dataset card
Browse files
README.md
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---
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license: other
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task_categories:
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- robotics
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tags:
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- simulation
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- isaac-sim
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- lab-automation
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- microplate
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- imitation-learning
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---
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# MagicBioLab — microplate cell (UR5e + plate gripper), simulated demonstrations
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Scripted demonstrations of a full lab-automation cycle in a simulated bio-lab enclosure:
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**conveyor carrier → plate hotel → a4S plate sealer → back onto the carrier**, with a UR5e arm and a
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parallel plate gripper. Every episode is one complete, successful cycle on one microplate.
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Data are added continuously while collection runs; `index/episodes.csv` lists every uploaded episode.
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## Layout
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```
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episodes/<episode>/
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data.npz per-frame arrays (25 Hz)
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wrist.mp4 env.mp4 640x480, 25 fps, frame-aligned with data.npz
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meta.json frame count, joint order, frames used, dr_version
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scene_snapshot.json full scene state at episode start (all DR values: lights, poses, belt speed, cameras)
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device_events.jsonl conveyor / a4S device events (station arrival, drawer, seal, release)
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index/episodes.csv one row per episode: DR parameters, plate type, length, checks, dr_version
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```
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## data.npz (T frames, 25 Hz; robot base frame)
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| key | shape | meaning |
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|---|---|---|
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| joint_pos / joint_vel | (T, 8) | 6 arm joints + 2 finger joints (m) |
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| eef_pos / eef_quat | (T, 3) / (T, 4) | gripper pose, quat wxyz |
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| gripper_pos | (T, 2) | finger positions |
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| camera_pose | (T, 2, 7) | local camera pose (wrist: in the gripper base link; env: in the env frame), pos + quat wxyz |
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| action_joint_pos | (T, 8) | **joint-position action**: commanded joint targets for the next step |
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| action_joint_delta | (T, 8) | action_joint_pos − joint_pos |
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| action_eef_pose | (T, 7) | **EEF-pose action**: forward kinematics of action_joint_pos (pos + quat wxyz) |
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| action_eef_delta | (T, 6) | EEF delta (translation + rotation vector) |
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| action_gripper | (T, 1) | finger target (m), 0.018 = open |
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| movel_goal | (T, 8) | the scripted planner's current Cartesian goal (NaN when none) |
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| tick / phase / caption | (T,) | 50 Hz control tick, task phase (12 phases), language caption |
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Open gripper = 0.018 m per finger. The simulation runs a 50 Hz control loop; every other tick is kept.
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## Cameras
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* **wrist** — on the plate gripper, looking past the fingers. Per-episode mount DR (±3 mm, ±1.5°),
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per-frame shake (OU jitter ~1.2 mm / 0.35°) and sway from the arm's acceleration.
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* **env** — top-front of the enclosure, looking down at the cell. Per-episode pose DR (±2.5 cm, ±2°); static within an episode.
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## Domain randomization (per episode)
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Lighting (ceiling rect light + a free sphere/disk key light: pose, intensity, colour temperature, colour;
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dome intensity) · 16 microplate types (SBS 6–1536 well, PCR, deep-well, reservoir; clear/black/white/coloured) ·
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plate offset (±15 / ±12 mm) and yaw (±12°) on the carrier · carrier stop position at the pick station ·
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belt speed (0.15–0.30 m/s) · arrival time of the carrier · a4S sealer pose (7 × 8 cm, ±5°) ·
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seal dwell and hand-off timing · force/torque pulses (5–20 N) on the held plate during every transfer
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(grip-stability test; the episode is discarded if the plate is lost) · camera poses (above).
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`dr_version`: **v2** episodes re-draw the wrist-camera mount, env-camera pose and a4S pose every
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episode. **v1** episodes (the first ~950) drew these three once per simulator process and environment
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(116 distinct values in v1); all other DR is per episode in both versions.
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## Quality gates (every uploaded episode)
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Task succeeded; video frame count = data frame count for both cameras; no NaN in state/action arrays;
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all 12 phases present and ending in `release`; env camera static within the episode.
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Replay of recorded actions reproduces the joint trajectories (mean 0.0003 rad) and final plate pose (2.4 mm).
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