metadata
language:
- en
tags:
- clinicalcode
- medical-imaging
- segmentation
- ct
- mri
license: other
license_name: per-artifact-licenses
license_link: https://huggingface.co/qicq1c/ClinicalCode#licenses
ClinicalCode
Checkpoints for Animating the Clinical Source Code of Disease Progression for Medical World Models.
Project page · Code and commands
Checkpoints
| File | Function | Source |
|---|---|---|
| difftumor_hcc_fold0.pt | CT tumor segmentation within a supplied liver mask | HCC fold-0 DynUNet used in our experiments, based on DiffTumor / MeWM |
| ct_decoder.freeze.json | CT treatment-action decoding | ClinicalCode frozen Lingshu-I-8B decoder; identical to the decoder bundled with the public CT case |
| Raidionics-MRI_TumorCE_Postop-v13.zip | MRI enhancing-tumor segmentation | Unmodified Raidionics v1.3 archive |
| Raidionics-MRI_Cavity-v13.zip | MRI resection-cavity segmentation | Unmodified Raidionics v1.3 archive |
Download
python -m pip install huggingface_hub
hf download qicq1c/ClinicalCode difftumor_hcc_fold0.pt --local-dir models/difftumor
hf download qicq1c/ClinicalCode ct_decoder.freeze.json --local-dir models/decoder
hf download qicq1c/ClinicalCode \
Raidionics-MRI_TumorCE_Postop-v13.zip Raidionics-MRI_Cavity-v13.zip \
--local-dir models/raidionics/archives
unzip -q models/raidionics/archives/Raidionics-MRI_TumorCE_Postop-v13.zip -d models/raidionics
unzip -q models/raidionics/archives/Raidionics-MRI_Cavity-v13.zip -d models/raidionics
File hashes are recorded in SHA256SUMS. The frozen language models are available from their original Hugging Face repositories, including Lingshu-I-8B.
Licenses
- ClinicalCode decoder: MIT.
- HCC DynUNet checkpoint: retained with the MeWM CC BY-NC 4.0 license. Original MeWM license.
- Raidionics model archives: BSD-2-Clause, copyright David Bouget. Original model repository.
Citation
@misc{chen2026clinicalcode,
title = {Animating the Clinical Source Code of Disease Progression for Medical World Models},
author = {Chen, Qi and Yuille, Alan L. and Chen, Jieneng},
year = {2026},
url = {https://github.com/qic999/ClinicalCode}
}