| license: mit | |
| library_name: pytorch | |
| tags: | |
| - protein-sequence-generation | |
| - flow-matching | |
| - bioinformatics | |
| - protein-language-models | |
| - pfam | |
| # LineageFlow RP55 Checkpoint | |
| This repository hosts the released LineageFlow checkpoint for family-aware protein sequence generation. | |
| ## Files | |
| - `lineageflow-rp55.ckpt`: LineageFlow denoiser checkpoint. | |
| - `SHA256SUMS`: checksum for verifying the checkpoint download. | |
| ## Usage | |
| ```bash | |
| hf download jinxbye/LineageFlow \ | |
| lineageflow-rp55.ckpt \ | |
| --local-dir checkpoints | |
| ``` | |
| See the GitHub repository for inference and evaluation code: | |
| ```text | |
| https://github.com/jinxbye/LineageFlow | |
| ``` | |
| ## Citation | |
| ```bibtex | |
| @inproceedings{liang2026lineageflow, | |
| title = {LineageFlow: Flow Matching for High-Fidelity Family-Aware Protein Sequence Generation}, | |
| author = {Liang, Langzhang and Yang, Ming and Feng, Yi and Li, Junfan and Pan, Shirui and Xu, Yinghui and Ying, Tianlei and Zheng, Yizhen and Xu, Zenglin}, | |
| booktitle = {International Conference on Machine Learning}, | |
| year = {2026} | |
| } | |
| ``` | |