A30 | Oligomeric state of the extracellular domains of human epidermal growth factor receptor-3 (HER3ECD) | GGGAAUUCCGCGUGUGCCAGCGAAAGUUGCGUAUGGGUCACAUCGCAGGCACAUGUCAUCUGGGCGGUCCGUUCGGGAUCCUC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 45 nM in hrg-unbound; 400 nM in hrg-bound, 45 |
https://pubmed.ncbi.nlm.nih.gov/12582125/ | 2'-fluoro-RNA | cl. 9 | Variant surface glycoprotein 221 (sVSG 221) | GAAUUCAGUCGGACAGCGGGAUGAUGCCGCACUGACGCCACGUAGGUGGCGCACAGCCGAUGGACGAAUAUCGUCUCCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 0.16 ± 0.02 nM, 0,16 |
https://pubmed.ncbi.nlm.nih.gov/12582125/ | 2'-fluoro-RNA | cl. 9 | Variant surface glycoprotein 117 (sVSG 117) | GAAUUCAGUCGGACAGCGGGAUGAUGCCGCACUGACGCCACGUAGGUGGCGCACAGCCGAUGGACGAAUAUCGUCUCCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/12582125/ | 2'-fluoro-RNA | cl. 57 | Variant surface glycoprotein 221 (sVSG 221) | GAAUUCAGUCGGACAGCGAGCGCGCACCUACUGUGAUGUAGAAGUCACAGCAAGGCCCGAUGGACGAAUAUCGUCUCCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 0.03 ± 0.05, 0,03 |
https://pubmed.ncbi.nlm.nih.gov/12582125/ | 2'-fluoro-RNA | cl. 57 | Variant surface glycoprotein 117 (sVSG 117) | GAAUUCAGUCGGACAGCGAGCGCGCACCUACUGUGAUGUAGAAGUCACAGCAAGGCCCGAUGGACGAAUAUCGUCUCCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 0.4 ± 0.09 nM , 0,4 |
https://pubmed.ncbi.nlm.nih.gov/12649492/ | ssRNA | #11 | Mammalian translation initiation factor 4A (eIF4A) | GGGAGACAAGAAUAAAACGCUCAAACAUUGCAUCGACAGCUGCAAGGCUCCCGCCGUACAAACCUUCGACAGGAGGCUCACAACAGGC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 8 μM, 8000 |
https://pubmed.ncbi.nlm.nih.gov/12649492/ | ssRNA | #1 | Mammalian translation initiation factor 4A (eIF4A) | GGGAGACAAGAAUAAAACGCUCAACAGGCGUUUAGCCUCUAAGUAACAGGGGCCUCCCAUGAGCUUCGACAGGAGGCUCACAACAGGC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 3 μM, 3000 |
https://pubmed.ncbi.nlm.nih.gov/12649492/ | ssRNA | #20 | Mammalian translation initiation factor 4A (eIF4A) | GGGAGACAAGAAUAAAACGCUCAAGGGGACCGCGCCCCACAUGUGAGUGAGGCCGAAACGUAGAUUCGACAGGAGGCUCACAACAGGC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 44 nM, 44 |
https://pubmed.ncbi.nlm.nih.gov/12649492/ | ssRNA | #30 | Mammalian translation initiation factor 4A (eIF4A) | GGGAGACAAGAAUAAAACGCUCAAUGUGGAUGAUUUGUAUGAUCGCGCAUACAAUUCGACAGGAGGCUCACAACAGGC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 1 μM, 1000 |
https://pubmed.ncbi.nlm.nih.gov/12649492/ | ssRNA | no.21 | Mammalian translation initiation factor 4A (eIF4A) | GGGAGACAAGAAUAAAACGCUCAAGGGGACCGCGCCCCACAUGUGAGUGAGGCCGAAACAUAGAUUCGACAGGAGGCUCACAACAGGC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 27 nM, 27 |
https://pubmed.ncbi.nlm.nih.gov/12668310/ | ssDNA | N17 | Differentiated pheochromocytoma cells (PC12 cells), Rat | TAATACGACTCACTATAGCAATGGTACGGTACTTCCGGTTGGATGTAAGGTTGGAGGGGGGCAAAAGTGCACGCTACTTTG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
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