reference stringlengths 7 774 ⌀ | aptamer_chemistry stringclasses 21
values | aptamer_name stringlengths 1 164 | target_name stringlengths 2 1.2k ⌀ | aptamer_sequence stringlengths 2 380 | origin stringclasses 6
values | target_chemistry stringclasses 11
values | external_id stringclasses 509
values | target_sequence stringclasses 357
values | new_affinity stringlengths 3 193 ⌀ |
|---|---|---|---|---|---|---|---|---|---|
https://pubmed.ncbi.nlm.nih.gov/16799875/ | ssRNA | RM207 | Recombinant ovine PrP (Prion protein) of the susceptible-specific (V136R154Q171) | GAGGAUCCGCCGAGUAACAGUGCCAUGAGUGAAAUAAAACCAUCCGGAACUAAGACUGCGCUUGAGGCUCGAAUUCGCCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 55.3 ± 1.4 nM (VRQ), 55,3 |
https://pubmed.ncbi.nlm.nih.gov/16799875/ | ssRNA | RM14 | Recombinant ovine PrP (prion protein) of the susceptible-specific (V136R154Q171) or resistant-specific (A136R154R171) alleles | GAGGAUCCGCCGAGUAACAGCGUGCAGGUACUAGCUCCACCCCGAGGGGGCACAUCAUUUCUUGAGGCUCGAAUUCGCCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 20 nM, 20 |
https://pubmed.ncbi.nlm.nih.gov/16446497/ | ssDNA | SSAP1-4 | Recombinant human (rhu) cellular prlon protein (Prpc) | TTTGGTCCTTGTCTTATGTCCAGAATGCGCGGATCGTGATTTCTCCTACTGGGATAGGTGGATTAT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/16446497/ | ssDNA | SSAP1-9 | Recombinant human (rhu) cellular prlon protein (Prpc) | TTTGGTCCTTGTCTTATGTCCAGAATGCGGCTACAGGCATTTCTCCTACTGGGATAGGTGGATTAT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/16446497/ | ssDNA | SSAP3-10 | Recombinant human (rhu) cellular prlon protein (Prpc) | TTTGGTCCTTGTCTTATGTCCAGAATGCGTGGGGCAATTTCTCCTACTGGGATAGGTGGATTAT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/16467303/ | ssRNA | R9-2 | Caenorhabditis elegans Bcl-2 homolog CED-9 | AGGGAGGACGAUGCGGGGUGCUUCGAGCGUAGGAAGAAAGCCGGGGGCUGCAGAUAAUGUAUAGCCAGACGACGGA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: ~4nM, 4 |
https://pubmed.ncbi.nlm.nih.gov/16467303/ | ssRNA | R9-7 | Caenorhabditis elegans Bcl-2 homolog CED-9 | AGGGAGGACGAUGCGGGAUGGACGCUUAUCCGCAUAGAGGUUUACUACUUCGGAGACUGCCGAUACAGACGACGGA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: ~16 nM, 16 |
https://pubmed.ncbi.nlm.nih.gov/16940097/ | ssDNA | r10/43 | RNA-dependent RNA polymerase (RdRp) (nonstructural protein 5B [NS5B]) of HCV subtype 3a | GGGAGACAAGAATAAACGCTCAAGGGCGTGGTGGGTGGGGTACTAATAATGTGCGTTTGTTCGACAGGAGGCTCACAACAGGC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 1.3 ± 0.3 nM, 1,3 |
https://pubmed.ncbi.nlm.nih.gov/16940097/ | ssDNA | r10/47 | RNA-dependent RNA polymerase (RdRp) (nonstructural protein 5B [NS5B]) of HCV subtype 3a | GGGAGACAAGAATAAACGCTCAATTGGGGTCTGCTCGGGATTGCGGAGAACGTGAATCTTTCGACAGGAGGCTCACAACAGGC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 23.5 ± 6.7 nM , 23,5 |
https://pubmed.ncbi.nlm.nih.gov/17030508/ | ssRNA | clone 5 | Bovine factor IX | GGGAGCUCAGCCUUCACUGCCUACGCGGGCGUUUACGUAACGGCUUAUGGGGAGCUGAGCGCUUGACCGUGGUAGUGCUAAGCAGUAAACGAGGGCACCACGGUCGGAUCCAC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 10 nM, 10 |
https://pubmed.ncbi.nlm.nih.gov/16751591/ | ssRNA | Class A-20 | Influenza B virus hemagglutinin (HA) (B/Johannesburg/05/1999), Human | GGGAGCUCAGCCUUCACUGCACUCCGGCUGGUGGACGCGGUACGAGCAAUUUGUACCGGAUGGAUGUUCGGGCAGCGGUGUGGCAGGGAUGAGCGGCACCACGGUCGGAUCCAC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 44 ± 6 nM, 44 |
https://pubmed.ncbi.nlm.nih.gov/16888322/ | ssRNA | TH14 | Cytoplasmic tail of BACE (B1-CT) | GGGAUAGGAUCCACAUCUACGUAUUACGCAACGCCGGGCCACUACGCGAAUGGCAAGCCCGUCGACUUCACUGCAGACUUGACGAAGCUU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 280 nM, 280 |
https://pubmed.ncbi.nlm.nih.gov/16888322/ | ssRNA | S10 | Cytoplasmic tail of BACE (B1-CT) | GGGAUAGGAUCCACAUCUACGUAUUAGUACACGUCGGCCACCUACGCGAAGUGGAAGCCUCAUUUGUUCACUGCAGACUUGACGAAGCUU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 360 nM, 360 |
https://pubmed.ncbi.nlm.nih.gov/16476969/ | ssRNA | P30-10-16 | Haemagglutinin (HA) region of the target strain A/Panama/2007/1999(H3N2) | GGGAGAAUUCCGACCAGAAGGGUUAAGCAGUCGGCAUGCGGUACAGACAGACCUUUCCUCUCUCCUUCCUCUUCU | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 188 pM, 0,188 |
https://pubmed.ncbi.nlm.nih.gov/16518777/ | ssDNA | A3 | Ricin toxin | ATAGGAGTCACGACGACCAGAACCGTAGGTTCGGGGTCGGAGTGGTCCGGAAGGTGGCGTGGTATGTGCGTCTACCTCTTGACTAAT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 105 ± 41 nM, 105 |
https://pubmed.ncbi.nlm.nih.gov/16518777/ | ssDNA | C1 | Ricin toxin | ATAGGAGTCACGACGACCAGAACCGTAGGTTCGGGGTCGGAGTGGTCCGGAAGATGGCGTGGTATGTGCGTCTACCTCTTGACTAAT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 80 ± 38 nM, 80 |
https://pubmed.ncbi.nlm.nih.gov/16518777/ | ssDNA | C5 | Ricin toxin | ATAGGAGTCACGACGACCAGAACCGTAGGTTCGGGGCGGAGTGGTCCGGAAGGTGGCGTGGTATGTGCGTCTACCTCTTGACTAAT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 58 ± 19 nM, 58 |
https://pubmed.ncbi.nlm.nih.gov/17028752/ | ssDNA | PB9 aptamer | Protein kinase C-delta (PKCδ) | GCCAGGGGTTCCACTACGTAGAACACGACGGGAATACTGACTCTCCCCCATGTACCAGGGGGCAGAGAGAAGGGC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 122 nM, 122 |
https://pubmed.ncbi.nlm.nih.gov/16540230/ | ssRNA | A07 | Recombinant transforming growth factor-beta type III receptor displayed on cell surface | GGGCCAGGCAGCGAGAGAUAAGCAGAAGAAGUAUGUGACCAUGCUCCAGAGAGCAACUUCACAUGCGUAGCCAAACCGACCACACGCGUCCGAGA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 2.47 nM, 2,47 |
https://pubmed.ncbi.nlm.nih.gov/17038331/ | ssRNA | FC5 | Coedine | GGGACAGGGCUAGCAGUAGGAUUGGGUGAGGGGAUGUGCUGUGGAGGCAAAGCUUCCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 4.00 ± 0.13 μM, 4000 |
https://pubmed.ncbi.nlm.nih.gov/17038331/ | ssRNA | FC45 | Coedine | GGGACAGGGCUAGCUUAGUGCUAUGUGAGAAAAGGGUGUGGGGGGAGGCAAAGCUUCCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 2.50 ± 0.06 μM, 2500 |
https://pubmed.ncbi.nlm.nih.gov/17079480/ | ssRNA | pUC19 | S37A-β-catenin, Human | GGACGCGUGGUACCAGGCCGAUCUAUGGACGCUAUAGGCACACCGGAUACUUUAACGAUUGGCUAAGCUUCCGCGGGGAUC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: ~5.0 nM, 5 |
https://pubmed.ncbi.nlm.nih.gov/17588619/ | ssRNA | Aptamer #25 | Alpha-Amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid (AMPA) (α-Amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid) receptors | ACCGAGUCCAGAAGCUUGUAGUACUCGGCGAACUACCUAACCCCCCACAAUUGUAUUAUCGCCCGCCUAGAUGGCAGUUGAAUUCUCCCUAUAGUGAGUCGUAUUAC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 37 ± 5 nM, 37 |
https://pubmed.ncbi.nlm.nih.gov/17660953/ | ssDNA | aptamer 16 | DC-specific intercellular adhesion molecule (ICAM)-3 grabbing non-integrin (DC-SIGN) | CGGGGATCCGGAATTCTCCTCACAGGCGAAAATTTGTGGATATAGAGGGTTACTCGGATGTATGTCGACGAAGCTTGCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 21.73 nM, 21,73 |
https://pubmed.ncbi.nlm.nih.gov/17163839/ | ssRNA | ApT4-A | Thyroxine (T4) | GAAUUCGUCGACGGAUCCGCAGUGCGUCUUGGGUUGUGAGCUCCCGGCUCGCAUUGUGAGGUGGAGGGGGACGUGCUGCAGGUCGACGCAUGCGCCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 50±10 μM, 50000 |
https://pubmed.ncbi.nlm.nih.gov/17055241/ | ssDNA | Ab1 | Abrin toxin, Abrus precatorius (A.precatorius) | CAGCTCAGAAGCTTGATCCTGTGAGCGAAAATCCGGAGTAGAGGAGCAGCTGGGTGCTGACTCGAAGTCGTGCATCTGCA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 76 ± 28 nM, 76 |
https://pubmed.ncbi.nlm.nih.gov/17055241/ | ssDNA | Ab2 | Abrin toxin, Abrus precatorius (A.precatorius) | CAGCTCAGAAGCTTGATCCTGTGCAGCCGGGGGACAAGCGCGTTGGCCAGATCATCCGACTCGAAGTCGTGCATCTGCA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 89 ± 32, 89 |
https://pubmed.ncbi.nlm.nih.gov/17055241/ | ssDNA | Ab3 | Abrin toxin, Abrus precatorius (A.precatorius) | CAGCTCAGAAGCTTGATCCTGTGCGAAAAGGATGCGGGCAGCGGACTCAAGGCCATCTGACTCGAAGTCGTGCATCTGCA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 50 ± 15, 50 |
https://pubmed.ncbi.nlm.nih.gov/17055241/ | ssDNA | Ab4 | Abrin toxin, Abrus precatorius (A.precatorius) | CAGCTCAGAAGCTTGATCCTGTGCGGGGCAAAGAGGTCCGAATTTGAAGGCTCCCCTGGACTCGAAGTCGTGCATCTGCA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 104 ± 47, 104 |
https://pubmed.ncbi.nlm.nih.gov/17055241/ | ssDNA | Ab5 | Abrin toxin, Abrus precatorius (A.precatorius) | CAGCTCAGAAGCTTGATCCTGTGAAGGGCTGATGAGGGGCGTAGCGGCTTGTTCGTAAGACTCGAAGTCGTGCATCTGCA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 81 ± 26, 81 |
https://pubmed.ncbi.nlm.nih.gov/17055241/ | ssDNA | Ab6 | Abrin toxin, Abrus precatorius (A.precatorius) | CAGCTCAGAAGCTTGATCCTGTGAGGAATGCTCATGCATAGCAAGGGCTAAACACGGCGACTCGAAGTCGTGCATCTGCA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 28 ± 9 nM, 28 |
https://pubmed.ncbi.nlm.nih.gov/17055241/ | ssDNA | Ab7 | Abrin toxin, Abrus precatorius (A.precatorius) | CAGCTCAGAAGCTTGATCCTGTGCGATCGAATGAAAGCTGCTGGATTGTCGCTATCCTGACTCGAAGTCGTGCATCTGCA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 67 ± 29, 67 |
https://pubmed.ncbi.nlm.nih.gov/17055241/ | ssDNA | Ab8 | Abrin toxin, Abrus precatorius (A.precatorius) | CAGCTCAGAAGCTTGATCCTGTGCGGGCGGCAAGGCCCTGACAGAGATACTGGCTCGGGACTCGAAGTCGTGCATCTGCA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 130 ± 54, 130 |
https://pubmed.ncbi.nlm.nih.gov/19164908/ | ssDNA | Clone 4-9 | Prion protein (PrP), Mouse | ATACCAGTCTATTCAATTGGGCCCTTTTCTGTGTCTTTCTGTGCCCTTAGATAGTATGTGCAATCA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 1.13 × 10−7\xa0M, 113 |
https://pubmed.ncbi.nlm.nih.gov/17904852/ | ssRNA | aptamer-2 | Biased conformation(s) of calsenilin | GGGACGCGUGGUACCGACGGAGGCUUGUUUAUGUAGGGAUGUAAGGGGAUGGGCAAUGUGGCGACAGCUUCCGCGGGGAUC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 43 nM for Ca2+ bound, 79 nM for Ca2+ unbound, 43 |
https://pubmed.ncbi.nlm.nih.gov/17904852/ | ssRNA | aptamer-12 | Biased conformation(s) of calsenilin | GGGACGCGUGGUACCAAAGAGGCUGCGCGGAAGUGAGGGUGUUGGUUACGAAGGUUGGUGUGUGAAGCUUCCGCGGGGAUC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 190 nM for Ca2+ bound, 190 |
https://pubmed.ncbi.nlm.nih.gov/17493639/ | ssDNA | #9 | Advanced glycation end products (AGE), Human serum albumin | AGCTCAGAATGGATCCAAACGCTCATAACTCACTCCATACTCACTTGCTGATTCGCCAACAACACACCCTTAAACAGTCCCTTCGACATGAGAATTCGGCCGGATC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 1 μM, 1000 |
https://pubmed.ncbi.nlm.nih.gov/17188871/ | ssRNA | II-1 | Release factor 1, Escherichia coli (E. Coli) | GGACCGAGAAGYYACCCAGGAUUGCGUGUUAAGGCGCUCGGCUCGAUAUUUAUGCUGGUCAUGGUGGACGCACAUCGCAGCAAC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 30 ± 6 nM, 30 |
https://pubmed.ncbi.nlm.nih.gov/17878167/ | ssRNA | M-2 | Amyloid-like fibrils formed in vitro from monomeric beta-2-microglobulin (β2m) | GGGCCAAGCUUGCAUGCCUGCAGUUGGUUACGCGUACAGUGAAACUCGGAAAGUUGAAGGGCCAAAUGGGAACGGUACCGAGCUCAGGUUCCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 1.15E-08 M, 11,5 |
https://pubmed.ncbi.nlm.nih.gov/17878167/ | ssRNA | WL-2 | Amyloid-like fibrils formed in vitro from monomeric beta-2-microglobulin (β2m) | GGGCCAAGCUUGCAUGCCUGCAGAAAAAUAAAGUGUGUACACUAAAUUGCUAGCCCCCGGAAAGAAGGUCAACAAAAGUCAGUGGUACCGAGCUCAGGUUCCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 7.48E-09 M, 7,48 |
https://pubmed.ncbi.nlm.nih.gov/17878167/ | ssRNA | LS-5 | Amyloid-like fibrils formed in vitro from monomeric beta-2-microglobulin (β2m) | GGGCCAAGCUUGCAUGCCUGCAGGCAAACGGGGGCGUUUCGGCGGAGGAGUGGGAAGAAAAACGAGAGAAGAGUUGGAACGGGUACCGAGCUCAGGUUCCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 2.21E-08 M, 22,1 |
https://pubmed.ncbi.nlm.nih.gov/17929340/ | ssDNA | Apt A | Bifunctional ribulose 5-phosphate reductase (Bcs1) | CAGGTCCATCGAGTGGTAGGAGTAGTTATTGGAGGGGTGGGCGGGAAGCGACGATTGTGGGTCGCACTGCTCCTGAACGTAC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 39 nM, 39 |
https://pubmed.ncbi.nlm.nih.gov/17929340/ | ssDNA | Apt B | Bifunctional ribulose 5-phosphate reductase (Bcs1) | CAGGTCCATCGAGTGGTAGGAGGTGCGAAATTGGGGGGGTGGGGTAGCGGTGTTGAGCACATCGCACTGCTCCTGAACGTAC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 29 nM, 29 |
https://pubmed.ncbi.nlm.nih.gov/17475212/ | 2'-fluoro-RNA | 9-14 | Hepatitis C virus (HCV) | GGGCCGUUCGAACACGAGCAUGUUGUCUACGUUGUAGAAGCUGUUAUGGUAGGUACUUCCACGAGGUAUCAACGGAGUUGGUGGACAGUACUCAGGUCAUCCUAGG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 142 nM via format protein chip assay (Biacore), 142 |
https://pubmed.ncbi.nlm.nih.gov/17475212/ | 2'-fluoro-RNA | 9-15 | Hepatitis C virus (HCV) | GGGCCGUUCGAACACGAGCAUGGAUCGAGGAUGGGAACACCCAGUAGGAGGAUGGGCAUGGCCGGACCCAAAAUUAGCAGUGGGACAGUACUCAGGUCAUCCUAGG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 224 nM via format protein chip assay (Biacore), 224 |
https://pubmed.ncbi.nlm.nih.gov/17929944/ | ssRNA | AN58 | Recombinant GluR2Qflip AMPA receptor transiently expressed in HEK-293 (human embryonic kidney) cells | GGGCGAAUUCAACUGCCAUCUAGGCAGUAACCAGGAGUUAGUAGGACAAGUUUCGUCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 0.419 ± 0.221 nM & IC50: 121 ± 7 nM, 0,419 |
https://pubmed.ncbi.nlm.nih.gov/17530817/ | ssDNA | TC01 | Ramos (CRL-1596, B lymphocyte, human Burkitt's lymphoma) cells | AAGGAGCAGCGTGGAGGATAACCAAACACAGATGCAACCTGACTTCTAACGTCATTTGGTGTTAGGGTGTGTCGTCGTGGT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 17.8\u2009±\u20092.1 nM, 17,8 |
https://pubmed.ncbi.nlm.nih.gov/17530817/ | ssDNA | TD05 | Ramos (CRL-1596, B lymphocyte, human Burkitt's lymphoma) cells | AACACCGTGGAGGATAGTTCGGTGGCTGTTCAGGGTCTCCTCCCGGTG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 74.7\u2009±\u20098.7 nM, 74,7 |
https://pubmed.ncbi.nlm.nih.gov/17530817/ | ssDNA | TD08 | Ramos (CRL-1596, B lymphocyte, human Burkitt's lymphoma) cells | AAGGAGCAGCGTGGAGGATACTCTAATTGCCGTATAAGGTCAGGGGGTTGGTTGGTTCCTAGTGCTTAGGGTGTGTCGTCGTGGT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 3.26\u2009±\u20090.13 nM, 3,26 |
https://pubmed.ncbi.nlm.nih.gov/17530817/ | ssDNA | TD09 | Ramos (CRL-1596, B lymphocyte, human Burkitt's lymphoma) cells | AAGGAGCAGCGTGGAGGATAGCTGTCATCGGCTTATGTGCTTTCCAGGGTCCGTGCTGTCCGTTGTTAGGGTGTGTCGTCGTGGT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 5.15\u2009±\u20090.96 nM, 5,15 |
https://pubmed.ncbi.nlm.nih.gov/17530817/ | ssDNA | TE02 | Ramos (CRL-1596, B lymphocyte, human Burkitt's lymphoma) cells | AAGGAGCAGCGTGGAGGATATAGGCAGTGGTTTGACGTCCGCATGTTGGGAATAGCCACGCCTTTAGGGTGTGTCGTCGTGGT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 0.76\u2009±\u20090.13 nM, 0,76 |
https://pubmed.ncbi.nlm.nih.gov/17530817/ | ssDNA | TE04 | Ramos (CRL-1596, B lymphocyte, human Burkitt's lymphoma) cells | AAGGAGCAGCGTGGAGGATATCCTCGATGCACCAGTTCACCTTATTTGCTTCTTCTCTCTGTTCTGACTGGGTGCTGAGGATTAGGGTGTGTCGTCGTGGT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 207\u2009±\u200941 nM, 207 |
https://pubmed.ncbi.nlm.nih.gov/17530817/ | ssDNA | TE13 | Ramos (CRL-1596, B lymphocyte, human Burkitt's lymphoma) cells | AAGGAGCAGCGTGGAGGATAAGGCCCCCAGGCTCGGTGGATGCAAACACATGACTATGGGCCCGTTTAGGGTGTGTCGTCGTGGT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 202\u2009±\u200952 nM, 202 |
https://pubmed.ncbi.nlm.nih.gov/17697378/ | ssDNA | A38 | Vaccinia virus (VACV) as a model for orthopoxviruses (OPV) | TACGACTCACTATAGGGATCCTGTATATATTTTGCAACTAATTGAATTCCCTTTAGTGAGGGTT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | IC50: 0.59 μM, nan |
https://pubmed.ncbi.nlm.nih.gov/18983163/ | ssDNA | 1.12.2 | Ochratoxin A (OTA) | GATCGGGTGTGGGTGGCGTAAAGGGAGCATCGGACA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 0.2, 0,2 |
https://pubmed.ncbi.nlm.nih.gov/18983163/ | ssDNA | 1.12.8 | Ochratoxin A (OTA) | GATCGGGTGTGGGTGGCGTAAAGGGAGCATCGG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 0.2, 0,2 |
https://pubmed.ncbi.nlm.nih.gov/18983163/ | ssDNA | 1.12.9 | Ochratoxin A (OTA) | GATCGGGTGTGGGTGGCGTAAAGGGAGCAT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 1.6, 1,6 |
https://pubmed.ncbi.nlm.nih.gov/18983163/ | ssDNA | 1.12.11 | Ochratoxin A (OTA) | GATCGGGTGTGGGTGGCGTAAAGGGAGCATCG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 0.4, 0,4 |
https://pubmed.ncbi.nlm.nih.gov/17988875/ | ssDNA | No. 4 | Oxytetracycline (OTC) | CGTACGGAATTCGCTAGCCGACGCGCGTTGGTGGTGGATGGTGTGTTACACGTGTTGTGGATCCGAGCTCCACGTG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 9.61 ± 0.3 nM, 9,61 |
https://pubmed.ncbi.nlm.nih.gov/17988875/ | ssDNA | No. 5 | Oxytetracycline (OTC) | CGTACGGAATTCGCTAGCACGTTGACGCTGGTGCCCGGTTGTGGTGCGAGTGTTGTGTGGATCCGAGCTCCACGTG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 12.08 ± 2.25 nM, 12,08 |
https://pubmed.ncbi.nlm.nih.gov/17988875/ | ssDNA | No. 20 | Oxytetracycline (OTC) | CGTACGGAATTCGCTAGCCGAGTTGAGCCGGGCGCGGTACGGGTACTGGTATGTGTGGGGATCCGAGCTCCACGTG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 56.84 ± 3.62 nM, 56,84 |
https://pubmed.ncbi.nlm.nih.gov/17694298/ | ssDNA | MUC1-5TR-1 | Mucin 1 (MUC1) recombinant protein MUC1-5TR | GGGAGACAAGAATAAACGCTCAAGAAGTGAAAATGACAGAACACAACATTCGACAGGAGGCTCACAACAGGC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 47.3 ± 0.984 nM, 47,3 |
https://pubmed.ncbi.nlm.nih.gov/17694298/ | ssDNA | MUC1-5TR-2 | Mucin 1 (MUC1) recombinant protein MUC1-5TR | GGGAGACAAGAATAAACGCTCAAGGCTATAGCACATGGGTAAAACGACTTCGACAGGAGGCTCACAACAGGC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 85.2 ± 0.986 nM, 85,2 |
https://pubmed.ncbi.nlm.nih.gov/17694298/ | ssDNA | MUC1-5TR-3 | Mucin 1 (MUC1) recombinant protein MUC1-5TR | GGGAGACAAGAATAAACGCTCAACAAACAATCAAACAGCAGTGGGGTGTTCGACAGGAGGCTCACAACAGGC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 83.0 ± 0.981 nM, 83 |
https://pubmed.ncbi.nlm.nih.gov/17694298/ | ssDNA | MUC1-5TR-4 | Mucin 1 (MUC1) recombinant protein MUC1-5TR | GGGAGACAAGAATAAACGCTCAATACTGCATGCACACCACTTCAACTATTCGACAGGAGGCTCACAACAGGC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 69.0 ± 0.974 nM, 69 |
https://pubmed.ncbi.nlm.nih.gov/19037734/ | 2'-fluoro-RNA | ANG9-4 | Angiopoietin-1 (Ang1) | GGGAGAGAGGAAGAGGGAUGGGACUCGAACAUUUCCACUAACCAACCAUACUAAAGCACCGCCAUAACCCAGAGGUCGAUAGUACUGGAUCCCCCC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 2.8 nM, 2,8 |
https://pubmed.ncbi.nlm.nih.gov/18806954/ | ssDNA | A | Anti-neuroexcitation peptide III (ANEPIII) | TAATACGACTCACTATAGGGAATTCTATCCGGGTACCAAACTGAATACTGGGAATCAATTCCCTATAGTGAGTCGTATTAGCTAGTAAGCTTGCCGT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 228.4 nM and 7485.3 nM *this Kd was determined with affinity test on entire n round pool, 228,4 |
https://pubmed.ncbi.nlm.nih.gov/18806954/ | ssDNA | B | Anti-neuroexcitation peptide III (ANEPIII) | TAATACGACTCACTATAGGGAATTCTATCCGGGTAAAGCTGGCCACCGGAATACTGGAAATCTGGATCCCTGCTAGTAAGCTTGCCGT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 228.4 nM and 7485.3 nM *this Kd was determined with affinity test on entire n round pool, 228,4 |
https://pubmed.ncbi.nlm.nih.gov/18806954/ | ssDNA | C | Anti-neuroexcitation peptide III (ANEPIII) | TAATACGACTCACTATAGGGAATTCTATCCGGGTATAGGGAATTCTATCCGGGCTAGTTTCGAAGCCGTAAGACTGGAGATCTGGATCCCTGCTAGTAAGCTTGCCGT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 228.4 nM and 7485.3 nM *this Kd was determined with affinity test on entire n round pool, 228,4 |
https://pubmed.ncbi.nlm.nih.gov/18806954/ | ssDNA | D | Anti-neuroexcitation peptide III (ANEPIII) | TAATACGACTCACTATAGGGAATTCTATCCGGGTAGCTTCCAAACTGAATACTGGGATTCAATTCCCTATAGTGAGTCGTATTAGCTAGTAAGCTTGCCGT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 228.4 nM and 7485.3 nM *this Kd was determined with affinity test on entire n round pool, 228,4 |
https://pubmed.ncbi.nlm.nih.gov/18806954/ | ssDNA | E | Anti-neuroexcitation peptide III (ANEPIII) | TAATACGACTCACTATAGGGAATTCTATCCGGGTACCAAACTAGCTACTGGGAATCAATTCCCTATAGTGAGTCGTATTAGCTAGTAAGCTTGCCGT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 228.4 nM and 7485.3 nM *this Kd was determined with affinity test on entire n round pool, 228,4 |
https://pubmed.ncbi.nlm.nih.gov/18806954/ | ssDNA | F | Anti-neuroexcitation peptide III (ANEPIII) | TAATACGACTCACTATAGGGAATTCTATCCGGGTACCAAACTAGCTACCGGGATACAATTCCCTATAGTGAGTCGTATTAGCTAGTAAGCTTGCCGT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 228.4 nM and 7485.3 nM *this Kd was determined with affinity test on entire n round pool, 228,4 |
https://pubmed.ncbi.nlm.nih.gov/18806954/ | ssDNA | G | Anti-neuroexcitation peptide III (ANEPIII) | TAATACGACTCACTATAGGGAATTCTATCCGGGTAACGGCTTCCAAACTAGCTACCCGGATAGAATTCCCTATAGTGAGTCGTATTAAGGCTAGTAAGCTTGCCGT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 228.4 nM and 7485.3 nM *this Kd was determined with affinity test on entire n round pool, 228,4 |
https://pubmed.ncbi.nlm.nih.gov/18806954/ | ssDNA | H | Anti-neuroexcitation peptide III (ANEPIII) | TAATACGACTCACTATAGGGAATTCTATCCGGGTACGGCTTCCAAACTAGCTACCGGGATTGAATTCCCTATAGTGAGTCGTATTAGCTAGTAAGCTTGCCGT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 228.4 nM and 7485.3 nM *this Kd was determined with affinity test on entire n round pool, 228,4 |
https://pubmed.ncbi.nlm.nih.gov/18806954/ | ssDNA | I | Anti-neuroexcitation peptide III (ANEPIII) | TAATACGACTCACTATAGGGAATTCTATCCGGGTAAAGCTGGCCACCGGAAGACTGGAGATCTGGATCCCTGCTAGTAAGCTTGCCGT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 228.4 nM and 7485.3 nM *this Kd was determined with affinity test on entire n round pool, 228,4 |
https://pubmed.ncbi.nlm.nih.gov/18806954/ | ssDNA | J | Anti-neuroexcitation peptide III (ANEPIII) | TAATACGACTCACTATAGGGAATTCTATCCGGGTAAAGCTGACTACCTATCTACTGGTCTTCTGGGTCCCTGCTAGTAAGCTTGCCGT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 228.4 nM and 7485.3 nM *this Kd was determined with affinity test on entire n round pool, 228,4 |
Identification of ssDNA aptamers specific for anti-neuroexcitation peptide III and molecular modeling studies: insights into structural interactions | ssDNA | K | Anti-neuroexcitation peptide III (ANEPIII) | TAATACGACTCACTATAGGGAATTCTATCCGGGTACGGCTTCGAAACTAGCCCGGATAGAATTCCCTATAGTGAGTCGTATTAGCTAGTAAGCTTGCCGT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 228.4 nM and 7485.3 nM *this Kd was determined with affinity test on entire n round pool, 228,4 |
https://pubmed.ncbi.nlm.nih.gov/18433888/ | ssDNA | 4C3 | Proteinase K-resistant isoform (PrPSc) | GGTATTGAGGGTCGCATCTGGCTTTCCTTTCTTCTCACTCCCCTGTTCTCTTCGTCTCTTGTTGATGGCTCTAACTCTCCTCT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 48 nM, 48 |
https://pubmed.ncbi.nlm.nih.gov/18433888/ | ssDNA | 4C5 | Proteinase K-resistant isoform (PrPSc) | GGTATTGAGGGTCGCATCTGGCTTTTCTTTCTTCTCACTCCCCTGTTCTCTTCGTCTCTTGTTGATGGCTCTAACTCTCCTCT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 30 nM, 30 |
https://pubmed.ncbi.nlm.nih.gov/18433888/ | ssDNA | 4C6 | Proteinase K-resistant isoform (PrPSc) | GGTATTGAGGGTCGCATCGTTTTGTTACAGTTCGTTTCTTTTCCCTGTCTTGTTTTGTTGTCTGATGGCTCTAACTCTCCTCT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 20 nM, 20 |
https://pubmed.ncbi.nlm.nih.gov/18433888/ | ssDNA | 4C8 | Proteinase K-resistant isoform (PrPSc) | GGTATTGAGGGTCGCATCTTTCTGTCTTGTGTTACTTGTTTGTCCGGTTTCTTTTCTCCCCCCGATGGCTCTAACTCTCCTCT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 56 nM, 56 |
https://pubmed.ncbi.nlm.nih.gov/18433888/ | ssDNA | 4C10 | Proteinase K-resistant isoform (PrPSc) | GGTATTGAGGGTCGCATCTTTCTGTCTTGTGTTACTTGTTTGTCCGGTTTCTTTTCTCCCCCTGATGGCTCTAACTCTCCTCT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 33 nM, 33 |
https://pubmed.ncbi.nlm.nih.gov/18433888/ | ssDNA | 4C17 | Proteinase K-resistant isoform (PrPSc) | GGTATTGAGGGTCGCATCTCCTTTTGTGTGTTTTTTTTATTGTTTTTTTTTTGTTTTTGATGGCTCTAACTCTCCTCT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 19 nM, 19 |
https://pubmed.ncbi.nlm.nih.gov/18433888/ | ssDNA | 4C20 | Proteinase K-resistant isoform (PrPSc) | GGTATTGAGGGTCGCATCGTTTCTTCCTTTGGCCTTTCTTCCGTCTTTCTGTTGTTCTTACCTGATGGCTCTAACTCTCCTCT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 79 nM, 79 |
https://pubmed.ncbi.nlm.nih.gov/18433888/ | ssDNA | 4C26 | Proteinase K-resistant isoform (PrPSc) | GGTATTGAGGGTCGCATCTCCTTTTGTTGTTTATTCTCTGTTCTCTGTTCCTGTACTCTTTATCCGATGGCTCTAACTCTCCTCT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 18 nM, 18 |
https://pubmed.ncbi.nlm.nih.gov/17931589/ | ssDNA | 10.10 | Anthracyclines daunomycin and doxorubicin | GGGAATTCGAGCTCGGTACCATCTGTGTAAGGGGTAAGGGGTGGGGGTGGGTACGTCTAGCTGCAGGCATGCAAGCTTGG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 20 nM, 20 |
https://pubmed.ncbi.nlm.nih.gov/17931589/ | ssDNA | 10.10q aptamer | Daunomycin | AGGGGTAAGGGGTGGGGGTGGGT | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Not Mentioned in Database |
https://pubmed.ncbi.nlm.nih.gov/18279908/ | ssDNA | S1 | Recombinant human 14-3-3 gamma (14-3-3γ) | CCGAAGCTTAATACGACTCACTATAGGGATCCGCCTGATTAGCGATACTAGCGCCGGTGGTGGGGGTTGTTGTTACGCGGTATTATACTTGAGCAAAATCACCTGCAGGGG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 5.4 μM, 5400 |
https://pubmed.ncbi.nlm.nih.gov/18279908/ | ssDNA | S2 | Recombinant human 14-3-3 gamma (14-3-3γ) | CCGAAGCTTAATACGACTCACTATAGGGATCCGCCTGATTAGCGATACTCGAGGCGTGTGCAAGGCGTGTTGTTCAAAGGTGTGTGTGTACTTGAGCAAAATCACCTGCAGGGG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 0.56 μM, 560 |
https://pubmed.ncbi.nlm.nih.gov/18177018/ | ssDNA | TLS1 | Liver cancer cell line BNL 1ME A.7R.1 (MEAR) (T-cell acute lymphoblastic leukemia cell line, CCRF-CEM) | ACGCTCGGATGCCACTACAGAGTGATGGTTGTTATCTGGCCTCAGAGGTTCTCGGGTGTGGTCACTCATGGACGTGCTGGTGAC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 10.34\u2009±\u20090.96 nM, 10,34 |
https://pubmed.ncbi.nlm.nih.gov/18177018/ | ssDNA | TLS1c | Liver cancer cell line BNL 1ME A.7R.1 (MEAR) (T-cell acute lymphoblastic leukemia cell line, CCRF-CEM) | ACAGGAGTGATGGTTGTTATCTGGCCTCAGAGGTTCTCGGGTGTGGTCACTCCTG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 9.79\u2009±\u20090.30 nM, 9,79 |
https://pubmed.ncbi.nlm.nih.gov/18177018/ | ssDNA | TLS3 | Liver cancer cell line BNL 1ME A.7R.1 (MEAR) (T-cell acute lymphoblastic leukemia cell line, CCRF-CEM) | ACGCTCGGATGCCACTACAGTGGGAATATTAGTACCGTTATTCGGACTCCGCCATGACAATCTGGCTCATGGACGTGCTGGTGAC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 10.9\u2009±\u20091.8 nM, 10,9 |
https://pubmed.ncbi.nlm.nih.gov/18177018/ | ssDNA | TLS4 | Liver cancer cell line BNL 1ME A.7R.1 (MEAR) (T-cell acute lymphoblastic leukemia cell line, CCRF-CEM) | ACGCTCGGATGCCACTACAGACGGTGGTCGTACACGGCCATTTTATTCCCGGAATATTTGTCAACCTCATGGACGTGCTGGTGAC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 33.9\u2009±\u20092.3 nM, 33,9 |
https://pubmed.ncbi.nlm.nih.gov/18177018/ | ssDNA | TLS6 | Liver cancer cell line BNL 1ME A.7R.1 (MEAR) (T-cell acute lymphoblastic leukemia cell line, CCRF-CEM) | ACGCTCGGATGCCACTACAGATACGGCCTGGGTCTTTATTCGCCCCGAATATTTCTTAACGTCGGCTCATGGACGTGCTGGTGAC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 157.0\u2009±\u200916.9 nM, 157 |
https://pubmed.ncbi.nlm.nih.gov/18177018/ | ssDNA | TLS7 | Liver cancer cell line BNL 1ME A.7R.1 (MEAR) (T-cell acute lymphoblastic leukemia cell line, CCRF-CEM) | ACGCTCGGATGCCACTACAGTGCGCCCAAAGTTCCCATATTGCTTCCCTGTTGGTGAGTGCCGATCTCATGGACGTGCTGGTGAC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 68.1\u2009±\u20097.6 nM, 68,1 |
https://pubmed.ncbi.nlm.nih.gov/18177018/ | ssDNA | TLS9a | Liver cancer cell line BNL 1ME A.7R.1 (MEAR) (T-cell acute lymphoblastic leukemia cell line, CCRF-CEM) | AGTCCATTTTATTCCTGAATATTTGTTAACCTCATGGAC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 7.38\u2009±\u20090.28 nM, 7,38 |
https://pubmed.ncbi.nlm.nih.gov/18177018/ | ssDNA | TLS11a | Liver cancer cell line BNL 1ME A.7R.1 (MEAR) (T-cell acute lymphoblastic leukemia cell line, CCRF-CEM) | ACAGCATCCCCATGTGAACAATCGCATTGTGATTGTTACGGTTTCCGCCTCATGGACGTGCTG | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 4.51\u2009±\u20090.39 nM, 4,51 |
https://pubmed.ncbi.nlm.nih.gov/18763762/ | ssDNA | 85B | Fibrinogen | CCTTCGTTGTCTGCCTTCGTTAGGACCGCAGACATCGACGCAGGGAAATTCCGCAAGTCCAGCCAAATGCCACCCTTCAGAATTCGCACCA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 6.4±0.81 nM, 6,4 |
https://pubmed.ncbi.nlm.nih.gov/18763762/ | ssDNA | 85C | Fibrinogen | CCTTCGTTGTCTGCCTTCGTAGTCGACTCTGACGCATGGACGTATCCTGTGCGTATGCATTATGAAGCACACCCTTCAGAATTCGCACCA | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 17.1±2.1 nM, 17,1 |
https://pubmed.ncbi.nlm.nih.gov/18230760/ | ssRNA | C13 | G-protein-coupled receptor kinase 2 (GRK2) | CUGCAGUUCGGGUAGCACAGACCAUACGGGAGAGAAACUUGUGCAACCCGGGGCUAC | https://sites.utexas.edu/aptamerdatabase/ | null | null | null | Kd: 78.2 nM ± 2.6 nM, 78,2 |
Subsets and Splits
No community queries yet
The top public SQL queries from the community will appear here once available.